ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal30k03 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 208 bits (529), Expect = 3e-54 Identities = 96/114 (84%), Positives = 106/114 (92%) Frame = +3 Query: 3 ARPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVE 182 ARP RKKGYIPL+TYLRT+KVG+YVDVKVNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVE Sbjct: 16 ARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVE 75 Query: 183 INKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKARGEVIXTK 344 +NKQ+GNRIIRKRIHVRVEHVQ SRCAEE +LRK KND+LKA AKA GE I TK Sbjct: 76 VNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTK 129
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 133 bits (335), Expect = 9e-32 Identities = 63/104 (60%), Positives = 80/104 (76%) Frame = +3 Query: 3 ARPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVE 182 AR + G + L+TYL +K+GEYVDV N AVHKGMP K+YHGRTG VWNVTKRAIGVE Sbjct: 16 ARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRAIGVE 75 Query: 183 INKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEA 314 INK+V +RII+KRIHVR++HV+ S C + R +ND++K +A Sbjct: 76 INKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDA 119
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 129 bits (324), Expect = 2e-30 Identities = 60/113 (53%), Positives = 82/113 (72%) Frame = +3 Query: 6 RPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEI 185 R RK G + L+TYL+ YKVG+ VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV I Sbjct: 17 RDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVII 76 Query: 186 NKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKARGEVIXTK 344 NK VGNR + KR+++RVEH++ S+C +E R N +AEAKA+G + K Sbjct: 77 NKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLK 129
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 129 bits (323), Expect = 2e-30 Identities = 60/110 (54%), Positives = 84/110 (76%) Frame = +3 Query: 6 RPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEI 185 R R+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I Sbjct: 17 RGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLI 76 Query: 186 NKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKARGEVI 335 K VGNR + KR++VR+EHV+ S+C ++ R N+ + EAKA+G+ + Sbjct: 77 YKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTV 126
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 129 bits (323), Expect = 2e-30 Identities = 60/110 (54%), Positives = 84/110 (76%) Frame = +3 Query: 6 RPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEI 185 R R+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I Sbjct: 17 RGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLI 76 Query: 186 NKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKARGEVI 335 K VGNR + KR++VR+EHV+ S+C ++ R N+ + EAKA+G+ + Sbjct: 77 YKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTV 126
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 128 bits (322), Expect = 3e-30 Identities = 59/114 (51%), Positives = 81/114 (71%) Frame = +3 Query: 3 ARPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVE 182 +RP RK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ Sbjct: 15 SRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIV 74 Query: 183 INKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKARGEVIXTK 344 +NKQV +I+ KRI+VR+EH++ S+ + R +NDQ K EAK +G + K Sbjct: 75 VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLK 128
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 128 bits (322), Expect = 3e-30 Identities = 59/114 (51%), Positives = 81/114 (71%) Frame = +3 Query: 3 ARPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVE 182 +RP RK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ Sbjct: 15 SRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIV 74 Query: 183 INKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKARGEVIXTK 344 +NKQV +I+ KRI+VR+EH++ S+ + R +NDQ K EAK +G + K Sbjct: 75 VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLK 128
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 128 bits (321), Expect = 4e-30 Identities = 59/113 (52%), Positives = 82/113 (72%) Frame = +3 Query: 6 RPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEI 185 R RK G + ++TYL+ YKVG+ VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV I Sbjct: 17 RDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVII 76 Query: 186 NKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKARGEVIXTK 344 NK VGNR + KR+++RVEH++ S+C +E R N +AEAKA+G + K Sbjct: 77 NKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLK 129
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 128 bits (321), Expect = 4e-30 Identities = 59/114 (51%), Positives = 81/114 (71%) Frame = +3 Query: 3 ARPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVE 182 +RP RK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ Sbjct: 15 SRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGII 74 Query: 183 INKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKARGEVIXTK 344 +NKQV +I+ KRI+VR+EH++ S+ + R +NDQ K EAK +G + K Sbjct: 75 VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLK 128
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 127 bits (319), Expect = 7e-30 Identities = 58/108 (53%), Positives = 79/108 (73%) Frame = +3 Query: 3 ARPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVE 182 +RP RK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ Sbjct: 15 SRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGII 74 Query: 183 INKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKARG 326 +NKQV +I+ KRI+VR+EH++ S+ + R +NDQ K EAK +G Sbjct: 75 VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKG 122
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 115 bits (289), Expect = 2e-26 Identities = 53/111 (47%), Positives = 76/111 (68%) Frame = +3 Query: 3 ARPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVE 182 AR RK G L+TY YK G+ VD+K NGA KGMP K YHGRTGR++NVT+ A+G+ Sbjct: 15 ARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAVGII 74 Query: 183 INKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKARGEVI 335 +NK+V I+ KRI++R+EH++PS+C + R ND+ + AK+ G+ + Sbjct: 75 VNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPV 125
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 108 bits (269), Expect = 4e-24 Identities = 52/111 (46%), Positives = 71/111 (63%), Gaps = 7/111 (6%) Frame = +3 Query: 6 RPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEI 185 RP R G +T L TYKVG+YV + N ++ G+P+K +HG+TGRVWNV AIGV + Sbjct: 17 RPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMV 76 Query: 186 NKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKV-------KNDQLKAEAK 317 NK+V NRI+ KR+H+ EH++PS C ++ RK +N QLK E K Sbjct: 77 NKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGK 127
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 106 bits (264), Expect = 2e-23 Identities = 49/107 (45%), Positives = 75/107 (70%) Frame = +3 Query: 3 ARPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVE 182 ++ R++G IPL YL YK G+ VD+K +G+V K PHK YHG+TGR++NVT+ A+G+ Sbjct: 14 SKKFRERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQHAVGII 73 Query: 183 INKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKAR 323 +NKQV RII KRI+VR+EH++ S+ R +N++ + EA+ + Sbjct: 74 VNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREK 120
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 104 bits (260), Expect = 5e-23 Identities = 48/107 (44%), Positives = 76/107 (71%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 RK G ++ YL Y++G+ VD+ VN A+ KGMPHK+YHGRTGRV++V R++ V + K+ Sbjct: 19 RKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKR 78 Query: 195 VGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKARGEVI 335 V + + K+I VR+EHV+ SRC+EE + R + ++ +A++RG V+ Sbjct: 79 VRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVL 125
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 67.4 bits (163), Expect = 8e-12 Identities = 28/47 (59%), Positives = 35/47 (74%) Frame = +3 Query: 3 ARPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTG 143 +RP RK G +PL TY+R YK G+ VD+K G V KG+PHK YHG+TG Sbjct: 15 SRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGKTG 61
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 63.9 bits (154), Expect = 9e-11 Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Frame = +3 Query: 15 RKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINK 191 R+KG IP L+ + Y GEYV VK+N ++HKGMPH+ YHG+ G V V KR E+ Sbjct: 21 REKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLV--VGKRGKAYEVKV 78 Query: 192 QVGNRIIRKRIHVRVEHVQP 251 +G++ + + VR EH+ P Sbjct: 79 NIGDK--ERVLIVRPEHLIP 96
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 59.7 bits (143), Expect = 2e-09 Identities = 32/80 (40%), Positives = 49/80 (61%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 R++G P+T LR +K GEYV + ++ +VHKGMPH +HGRTG V RA V++ Sbjct: 21 RERGLYPITRALREFKEGEYVHIVIDPSVHKGMPHPRFHGRTGIVVGKQGRAFIVKVRD- 79 Query: 195 VGNRIIRKRIHVRVEHVQPS 254 G + K+I +H++P+ Sbjct: 80 -GGKY--KQIIAYPQHLRPA 96
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 59.7 bits (143), Expect = 2e-09 Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 2/92 (2%) Frame = +3 Query: 6 RPXRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHK-GMPHKFYHGRTGRVWNVTKRAIGV 179 +P R+KG IP L+TYLR Y+VG+ V + +N + GMPH+ +HG TG V V KR Sbjct: 18 KPVREKGSIPRLSTYLREYRVGDKVAIIINPSFPDWGMPHRRFHGLTGTV--VGKRGEAY 75 Query: 180 EINKQVGNRIIRKRIHVRVEHVQPSRCAEEXR 275 E+ +G + RK + V H++P A E R Sbjct: 76 EVEVYLGRK--RKTLFVPPVHLKPLSTAAERR 105
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 55.5 bits (132), Expect = 3e-08 Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%) Frame = +3 Query: 15 RKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINK 191 R++G +P L+ + +K G+YV +K+N +VHKGMPH+ YHG+ G + KR + Sbjct: 21 RERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGKVGVIQG--KRGKAYIVRV 78 Query: 192 QVGNRIIRKRIHVRVEHV 245 +G++ K I VR EH+ Sbjct: 79 TLGDK--EKVIIVRPEHL 94
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 54.7 bits (130), Expect = 6e-08 Identities = 28/81 (34%), Positives = 47/81 (58%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR + Sbjct: 21 RRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVEVP 78 Query: 195 VGNRIIRKRIHVRVEHVQPSR 257 GN++ K + + H++P + Sbjct: 79 DGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 54.7 bits (130), Expect = 6e-08 Identities = 28/81 (34%), Positives = 47/81 (58%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR + Sbjct: 21 RRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVEVP 78 Query: 195 VGNRIIRKRIHVRVEHVQPSR 257 GN++ K + + H++P + Sbjct: 79 DGNKV--KTLFIHPVHLRPQK 97
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 53.5 bits (127), Expect = 1e-07 Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Frame = +3 Query: 15 RKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINK 191 R++G +P L+ + YK G+ V VK+N +VH+GMPH+ Y G+ G++ + KR ++ Sbjct: 21 RERGAVPSLSKLMVEYKEGDNVVVKINPSVHQGMPHRRYQGKVGKI--IGKRGRAYLVSV 78 Query: 192 QVGNRIIRKRIHVRVEHVQP 251 +G++ K I VR EH+ P Sbjct: 79 TLGDK--EKVIIVRPEHLVP 96
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 53.1 bits (126), Expect = 2e-07 Identities = 31/84 (36%), Positives = 47/84 (55%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 R++G PL + ++ G+ V + ++ +VHKGMPH YHGRTG V RA V+I Sbjct: 21 RERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHGRTGEVVGRQGRAYIVKIRD- 79 Query: 195 VGNRIIRKRIHVRVEHVQPSRCAE 266 G + K++ V EH++P E Sbjct: 80 -GGK--EKKLIVYPEHLKPQEQPE 100
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 53.1 bits (126), Expect = 2e-07 Identities = 27/81 (33%), Positives = 48/81 (59%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR + + Sbjct: 21 RRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGEAYIVEIK 78 Query: 195 VGNRIIRKRIHVRVEHVQPSR 257 G+++ K + + H++P + Sbjct: 79 DGSKV--KTLFIHPVHLRPQK 97
>RL21_PYRKO (Q5JI51) 50S ribosomal protein L21e| Length = 98 Score = 51.2 bits (121), Expect = 6e-07 Identities = 27/81 (33%), Positives = 45/81 (55%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V V KR + Sbjct: 21 RRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVQIT 78 Query: 195 VGNRIIRKRIHVRVEHVQPSR 257 G ++ K + H++P + Sbjct: 79 DGGKV--KTFFIHPVHLRPQK 97
>RL21_METMP (Q6M125) 50S ribosomal protein L21e| Length = 97 Score = 50.8 bits (120), Expect = 8e-07 Identities = 30/81 (37%), Positives = 46/81 (56%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 R+KG PLT L+ Y G+ V V ++ +V KGMPH +HG+TG V V +R + + Sbjct: 20 RQKGMAPLTRALKCYTEGDLVHVVLDPSVQKGMPHPKFHGKTGVV--VAQRGSSFLVRVK 77 Query: 195 VGNRIIRKRIHVRVEHVQPSR 257 G + K I R +H++ S+ Sbjct: 78 DGGKY--KDIIARPQHLRESK 96
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 48.9 bits (115), Expect = 3e-06 Identities = 26/81 (32%), Positives = 48/81 (59%) Frame = +3 Query: 6 RPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEI 185 RP R P+T ++++ G+ V + ++ ++H+G PH +HG+TGRV + ++ V + Sbjct: 20 RPGRSN---PITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGKTGRVVGMMGKSYVVAL 76 Query: 186 NKQVGNRIIRKRIHVRVEHVQ 248 GN+ K++ VR EH+Q Sbjct: 77 KD--GNK--DKQLVVRPEHLQ 93
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 47.4 bits (111), Expect = 9e-06 Identities = 29/79 (36%), Positives = 46/79 (58%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 R+KG + + +L+T+ VG+ V + + A KGMPH + GRTG V RA V++ Sbjct: 21 REKG-VRIRKFLQTFDVGQRVHIDIEPASQKGMPHPRFQGRTGVVIGQRGRAYLVQVRD- 78 Query: 195 VGNRIIRKRIHVRVEHVQP 251 G ++ K + VR EH++P Sbjct: 79 -GGKM--KTLIVRPEHLKP 94
>RL21_METAC (Q8TQU3) 50S ribosomal protein L21e| Length = 97 Score = 41.6 bits (96), Expect = 5e-04 Identities = 21/81 (25%), Positives = 46/81 (56%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 R++G P++ ++ ++ G+ V + ++ +V KGMP+ + G TG+V R+ +E+ Sbjct: 20 RERGISPVSRAIQEFEEGQMVHIDIDPSVQKGMPNPKFQGSTGKVIGQRGRSYVLEVRS- 78 Query: 195 VGNRIIRKRIHVRVEHVQPSR 257 GN + K + +H++P + Sbjct: 79 -GNAM--KEVFSLPQHLKPQK 96
>RL21_XENLA (P49628) 60S ribosomal protein L21 (Fragment)| Length = 33 Score = 41.6 bits (96), Expect = 5e-04 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = +3 Query: 6 RPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAV 101 RP RK G +PL+TY+R YK G+ VD+K G + Sbjct: 1 RPFRKHGAVPLSTYMRIYKKGDIVDIKGMGTI 32
>RL21_PYRAE (Q8ZTB5) 50S ribosomal protein L21e| Length = 100 Score = 39.3 bits (90), Expect = 0.002 Identities = 25/79 (31%), Positives = 41/79 (51%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 R+KG L+ L YKVG+ V + ++ PH+ Y G+ G V + RA +E Sbjct: 21 REKGLSGLSRLLYEYKVGDKVIIDIDSTFISTAPHRRYQGKVGTVVGIRGRAYVIE--TF 78 Query: 195 VGNRIIRKRIHVRVEHVQP 251 +G++ +K I EH++P Sbjct: 79 LGDK--KKIIITTPEHLKP 95
>RL21_METMA (Q8PU21) 50S ribosomal protein L21e| Length = 97 Score = 37.7 bits (86), Expect = 0.007 Identities = 20/81 (24%), Positives = 46/81 (56%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 R++G P++ ++ ++ G+ V + ++ +V KGMP+ + G TG+V + +R + + Sbjct: 20 RERGISPVSKAIQEFEDGQMVHIDIDPSVQKGMPNPKFQGFTGKV--IGQRGRSYILAVR 77 Query: 195 VGNRIIRKRIHVRVEHVQPSR 257 GN + K + +H++P + Sbjct: 78 EGNSM--KEVFSVPQHLKPQK 96
>RL21_PICTO (Q6L228) 50S ribosomal protein L21e| Length = 97 Score = 37.4 bits (85), Expect = 0.009 Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 3/76 (3%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 + KG + ++T++VG+ + +N AV GMPH + G TG + + + ++ + Sbjct: 21 KNKGMPKVNEMMKTFEVGDRAAIVINSAVPDGMPHHDFQGITGVITGM--QGSCYILSFK 78 Query: 195 VGN---RIIRKRIHVR 233 VGN ++I +H+R Sbjct: 79 VGNVEKKVIAAPVHLR 94
>RL21_NANEQ (Q74N21) 50S ribosomal protein L21e| Length = 98 Score = 35.8 bits (81), Expect = 0.027 Identities = 22/78 (28%), Positives = 38/78 (48%) Frame = +3 Query: 15 RKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQ 194 R++G + +T L+ + + V + + + H GMPH YHG G V V KR E+ + Sbjct: 22 RQRGKLTITRILQKFNNNDKVAIVIEPSWHYGMPHPRYHGLVGTV--VGKRGNCYEVELE 79 Query: 195 VGNRIIRKRIHVRVEHVQ 248 +K + V H++ Sbjct: 80 FNGE--KKLLIVHPAHLK 95
>RL21_THEVO (Q97BZ1) 50S ribosomal protein L21e| Length = 98 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 2/79 (2%) Frame = +3 Query: 3 ARPXRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRA--IG 176 ++ RKK I ++ + G+ V + + +VH GMP+ + G TG V +G Sbjct: 19 SKEERKKSIIG--RMMQEFSPGDRVAIDIEPSVHNGMPYHRFQGYTGIVEGAQGNCYKVG 76 Query: 177 VEINKQVGNRIIRKRIHVR 233 V++ + +I +H++ Sbjct: 77 VKVG-SLTKYVIASPVHLK 94
>RL21_THEAC (Q9HIN8) 50S ribosomal protein L21e| Length = 98 Score = 29.6 bits (65), Expect = 1.9 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = +3 Query: 45 YLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 149 +++ ++ G+ V + + +VH GMP+ + G TG V Sbjct: 31 FMQEFEPGDRVAIDIEPSVHAGMPYHRFQGYTGVV 65
>OXA11_SCHPO (O14300) Inner membrane protein oxa1-1, mitochondrial precursor| (Cytochrome oxidase biogenesis protein 1-1) (Sp1) Length = 374 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = -3 Query: 310 SALSWSFFTFLRRNSSAHLDGCTCSTRTWILFLMMRFPTCLL 185 SA+ +SFF +R+ S +DG T W L + P C+L Sbjct: 170 SAVFFSFFYAIRKMSRLSVDGFTTGGLAWFKDLSIPDPYCIL 211
>LEPA_THETN (Q8RB72) GTP-binding protein lepA| Length = 603 Score = 28.9 bits (63), Expect = 3.3 Identities = 32/124 (25%), Positives = 48/124 (38%), Gaps = 11/124 (8%) Frame = +3 Query: 3 ARPXRKKGYIPLTTYLRTYKVGEYV--DVKVNGAVHKGMP---HKFYHGRTGRVW----- 152 A R +GY L + YK + V D+ VNG V + HK GR Sbjct: 462 ALKSRTRGYASLDYEFKGYKKSDLVKLDILVNGEVVDALSMIVHKDKAYEKGRKIVEKLK 521 Query: 153 -NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKARGE 329 N+ + + I +G+RII + + ++C RK K + + E K R Sbjct: 522 ENIPRHLFEIPIQAAIGSRIIARETVKALRKNVLAKCYGGDVTRKKKLLEKQKEGKKRMR 581 Query: 330 VIXT 341 I T Sbjct: 582 QIGT 585
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 28.5 bits (62), Expect = 4.3 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 201 NRIIRKRIHVRVEHVQPSRCAEEXRLR 281 NRI +RIH+ +H Q ++C E R R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>RNPA_COREF (Q8FSU8) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 133 Score = 28.1 bits (61), Expect = 5.6 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +3 Query: 132 GRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 245 G G V + G+ ++K VGN +IR R R+ HV Sbjct: 44 GEKGEVASFGGPRFGLIVSKAVGNAVIRHRTSRRLRHV 81
>LEPA_RICTY (Q68X95) GTP-binding protein lepA| Length = 600 Score = 28.1 bits (61), Expect = 5.6 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 13/114 (11%) Frame = +3 Query: 21 KGYIPLTTYLRTYKVGEYVDVK--VNGAVHKGMP---HKFYHGRTGRVWNVT------KR 167 KGY + Y++ + V+++ VNG V + H+ + GR V ++ Sbjct: 466 KGYASFEWQMDVYELSDLVNLRILVNGEVVDALSTIVHRSRAEQRGRALCVRLKDLIPRQ 525 Query: 168 AIGVEINKQVGNRIIRKRIHVRVEHVQPSRC--AEEXRLRKVKNDQLKAEAKAR 323 I + I VGNRII + + S+C + R RK+ Q + K R Sbjct: 526 QIDIAIQASVGNRIIARETIKALRKDVLSKCYGGDISRKRKLLEKQKAGKKKMR 579
>RNPA_STRA5 (Q8E1E7) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 109 Score = 28.1 bits (61), Expect = 5.6 Identities = 8/25 (32%), Positives = 18/25 (72%) Frame = +3 Query: 171 IGVEINKQVGNRIIRKRIHVRVEHV 245 +G+ ++K++GN ++R I ++ HV Sbjct: 42 VGISVSKKLGNAVVRNAIKRKIRHV 66
>RNPA_STRA3 (Q8E6W5) Ribonuclease P protein component (EC 3.1.26.5) (RNaseP| protein) (RNase P protein) (Protein C5) Length = 109 Score = 28.1 bits (61), Expect = 5.6 Identities = 8/25 (32%), Positives = 18/25 (72%) Frame = +3 Query: 171 IGVEINKQVGNRIIRKRIHVRVEHV 245 +G+ ++K++GN ++R I ++ HV Sbjct: 42 VGISVSKKLGNAVVRNAIKRKIRHV 66
>RL24_PROMP (Q7UZV5) 50S ribosomal protein L24| Length = 118 Score = 27.7 bits (60), Expect = 7.3 Identities = 10/26 (38%), Positives = 19/26 (73%) Frame = +3 Query: 201 NRIIRKRIHVRVEHVQPSRCAEEXRL 278 NR++ K +++R +HV+PS+ E R+ Sbjct: 46 NRVVVKGVNLRTKHVKPSQEGESGRI 71
>YAE1_SCHPO (Q09842) Hypothetical PWWP domain protein C23D3.01| Length = 407 Score = 27.3 bits (59), Expect = 9.6 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 4/33 (12%) Frame = +3 Query: 6 RPXRKKG----YIPLTTYLRTYKVGEYVDVKVN 92 R +KKG Y+P T+ ++YK GEYV K++ Sbjct: 40 RDVKKKGKQLAYVPRTSPRKSYKNGEYVLAKMS 72
>TNNT2_BOVIN (P13789) Troponin T, cardiac muscle (TnTc) (Cardiac muscle troponin| T) (cTnT) Length = 284 Score = 27.3 bits (59), Expect = 9.6 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +3 Query: 183 INKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKAR 323 I K+ R ++RI E + +R AEE R+ + + KAE +AR Sbjct: 124 IEKRRAERAEQQRIRAEREKERQTRLAEERARREEEESRRKAEDEAR 170
>RL24_PROMM (Q7V534) 50S ribosomal protein L24| Length = 118 Score = 27.3 bits (59), Expect = 9.6 Identities = 15/65 (23%), Positives = 31/65 (47%) Frame = +3 Query: 84 KVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCA 263 ++ +HKG + G+ R + +E NR+I + +++R HV+P++ Sbjct: 13 RIKMRIHKGDTVQVITGKDKGKTGEVLRTLPIE------NRVIVQGVNIRTRHVKPTQEG 66 Query: 264 EEXRL 278 E R+ Sbjct: 67 ESGRI 71
>TNNT2_SHEEP (P50751) Troponin T, cardiac muscle (TnTc) (Cardiac muscle troponin| T) (cTnT) Length = 286 Score = 27.3 bits (59), Expect = 9.6 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +3 Query: 183 INKQVGNRIIRKRIHVRVEHVQPSRCAEEXRLRKVKNDQLKAEAKAR 323 I K+ R ++RI E + +R AEE R+ + + KAE +AR Sbjct: 126 IEKRRAERAEQQRIRTEREKERQARLAEERARREEEESRRKAEDEAR 172
>GCSP_ANASP (Q8YNF9) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 983 Score = 27.3 bits (59), Expect = 9.6 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = -1 Query: 327 HHVPWLPP*AGHSSLSSGXTPQHTWMAAHAQHGHGS 220 H VP+LP GH L SG PQ+ A A G S Sbjct: 752 HLVPFLP---GHPVLESGKNPQNIGAVAAAPWGSAS 784
>ERFK_SALTY (P40680) Protein erfK/srfK precursor| Length = 309 Score = 27.3 bits (59), Expect = 9.6 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Frame = +3 Query: 18 KKGYIPLTTYLRTYKVGEYVDV-KVNGAVHK--GMPHKFYHGRTG 143 KK +P+T LRT+ G+ VD +VN + + GMP GR G Sbjct: 264 KKVPLPVTPVLRTFIKGDDVDTSRVNEVLERRSGMPVNISAGRPG 308 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,965,637 Number of Sequences: 219361 Number of extensions: 725330 Number of successful extensions: 2105 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 2080 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2104 length of database: 80,573,946 effective HSP length: 90 effective length of database: 60,831,456 effective search space used: 1459954944 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
