| Clone Name | baal30l06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL138753.8| Human DNA sequence from clone RP11-3L8 on chromosome 9 Contains the TYRP1 gene for tyrosinase-related protein 1, the 3' end of a novel gene and the 5' end of a novel gene (FLJ38505 FLJ90271), complete sequence Length = 162151 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 gaaaccctggtttatctggct 96 ||||||||||||||||||||| Sbjct: 156242 gaaaccctggtttatctggct 156222
>ref|XM_970443.1| PREDICTED: Tribolium castaneum similar to CG12047-PA, isoform A (LOC664436), mRNA Length = 6792 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 agcttcgtttcagtctcaacc 336 ||||||||||||||||||||| Sbjct: 1259 agcttcgtttcagtctcaacc 1239
>dbj|AB013448.1| Oryza sativa (japonica cultivar-group) gene for Pib, complete cds Length = 10322 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 96 tgcttggatgccctatcatcacctccgaaaaaactacagagcctgaagctgta 148 |||||||||| |||| || |||||| |||| ||||||||||| |||||||| Sbjct: 8383 tgcttggatgatatatcctcgcctccggaaaacctacagagcctcaagctgta 8435
>dbj|AB013449.2| Oryza sativa (japonica cultivar-group) mRNA for Pib, complete cds Length = 4288 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 96 tgcttggatgccctatcatcacctccgaaaaaactacagagcctgaagctgta 148 |||||||||| |||| || |||||| |||| ||||||||||| |||||||| Sbjct: 3469 tgcttggatgatatatcctcgcctccggaaaacctacagagcctcaagctgta 3521
>dbj|AB013450.1| Oryza sativa (japonica cultivar-group) DNA, similar sequence to Pib gene Length = 9827 Score = 42.1 bits (21), Expect = 1.3 Identities = 48/57 (84%) Strand = Plus / Plus Query: 92 tggctgcttggatgccctatcatcacctccgaaaaaactacagagcctgaagctgta 148 |||||||||||||| |||| || |||||| |||| || |||||||| |||||||| Sbjct: 8878 tggctgcttggatgatatatcctcgcctccggaaaacctgcagagcctcaagctgta 8934
>dbj|AB026839.1| Oryza sativa gene for Pi-b protein, complete cds Length = 7295 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 96 tgcttggatgccctatcatcacctccgaaaaaactacagagcctgaagctgta 148 |||||||||| |||| || |||||| |||| ||||||||||| |||||||| Sbjct: 5986 tgcttggatgatatatcctcgcctccggaaaacctacagagcctcaagctgta 6038
>emb|AL356772.14| Human DNA sequence from clone RP11-47B24 on chromosome 10, complete sequence Length = 163861 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tcacctccgaaaaaactaca 133 |||||||||||||||||||| Sbjct: 26641 tcacctccgaaaaaactaca 26660
>gb|AC104507.5| Drosophila melanogaster 3L BAC RP98-26J11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 183911 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ttgaggcactcgttcgctggcgaa 314 |||| ||||||||||||||||||| Sbjct: 121648 ttgacgcactcgttcgctggcgaa 121625
>gb|AC010003.8| Drosophila melanogaster 3L BAC RP98-6L11 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 183291 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ttgaggcactcgttcgctggcgaa 314 |||| ||||||||||||||||||| Sbjct: 2055 ttgacgcactcgttcgctggcgaa 2032
>ref|NM_168762.2| Drosophila melanogaster CG32195-RA (CG32195), mRNA Length = 1475 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ttgaggcactcgttcgctggcgaa 314 |||| ||||||||||||||||||| Sbjct: 1418 ttgacgcactcgttcgctggcgaa 1395
>gb|AC105068.19| Mus musculus chromosome 5, clone RP23-445H19, complete sequence Length = 199878 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 gaaaaaactacagagcctgaagct 145 |||||||| ||||||||||||||| Sbjct: 195588 gaaaaaaccacagagcctgaagct 195611
>gb|AE003521.3| Drosophila melanogaster chromosome 3L, section 64 of 83 of the complete sequence Length = 271237 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 ttgaggcactcgttcgctggcgaa 314 |||| ||||||||||||||||||| Sbjct: 36085 ttgacgcactcgttcgctggcgaa 36062
>gb|AC118926.13| Mus musculus chromosome 5, clone RP23-323D23, complete sequence Length = 232698 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 gaaaaaactacagagcctgaagct 145 |||||||| ||||||||||||||| Sbjct: 182531 gaaaaaaccacagagcctgaagct 182508 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,446,633 Number of Sequences: 3902068 Number of extensions: 2446633 Number of successful extensions: 52069 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52053 Number of HSP's gapped (non-prelim): 16 length of query: 373 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 351 effective length of database: 17,147,199,772 effective search space: 6018667119972 effective search space used: 6018667119972 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)