ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal31b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome... 182 8e-43
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 182 8e-43
3ref|NM_191978.1| Oryza sativa (japonica cultivar-group), predic... 54 5e-04
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
5dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
6dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
7dbj|AK101605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
8emb|Z83120.1|CER06A4 Caenorhabditis elegans Cosmid R06A4, comple... 44 0.48
9ref|NM_064583.2| Caenorhabditis elegans R06A4.8 (R06A4.8) mRNA, ... 44 0.48
10ref|XM_362886.1| Magnaporthe grisea 70-15 predicted protein (MG0... 42 1.9
11ref|NM_119690.1| Arabidopsis thaliana unknown protein AT4G35240 ... 40 7.4
12gb|AC154025.12| Mus musculus 6 BAC RP24-539J4 (Roswell Park Canc... 40 7.4
13gb|AC073297.5| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.4
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.4
15gb|AC144948.3| Mus musculus BAC clone RP23-119D7 from chromosome... 40 7.4
16emb|X61638.1|HSWIGEX10 Human Wilms tumor gene 1, exon 10 40 7.4
17gb|DQ083333.1| Danio rerio iron regulatory protein 2 mRNA, parti... 40 7.4
18emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 ... 40 7.4
19emb|AL356218.22| Human DNA sequence from clone RP11-311H10 on ch... 40 7.4
20emb|AL049692.13|HSDJ74J1 Human DNA sequence from clone RP1-74J1 ... 40 7.4
21emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, ... 40 7.4
22emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, B... 40 7.4
23emb|BX296538.9| Zebrafish DNA sequence from clone DKEY-275P19 in... 40 7.4
24gb|AC097062.2| Homo sapiens chromosome 1 clone RP11-428D12, comp... 40 7.4
25gb|AC097469.2| Homo sapiens BAC clone RP11-55N4 from 4, complete... 40 7.4
26gb|AC092390.3| Oryza sativa chromosome 3 BAC OSJNBb0013K08 genom... 40 7.4
27emb|CR389803.1| Gallus gallus finished cDNA, clone ChEST273n21 40 7.4
28gb|DQ083949.1| Homo sapiens aquaporin 3 (AQP3) gene, complete cds 40 7.4
29gb|AC092226.1|AC092226 Drosophila melanogaster, chromosome 2L, r... 40 7.4
30dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
31gb|AY245105.1| Homo sapiens Wilms tumor 1 (WT1) gene, complete cds 40 7.4
32gb|AC164654.3| Gallus gallus BAC clone CH261-5H7 from chromosome... 40 7.4
33gb|AC153642.7| Mus musculus 6 BAC RP23-334E23 (Roswell Park Canc... 40 7.4
34gb|AE003630.2| Drosophila melanogaster chromosome 2L, section 39... 40 7.4
35gb|AC005117.1|AC005117 Drosophila melanogaster, chromosome 2L, r... 40 7.4
36emb|CR392035.10| Zebrafish DNA sequence from clone CH211-184N9 i... 40 7.4
37gb|M80232.1|HUMWT110 Human Wilms' tumor assocated protein (WT1) ... 40 7.4

>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06,
             complete sequence
          Length = 139139

 Score =  182 bits (92), Expect = 8e-43
 Identities = 242/292 (82%)
 Strand = Plus / Plus

                                                                         
Query: 41    ctgcacaaaagagtgaaggtactgccccatcagtttttatggccagggaaaatgatggca 100
             ||||||| || || ||||||||||| ||||||||| ||||| | | ||||| ||| ||||
Sbjct: 90752 ctgcacagaaaagcgaaggtactgctccatcagttcttatgacaaaggaaattgacggca 90811

                                                                         
Query: 101   gcttcccaggtgcaaaacacgagctcgcacttgtcccgctgcaccaagtaaatgctacgc 160
             || | |||| ||||||||| ||||| || ||||| || ||||| |||||||||||| | |
Sbjct: 90812 gcatgccagttgcaaaacatgagcttgcccttgtgcctctgcatcaagtaaatgctgccc 90871

                                                                         
Query: 161   agtctcctgctatgcaattccaaagttgcaacgggcttattctacagcaacttgtgcctg 220
             | ||||||||||||||||||||||||||||| |||||| |||| |||||||| || || |
Sbjct: 90872 aatctcctgctatgcaattccaaagttgcaatgggcttgttctgcagcaactggtcccag 90931

                                                                         
Query: 221   tctctttgagtacccaacaagatcagccacacttgaaccaacctactgtttaccgtacgc 280
             |||| ||||| || |||||||| ||||  ||| |||||||| | ||  | ||| ||| ||
Sbjct: 90932 tctcattgagcactcaacaagaccagcagcacatgaaccaagccaccttgtactgtatgc 90991

                                                                 
Query: 281   aaaatcaatgtcatccggagcacaggcaggcccaaacatttcaacctgcacc 332
             |||  |||  ||||   |||||||||||||||||| ||||||||||||||||
Sbjct: 90992 aaacccaagctcatgttgagcacaggcaggcccaaccatttcaacctgcacc 91043



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  182 bits (92), Expect = 8e-43
 Identities = 242/292 (82%)
 Strand = Plus / Plus

                                                                            
Query: 41       ctgcacaaaagagtgaaggtactgccccatcagtttttatggccagggaaaatgatggca 100
                ||||||| || || ||||||||||| ||||||||| ||||| | | ||||| ||| ||||
Sbjct: 27726194 ctgcacagaaaagcgaaggtactgctccatcagttcttatgacaaaggaaattgacggca 27726253

                                                                            
Query: 101      gcttcccaggtgcaaaacacgagctcgcacttgtcccgctgcaccaagtaaatgctacgc 160
                || | |||| ||||||||| ||||| || ||||| || ||||| |||||||||||| | |
Sbjct: 27726254 gcatgccagttgcaaaacatgagcttgcccttgtgcctctgcatcaagtaaatgctgccc 27726313

                                                                            
Query: 161      agtctcctgctatgcaattccaaagttgcaacgggcttattctacagcaacttgtgcctg 220
                | ||||||||||||||||||||||||||||| |||||| |||| |||||||| || || |
Sbjct: 27726314 aatctcctgctatgcaattccaaagttgcaatgggcttgttctgcagcaactggtcccag 27726373

                                                                            
Query: 221      tctctttgagtacccaacaagatcagccacacttgaaccaacctactgtttaccgtacgc 280
                |||| ||||| || |||||||| ||||  ||| |||||||| | ||  | ||| ||| ||
Sbjct: 27726374 tctcattgagcactcaacaagaccagcagcacatgaaccaagccaccttgtactgtatgc 27726433

                                                                    
Query: 281      aaaatcaatgtcatccggagcacaggcaggcccaaacatttcaacctgcacc 332
                |||  |||  ||||   |||||||||||||||||| ||||||||||||||||
Sbjct: 27726434 aaacccaagctcatgttgagcacaggcaggcccaaccatttcaacctgcacc 27726485



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>ref|NM_191978.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1986

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 205  cagcaacttgtgcctgtctctttgagtacccaacaagatcagc 247
            |||||||| ||||||||||||||||| || |||| ||||||||
Sbjct: 1009 cagcaactagtgcctgtctctttgagcacacaaccagatcagc 1051



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 205      cagcaacttgtgcctgtctctttgagtacccaacaagatcagc 247
                |||||||| ||||||||||||||||| || |||| ||||||||
Sbjct: 27625565 cagcaactagtgcctgtctctttgagcacacaaccagatcagc 27625523



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>dbj|AP003264.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485G01
          Length = 167203

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 205   cagcaacttgtgcctgtctctttgagtacccaacaagatcagc 247
             |||||||| ||||||||||||||||| || |||| ||||||||
Sbjct: 34131 cagcaactagtgcctgtctctttgagcacacaaccagatcagc 34089



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>dbj|AP003223.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0007F06
          Length = 150817

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 205   cagcaacttgtgcctgtctctttgagtacccaacaagatcagc 247
             |||||||| ||||||||||||||||| || |||| ||||||||
Sbjct: 92859 cagcaactagtgcctgtctctttgagcacacaaccagatcagc 92817



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>dbj|AK101605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051L23, full
           insert sequence
          Length = 1675

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 205 cagcaacttgtgcctgtctctttgagtacccaacaagatcagc 247
           |||||||| ||||||||||||||||| || |||| ||||||||
Sbjct: 391 cagcaactagtgcctgtctctttgagcacacaaccagatcagc 433



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>emb|Z83120.1|CER06A4 Caenorhabditis elegans Cosmid R06A4, complete sequence
          Length = 36633

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 172 atgcaattccaaagttgcaacg 193
           ||||||||||||||||||||||
Sbjct: 482 atgcaattccaaagttgcaacg 503



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>ref|NM_064583.2| Caenorhabditis elegans R06A4.8 (R06A4.8) mRNA, complete cds
          Length = 4543

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 172  atgcaattccaaagttgcaacg 193
            ||||||||||||||||||||||
Sbjct: 3946 atgcaattccaaagttgcaacg 3925



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>ref|XM_362886.1| Magnaporthe grisea 70-15 predicted protein (MG08551.4) partial cds
          Length = 1752

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 507 acaacagcagcagtaccacaacatg 531
           |||||||||||||||| ||||||||
Sbjct: 198 acaacagcagcagtacaacaacatg 222



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>ref|NM_119690.1| Arabidopsis thaliana unknown protein AT4G35240 mRNA, complete cds
          Length = 2487

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 500  aggtggcacaacagcagcag 519
            ||||||||||||||||||||
Sbjct: 1410 aggtggcacaacagcagcag 1391



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>gb|AC154025.12| Mus musculus 6 BAC RP24-539J4 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 165821

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    gcctgtctctttgagtaccc 235
              ||||||||||||||||||||
Sbjct: 146461 gcctgtctctttgagtaccc 146480



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>gb|AC073297.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-167N24, complete
             sequence
          Length = 96335

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   aggtggcacaacagcagcag 519
             ||||||||||||||||||||
Sbjct: 25730 aggtggcacaacagcagcag 25711



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 481      caacaacaaccacagcccca 500
                ||||||||||||||||||||
Sbjct: 23753649 caacaacaaccacagcccca 23753668



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>gb|AC144948.3| Mus musculus BAC clone RP23-119D7 from chromosome 6, complete sequence
          Length = 213811

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   caaacatttcaacctgcacc 332
             ||||||||||||||||||||
Sbjct: 91801 caaacatttcaacctgcacc 91820



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>emb|X61638.1|HSWIGEX10 Human Wilms tumor gene 1, exon 10
          Length = 1863

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 aacttgtgcctgtctctttg 228
           ||||||||||||||||||||
Sbjct: 173 aacttgtgcctgtctctttg 192



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>gb|DQ083333.1| Danio rerio iron regulatory protein 2 mRNA, partial cds
          Length = 740

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 495 gccccaggtggcacaacagcagcagtac 522
           ||||| ||||||| ||||||||||||||
Sbjct: 580 gcccctggtggcagaacagcagcagtac 607



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>emb|CR383667.11| Zebrafish DNA sequence from clone CH211-229P19 in linkage group 10,
             complete sequence
          Length = 121560

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 524   acaacatgcaacaagttcca 543
             ||||||||||||||||||||
Sbjct: 86467 acaacatgcaacaagttcca 86486



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>emb|AL356218.22| Human DNA sequence from clone RP11-311H10 on chromosome 9 Contains the
             3' end of the NFX1 gene for X-box binding nuclear
             transcription factor 1,  the AQP7 and AQP3 genes for
             aquaporin 7 and 3, a novel gene, the gene for nucleolar
             RNA-associated protein alpha, beta and gamma and a CpG
             island, complete sequence
          Length = 142839

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   acagtccaggatgttcactc 470
             ||||||||||||||||||||
Sbjct: 83194 acagtccaggatgttcactc 83213



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>emb|AL049692.13|HSDJ74J1 Human DNA sequence from clone RP1-74J1 on chromosome 11p13 Contains a
              gene for Wilms' tumor associated protein, the WT1 (Wilms
              tumor 1) gene, ESTs, STSs, GSSs and CpG Islands, complete
              sequence
          Length = 127580

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 209    aacttgtgcctgtctctttg 228
              ||||||||||||||||||||
Sbjct: 100208 aacttgtgcctgtctctttg 100227



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>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83
          Length = 197859

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   aggtggcacaacagcagcag 519
             ||||||||||||||||||||
Sbjct: 27365 aggtggcacaacagcagcag 27384



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>emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, BAC clone  F23E12 (ESSA project)
          Length = 86710

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 500   aggtggcacaacagcagcag 519
             ||||||||||||||||||||
Sbjct: 75986 aggtggcacaacagcagcag 75967



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>emb|BX296538.9| Zebrafish DNA sequence from clone DKEY-275P19 in linkage group 25,
             complete sequence
          Length = 192787

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 495   gccccaggtggcacaacagcagcagtac 522
             ||||| ||||||| ||||||||||||||
Sbjct: 68787 gcccctggtggcagaacagcagcagtac 68814



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>gb|AC097062.2| Homo sapiens chromosome 1 clone RP11-428D12, complete sequence
          Length = 185700

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    aaatgatggcagcttcccag 109
             ||||||||||||||||||||
Sbjct: 61794 aaatgatggcagcttcccag 61775



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>gb|AC097469.2| Homo sapiens BAC clone RP11-55N4 from 4, complete sequence
          Length = 191883

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 166    cctgctatgcaattccaaagttgc 189
              ||||||||||| ||||||||||||
Sbjct: 179894 cctgctatgcagttccaaagttgc 179871



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>gb|AC092390.3| Oryza sativa chromosome 3 BAC OSJNBb0013K08 genomic sequence, complete
             sequence
          Length = 120116

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 481   caacaacaaccacagcccca 500
             ||||||||||||||||||||
Sbjct: 85703 caacaacaaccacagcccca 85722



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>emb|CR389803.1| Gallus gallus finished cDNA, clone ChEST273n21
          Length = 1218

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 507 acaacagcagcagtaccaca 526
           ||||||||||||||||||||
Sbjct: 214 acaacagcagcagtaccaca 195



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>gb|DQ083949.1| Homo sapiens aquaporin 3 (AQP3) gene, complete cds
          Length = 13709

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 451   acagtccaggatgttcactc 470
             ||||||||||||||||||||
Sbjct: 12864 acagtccaggatgttcactc 12845



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>gb|AC092226.1|AC092226 Drosophila melanogaster, chromosome 2L, region 32A-32B, BAC clone
             BACR20O15, complete sequence
          Length = 169210

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   gcaaggcaacaacaaccaca 494
             ||||||||||||||||||||
Sbjct: 88722 gcaaggcaacaacaaccaca 88703



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 481      caacaacaaccacagcccca 500
                ||||||||||||||||||||
Sbjct: 23746677 caacaacaaccacagcccca 23746696



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>gb|AY245105.1| Homo sapiens Wilms tumor 1 (WT1) gene, complete cds
          Length = 50678

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   aacttgtgcctgtctctttg 228
             ||||||||||||||||||||
Sbjct: 48202 aacttgtgcctgtctctttg 48221



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>gb|AC164654.3| Gallus gallus BAC clone CH261-5H7 from chromosome unknown, complete
              sequence
          Length = 250515

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    cagccgcaggcccagaaccc 362
              ||||||||||||||||||||
Sbjct: 169671 cagccgcaggcccagaaccc 169652



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>gb|AC153642.7| Mus musculus 6 BAC RP23-334E23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 227781

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    gcctgtctctttgagtaccc 235
              ||||||||||||||||||||
Sbjct: 217288 gcctgtctctttgagtaccc 217269



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>gb|AE003630.2| Drosophila melanogaster chromosome 2L, section 39 of 83 of the complete
              sequence
          Length = 289460

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 475    gcaaggcaacaacaaccaca 494
              ||||||||||||||||||||
Sbjct: 282320 gcaaggcaacaacaaccaca 282301



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>gb|AC005117.1|AC005117 Drosophila melanogaster, chromosome 2L, region 32D1-32D2, P1 clone
             DS04313, complete sequence
          Length = 69019

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 475   gcaaggcaacaacaaccaca 494
             ||||||||||||||||||||
Sbjct: 24292 gcaaggcaacaacaaccaca 24273



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>emb|CR392035.10| Zebrafish DNA sequence from clone CH211-184N9 in linkage group 1,
             complete sequence
          Length = 110627

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   atcagccacacttgaaccaa 261
             ||||||||||||||||||||
Sbjct: 40341 atcagccacacttgaaccaa 40322



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>gb|M80232.1|HUMWT110 Human Wilms' tumor assocated protein (WT1) gene, exon 10 and
           complete cds
          Length = 362

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 209 aacttgtgcctgtctctttg 228
           ||||||||||||||||||||
Sbjct: 150 aacttgtgcctgtctctttg 169


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,383,363
Number of Sequences: 3902068
Number of extensions: 4383363
Number of successful extensions: 90650
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90516
Number of HSP's gapped (non-prelim): 134
length of query: 548
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 525
effective length of database: 17,143,297,704
effective search space: 9000231294600
effective search space used: 9000231294600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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