ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal30m02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ222974.1| Hordeum vulgare temperature-induced lipocalin-1 (... 505 e-140
2gb|AY077702.1| Triticum aestivum temperature stress-induced lipo... 468 e-129
3gb|AY107141.1| Zea mays PCO144549 mRNA sequence 297 1e-77
4gb|DQ222975.1| Zea mays temperature-induced lipocalin-1 (TIL-1) ... 297 1e-77
5gb|DQ222976.1| Sorghum bicolor temperature-induced lipocalin-1 (... 274 2e-70
6gb|DQ222989.1| Saccharum officinarum temperature-induced lipocal... 250 2e-63
7ref|XM_466697.1| Oryza sativa (japonica cultivar-group), mRNA 228 9e-57
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 228 9e-57
9dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic D... 228 9e-57
10dbj|AK071108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 9e-57
11ref|XM_482610.1| Oryza sativa (japonica cultivar-group), mRNA 72 1e-09
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
13dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
14dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic D... 72 1e-09
15dbj|AK068551.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 1e-09
16dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
17gb|DQ222977.1| Triticum aestivum temperature-induced lipocalin-2... 62 1e-06
18gb|BT018327.1| Zea mays clone EL01T0208E07.c mRNA sequence 54 3e-04
19gb|AY108919.1| Zea mays PCO085164 mRNA sequence 54 3e-04
20gb|DQ222980.1| Sorghum bicolor temperature-induced lipocalin-2 (... 54 3e-04
21gb|DQ222979.1| Zea mays temperature-induced lipocalin-2 (TIL-2) ... 54 3e-04
22gb|DQ222978.1| Hordeum vulgare temperature-induced lipocalin-2 (... 54 3e-04
23ref|XM_472401.1| Oryza sativa (japonica cultivar-group), predic... 44 0.29
24emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4,... 44 0.29
25dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.29
26dbj|AK121151.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
27dbj|AK110902.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.29
28gb|DQ222998.1| Prunus armeniaca temperature-induced lipocalin (T... 44 0.29
29gb|DQ222997.1| Prunus persica temperature-induced lipocalin (TIL... 44 0.29
30gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 42 1.1
31gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.1
32gb|DQ222985.1| Mesembryanthemum crystallinum temperature-induced... 42 1.1
33ref|XM_483285.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
34gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 4.5
35gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 4.5
36gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 40 4.5
37gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 4.5
38emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.5
39gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete seq... 40 4.5
40gb|AC151727.27| Medicago truncatula clone mth2-25p23, complete s... 40 4.5
41gb|AE005987.1| Caulobacter crescentus CB15 section 313 of 359 of... 40 4.5
42gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.5
43dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
44dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
45dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
46dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
47dbj|AK107191.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
48gb|DQ222994.1| Medicago truncatula temperature-induced lipocalin... 40 4.5
49gb|DQ222990.1| Glycine max temperature-induced lipocalin (TIL) m... 40 4.5
50gb|DQ222982.1| Glycine max temperature-induced lipocalin' (TIL')... 40 4.5 
>gb|DQ222974.1| Hordeum vulgare temperature-induced lipocalin-1 (TIL-1) mRNA,
           complete cds
          Length = 573

 Score =  505 bits (255), Expect = e-140
 Identities = 255/255 (100%)
 Strand = Plus / Plus

                                                                       
Query: 85  atggcggtcaagaagatcgggagcgagatgggcgtggtgctggggctggacgttgcgcgg 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggcggtcaagaagatcgggagcgagatgggcgtggtgctggggctggacgttgcgcgg 60

                                                                       
Query: 145 tacatggggcggtggtacgagatcgcgtccttccccaacttcttccagccgcgcgacggg 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tacatggggcggtggtacgagatcgcgtccttccccaacttcttccagccgcgcgacggg 120

                                                                       
Query: 205 cgcgacacgcgggcgacctacgagctcatggaggacggcgccacggtgcacgtgctcaac 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgcgacacgcgggcgacctacgagctcatggaggacggcgccacggtgcacgtgctcaac 180

                                                                       
Query: 265 gagacgtggagcaaaggcaagcgcgactacatcgagggcaccgcctacaaggccgacccg 324
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagacgtggagcaaaggcaagcgcgactacatcgagggcaccgcctacaaggccgacccg 240

                          
Query: 325 gccagcgacgaggcc 339
           |||||||||||||||
Sbjct: 241 gccagcgacgaggcc 255
to top
>gb|AY077702.1| Triticum aestivum temperature stress-induced lipocalin (Tatil)
           mRNA, complete cds
          Length = 856

 Score =  468 bits (236), Expect = e-129
 Identities = 260/268 (97%)
 Strand = Plus / Plus

                                                                       
Query: 72  gcggcgatcgacaatggcggtcaagaagatcgggagcgagatgggcgtggtgctggggct 131
           |||||||| ||| ||||||| |||||||| ||||||||| ||||||||||||||||||||
Sbjct: 102 gcggcgatagacgatggcggccaagaagagcgggagcgaaatgggcgtggtgctggggct 161

                                                                       
Query: 132 ggacgttgcgcggtacatggggcggtggtacgagatcgcgtccttccccaacttcttcca 191
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ggacgttgcgcggtacatggggcggtggtacgagatcgcgtccttccccaacttcttcca 221

                                                                       
Query: 192 gccgcgcgacgggcgcgacacgcgggcgacctacgagctcatggaggacggcgccacggt 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gccgcgcgacgggcgcgacacgcgggcgacctacgagctcatggaggacggcgccacggt 281

                                                                       
Query: 252 gcacgtgctcaacgagacgtggagcaaaggcaagcgcgactacatcgagggcaccgccta 311
           |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 282 gcacgtgctcaacgagacgtggagcaaagggaagcgcgacttcatcgagggcaccgccta 341

                                       
Query: 312 caaggccgacccggccagcgacgaggcc 339
           ||||||||||||||||||||| ||||||
Sbjct: 342 caaggccgacccggccagcgaggaggcc 369
to top
>gb|AY107141.1| Zea mays PCO144549 mRNA sequence
          Length = 1065

 Score =  297 bits (150), Expect = 1e-77
 Identities = 204/222 (91%)
 Strand = Plus / Plus

                                                                       
Query: 118 gtggtgctggggctggacgttgcgcggtacatggggcggtggtacgagatcgcgtccttc 177
           ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 211 gtggtgcgggggctggacgtggcgcggtacatggggcggtggtacgagatcgcgtcgttc 270

                                                                       
Query: 178 cccaacttcttccagccgcgcgacgggcgcgacacgcgggcgacctacgagctcatggag 237
           ||   ||||||||||||||| ||||| ||||||||||| || ||||||  |||  |||||
Sbjct: 271 ccgtccttcttccagccgcgggacggccgcgacacgcgcgccacctaccggctgctggag 330

                                                                       
Query: 238 gacggcgccacggtgcacgtgctcaacgagacgtggagcaaaggcaagcgcgactacatc 297
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 331 gacggcgccacggtgcacgtgctcaacgagacgtggagcaagggcaagcgcgactacatc 390

                                                     
Query: 298 gagggcaccgcctacaaggccgacccggccagcgacgaggcc 339
           |||||||| ||||||||||||||||| | |||||||||||||
Sbjct: 391 gagggcacggcctacaaggccgaccccggcagcgacgaggcc 432
to top
>gb|DQ222975.1| Zea mays temperature-induced lipocalin-1 (TIL-1) mRNA, complete cds
          Length = 597

 Score =  297 bits (150), Expect = 1e-77
 Identities = 204/222 (91%)
 Strand = Plus / Plus

                                                                       
Query: 118 gtggtgctggggctggacgttgcgcggtacatggggcggtggtacgagatcgcgtccttc 177
           ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 58  gtggtgcgggggctggacgtggcgcggtacatggggcggtggtacgagatcgcgtcgttc 117

                                                                       
Query: 178 cccaacttcttccagccgcgcgacgggcgcgacacgcgggcgacctacgagctcatggag 237
           ||   ||||||||||||||| ||||| ||||||||||| || ||||||  |||  |||||
Sbjct: 118 ccgtccttcttccagccgcgggacggccgcgacacgcgcgccacctaccggctgctggag 177

                                                                       
Query: 238 gacggcgccacggtgcacgtgctcaacgagacgtggagcaaaggcaagcgcgactacatc 297
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 178 gacggcgccacggtgcacgtgctcaacgagacgtggagcaagggcaagcgcgactacatc 237

                                                     
Query: 298 gagggcaccgcctacaaggccgacccggccagcgacgaggcc 339
           |||||||| ||||||||||||||||| | |||||||||||||
Sbjct: 238 gagggcacggcctacaaggccgaccccggcagcgacgaggcc 279
to top
>gb|DQ222976.1| Sorghum bicolor temperature-induced lipocalin-1 (TIL-1) mRNA,
           complete cds
          Length = 606

 Score =  274 bits (138), Expect = 2e-70
 Identities = 201/222 (90%)
 Strand = Plus / Plus

                                                                       
Query: 118 gtggtgctggggctggacgttgcgcggtacatggggcggtggtacgagatcgcgtccttc 177
           ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 67  gtggtgcggggcctggacgtggcgcggtacatggggcggtggtacgagatcgcgtcgttc 126

                                                                       
Query: 178 cccaacttcttccagccgcgcgacgggcgcgacacgcgggcgacctacgagctcatggag 237
           ||   |||||||||||| || |||||||| |||||||| || ||||||  |||  |||||
Sbjct: 127 ccgtccttcttccagccccgggacgggcgggacacgcgcgccacctaccggctgctggag 186

                                                                       
Query: 238 gacggcgccacggtgcacgtgctcaacgagacgtggagcaaaggcaagcgcgactacatc 297
           |||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||
Sbjct: 187 gacggcgccacggtgcacgtcctcaacgagacgtggagcaaggggaagcgcgactacatc 246

                                                     
Query: 298 gagggcaccgcctacaaggccgacccggccagcgacgaggcc 339
           |||||||||||||||||||||||||||  |||||||||||||
Sbjct: 247 gagggcaccgcctacaaggccgacccgaacagcgacgaggcc 288
to top
>gb|DQ222989.1| Saccharum officinarum temperature-induced lipocalin (TIL) mRNA,
           complete cds
          Length = 582

 Score =  250 bits (126), Expect = 2e-63
 Identities = 198/222 (89%)
 Strand = Plus / Plus

                                                                       
Query: 118 gtggtgctggggctggacgttgcgcggtacatggggcggtggtacgagatcgcgtccttc 177
           ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 43  gtggtgcggggcctggacgtggcgcggtacatggggcggtggtacgagatcgcgtcgttc 102

                                                                       
Query: 178 cccaacttcttccagccgcgcgacgggcgcgacacgcgggcgacctacgagctcatggag 237
           ||   |||||||||||| || ||||| || |||||||| || ||||||  |||  |||||
Sbjct: 103 ccgtccttcttccagccccgggacggccgggacacgcgcgccacctaccggctgctggag 162

                                                                       
Query: 238 gacggcgccacggtgcacgtgctcaacgagacgtggagcaaaggcaagcgcgactacatc 297
           |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 163 gacggcgccacggtgcacgtcctcaacgagacgtggagcaagggcaagcgcgactacatc 222

                                                     
Query: 298 gagggcaccgcctacaaggccgacccggccagcgacgaggcc 339
           |||||||| ||||||||||||||| |   |||||||||||||
Sbjct: 223 gagggcacggcctacaaggccgacgccagcagcgacgaggcc 264
to top
>ref|XM_466697.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 956

 Score =  228 bits (115), Expect = 9e-57
 Identities = 216/249 (86%), Gaps = 3/249 (1%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagaagatcgggagcgagatgggcgtggtgctggggctggacgttgcgcggtacatgggg 153
           ||||||| |||||||||||||   ||||||| |||||||||||| ||| |||||||||| 
Sbjct: 204 aagaagagcgggagcgagatgacggtggtgcgggggctggacgtggcgaggtacatgggc 263

                                                                       
Query: 154 cggtggtacgagatcgcgtccttccccaacttcttccagccgcgcgacgggcgcgacacg 213
           ||||||||||||||||||||  | ||||||||||||||||| || ||||| || ||||||
Sbjct: 264 cggtggtacgagatcgcgtcgctgcccaacttcttccagccccgggacggccgggacacg 323

                                                                       
Query: 214 cgggcgacctacgagctcatggaggacggcgccacggtgcacgtgctcaacgagacgtgg 273
           |||||||| |||| |||   |   |||||||| |||||| ||||||| ||||||||||||
Sbjct: 324 cgggcgacgtacgcgctgcggcccgacggcgcgacggtggacgtgctgaacgagacgtgg 383

                                                                       
Query: 274 ---agcaaaggcaagcgcgactacatcgagggcaccgcctacaaggccgacccggccagc 330
              ||||  || ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 384 accagcagcgggaagcgcgactacatcaagggcaccgcctacaaggccgacccggccagc 443

                    
Query: 331 gacgaggcc 339
           |||||||||
Sbjct: 444 gacgaggcc 452
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  228 bits (115), Expect = 9e-57
 Identities = 216/249 (86%), Gaps = 3/249 (1%)
 Strand = Plus / Minus

                                                                            
Query: 94       aagaagatcgggagcgagatgggcgtggtgctggggctggacgttgcgcggtacatgggg 153
                ||||||| |||||||||||||   ||||||| |||||||||||| ||| |||||||||| 
Sbjct: 24172264 aagaagagcgggagcgagatgacggtggtgcgggggctggacgtggcgaggtacatgggc 24172205

                                                                            
Query: 154      cggtggtacgagatcgcgtccttccccaacttcttccagccgcgcgacgggcgcgacacg 213
                ||||||||||||||||||||  | ||||||||||||||||| || ||||| || ||||||
Sbjct: 24172204 cggtggtacgagatcgcgtcgctgcccaacttcttccagccccgggacggccgggacacg 24172145

                                                                            
Query: 214      cgggcgacctacgagctcatggaggacggcgccacggtgcacgtgctcaacgagacgtgg 273
                |||||||| |||| |||   |   |||||||| |||||| ||||||| ||||||||||||
Sbjct: 24172144 cgggcgacgtacgcgctgcggcccgacggcgcgacggtggacgtgctgaacgagacgtgg 24172085

                                                                            
Query: 274      ---agcaaaggcaagcgcgactacatcgagggcaccgcctacaaggccgacccggccagc 330
                   ||||  || ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 24172084 accagcagcgggaagcgcgactacatcaagggcaccgcctacaaggccgacccggccagc 24172025

                         
Query: 331      gacgaggcc 339
                |||||||||
Sbjct: 24172024 gacgaggcc 24172016
to top
>dbj|AP005286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1004_A05
          Length = 174290

 Score =  228 bits (115), Expect = 9e-57
 Identities = 216/249 (86%), Gaps = 3/249 (1%)
 Strand = Plus / Minus

                                                                          
Query: 94     aagaagatcgggagcgagatgggcgtggtgctggggctggacgttgcgcggtacatgggg 153
              ||||||| |||||||||||||   ||||||| |||||||||||| ||| |||||||||| 
Sbjct: 131005 aagaagagcgggagcgagatgacggtggtgcgggggctggacgtggcgaggtacatgggc 130946

                                                                          
Query: 154    cggtggtacgagatcgcgtccttccccaacttcttccagccgcgcgacgggcgcgacacg 213
              ||||||||||||||||||||  | ||||||||||||||||| || ||||| || ||||||
Sbjct: 130945 cggtggtacgagatcgcgtcgctgcccaacttcttccagccccgggacggccgggacacg 130886

                                                                          
Query: 214    cgggcgacctacgagctcatggaggacggcgccacggtgcacgtgctcaacgagacgtgg 273
              |||||||| |||| |||   |   |||||||| |||||| ||||||| ||||||||||||
Sbjct: 130885 cgggcgacgtacgcgctgcggcccgacggcgcgacggtggacgtgctgaacgagacgtgg 130826

                                                                          
Query: 274    ---agcaaaggcaagcgcgactacatcgagggcaccgcctacaaggccgacccggccagc 330
                 ||||  || ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 130825 accagcagcgggaagcgcgactacatcaagggcaccgcctacaaggccgacccggccagc 130766

                       
Query: 331    gacgaggcc 339
              |||||||||
Sbjct: 130765 gacgaggcc 130757
to top
>dbj|AK071108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078B21, full
           insert sequence
          Length = 956

 Score =  228 bits (115), Expect = 9e-57
 Identities = 216/249 (86%), Gaps = 3/249 (1%)
 Strand = Plus / Plus

                                                                       
Query: 94  aagaagatcgggagcgagatgggcgtggtgctggggctggacgttgcgcggtacatgggg 153
           ||||||| |||||||||||||   ||||||| |||||||||||| ||| |||||||||| 
Sbjct: 204 aagaagagcgggagcgagatgacggtggtgcgggggctggacgtggcgaggtacatgggc 263

                                                                       
Query: 154 cggtggtacgagatcgcgtccttccccaacttcttccagccgcgcgacgggcgcgacacg 213
           ||||||||||||||||||||  | ||||||||||||||||| || ||||| || ||||||
Sbjct: 264 cggtggtacgagatcgcgtcgctgcccaacttcttccagccccgggacggccgggacacg 323

                                                                       
Query: 214 cgggcgacctacgagctcatggaggacggcgccacggtgcacgtgctcaacgagacgtgg 273
           |||||||| |||| |||   |   |||||||| |||||| ||||||| ||||||||||||
Sbjct: 324 cgggcgacgtacgcgctgcggcccgacggcgcgacggtggacgtgctgaacgagacgtgg 383

                                                                       
Query: 274 ---agcaaaggcaagcgcgactacatcgagggcaccgcctacaaggccgacccggccagc 330
              ||||  || ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 384 accagcagcgggaagcgcgactacatcaagggcaccgcctacaaggccgacccggccagc 443

                    
Query: 331 gacgaggcc 339
           |||||||||
Sbjct: 444 gacgaggcc 452
to top
>ref|XM_482610.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 860

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 256 gtgctcaacgagacgtggagcaaaggcaagcgcgactacatcgagggcaccgcctacaag 315
           ||||||||||||||||||| | | |||   |||| | ||||||||||||||||||||   
Sbjct: 236 gtgctcaacgagacgtggaccgacggccgccgcggccacatcgagggcaccgcctaccgc 295

                                   
Query: 316 gccgacccggccagcgacgaggcc 339
           |||||||||| |||||||||||||
Sbjct: 296 gccgacccggtcagcgacgaggcc 319



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                  
Query: 141 gcggtacatggggcggtggtacgagatcgcgtccttccc 179
           |||||||||||||||||||||||||||||||| ||||||
Sbjct: 124 gcggtacatggggcggtggtacgagatcgcgtgcttccc 162
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                            
Query: 256      gtgctcaacgagacgtggagcaaaggcaagcgcgactacatcgagggcaccgcctacaag 315
                ||||||||||||||||||| | | |||   |||| | ||||||||||||||||||||   
Sbjct: 21400486 gtgctcaacgagacgtggaccgacggccgccgcggccacatcgagggcaccgcctaccgc 21400545

                                        
Query: 316      gccgacccggccagcgacgaggcc 339
                |||||||||| |||||||||||||
Sbjct: 21400546 gccgacccggtcagcgacgaggcc 21400569



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                       
Query: 141      gcggtacatggggcggtggtacgagatcgcgtccttccc 179
                |||||||||||||||||||||||||||||||| ||||||
Sbjct: 21400374 gcggtacatggggcggtggtacgagatcgcgtgcttccc 21400412



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 116      gcgtggtgctggggctggac 135
                ||||||||||||||||||||
Sbjct: 25267609 gcgtggtgctggggctggac 25267628
to top
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0528B09
          Length = 156897

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                        
Query: 256  gtgctcaacgagacgtggagcaaaggcaagcgcgactacatcgagggcaccgcctacaag 315
            ||||||||||||||||||| | | |||   |||| | ||||||||||||||||||||   
Sbjct: 4481 gtgctcaacgagacgtggaccgacggccgccgcggccacatcgagggcaccgcctaccgc 4540

                                    
Query: 316  gccgacccggccagcgacgaggcc 339
            |||||||||| |||||||||||||
Sbjct: 4541 gccgacccggtcagcgacgaggcc 4564



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                   
Query: 141  gcggtacatggggcggtggtacgagatcgcgtccttccc 179
            |||||||||||||||||||||||||||||||| ||||||
Sbjct: 4369 gcggtacatggggcggtggtacgagatcgcgtgcttccc 4407
to top
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0524F03
          Length = 167696

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                          
Query: 256    gtgctcaacgagacgtggagcaaaggcaagcgcgactacatcgagggcaccgcctacaag 315
              ||||||||||||||||||| | | |||   |||| | ||||||||||||||||||||   
Sbjct: 100411 gtgctcaacgagacgtggaccgacggccgccgcggccacatcgagggcaccgcctaccgc 100470

                                      
Query: 316    gccgacccggccagcgacgaggcc 339
              |||||||||| |||||||||||||
Sbjct: 100471 gccgacccggtcagcgacgaggcc 100494



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                     
Query: 141    gcggtacatggggcggtggtacgagatcgcgtccttccc 179
              |||||||||||||||||||||||||||||||| ||||||
Sbjct: 100299 gcggtacatggggcggtggtacgagatcgcgtgcttccc 100337
to top
>dbj|AK068551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155M04, full
           insert sequence
          Length = 860

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 256 gtgctcaacgagacgtggagcaaaggcaagcgcgactacatcgagggcaccgcctacaag 315
           ||||||||||||||||||| | | |||   |||| | ||||||||||||||||||||   
Sbjct: 236 gtgctcaacgagacgtggaccgacggccgccgcggccacatcgagggcaccgcctaccgc 295

                                   
Query: 316 gccgacccggccagcgacgaggcc 339
           |||||||||| |||||||||||||
Sbjct: 296 gccgacccggtcagcgacgaggcc 319



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 38/39 (97%)
 Strand = Plus / Plus

                                                  
Query: 141 gcggtacatggggcggtggtacgagatcgcgtccttccc 179
           |||||||||||||||||||||||||||||||| ||||||
Sbjct: 124 gcggtacatggggcggtggtacgagatcgcgtgcttccc 162
to top
>dbj|AK105927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-A10, full
            insert sequence
          Length = 2135

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Plus

                                                           
Query: 293  acatcgagggcaccgcctacaaggccgacccggccagcgacgaggcc 339
            ||||||||||||||||||||   |||||||||| |||||||||||||
Sbjct: 1217 acatcgagggcaccgcctaccgcgccgacccggtcagcgacgaggcc 1263
to top
>gb|DQ222977.1| Triticum aestivum temperature-induced lipocalin-2 (TIL-2) mRNA,
           complete cds
          Length = 549

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 141 gcggtacatggggcggtggtacgagatcgcgtccttccc 179
           |||||||||||| ||||||||||||||||||| ||||||
Sbjct: 39  gcggtacatgggccggtggtacgagatcgcgtgcttccc 77



 Score = 46.1 bits (23), Expect = 0.073
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 293 acatcgagggcaccgcctacaaggccgacccggccagcgacgaggcc 339
           |||||||||||||||||| |   |||||||| ||| |||||||||||
Sbjct: 188 acatcgagggcaccgccttccgcgccgaccccgccggcgacgaggcc 234
to top
>gb|BT018327.1| Zea mays clone EL01T0208E07.c mRNA sequence
          Length = 751

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 141 gcggtacatggggcggtggtacgagatcgcgtccttccc 179
           |||||||  ||||||||||||||||||||||| ||||||
Sbjct: 7   gcggtacgcggggcggtggtacgagatcgcgtgcttccc 45



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 316 gccgacccggccagcgacgaggcc 339
           |||||||| |||||||||||||||
Sbjct: 179 gccgaccctgccagcgacgaggcc 202
to top
>gb|AY108919.1| Zea mays PCO085164 mRNA sequence
          Length = 822

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 141 gcggtacatggggcggtggtacgagatcgcgtccttccc 179
           |||||||  ||||||||||||||||||||||| ||||||
Sbjct: 131 gcggtacgcggggcggtggtacgagatcgcgtgcttccc 169



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 316 gccgacccggccagcgacgaggcc 339
           |||||||| |||||||||||||||
Sbjct: 303 gccgaccctgccagcgacgaggcc 326
to top
>gb|DQ222980.1| Sorghum bicolor temperature-induced lipocalin-2 (TIL-2) mRNA,
           complete cds
          Length = 564

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 141 gcggtacatggggcggtggtacgagatcgcgtccttccc 179
           |||||||  ||||||||||||||||||||||| ||||||
Sbjct: 45  gcggtacgcggggcggtggtacgagatcgcgtgcttccc 83



 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 316 gccgacccggccagcgacgaggcc 339
           ||||||||||||||||||||||||
Sbjct: 226 gccgacccggccagcgacgaggcc 249
to top
>gb|DQ222979.1| Zea mays temperature-induced lipocalin-2 (TIL-2) mRNA, complete cds
          Length = 546

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 141 gcggtacatggggcggtggtacgagatcgcgtccttccc 179
           |||||||  ||||||||||||||||||||||| ||||||
Sbjct: 36  gcggtacgcggggcggtggtacgagatcgcgtgcttccc 74



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 316 gccgacccggccagcgacgaggcc 339
           |||||||| |||||||||||||||
Sbjct: 208 gccgaccctgccagcgacgaggcc 231
to top
>gb|DQ222978.1| Hordeum vulgare temperature-induced lipocalin-2 (TIL-2) mRNA,
           complete cds
          Length = 549

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 141 gcggtacatggggcggtggtacgagatcgcgtccttccc 179
           ||||||||||||  |||||||||||||||||| ||||||
Sbjct: 39  gcggtacatgggcaggtggtacgagatcgcgtgcttccc 77
to top
>ref|XM_472401.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1224

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 306 cgcctacaaggccgacccggccagcg 331
           |||||||||||||||||||| |||||
Sbjct: 657 cgcctacaaggccgacccgggcagcg 682
to top
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04,
              complete sequence
          Length = 143301

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 306    cgcctacaaggccgacccggccagcg 331
              |||||||||||||||||||| |||||
Sbjct: 115811 cgcctacaaggccgacccgggcagcg 115836
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 306      cgcctacaaggccgacccggccagcg 331
                |||||||||||||||||||| |||||
Sbjct: 20385178 cgcctacaaggccgacccgggcagcg 20385203
to top
>dbj|AK121151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078I08, full
           insert sequence
          Length = 1981

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 306 cgcctacaaggccgacccggccagcg 331
           |||||||||||||||||||| |||||
Sbjct: 799 cgcctacaaggccgacccgggcagcg 824
to top
>dbj|AK110902.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-B03, full
            insert sequence
          Length = 1598

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 306  cgcctacaaggccgacccggccagcg 331
            |||||||||||||||||||| |||||
Sbjct: 1033 cgcctacaaggccgacccgggcagcg 1058
to top
>gb|DQ222998.1| Prunus armeniaca temperature-induced lipocalin (TIL) mRNA, complete
           cds
          Length = 558

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 298 gagggcaccgcctacaaggccgacccggccagcgacgaggcc 339
           |||||||| || ||||||||||||||  ||||||| ||||||
Sbjct: 199 gagggcactgcatacaaggccgacccctccagcgaagaggcc 240



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 143 ggtacatggggcggtggtacgagat 167
           ||||||||||||| |||||||||||
Sbjct: 47  ggtacatggggcgctggtacgagat 71
to top
>gb|DQ222997.1| Prunus persica temperature-induced lipocalin (TIL) mRNA, complete
           cds
          Length = 558

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 298 gagggcaccgcctacaaggccgacccggccagcgacgaggcc 339
           |||||||| || ||||||||||||||  ||||||| ||||||
Sbjct: 199 gagggcactgcatacaaggccgacccctccagcgaagaggcc 240



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 143 ggtacatggggcggtggtacgagat 167
           ||||||||||||| |||||||||||
Sbjct: 47  ggtacatggggcgctggtacgagat 71
to top
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 138    tgcgcggtacatggggcggtg 158
              |||||||||||||||||||||
Sbjct: 888714 tgcgcggtacatggggcggtg 888694



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 251     tgcacgtgctcaacgagacg 270
               ||||||||||||||||||||
Sbjct: 2142910 tgcacgtgctcaacgagacg 2142929
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 114     gggcgtggtgctggggctgga 134
               |||||||||||||||||||||
Sbjct: 4322674 gggcgtggtgctggggctgga 4322694
to top
>gb|DQ222985.1| Mesembryanthemum crystallinum temperature-induced lipocalin' (TIL')
           mRNA, complete cds
          Length = 564

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 147 catggggcggtggtacgagat 167
           |||||||||||||||||||||
Sbjct: 57  catggggcggtggtacgagat 77
to top
>ref|XM_483285.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1624

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 116  gcgtggtgctggggctggac 135
            ||||||||||||||||||||
Sbjct: 1314 gcgtggtgctggggctggac 1295
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 194     cgcgcgacgggcgcgacacgcgggcgac 221
               ||||| ||||||||||| ||||||||||
Sbjct: 1610163 cgcgcaacgggcgcgacgcgcgggcgac 1610190
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 240     cggcgccacggtgcacgtgctcaa 263
               ||||||||||||||||||| ||||
Sbjct: 1530878 cggcgccacggtgcacgtgttcaa 1530901
to top
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     agcgcgcggcgatcgacaat 86
              ||||||||||||||||||||
Sbjct: 132129 agcgcgcggcgatcgacaat 132110
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 315     ggccgacccggccagcgacg 334
               ||||||||||||||||||||
Sbjct: 2114650 ggccgacccggccagcgacg 2114669
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 194     cgcgcgacgggcgcgacacgcgggcgac 221
               ||||| ||||||||||| ||||||||||
Sbjct: 1497300 cgcgcaacgggcgcgacgcgcgggcgac 1497327
to top
>gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete sequence
          Length = 129518

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 145   tacatggggcggtggtacgagatcgcgt 172
             |||||||| |||||||||||||| ||||
Sbjct: 61133 tacatgggtcggtggtacgagatagcgt 61160
to top
>gb|AC151727.27| Medicago truncatula clone mth2-25p23, complete sequence
          Length = 123526

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 145   tacatggggcggtggtacgagatcgcgt 172
             |||||||| |||||||||||||| ||||
Sbjct: 18981 tacatgggtcggtggtacgagatagcgt 19008
to top
>gb|AE005987.1| Caulobacter crescentus CB15 section 313 of 359 of the complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 192  gccgcgcgacgggcgcgacacgcg 215
            ||||||||||||||||| ||||||
Sbjct: 1014 gccgcgcgacgggcgcgtcacgcg 991
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 311     acaaggccgacccggccagcgacg 334
               ||||||||| ||||||||||||||
Sbjct: 2188039 acaaggccggcccggccagcgacg 2188062
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 67      agcgcgcggcgatcgacaat 86
               ||||||||||||||||||||
Sbjct: 8168008 agcgcgcggcgatcgacaat 8167989
to top
>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0034C11
          Length = 139399

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    agcgcgcggcgatcgacaat 86
             ||||||||||||||||||||
Sbjct: 85726 agcgcgcggcgatcgacaat 85707
to top
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1168A08
          Length = 138135

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    gcgtggtgctggggctggac 135
              ||||||||||||||||||||
Sbjct: 132732 gcgtggtgctggggctggac 132751
to top
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0016N23
          Length = 147336

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   gcgtggtgctggggctggac 135
             ||||||||||||||||||||
Sbjct: 42794 gcgtggtgctggggctggac 42813
to top
>dbj|AK107191.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-A04, full
            insert sequence
          Length = 1624

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 116  gcgtggtgctggggctggac 135
            ||||||||||||||||||||
Sbjct: 1314 gcgtggtgctggggctggac 1295
to top
>gb|DQ222994.1| Medicago truncatula temperature-induced lipocalin (TIL) mRNA,
           complete cds
          Length = 555

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 145 tacatggggcggtggtacgagatcgcgt 172
           |||||||| |||||||||||||| ||||
Sbjct: 49  tacatgggtcggtggtacgagatagcgt 76
to top
>gb|DQ222990.1| Glycine max temperature-induced lipocalin (TIL) mRNA, complete cds
          Length = 555

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 250 gtgcacgtgctcaacgagacgtggagcaaaggcaag 285
           ||||| |||||||||||||| ||||| || ||||||
Sbjct: 151 gtgcaagtgctcaacgagacttggagtaatggcaag 186
to top
>gb|DQ222982.1| Glycine max temperature-induced lipocalin' (TIL') mRNA, complete
           cds
          Length = 555

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 250 gtgcacgtgctcaacgagacgtggagcaaaggcaag 285
           ||||| |||||||||||||| ||||| || ||||||
Sbjct: 151 gtgcaagtgctcaacgagacttggagtaatggcaag 186


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,904,118
Number of Sequences: 3902068
Number of extensions: 1904118
Number of successful extensions: 37820
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 36914
Number of HSP's gapped (non-prelim): 897
length of query: 339
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 317
effective length of database: 17,147,199,772
effective search space: 5435662327724
effective search space used: 5435662327724
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top