ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal30k08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome... 115 9e-23
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 115 9e-23
3dbj|AK099586.1| Oryza sativa (japonica cultivar-group) cDNA clon... 115 9e-23
4ref|NM_197572.1| Oryza sativa (japonica cultivar-group) hypothet... 62 1e-06
5gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 geno... 62 1e-06
6dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
7dbj|AK120628.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
8gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 62 1e-06
9gb|AC147380.2| Mus musculus BAC clone RP24-119J10 from chromosom... 46 0.067
10gb|AC134243.3| Mus musculus BAC clone RP24-90E15 from chromosome... 46 0.067
11gb|AC008952.7| Homo sapiens chromosome 5 clone CTD-2337D22, comp... 46 0.067
12gb|AC008838.6| Homo sapiens chromosome 5 clone CTD-2151B15, comp... 46 0.067
13gb|AE014851.1| Plasmodium falciparum 3D7 chromosome 12, section ... 44 0.26
14gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 44 0.26
15gb|AC164080.7| Mus musculus chromosome 1, clone RP23-212E14, com... 44 0.26
16emb|CR628337.1| Legionella pneumophila str. Lens complete genome 44 0.26
17emb|CR407556.7| Zebrafish DNA sequence from clone DKEY-255P24 in... 44 0.26
18gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, compl... 44 0.26
19gb|AC079232.7| Homo sapiens BAC clone RP11-360H22 from 4, comple... 44 0.26
20gb|AC102601.8| Mus musculus chromosome 1, clone RP23-379D23, com... 44 0.26
21gb|AC163683.4| Mus musculus BAC clone RP23-8L20 from chromosome ... 42 1.0
22gb|AC163747.4| Mus musculus BAC clone RP23-403P6 from chromosome... 42 1.0
23gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 1.0
24emb|AL139038.18| Human DNA sequence from clone RP11-456B18 on ch... 42 1.0
25emb|CR847858.15| Zebrafish DNA sequence from clone DKEY-78H3 in ... 42 1.0
26emb|BX465863.11| Zebrafish DNA sequence from clone RP71-5C20 in ... 42 1.0
27gb|AC095347.6| Homo sapiens 12 BAC RP11-413D8 (Roswell Park Canc... 42 1.0
28gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.0
29gb|AC008273.2| Homo sapiens BAC clone RP11-150O2 from 2, complet... 42 1.0
30dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.0
31dbj|AP002449.4| Homo sapiens genomic DNA, chromosome 18 clone:RP... 42 1.0
32gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 4.1
33gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
34gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.1
35gb|AC186553.1| Pan troglodytes chromosome 6 clone CH251-664D19, ... 40 4.1
36gb|AC142146.3| Mus musculus BAC clone RP24-74D8 from chromosome ... 40 4.1
37gb|AC122326.4| Mus musculus BAC clone RP23-337J18 from chromosom... 40 4.1
38gb|AC183547.2| Pan troglodytes BAC clone CH251-213F19 from chrom... 40 4.1
39ref|XM_719132.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 4.1
40ref|XM_737404.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 4.1
41gb|AC121244.13| Medicago truncatula clone mth2-31b9, complete se... 40 4.1
42emb|AL512602.8| Human DNA sequence from clone RP11-111M7 on chro... 40 4.1
43emb|AL137007.9| Human DNA sequence from clone RP1-303F19 on chro... 40 4.1
44emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast g... 40 4.1
45emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete... 40 4.1
46emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome 40 4.1
47emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, comple... 40 4.1
48gb|AC182732.2| Pan troglodytes BAC clone CH251-716H13 from chrom... 40 4.1
49gb|AC183106.3| Pan troglodytes BAC clone CH251-522A15 from chrom... 40 4.1
50gb|AC182636.3| Pan troglodytes BAC clone CH251-519F5 from chromo... 40 4.1
51gb|AC182399.3| Pan troglodytes BAC clone CH251-19C24 from chromo... 40 4.1
52dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
53gb|AF311736.1|AF311736 Anemone tenuicaulis atpB-rbcL intergenic ... 40 4.1
54gb|AF311735.1|AF311735 Anemone antucensis atpB-rbcL intergenic s... 40 4.1
55gb|AC110994.8| Homo sapiens 3 BAC RP11-144C15 (Roswell Park Canc... 40 4.1
56emb|BX649481.10| Zebrafish DNA sequence from clone CH211-103D13 ... 40 4.1
57dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
58dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.1
59dbj|AB016880.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 4.1
60emb|AJ338234.1|HSA338234 Homo sapiens genomic sequence surroundi... 40 4.1
61emb|AJ341934.1|HSA341934 Homo sapiens genomic sequence surroundi... 40 4.1
62dbj|AK071196.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.1
63emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1... 40 4.1
64emb|CR388185.10| Zebrafish DNA sequence from clone CH211-256G21 ... 40 4.1
65emb|BX004795.6| Zebrafish DNA sequence from clone DKEY-29D12 in ... 40 4.1
66gb|AY055410.1| Anemone tenuicaulis chlorplast atpB-rbcL intergen... 40 4.1
67dbj|AB096139.1| Oryza sativa (japonica cultivar-group) Chia1d mR... 40 4.1
68gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome... 40 4.1
69emb|BX005103.4| Zebrafish DNA sequence from clone CH211-149O7 in... 40 4.1
70gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster... 40 4.1
71emb|CT025655.16| Mouse DNA sequence from clone RP23-429H3 on chr... 40 4.1
72gb|AC118475.44| Mus musculus chromosome 13, clone RP23-359G8, co... 40 4.1
73emb|AJ342161.1|HSA342161 Homo sapiens genomic sequence surroundi... 40 4.1
74dbj|AB012855.1| Oryza sativa mRNA for chitinase, complete cds 40 4.1
75dbj|AB018248.1| Oryza sativa (indica cultivar-group) mRNA for ch... 40 4.1 
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05,
              complete sequence
          Length = 141200

 Score =  115 bits (58), Expect = 9e-23
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                          
Query: 34     tgctctggagcatgtcgtcgagggtggtcgccgacatgtggctcaagccgatgcgcaacc 93
              |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||
Sbjct: 103834 tgctctggagcatgtcgtcgagggtgatggccgacatgtggctcaagccgttgcgcaacc 103893

                            
Query: 94     cggacgtgaagatc 107
              | ||||||||||||
Sbjct: 103894 ctgacgtgaagatc 103907
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  115 bits (58), Expect = 9e-23
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                            
Query: 34       tgctctggagcatgtcgtcgagggtggtcgccgacatgtggctcaagccgatgcgcaacc 93
                |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||
Sbjct: 21647208 tgctctggagcatgtcgtcgagggtgatggccgacatgtggctcaagccgttgcgcaacc 21647267

                              
Query: 94       cggacgtgaagatc 107
                | ||||||||||||
Sbjct: 21647268 ctgacgtgaagatc 21647281



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 274     ttttgaaataaataatataa 293
               ||||||||||||||||||||
Sbjct: 4522432 ttttgaaataaataatataa 4522413
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>dbj|AK099586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042N12, full
            insert sequence
          Length = 3025

 Score =  115 bits (58), Expect = 9e-23
 Identities = 70/74 (94%)
 Strand = Plus / Plus

                                                                        
Query: 34   tgctctggagcatgtcgtcgagggtggtcgccgacatgtggctcaagccgatgcgcaacc 93
            |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||
Sbjct: 2661 tgctctggagcatgtcgtcgagggtgatggccgacatgtggctcaagccgttgcgcaacc 2720

                          
Query: 94   cggacgtgaagatc 107
            | ||||||||||||
Sbjct: 2721 ctgacgtgaagatc 2734
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>ref|NM_197572.1| Oryza sativa (japonica cultivar-group) hypothetical protein
            (OSJNBb0064P21.6), mRNA
          Length = 2499

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                       
Query: 39   tggagcatgtcgtcgagggtggtcgccgacatgtggctcaagccgatgcgcaacccgga 97
            |||||| |||||||| ||||| ||||||  |||||||||||| || |||||||||||||
Sbjct: 2392 tggagcttgtcgtcgcgggtgctcgccgggatgtggctcaagacggtgcgcaacccgga 2450
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>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete
             sequence
          Length = 142114

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                        
Query: 39    tggagcatgtcgtcgagggtggtcgccgacatgtggctcaagccgatgcgcaacccgga 97
             |||||| |||||||| ||||| ||||||  |||||||||||| || |||||||||||||
Sbjct: 24784 tggagcttgtcgtcgcgggtgctcgccgggatgtggctcaagacggtgcgcaacccgga 24842
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 39       tggagcatgtcgtcgagggtggtcgccgacatgtggctcaagccgatgcgcaacccgga 97
                |||||| |||||||| ||||| ||||||  |||||||||||| || |||||||||||||
Sbjct: 20519494 tggagcttgtcgtcgcgggtgctcgccgggatgtggctcaagacggtgcgcaacccgga 20519552
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>dbj|AK120628.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153C17, full
            insert sequence
          Length = 2784

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                       
Query: 39   tggagcatgtcgtcgagggtggtcgccgacatgtggctcaagccgatgcgcaacccgga 97
            |||||| |||||||| ||||| ||||||  |||||||||||| || |||||||||||||
Sbjct: 2429 tggagcttgtcgtcgcgggtgctcgccgggatgtggctcaagacggtgcgcaacccgga 2487
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                           
Query: 39       tggagcatgtcgtcgagggtggtcgccgacatgtggctcaagccgatgcgcaacccgga 97
                |||||| |||||||| ||||| ||||||  |||||||||||| || |||||||||||||
Sbjct: 20530766 tggagcttgtcgtcgcgggtgctcgccgggatgtggctcaagacggtgcgcaacccgga 20530824
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>gb|AC147380.2| Mus musculus BAC clone RP24-119J10 from chromosome 17, complete sequence
          Length = 156475

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 262    gctgtaagtaatttttgaaataa 284
              |||||||||||||||||||||||
Sbjct: 135049 gctgtaagtaatttttgaaataa 135027
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>gb|AC134243.3| Mus musculus BAC clone RP24-90E15 from chromosome 17, complete
            sequence
          Length = 193151

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 262  gctgtaagtaatttttgaaataa 284
            |||||||||||||||||||||||
Sbjct: 2389 gctgtaagtaatttttgaaataa 2367
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>gb|AC008952.7| Homo sapiens chromosome 5 clone CTD-2337D22, complete sequence
          Length = 184194

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 262    gctgtaagtaatttttgaaataa 284
              |||||||||||||||||||||||
Sbjct: 106418 gctgtaagtaatttttgaaataa 106440
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>gb|AC008838.6| Homo sapiens chromosome 5 clone CTD-2151B15, complete sequence
          Length = 128642

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 262   gctgtaagtaatttttgaaataa 284
             |||||||||||||||||||||||
Sbjct: 80108 gctgtaagtaatttttgaaataa 80086
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>gb|AE014851.1| Plasmodium falciparum 3D7 chromosome 12, section 8 of 9 of the complete
             sequence
          Length = 251762

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 269   gtaatttttgaaataaataatataagtatt 298
             ||||||||| |||||||||||| |||||||
Sbjct: 24061 gtaatttttaaaataaataataaaagtatt 24090
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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
              genome
          Length = 3397754

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 272    atttttgaaataaataatataagtat 297
              |||||| |||||||||||||||||||
Sbjct: 208875 atttttaaaataaataatataagtat 208850
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>gb|AC164080.7| Mus musculus chromosome 1, clone RP23-212E14, complete sequence
          Length = 205823

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 270    taatttttgaaataaataatat 291
              ||||||||||||||||||||||
Sbjct: 104955 taatttttgaaataaataatat 104976
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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 272    atttttgaaataaataatataagtat 297
              |||||| |||||||||||||||||||
Sbjct: 267663 atttttaaaataaataatataagtat 267638
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>emb|CR407556.7| Zebrafish DNA sequence from clone DKEY-255P24 in linkage group 16,
             complete sequence
          Length = 30724

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 203   atttgtaacaggaaaaatgtaa 224
             ||||||||||||||||||||||
Sbjct: 18139 atttgtaacaggaaaaatgtaa 18118
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>gb|AC104455.2| Homo sapiens chromosome 1 clone RP4-682E18, complete sequence
          Length = 125123

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 280   aataaataatataagtattttt 301
             ||||||||||||||||||||||
Sbjct: 70721 aataaataatataagtattttt 70700
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>gb|AC079232.7| Homo sapiens BAC clone RP11-360H22 from 4, complete sequence
          Length = 169281

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 267    aagtaatttttgaaataaataa 288
              ||||||||||||||||||||||
Sbjct: 112277 aagtaatttttgaaataaataa 112298
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>gb|AC102601.8| Mus musculus chromosome 1, clone RP23-379D23, complete sequence
          Length = 181908

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 270   taatttttgaaataaataatat 291
             ||||||||||||||||||||||
Sbjct: 19756 taatttttgaaataaataatat 19777
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>gb|AC163683.4| Mus musculus BAC clone RP23-8L20 from chromosome 6, complete sequence
          Length = 218138

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 40     ggagcatgtcgtcgagggtgg 60
              |||||||||||||||||||||
Sbjct: 102680 ggagcatgtcgtcgagggtgg 102700
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>gb|AC163747.4| Mus musculus BAC clone RP23-403P6 from chromosome 6, complete
            sequence
          Length = 185160

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 40   ggagcatgtcgtcgagggtgg 60
            |||||||||||||||||||||
Sbjct: 9651 ggagcatgtcgtcgagggtgg 9671
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 40    ggagcatgtcgtcgagggtgg 60
             |||||||||||||||||||||
Sbjct: 81413 ggagcatgtcgtcgagggtgg 81433
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>emb|AL139038.18| Human DNA sequence from clone RP11-456B18 on chromosome 13, complete
              sequence
          Length = 140756

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 272    atttttgaaataaataatata 292
              |||||||||||||||||||||
Sbjct: 134087 atttttgaaataaataatata 134067
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>emb|CR847858.15| Zebrafish DNA sequence from clone DKEY-78H3 in linkage group 5, complete
              sequence
          Length = 255113

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 255    tgagaatgctgtaagtaattt 275
              |||||||||||||||||||||
Sbjct: 144058 tgagaatgctgtaagtaattt 144078
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>emb|BX465863.11| Zebrafish DNA sequence from clone RP71-5C20 in linkage group 5,
            complete sequence
          Length = 117261

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 255  tgagaatgctgtaagtaattt 275
            |||||||||||||||||||||
Sbjct: 8169 tgagaatgctgtaagtaattt 8149
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>gb|AC095347.6| Homo sapiens 12 BAC RP11-413D8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 91600

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 272   atttttgaaataaataatata 292
             |||||||||||||||||||||
Sbjct: 31047 atttttgaaataaataatata 31067
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 13      cggcgaaggccgggaacgaca 33
               |||||||||||||||||||||
Sbjct: 2662055 cggcgaaggccgggaacgaca 2662075
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>gb|AC008273.2| Homo sapiens BAC clone RP11-150O2 from 2, complete sequence
          Length = 151297

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 278    gaaataaataatataagtatttttg 302
              |||||||||| ||||||||||||||
Sbjct: 145815 gaaataaatattataagtatttttg 145839
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>dbj|AP001357.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-807E13, complete
             sequence
          Length = 182382

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 270   taatttttgaaataaataatataag 294
             ||||||||||||| |||||||||||
Sbjct: 29907 taatttttgaaattaataatataag 29931
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>dbj|AP002449.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-773H22, complete
              sequence
          Length = 184000

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 270    taatttttgaaataaataatataag 294
              ||||||||||||| |||||||||||
Sbjct: 162658 taatttttgaaattaataatataag 162682
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 89      caacccggacgtgaagatcg 108
               ||||||||||||||||||||
Sbjct: 1253276 caacccggacgtgaagatcg 1253257
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>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01,
              complete sequence
          Length = 146303

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     ggcggcgaaggccgggaacg 30
              ||||||||||||||||||||
Sbjct: 106227 ggcggcgaaggccgggaacg 106208
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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0035J16, complete sequence
          Length = 170233

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   ggcggcgaaggccgggaacg 30
            ||||||||||||||||||||
Sbjct: 5501 ggcggcgaaggccgggaacg 5482
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>gb|AC186553.1| Pan troglodytes chromosome 6 clone CH251-664D19, complete sequence
          Length = 214787

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 276    ttgaaataaataatataagtattt 299
              ||||||||||||||||| ||||||
Sbjct: 157089 ttgaaataaataatatatgtattt 157066
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>gb|AC142146.3| Mus musculus BAC clone RP24-74D8 from chromosome 9, complete sequence
          Length = 170429

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   taaataatataagtattttt 301
             ||||||||||||||||||||
Sbjct: 42861 taaataatataagtattttt 42842
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>gb|AC122326.4| Mus musculus BAC clone RP23-337J18 from chromosome 10, complete sequence
          Length = 236165

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 270    taatttttgaaataaataatataa 293
              |||||||| |||||||||||||||
Sbjct: 199437 taatttttaaaataaataatataa 199414
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>gb|AC183547.2| Pan troglodytes BAC clone CH251-213F19 from chromosome 6, complete
              sequence
          Length = 190731

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 276    ttgaaataaataatataagtattt 299
              ||||||||||||||||| ||||||
Sbjct: 138960 ttgaaataaataatatatgtattt 138983
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>ref|XM_719132.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00052)
            partial mRNA
          Length = 5094

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 274  ttttgaaataaataatataa 293
            ||||||||||||||||||||
Sbjct: 1803 ttttgaaataaataatataa 1822
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>ref|XM_737404.1| Plasmodium chabaudi chabaudi hypothetical protein (PC109329.00.0)
            partial mRNA
          Length = 1993

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 274  ttttgaaataaataatataa 293
            ||||||||||||||||||||
Sbjct: 1692 ttttgaaataaataatataa 1711
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>gb|AC121244.13| Medicago truncatula clone mth2-31b9, complete sequence
          Length = 146189

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   taaataatataagtattttt 301
             ||||||||||||||||||||
Sbjct: 86613 taaataatataagtattttt 86594
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>emb|AL512602.8| Human DNA sequence from clone RP11-111M7 on chromosome 9, complete
             sequence
          Length = 35187

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 279   aaataaataatataagtatt 298
             ||||||||||||||||||||
Sbjct: 15924 aaataaataatataagtatt 15943
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>emb|AL137007.9| Human DNA sequence from clone RP1-303F19 on chromosome 6q12 Contains
             part of the gene for a novel EGF-like domain containing
             protein, complete sequence
          Length = 105779

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 276   ttgaaataaataatataagtattt 299
             ||||||||||||||||| ||||||
Sbjct: 52739 ttgaaataaataatatatgtattt 52762
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>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome
          Length = 119704

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   taaataatataagtattttt 301
             ||||||||||||||||||||
Sbjct: 45197 taaataatataagtattttt 45178
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>emb|CR925678.1| Ehrlichia ruminantium str. Welgevonden, complete genome
          Length = 1512977

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 281     ataaataatataagtatttt 300
               ||||||||||||||||||||
Sbjct: 1238940 ataaataatataagtatttt 1238959
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>emb|CR925677.1| Ehrlichia ruminantium str. Gardel, complete genome
          Length = 1499920

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 281     ataaataatataagtatttt 300
               ||||||||||||||||||||
Sbjct: 1229646 ataaataatataagtatttt 1229627
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>emb|CR767821.1| Ehrlichia ruminantium strain Welgevonden, complete genome
          Length = 1516355

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 281     ataaataatataagtatttt 300
               ||||||||||||||||||||
Sbjct: 1260846 ataaataatataagtatttt 1260865
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>gb|AC182732.2| Pan troglodytes BAC clone CH251-716H13 from chromosome 6, complete
              sequence
          Length = 172310

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 276    ttgaaataaataatataagtattt 299
              ||||||||||||||||| ||||||
Sbjct: 139701 ttgaaataaataatatatgtattt 139678
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>gb|AC183106.3| Pan troglodytes BAC clone CH251-522A15 from chromosome 6, complete
             sequence
          Length = 173865

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 276   ttgaaataaataatataagtattt 299
             ||||||||||||||||| ||||||
Sbjct: 99256 ttgaaataaataatatatgtattt 99279
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>gb|AC182636.3| Pan troglodytes BAC clone CH251-519F5 from chromosome 6, complete
              sequence
          Length = 197430

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 276    ttgaaataaataatataagtattt 299
              ||||||||||||||||| ||||||
Sbjct: 171555 ttgaaataaataatatatgtattt 171578
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>gb|AC182399.3| Pan troglodytes BAC clone CH251-19C24 from chromosome 6, complete
             sequence
          Length = 226479

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 276   ttgaaataaataatataagtattt 299
             ||||||||||||||||| ||||||
Sbjct: 25941 ttgaaataaataatatatgtattt 25964
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 11       ggcggcgaaggccgggaacg 30
                ||||||||||||||||||||
Sbjct: 19302152 ggcggcgaaggccgggaacg 19302133
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>gb|AF311736.1|AF311736 Anemone tenuicaulis atpB-rbcL intergenic spacer region, partial
           sequence; and ribulose-bisphosphate carboxylase large
           subunit (rbcL) gene, partial cds; chloroplast genes for
           chloroplast products
          Length = 1019

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 269 gtaatttttgaaataaataatata 292
           ||||||| ||||||||||||||||
Sbjct: 584 gtaatttgtgaaataaataatata 561
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>gb|AF311735.1|AF311735 Anemone antucensis atpB-rbcL intergenic spacer region, partial
           sequence; and ribulose-bisphosphate carboxylase large
           subunit (rbcL) gene, partial cds; chloroplast genes for
           chloroplast products
          Length = 1128

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 269 gtaatttttgaaataaataatata 292
           ||||||| ||||||||||||||||
Sbjct: 579 gtaatttgtgaaataaataatata 556
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>gb|AC110994.8| Homo sapiens 3 BAC RP11-144C15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 65203

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 282   taaataatataagtattttt 301
             ||||||||||||||||||||
Sbjct: 61128 taaataatataagtattttt 61147
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>emb|BX649481.10| Zebrafish DNA sequence from clone CH211-103D13 in linkage group 4,
             complete sequence
          Length = 192230

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 264   tgtaagtaatttttgaaataaata 287
             |||||||||||||| |||||||||
Sbjct: 45249 tgtaagtaatttttcaaataaata 45226
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>dbj|AP005592.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0638A12
          Length = 140731

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   ttttgaaataaataatataa 293
             ||||||||||||||||||||
Sbjct: 65806 ttttgaaataaataatataa 65787
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>dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1077E10
          Length = 100821

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   ttttgaaataaataatataa 293
             ||||||||||||||||||||
Sbjct: 94920 ttttgaaataaataatataa 94901
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>dbj|AB016880.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTG10
          Length = 81284

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 270   taatttttgaaataaataatataa 293
             |||||||||||| |||||||||||
Sbjct: 45872 taatttttgaaagaaataatataa 45849
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>emb|AJ338234.1|HSA338234 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ41-859R
          Length = 835

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  caacccggacgtgaagatcg 108
           ||||||||||||||||||||
Sbjct: 225 caacccggacgtgaagatcg 244
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>emb|AJ341934.1|HSA341934 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-DJ1RS
          Length = 771

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  caacccggacgtgaagatcg 108
           ||||||||||||||||||||
Sbjct: 225 caacccggacgtgaagatcg 244
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>dbj|AK071196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086B11, full
           insert sequence
          Length = 1305

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  ggcggcgaaggccgggaacg 30
           ||||||||||||||||||||
Sbjct: 498 ggcggcgaaggccgggaacg 479
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>emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1, COMPLETE SEQUENCE
          Length = 120939

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   atttttgaaataaataatat 291
             ||||||||||||||||||||
Sbjct: 80384 atttttgaaataaataatat 80365
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>emb|CR388185.10| Zebrafish DNA sequence from clone CH211-256G21 in linkage group 18,
              complete sequence
          Length = 178361

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 279    aaataaataatataagtatt 298
              ||||||||||||||||||||
Sbjct: 151630 aaataaataatataagtatt 151611
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>emb|BX004795.6| Zebrafish DNA sequence from clone DKEY-29D12 in linkage group 22,
             complete sequence
          Length = 217240

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 280   aataaataatataagtatttttgt 303
             |||||||||||||| |||||||||
Sbjct: 52346 aataaataatataaatatttttgt 52323
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>gb|AY055410.1| Anemone tenuicaulis chlorplast atpB-rbcL intergenic region,
           complete sequence
          Length = 794

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 269 gtaatttttgaaataaataatata 292
           ||||||| ||||||||||||||||
Sbjct: 241 gtaatttgtgaaataaataatata 264
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>dbj|AB096139.1| Oryza sativa (japonica cultivar-group) Chia1d mRNA for chitinase,
           complete cds
          Length = 1285

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  ggcggcgaaggccgggaacg 30
           ||||||||||||||||||||
Sbjct: 485 ggcggcgaaggccgggaacg 466
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>gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome 10, complete sequence
          Length = 247228

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 270    taatttttgaaataaataatataa 293
              |||||||| |||||||||||||||
Sbjct: 177694 taatttttaaaataaataatataa 177717
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>emb|BX005103.4| Zebrafish DNA sequence from clone CH211-149O7 in linkage group 25,
              complete sequence
          Length = 150295

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    taaataatataagtattttt 301
              ||||||||||||||||||||
Sbjct: 140265 taaataatataagtattttt 140284
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>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome
          Length = 1267782

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    tttttgaaataaataatata 292
              ||||||||||||||||||||
Sbjct: 552088 tttttgaaataaataatata 552107
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>emb|CT025655.16| Mouse DNA sequence from clone RP23-429H3 on chromosome 9, complete
             sequence
          Length = 122239

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 282   taaataatataagtattttt 301
             ||||||||||||||||||||
Sbjct: 54518 taaataatataagtattttt 54499
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>gb|AC118475.44| Mus musculus chromosome 13, clone RP23-359G8, complete sequence
          Length = 190284

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    ggcggcgaaggccgggaacg 30
             ||||||||||||||||||||
Sbjct: 68336 ggcggcgaaggccgggaacg 68355
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>emb|AJ342161.1|HSA342161 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-CP20RS
          Length = 723

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  caacccggacgtgaagatcg 108
           ||||||||||||||||||||
Sbjct: 225 caacccggacgtgaagatcg 244
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>dbj|AB012855.1| Oryza sativa mRNA for chitinase, complete cds
          Length = 1300

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  ggcggcgaaggccgggaacg 30
           ||||||||||||||||||||
Sbjct: 500 ggcggcgaaggccgggaacg 481
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>dbj|AB018248.1| Oryza sativa (indica cultivar-group) mRNA for chitinase, complete
           cds
          Length = 1280

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  ggcggcgaaggccgggaacg 30
           ||||||||||||||||||||
Sbjct: 474 ggcggcgaaggccgggaacg 455


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,135,609
Number of Sequences: 3902068
Number of extensions: 3135609
Number of successful extensions: 95005
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94559
Number of HSP's gapped (non-prelim): 446
length of query: 313
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 291
effective length of database: 17,147,199,772
effective search space: 4989835133652
effective search space used: 4989835133652
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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