Clone Information

BLAST Search Result

Clone Name	baal31a20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	H6ST2_MOUSE (Q80UW0) Heparan-sulfate 6-O-sulfotransferase 2 (EC ...	37	0.034
2	SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (S...	37	0.034
3	CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21	35	0.075
4	PDE4A_DROME (Q9W4T4) cAMP-specific 3',5'-cyclic phosphodiesteras...	35	0.099
5	CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22	35	0.099
6	SFRS6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pr...	35	0.13
7	CCNL2_XENTR (Q5BKF8) Cyclin-L2	34	0.17
8	CWC22_YARLI (Q6C8C5) Pre-mRNA-splicing factor CWC22	34	0.22
9	SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4	34	0.22
10	RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-ri...	33	0.29
11	UAFA_STAS1 (Q4A0V8) Uro-adherence factor A precursor	33	0.49
12	RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-ri...	33	0.49
13	SFRS5_HUMAN (Q13243) Splicing factor, arginine/serine-rich 5 (Pr...	32	0.64
14	YL116_MIMIV (Q5UPJ3) Hypothetical protein L116	32	0.64
15	SFRS4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pr...	32	0.64
16	NKTR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer...	32	0.64
17	SFRS5_RAT (Q09167) Splicing factor, arginine/serine-rich 5 (Pre-...	32	0.83
18	K10_DROME (P13468) DNA-binding protein K10 (Female sterile prote...	32	1.1
19	SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	32	1.1
20	SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (S...	32	1.1
21	NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)	32	1.1
22	SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 ...	31	1.4
23	H6ST2_HUMAN (Q96MM7) Heparan-sulfate 6-O-sulfotransferase 2 (EC ...	31	1.4
24	SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Sp...	31	1.9
25	SFRS5_MOUSE (O35326) Splicing factor, arginine/serine-rich 5 (Pr...	30	2.4
26	VE2_HPV17 (P36785) Regulatory protein E2	30	2.4
27	TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Ta...	30	2.4
28	NCAP_CVCAE (Q04700) Nucleocapsid protein (N structural protein) ...	30	2.4
29	SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Spli...	30	2.4
30	SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Sp...	30	2.4
31	SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Sp...	30	2.4
32	SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Sp...	30	2.4
33	VE2_HPV12 (P36782) Regulatory protein E2	30	3.2
34	CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22	30	3.2
35	A36DE_DROME (Q9V3R1) Accessory gland protein Acp36DE precursor	30	4.1
36	SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inosit...	30	4.1
37	PHC3_MOUSE (Q8CHP6) Polyhomeotic-like protein 3	30	4.1
38	AUTS2_HUMAN (Q8WXX7) Autism susceptibility gene 2 protein	30	4.1
39	CWC21_NEUCR (Q7RYH7) Pre-mRNA-splicing factor cwc-21	29	5.4
40	RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-ri...	29	5.4
41	SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	29	5.4
42	KAPC_DICDI (P34099) cAMP-dependent protein kinase catalytic subu...	29	7.1
43	VE2_HPV25 (P36787) Regulatory protein E2	29	7.1
44	DTBP1_HUMAN (Q96EV8) Dystrobrevin-binding protein 1 (Dysbindin) ...	29	7.1
45	Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)	29	7.1
46	NOL3_HUMAN (O60936) Nucleolar protein 3 (Apoptosis repressor wit...	29	7.1
47	SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Sp...	28	9.2
48	CSP_PLAFA (P02893) Circumsporozoite protein precursor (CS)	28	9.2
49	CSP_PLAFW (P08307) Circumsporozoite protein precursor (CS)	28	9.2
50	CSP_PLAFO (P19597) Circumsporozoite protein precursor (CS)	28	9.2
51	GDBX_WHEAT (P21292) Gamma-gliadin precursor	28	9.2
52	CSP_PLAFT (P13814) Circumsporozoite protein precursor (CS)	28	9.2
53	MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog) (SMA...	28	9.2
54	CSP_PLARE (P26694) Circumsporozoite protein precursor (CS)	28	9.2
55	PRP45_CANAL (Q5AC37) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-pr...	28	9.2
56	VE2_HPV21 (P50767) Regulatory protein E2	28	9.2
57	CSP_PLAFL (P05691) Circumsporozoite protein (CS) (Fragment)	28	9.2

>H6ST2_MOUSE (Q80UW0) Heparan-sulfate 6-O-sulfotransferase 2 (EC 2.8.2.-)|
           (HS6ST-2) (mHS6ST-2) (Fragment)
          Length = 538

 Score = 36.6 bits (83), Expect = 0.034
 Identities = 18/51 (35%), Positives = 33/51 (64%)
 Frame = +2

Query: 257 QSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQNQ 409
           QS+ Q  ++SQSP  +  QN NP+ ++  +++LS +   S +P+ TQ +N+
Sbjct: 457 QSQSQGQSQSQSPGQNLSQNPNPNPNQNLTQNLSHNLTPSSNPNSTQRENR 507

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>SFR16_HUMAN (Q8N2M8) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2)
          Length = 659

 Score = 36.6 bits (83), Expect = 0.034
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = +2

Query: 245 LNPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           L+PS+SR    +RS SP+PS  Q+ + S+SR QS S SP+R +   P+
Sbjct: 485 LSPSRSRSLTRSRSHSPSPS--QSRSRSRSRSQSPSPSPAREKLTRPA 530

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>CWC21_USTMA (Q4P0G6) Pre-mRNA-splicing factor CWC21|
          Length = 348

 Score = 35.4 bits (80), Expect = 0.075
 Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRC---QSQSPS 388
           S+SR ++ +RS+S + S   +   S+SR  SRS SPSRC   +S+SP+
Sbjct: 277 SRSRSRSRSRSRSRSRSPLSHSRSSRSRSPSRSRSPSRCASSRSRSPA 324

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>PDE4A_DROME (Q9W4T4) cAMP-specific 3',5'-cyclic phosphodiesterase, isoform I|
           (EC 3.1.4.17) (Learning/memory process protein) (Protein
           dunce)
          Length = 1209

 Score = 35.0 bits (79), Expect = 0.099
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQS--RCQSRSLSPSRCQSQSPSLTQCQNQ 409
           NP QS  QN  ++ +PNP++  N NP+Q+  RC         CQ Q+  L   + +
Sbjct: 284 NPCQSAVQNQGQNSNPNPNQNPNTNPNQNQQRCS--------CQPQTSPLPHIKEE 331

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>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22|
          Length = 907

 Score = 35.0 bits (79), Expect = 0.099
 Identities = 21/54 (38%), Positives = 33/54 (61%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQNQ 409
           +PS+S  ++ +RS+SP P R ++ + S SR +SRS S S  +S +P   Q   Q
Sbjct: 704 SPSRSVSRSISRSRSPAPIRGRSYSRSVSRSRSRSYSRSVSRSPTPPRRQAPAQ 757



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/47 (36%), Positives = 31/47 (65%)
 Frame = +2

Query: 257 QSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQ 397
           ++  ++P+RS S + SR ++  P + R  SRS+S SR +S S S+++
Sbjct: 699 RNNARSPSRSVSRSISRSRSPAPIRGRSYSRSVSRSRSRSYSRSVSR 745



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPS-RCQSQSPS 388
           S+SR  + + S+SP P R Q   P+Q R + RS +PS R +S+S S
Sbjct: 734 SRSRSYSRSVSRSPTPPRRQA--PAQQRGRQRSYTPSDRSRSRSYS 777

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>SFRS6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pre-mRNA-splicing|
           factor SRP55)
          Length = 344

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSP---NPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           S+SR ++ +RS SP    PS+ ++++P   R  SRS S SR +S+S S
Sbjct: 291 SKSRSRSQSRSNSPLPVPPSKARSVSPPPKRATSRSRSRSRSKSRSRS 338

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>CCNL2_XENTR (Q5BKF8) Cyclin-L2|
          Length = 497

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = +2

Query: 257 QSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSP 385
           QS  ++ +RSQSP   + Q+ +PS     S+S SPSR +S SP
Sbjct: 370 QSYSRSQSRSQSPKRRKSQSYSPSS---DSKSRSPSRSRSDSP 409



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 21/47 (44%), Positives = 25/47 (53%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           +P   R      S+S + SR Q    S SR QSRS SP R +SQS S
Sbjct: 349 SPVNGRVSKGRDSRSGSRSRDQ----SYSRSQSRSQSPKRRKSQSYS 391

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>CWC22_YARLI (Q6C8C5) Pre-mRNA-splicing factor CWC22|
          Length = 954

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           S+SR ++ +R ++ +P R +  + S SR  SRS S SR  S+SPS
Sbjct: 830 SRSRSRSLSRDRTGSPPRGRRRSRSYSRSPSRSYSRSRSYSRSPS 874



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = +2

Query: 248  NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSL 355
            +PS+S C++PN+ ++P P +   L+P + R ++  L
Sbjct: 920  SPSRSPCRSPNKGRAPTPEK--GLSPPRKRVRASDL 953

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>SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4|
          Length = 489

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 18/54 (33%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
 Frame = +2

Query: 248 NPS-QSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
           NP  ++R ++ ++S+   P+  ++ + S S+ +SRS SPSR  S+SPS ++ ++
Sbjct: 432 NPEPRARSRSTSKSKPNVPAESRSRSKSASKTRSRSKSPSRSASRSPSRSRSRS 485



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLS 358
           S+S+  +  RS+S +PSR  + +PS+SR +S S S
Sbjct: 455 SRSKSASKTRSRSKSPSRSASRSPSRSRSRSHSRS 489

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>RSP3_CAEEL (Q9NEW6) Probable splicing factor, arginine/serine-rich 3 (CeSF2)|
           (CeSF2/ASF)
          Length = 258

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 20/45 (44%), Positives = 27/45 (60%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           S+SR     R  SP  S  ++ + S+SR +SRS S SR  S+SPS
Sbjct: 212 SRSRSPRAERRASPKYSPRRSRSRSRSRSRSRSRSASRSPSRSPS 256

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>UAFA_STAS1 (Q4A0V8) Uro-adherence factor A precursor|
          Length = 2316

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 20/54 (37%), Positives = 34/54 (62%)
 Frame = +2

Query: 245  LNPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
            L+ S+S  Q+ + SQS + S  ++L+ S+S  +S SLS S   S S SL++ ++
Sbjct: 1723 LSTSESLRQSESLSQSLSLSASESLSASESISESESLSESESLSASESLSESES 1776



 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/54 (31%), Positives = 34/54 (62%)
 Frame = +2

Query: 245  LNPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
            L+ S+S  ++ + S+S + S  ++L+ S+S  +S SLS     SQS +L++ ++
Sbjct: 1303 LSESESLSESESLSESESLSASESLSESESLSESESLSARESLSQSEALSESES 1356



 Score = 29.6 bits (65), Expect = 4.1
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +2

Query: 245  LNPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
            L+ S+S     + SQS   S  ++L+ S+S  +S SLS S   S+S  L++ ++
Sbjct: 1333 LSESESLSARESLSQSEALSESESLSTSESLSESESLSASESISESEYLSESES 1386



 Score = 29.6 bits (65), Expect = 4.1
 Identities = 19/54 (35%), Positives = 32/54 (59%)
 Frame = +2

Query: 245 LNPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
           L+ S S  ++ + SQS + S  ++L+ S S   S SLS S   S+S SL++ ++
Sbjct: 829 LSHSLSLSESESTSQSLSLSTSESLSQSLSLSASESLSESESLSESESLSESES 882



 Score = 29.3 bits (64), Expect = 5.4
 Identities = 20/51 (39%), Positives = 30/51 (58%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
           S S  ++ + SQS + S   +L+ S+S  QS SLS S   SQS SL+  ++
Sbjct: 814 SLSLSESLSTSQSLSLSHSLSLSESESTSQSLSLSTSESLSQSLSLSASES 864



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
           S S   + + SQS + S  ++L+ S+S  +S SLS S   S S SL++ ++
Sbjct: 844 SLSLSTSESLSQSLSLSASESLSESESLSESESLSESESLSASESLSESES 894

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>RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-rich 1|
           (RNA-binding protein srp-5) (CeSRp75)
          Length = 312

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 19/45 (42%), Positives = 30/45 (66%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           S+S  ++ +RS+SP P R +  + S+SR +SRS S    +S+SPS
Sbjct: 228 SRSSSRSKSRSRSP-PKRSRRESKSKSRSRSRSRSADNRKSRSPS 271

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>SFRS5_HUMAN (Q13243) Splicing factor, arginine/serine-rich 5 (Pre-mRNA-splicing|
           factor SRP40) (Delayed-early protein HRS)
          Length = 272

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 20/45 (44%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQ-NLNPSQSRCQSRSLSPSRCQSQSP 385
           S+SR ++ +RS+S + SR + + + S+SR +SRS S SR  S+SP
Sbjct: 190 SRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSKSRSVSRSP 234

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>YL116_MIMIV (Q5UPJ3) Hypothetical protein L116|
          Length = 563

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRC----QSRSLSPSRCQSQSP 385
           +P +SR ++P RS+  +P R +  +P +SR     +SR  SP R   +SP
Sbjct: 139 SPERSRYRSPERSRYRSPERSRYRSPERSRYRSPERSRYRSPERSHYRSP 188



 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
 Frame = +2

Query: 245 LNPSQSRCQNPNRSQSPNPSRCQNLNPSQSRC----QSRSLSPSRCQSQSP 385
           L+  +SR ++P RS+  +P R +  +P +SR     +SR  SP R + +SP
Sbjct: 130 LSSERSRYRSPERSRYRSPERSRYRSPERSRYRSPERSRYRSPERSRYRSP 180



 Score = 29.3 bits (64), Expect = 5.4
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQS 382
           +P +SR ++P RS+  +P R    +P +S  +S + S  R   +S
Sbjct: 163 SPERSRYRSPERSRYRSPERSHYRSPDRSHYRSHNKSTERSHYRS 207



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
 Frame = +2

Query: 248 NPSQSRCQNPNRS--QSPNPSRCQNLNPSQSRC------QSRSLSPSRCQSQSPSLTQ 397
           +P +SR ++P RS  +SP+ S  ++ N S  R       +SR  SP R   +SP +++
Sbjct: 171 SPERSRYRSPERSHYRSPDRSHYRSHNKSTERSHYRSTERSRYRSPERSHYRSPEISR 228



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQS 382
           +P +SR ++P RS+  +P R +  +P +S  +S   S  R  ++S
Sbjct: 155 SPERSRYRSPERSRYRSPERSRYRSPERSHYRSPDRSHYRSHNKS 199

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>SFRS4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pre-mRNA-splicing|
           factor SRP75) (SRP001LB)
          Length = 494

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 17/51 (33%), Positives = 34/51 (66%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
           ++SR ++ ++S+   PS  ++ + S S+ +SRS S SR  S+SPS ++ ++
Sbjct: 440 TRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSRS 490



 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/45 (42%), Positives = 27/45 (60%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           S+SR    +RS+S +     + + S+SR  SRS S SR +SQS S
Sbjct: 196 SRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRS 240

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>NKTR_HUMAN (P30414) NK-tumor recognition protein (Natural-killer cells|
            cyclophilin-related protein) (NK-TR protein)
          Length = 1462

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 21/50 (42%), Positives = 33/50 (66%), Gaps = 3/50 (6%)
 Frame = +2

Query: 254  SQSRCQNPNR---SQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLT 394
            S S  Q P+R   SQS +PSR ++ + ++SR ++RS+S S  +S+S S T
Sbjct: 1296 SSSDEQTPSRDDDSQSRSPSRSRSKSETKSRHRTRSVSYSHSRSRSRSST 1345

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>SFRS5_RAT (Q09167) Splicing factor, arginine/serine-rich 5 (Pre-mRNA-splicing|
           factor SRP40) (Insulin-induced growth response protein
           CL-4) (Delayed-early protein HRS)
          Length = 269

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 20/44 (45%), Positives = 32/44 (72%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSP 385
           S+SR ++ +RS+S + SR ++ + S+SR +SRS S SR  S+SP
Sbjct: 189 SRSRTRSSSRSRSRSRSR-RSKSYSRSRSRSRSRSKSRSGSRSP 231

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>K10_DROME (P13468) DNA-binding protein K10 (Female sterile protein K10)|
          Length = 463

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRC-QSQSP 385
           +P+Q +  +PN+ Q PN ++ Q+L+P+Q + +  + + +   QSQ P
Sbjct: 148 SPNQQQHPSPNQQQHPNSNQQQHLSPNQQQGKMNNQNNNHMNQSQQP 194



 Score = 31.2 bits (69), Expect = 1.4
 Identities = 15/48 (31%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSR----CQSRSLSPSRCQSQ 379
           +P+Q +  +PN+ Q P+P++ Q+ +P+Q +     Q + LSP++ Q +
Sbjct: 132 SPNQQQPPSPNQQQHPSPNQQQHPSPNQQQHPNSNQQQHLSPNQQQGK 179



 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +2

Query: 257 QSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
           Q +  +PN+ Q P+P++ Q+ +P+Q +       PS  Q Q P+  Q Q+
Sbjct: 127 QQQHPSPNQQQPPSPNQQQHPSPNQQQ------HPSPNQQQHPNSNQQQH 170

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>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1575

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +2

Query: 245  LNPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
            L PS S     + S SP  S CQ+   S+    S  + PSR  S++P     Q+
Sbjct: 1030 LQPSSSSGLGTSPSSSPRTSPCQSPTISEGPVPSLPIRPSRAPSRTPGPPSAQS 1083

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>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of|
           white-apricot homolog 2) (Clk4-associating SR-related
           protein)
          Length = 653

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +2

Query: 251 PSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           P      +   S S +PSR +++  S SR QSRS S S+  SQS S
Sbjct: 465 PRHHSSSHSRSSWSLSPSRSRSVTRSGSRSQSRSRSRSQSHSQSQS 510



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/48 (39%), Positives = 29/48 (60%)
 Frame = +2

Query: 245 LNPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           L+PS+SR  +  RS S + SR ++ + S S+ QS S SP R +   P+
Sbjct: 479 LSPSRSR--SVTRSGSRSQSRSRSRSQSHSQSQSHSPSPPREKLTRPA 524



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 284 SQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           S SP+ SR    + S+S+ +SRS S S  QSQS S
Sbjct: 478 SLSPSRSRSVTRSGSRSQSRSRSRSQSHSQSQSHS 512

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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           +PS S   +P  +  P+P +    +PS S   S+S SPS   S +PS
Sbjct: 170 SPSPSPSPSPRSTPIPHPRKRSPASPSPSPSLSKSPSPSESPSLAPS 216



 Score = 29.6 bits (65), Expect = 4.1
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +2

Query: 251 PSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           PS S   +P+ S SP+P      +P +    S S SPS  +S SPS
Sbjct: 163 PSPSPSPSPSPSPSPSPRSTPIPHPRKRSPASPSPSPSLSKSPSPS 208

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>SRBS1_MOUSE (Q62417) Sorbin and SH3 domain-containing protein 1 (Ponsin)|
            (c-Cbl-associated protein) (CAP) (SH3 domain protein 5)
            (SH3P12)
          Length = 1290

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +2

Query: 290  SPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQNQ 409
            S +PSR   ++P Q + Q R ++P R Q   PSL  C  Q
Sbjct: 1199 SSSPSRSATVSPQQPQAQQRRVTPDRSQ---PSLDLCSYQ 1235

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>H6ST2_HUMAN (Q96MM7) Heparan-sulfate 6-O-sulfotransferase 2 (EC 2.8.2.-)|
           (HS6ST-2)
          Length = 605

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +2

Query: 257 QSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQS-QSPSLTQCQNQ 409
           Q + QNPN++QS NP+   N N +Q+  Q+ + S S+ ++ +SP     + Q
Sbjct: 535 QGQSQNPNQNQSQNPNPNANQNLTQNLMQNLTQSLSQKENRESPKQNSGKEQ 586



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 15/47 (31%), Positives = 30/47 (63%)
 Frame = +2

Query: 269 QNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQNQ 409
           Q   +SQ+PN ++ QN NP+     +++L+ +  Q+ + SL+Q +N+
Sbjct: 533 QGQGQSQNPNQNQSQNPNPN----ANQNLTQNLMQNLTQSLSQKENR 575

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>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 221

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/47 (40%), Positives = 30/47 (63%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLT 394
           S+SR ++ +RS S + S  ++ + S S  +SRS S SR +S+SP  T
Sbjct: 149 SRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPT 195

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>SFRS5_MOUSE (O35326) Splicing factor, arginine/serine-rich 5 (Pre-mRNA-splicing|
           factor SRP40) (Delayed-early protein HRS)
          Length = 270

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/44 (45%), Positives = 31/44 (70%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSP 385
           S+SR ++  RS+S + SR ++ + S+SR +SRS S SR  S+SP
Sbjct: 190 SRSRTRSSLRSRSRSRSR-RSKSYSRSRSRSRSRSKSRSGSRSP 232

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>VE2_HPV17 (P36785) Regulatory protein E2|
          Length = 452

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 18/44 (40%), Positives = 26/44 (59%)
 Frame = +2

Query: 257 QSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           + R  + + S+SPN  R  +     +R QSRSLS SR +S+S S
Sbjct: 287 RERSYSRDSSRSPNRGRGGSSGGPTTRSQSRSLSRSRSRSRSRS 330

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>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)|
           (Trio-associated repeat on actin)
          Length = 2365

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNP--SRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQC 400
           NP  SR  +PNR+   NP  S  Q  NP       R+ SP+R   Q    T C
Sbjct: 607 NPRASRTSSPNRATRDNPRTSCAQRDNP-------RASSPNRTTQQDSPRTSC 652



 Score = 30.4 bits (67), Expect = 2.4
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNP--SRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQC 400
           NP  SR  +PNR+   NP  S  Q  NP       R+ SPSR    +P+ T C
Sbjct: 411 NPKASRTSSPNRATRDNPRTSCAQRDNP-------RASSPSRATRDNPT-TSC 455



 Score = 30.0 bits (66), Expect = 3.2
 Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNP--SRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQC 400
           NP  SR  +PNR+   NP  S  Q  NP       R+ SPSR    +P+ T C
Sbjct: 460 NPRASRTSSPNRATRDNPRTSCAQRDNP-------RASSPSRATRDNPT-TSC 504



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNP--SRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQC 400
           NP  SR  +PNR+   NP  S  Q  NP       R+ SP+R    +P+ T C
Sbjct: 558 NPRASRTSSPNRATRDNPRTSCAQRDNP-------RASSPNRATRDNPT-TSC 602



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNP--SRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQC 400
           NP  SR  +PNR+   NP  S  Q  NP       R+ SP+R    +P+ T C
Sbjct: 509 NPRASRTSSPNRATRDNPRTSCAQRDNP-------RASSPNRAARDNPT-TSC 553

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>NCAP_CVCAE (Q04700) Nucleocapsid protein (N structural protein) (NC)|
          Length = 382

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +2

Query: 296 NPSRCQNLNPSQSRCQSRSLSPSRCQSQS 382
           N SR  + +PSQSR QSR+ S SR + QS
Sbjct: 154 NQSRDNSRSPSQSRSQSRNRSQSRGRQQS 182

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>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSP 385
           S+SR ++ +RS S + S  ++ + S S  +SRS S SR +S+SP
Sbjct: 148 SRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSP 191

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>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa)
          Length = 220

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSP 385
           S+SR ++ +RS S + S  ++ + S S  +SRS S SR +S+SP
Sbjct: 148 SRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSP 191

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>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein) (Putative myelin regulatory factor 1) (MRF-1)
          Length = 220

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSP 385
           S+SR ++ +RS S + S  ++ + S S  +SRS S SR +S+SP
Sbjct: 148 SRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSP 191

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>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor|
           SC35) (SC-35) (Splicing component, 35 kDa) (PR264
           protein)
          Length = 220

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSP 385
           S+SR ++ +RS S + S  ++ + S S  +SRS S SR +S+SP
Sbjct: 148 SRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSP 191

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>VE2_HPV12 (P36782) Regulatory protein E2|
          Length = 494

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQ--SQSPSLTQCQNQ 409
           S++R Q   + +S +  R Q+ + S+S+ Q+R+L  +     S+SPS+TQ +N+
Sbjct: 250 SRTRRQETQQRRSRSRYRSQSNSRSRSQSQTRALGATSVSRSSRSPSVTQIRNR 303

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>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22|
          Length = 881

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLS-PSRCQSQSPSLTQCQN 406
           S+SR ++ + S+SP+ SR +  + S+ R  SRS+S  SR +S +PS ++ ++
Sbjct: 656 SRSRSRSYSYSRSPSRSRGRRRSISRGRSYSRSVSGSSRGRSYTPSYSRSRS 707

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>A36DE_DROME (Q9V3R1) Accessory gland protein Acp36DE precursor|
          Length = 912

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNL--------NPSQSRCQSRSLSPSRCQSQSPSLTQCQNQ 409
           SQ++ Q+ ++S+S   S+ Q          NP  S  QS+S S S+ +SQ  S +Q Q Q
Sbjct: 196 SQTQSQSASQSESNASSQFQAQEQSNRLLENPPVSESQSQSESQSQSESQKQSQSQSQRQ 255

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>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1574

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +2

Query: 245  LNPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSP 385
            L PS S     + S SP  S CQ+    +    S  + PSR  S++P
Sbjct: 1030 LQPSSSSGLGTSPSSSPRTSPCQSPTAPEYSAPSLPIRPSRAPSRTP 1076

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>PHC3_MOUSE (Q8CHP6) Polyhomeotic-like protein 3|
          Length = 981

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +2

Query: 251 PSQSRCQNPNRSQSPNPSRC--QNLNPSQSRCQSRSLSPSRCQSQSPSL 391
           PSQ     PN   SP PS    Q+ +P QS     ++SP++ QS   S+
Sbjct: 345 PSQHCIPLPNHGLSPAPSNAQPQHCSPVQSHPPPLTVSPNQAQSAQQSV 393



 Score = 28.9 bits (63), Expect = 7.1
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = +2

Query: 257 QSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQNQ 409
           QS  Q+P  SQ   P     L+P+ S  Q +  SP   QS  P LT   NQ
Sbjct: 337 QSPSQDPPPSQHCIPLPNHGLSPAPSNAQPQHCSP--VQSHPPPLTVSPNQ 385

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>AUTS2_HUMAN (Q8WXX7) Autism susceptibility gene 2 protein|
          Length = 1259

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = +2

Query: 257 QSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLT 394
           Q + Q P R QSP     QNL P Q+   ++SLS       S SL+
Sbjct: 355 QPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQPLSAYNSSSLS 400

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>CWC21_NEUCR (Q7RYH7) Pre-mRNA-splicing factor cwc-21|
          Length = 344

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSR---CQSQSPSLTQCQNQ 409
           ++S  ++  RS+SP   R  + + S+SR  SRS SP R     SQ  SL++ +++
Sbjct: 268 TRSPVRDTGRSRSPVSERSLSRSRSRSRSYSRSRSPPRRRAADSQDRSLSRSRSR 322

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>RSP4_CAEEL (Q09511) Probable splicing factor, arginine/serine-rich 4|
           (RNA-binding protein srp-2) (CeSC35)
          Length = 196

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
 Frame = +2

Query: 251 PSQSRCQNPNR-------SQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQS 382
           PS+ R  +P+R       S+SP P    +    +SR +S S SPSR +S S
Sbjct: 145 PSRDRRDSPDRRDNSRSRSRSPPPREDGSPKERRSRSRSASRSPSRSRSNS 195

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>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1574

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +2

Query: 245  LNPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSP 385
            L PS S     + S SP  S CQ+    +    S  + PSR  S++P
Sbjct: 1030 LQPSSSSGLGTSPSSSPRTSPCQSPTVPEYSAPSLPIRPSRAPSRTP 1076

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>KAPC_DICDI (P34099) cAMP-dependent protein kinase catalytic subunit (EC|
           2.7.11.11)
          Length = 648

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/53 (30%), Positives = 20/53 (37%)
 Frame = +2

Query: 251 PSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQNQ 409
           P Q + Q P + Q P     QN    Q + Q + L     Q Q     Q Q Q
Sbjct: 158 PQQQQQQQPQQQQQPQQQLQQNNQQQQQQLQQQQLQQQLQQQQQQQQQQQQQQ 210

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>VE2_HPV25 (P36787) Regulatory protein E2|
          Length = 502

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 19/38 (50%), Positives = 25/38 (65%)
 Frame = +2

Query: 269 QNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQS 382
           Q  +RS+S + SR Q    S+SR +SRS S SR +SQS
Sbjct: 264 QRRSRSKSRSRSRSQ----SRSRIRSRSRSRSRSESQS 297

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>DTBP1_HUMAN (Q96EV8) Dystrobrevin-binding protein 1 (Dysbindin)|
           (Hermansky-Pudlak syndrome 7 protein)
          Length = 351

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = +2

Query: 245 LNPSQSRCQNPNRSQSPNPSRCQNLNPSQS 334
           L P  S CQN    Q PNPS  +   PS S
Sbjct: 270 LGPESSTCQNEITLQVPNPSELRAKPPSSS 299

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>Y091_NPVOP (O10341) Hypothetical 29.3 kDa protein (ORF92)|
          Length = 279

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 245 LNPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLT 394
           L+P+ S    P+ + SP PS     +P+ S   + S +PS   + SP+ T
Sbjct: 87  LSPTPSPTPTPSPTPSPTPSPTPTPSPTPSPTPTPSPTPSPTPTPSPTPT 136

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>NOL3_HUMAN (O60936) Nucleolar protein 3 (Apoptosis repressor with CARD)|
           (Muscle-enriched cytoplasmic protein) (Myp) (Nucleolar
           protein of 30 kDa) (Nop30)
          Length = 219

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +2

Query: 254 SQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           SQS    P +  + + S+ Q+ NP   + QSR+ S +R QS SP+
Sbjct: 151 SQSWKLRPLKRLNRSRSQSQSWNPRLKQNQSRNWSQNRTQSPSPT 195

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>SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Splicing factor|
           9G8)
          Length = 238

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/40 (45%), Positives = 25/40 (62%)
 Frame = +2

Query: 269 QNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           Q+P+RS+S + S  +   P  SR +SRS SP R +S S S
Sbjct: 191 QSPSRSRSRSRSISR---PRSSRSKSRSPSPKRSRSPSGS 227

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>CSP_PLAFA (P02893) Circumsporozoite protein precursor (CS)|
          Length = 412

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
           NP+ +   NPN + + NP+   N NP+ +   + + +P+   + +P+    +N
Sbjct: 238 NPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNKN 290

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>CSP_PLAFW (P08307) Circumsporozoite protein precursor (CS)|
          Length = 442

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
           NP+ +   NPN + + NP+   N NP+ +   + + +P+   + +P+    +N
Sbjct: 268 NPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNKN 320

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>CSP_PLAFO (P19597) Circumsporozoite protein precursor (CS)|
          Length = 397

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
           NP+ +   NPN + + NP+   N NP+ +   + + +P+   + +P+    +N
Sbjct: 223 NPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNKN 275

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>GDBX_WHEAT (P21292) Gamma-gliadin precursor|
          Length = 302

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +2

Query: 251 PSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQ 403
           P Q  CQ P R+  P P +  +  P Q+  Q +   P + Q Q P   Q Q
Sbjct: 40  PQQPFCQQPQRT-IPQPHQTFHHQPQQTFPQPQQTYPHQPQQQFPQTQQPQ 89

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>CSP_PLAFT (P13814) Circumsporozoite protein precursor (CS)|
          Length = 424

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
           NP+ +   NPN + + NP+   N NP+ +   + + +P+   + +P+    +N
Sbjct: 250 NPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNKN 302

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>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)|
           (SMART/HDAC1-associated repressor protein)
          Length = 3644

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +2

Query: 254 SQSRCQNPNR--SQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPS 388
           SQSR Q+P R  SQ+  P+R    +PS S  +SRS S     S S S
Sbjct: 248 SQSRNQSPQRLASQASRPTR----SPSGSGSRSRSSSSDSISSSSSS 290

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>CSP_PLARE (P26694) Circumsporozoite protein precursor (CS)|
          Length = 388

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
           NP+ +   NPN + + NP+   N NP+ +   + + +P+   + +P+    +N
Sbjct: 214 NPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNRN 266

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>PRP45_CANAL (Q5AC37) Pre-mRNA-splicing factor PRP45 (Pre-mRNA-processing|
           protein 45)
          Length = 286

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +2

Query: 245 LNPSQSRCQNPN--RSQSPNPSRCQNLNPSQSRCQSRSLSPSR 367
           LNPS     + N  + ++PNP+   N NP+Q + Q  S S S+
Sbjct: 104 LNPSDEPTNDINYIKYENPNPNPNPNPNPNQEQQQQSSSSSSK 146

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>VE2_HPV21 (P50767) Regulatory protein E2|
          Length = 503

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 17/39 (43%), Positives = 25/39 (64%)
 Frame = +2

Query: 281 RSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQ 397
           RS+S + SR ++ +  +SR +SRS S SR +SQS    Q
Sbjct: 266 RSRSKSRSRSRSRSRLRSRSRSRSRSYSRSRSQSSDQPQ 304

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>CSP_PLAFL (P05691) Circumsporozoite protein (CS) (Fragment)|
          Length = 315

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +2

Query: 248 NPSQSRCQNPNRSQSPNPSRCQNLNPSQSRCQSRSLSPSRCQSQSPSLTQCQN 406
           NP+ +   NPN + + NP+   N NP+ +   + + +P+   + +P+    +N
Sbjct: 218 NPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNANPNKN 270


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,452,090
Number of Sequences: 219361
Number of extensions: 140571
Number of successful extensions: 1892
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1730
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result