| Clone Name | baal30k03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196917.1| Oryza sativa (japonica cultivar-group) 60S ribosomal protein L21 (OSJNBa0006L06.3), mRNA Length = 783 Score = 466 bits (235), Expect = e-128 Identities = 304/328 (92%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||| Sbjct: 138 aagaaggggtacatcccgctcaccacctacctccgcacctacaagatcggcgagcacgtc 197 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 198 gacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagttctaccacggccgc 257 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 258 accggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggtt 317 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 318 gggaaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccatccagg 377 Query: 258 tgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaagccaag 317 || |||||||||| ||||||||||| | ||||| |||||||||||||| || |||||| Sbjct: 378 tgcactgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatgccaag 437 Query: 318 gcacgtggtgaggtcatcancaccaaga 345 || |||||||||||||||| ||| |||| Sbjct: 438 gctcgtggtgaggtcatcagcacgaaga 465
>gb|AF093630.1|AF093630 Oryza sativa 60S ribosomal protein L21 (RPL21) mRNA, complete cds Length = 753 Score = 466 bits (235), Expect = e-128 Identities = 304/328 (92%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||| Sbjct: 77 aagaaggggtacatcccgctcaccacctacctccgcacctacaagatcggcgagcacgtc 136 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 137 gacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagttctaccacggccgc 196 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 197 accggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggtt 256 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || |||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct: 257 gggaaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccatccagg 316 Query: 258 tgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaagccaag 317 || |||||||||| ||||||||||| | ||||| |||||||||||||| || |||||| Sbjct: 317 tgcactgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatgccaag 376 Query: 318 gcacgtggtgaggtcatcancaccaaga 345 || |||||||||||||||| ||| |||| Sbjct: 377 gctcgtggtgaggtcatcagcacgaaga 404
>gb|AF475114.1| Triticum aestivum 60s ribosomal protein L21 mRNA, partial cds Length = 519 Score = 400 bits (202), Expect = e-108 Identities = 308/345 (89%) Strand = Plus / Plus Query: 1 tcgcgcgccccttncgtaagaagggttacatcccgctcaccacctacctgcgcacctaca 60 ||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 68 tcgcgcggcccttccgtaagaaggggtacatcccgctcaccacctacctgcgcacctaca 127 Query: 61 aggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcaca 120 ||||||| ||| |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 128 aggtcggggagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcaca 187 Query: 121 agttctaccacggccgcaccggacgcgtgtggaacgtcaccaagcgcgccatcggcgtng 180 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | Sbjct: 188 agttctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcg 247 Query: 181 agatcaacaagcaggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagc 240 |||||||||||||||| || ||| | ||||||| ||| ||||||||||| ||||| |||| Sbjct: 248 agatcaacaagcaggtcggcaacaggatcatcaagaagaggatccatgtgcgtgtggagc 307 Query: 241 atgtgcagccatccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgaccagc 300 | ||||||||||||||||| |||||||| | || ||||||| | || |||||| ||| Sbjct: 308 acgtgcagccatccaggtgcaacgaggagttcctccagaggaaactcaacaatgacaagc 367 Query: 301 tcaaggcggaagccaaggcacgtggtgaggtcatcancaccaaga 345 | || ||||| |||||||| ||||| |||||||||| ||| |||| Sbjct: 368 tgaangcggaggccaaggcgcgtggcgaggtcatcagcacgaaga 412
>gb|BT016206.1| Zea mays clone Contig39 mRNA sequence Length = 748 Score = 398 bits (201), Expect = e-108 Identities = 308/345 (89%) Strand = Plus / Plus Query: 1 tcgcgcgccccttncgtaagaagggttacatcccgctcaccacctacctgcgcacctaca 60 ||||||| ||||| || |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 107 tcgcgcggcccttccgcaagaaggggtacatcccgctcaccacgtacctgcgcacctaca 166 Query: 61 aggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcaca 120 || ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 167 agatcggcgactacgtcgacgtcaaggttaacggcgccgtgcacaagggcatgccgcaca 226 Query: 121 agttctaccacggccgcaccggacgcgtgtggaacgtcaccaagcgcgccatcggcgtng 180 |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| | Sbjct: 227 agttctaccacggccgcaccgggagcgtctggaacgtcaccaagcgcgccatcggcgtcg 286 Query: 181 agatcaacaagcaggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagc 240 ||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| Sbjct: 287 agatcaacaagcaggttaatggccgcatcatcaggaagcggatccatgtccgtgtggagc 346 Query: 241 atgtgcagccatccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgaccagc 300 |||||||||| ||| | || | |||||||| ||||||||||||| ||||||||||||| Sbjct: 347 atgtgcagccctcccgttgcacagaggagttccgcctgaggaaagccaagaatgaccagc 406 Query: 301 tcaaggcggaagccaaggcacgtggtgaggtcatcancaccaaga 345 |||||||||| |||||| || |||||||| |||| |||||||| Sbjct: 407 tcaaggcggatgccaagctccgcggtgaggtgatcagcaccaaga 451
>gb|AY105020.1| Zea mays PCO098402 mRNA sequence Length = 784 Score = 398 bits (201), Expect = e-108 Identities = 308/345 (89%) Strand = Plus / Plus Query: 1 tcgcgcgccccttncgtaagaagggttacatcccgctcaccacctacctgcgcacctaca 60 ||||||| ||||| || |||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 143 tcgcgcggcccttccgcaagaaggggtacatcccactcaccacgtacctgcgcacctaca 202 Query: 61 aggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcaca 120 || ||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 203 agatcggcgactacgtcgacgtcaaggttaacggcgccgtgcacaagggcatgccgcaca 262 Query: 121 agttctaccacggccgcaccggacgcgtgtggaacgtcaccaagcgcgccatcggcgtng 180 |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| | Sbjct: 263 agttctaccacggccgcaccgggagcgtctggaacgtcaccaagcgcgccatcggcgtcg 322 Query: 181 agatcaacaagcaggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagc 240 ||||||||||||||||| ||||||||||||||| ||||||||||||| || |||| Sbjct: 323 agatcaacaagcaggttaatggccgcatcatcaggaagcggatccatgtccgcgtggagc 382 Query: 241 atgtgcagccatccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgaccagc 300 |||||||||| ||| | || | |||||||| ||||||||||||| ||||||||||||| Sbjct: 383 atgtgcagccctcccgttgcacagaggagttccgcctgaggaaagccaagaatgaccagc 442 Query: 301 tcaaggcggaagccaaggcacgtggtgaggtcatcancaccaaga 345 |||||||||| |||||||| || |||||||| |||| |||||||| Sbjct: 443 tcaaggcggatgccaaggcccgcggtgaggtgatcagcaccaaga 487
>gb|AY107603.1| Zea mays PCO098394 mRNA sequence Length = 965 Score = 375 bits (189), Expect = e-101 Identities = 305/345 (88%) Strand = Plus / Plus Query: 1 tcgcgcgccccttncgtaagaagggttacatcccgctcaccacctacctgcgcacctaca 60 ||||||| || || || |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 161 tcgcgcggccgttccgcaagaagggttacatcccgctcaccacgtacctgcgcacctaca 220 Query: 61 aggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcaca 120 || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 221 agatcggcgactacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcaca 280 Query: 121 agttctaccacggccgcaccggacgcgtgtggaacgtcaccaagcgcgccatcggcgtng 180 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | Sbjct: 281 agttctaccacggccgcaccggtcgcgtctggaacgtcaccaagcgcgccatcggcgttg 340 Query: 181 agatcaacaagcaggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagc 240 ||||||||||||||||| ||||||||||||||| | |||||||||||||| |||| Sbjct: 341 agatcaacaagcaggttaatggccgcatcatcaggaagcgtatccatgtccgtgtggagc 400 Query: 241 atgtgcagccatccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgaccagc 300 |||||||||| ||| | || | |||||||| ||| ||||||||| ||||| || |||| Sbjct: 401 atgtgcagccctcccgttgcacagaggagttccgcttgaggaaagccaagaacgatcagc 460 Query: 301 tcaaggcggaagccaaggcacgtggtgaggtcatcancaccaaga 345 |||||| || ||||||| ||||| ||||| |||| |||||||| Sbjct: 461 tcaaggttgatgccaaggaccgtggcgaggtgatcagcaccaaga 505
>gb|AF457939.1| Zea mays clone cho1c.pk003.g2, mRNA sequence Length = 526 Score = 299 bits (151), Expect = 3e-78 Identities = 264/300 (88%), Gaps = 2/300 (0%) Strand = Plus / Plus Query: 1 tcgcgcgccccttncgtaagaagggttacatcccgctcaccacctacctgcgcacctaca 60 ||||||||||||| || |||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 81 tcgcgcgccccttccgcaagaagggctacatcccgctcaccacctacctccgcacctaca 140 Query: 61 aggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcaca 120 || ||||||| |||||||| |||||||||||||||||||| |||||||| |||||||||| Sbjct: 141 agatcggcgattacgtcgatgtcaaggtgaacggcgccgtccacaaggggatgccgcaca 200 Query: 121 agttctaccacggccgcaccggacgcgtgtggaacgtcaccaagcgcgccatcggcgtng 180 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | Sbjct: 201 agttctaccacggccgcaccggtcgcgtctggaacgtcaccaagcgcgccatcggcgtcg 260 Query: 181 agatcaac-aagcaggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgag 239 || ||||| |||||||| |||||||||||||| | |||||||||||||| ||| Sbjct: 261 aggtcaacaaagcaggtcaatgggcgcatcatcaggaagcgtatccatgtccgtgtggag 320 Query: 240 catgtgc-agccatccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgacca 298 ||||||| |||| ||| | || | || ||||| ||||||||||| | |||||||||||| Sbjct: 321 catgtgcaagccgtcccgctgcacagaagagttccgcctgaggaaggcgaagaatgacca 380
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 293 bits (148), Expect = 2e-76 Identities = 171/179 (95%) Strand = Plus / Minus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||| Sbjct: 15251 aagaaggggtacatcccgctcaccacctacctccgcacctacaagatcggcgagcacgtc 15192 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 15191 gacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagttctaccacggccgc 15132 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggt 196 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 15131 accggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 15073 Score = 180 bits (91), Expect = 2e-42 Identities = 137/153 (89%) Strand = Plus / Minus Query: 193 aggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccat 252 ||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 14341 aggttgggaaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccat 14282 Query: 253 ccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaag 312 ||||||| |||||||||| ||||||||||| | ||||| |||||||||||||| || | Sbjct: 14281 ccaggtgcactgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatg 14222 Query: 313 ccaaggcacgtggtgaggtcatcancaccaaga 345 ||||||| |||||||||||||||| ||| |||| Sbjct: 14221 ccaaggctcgtggtgaggtcatcagcacgaaga 14189
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 293 bits (148), Expect = 2e-76 Identities = 171/179 (95%) Strand = Plus / Minus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||| Sbjct: 16670734 aagaaggggtacatcccgctcaccacctacctccgcacctacaagatcggcgagcacgtc 16670675 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 16670674 gacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagttctaccacggccgc 16670615 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggt 196 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 16670614 accggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 16670556 Score = 180 bits (91), Expect = 2e-42 Identities = 137/153 (89%) Strand = Plus / Minus Query: 193 aggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccat 252 ||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 16669824 aggttgggaaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccat 16669765 Query: 253 ccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaag 312 ||||||| |||||||||| ||||||||||| | ||||| |||||||||||||| || | Sbjct: 16669764 ccaggtgcactgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatg 16669705 Query: 313 ccaaggcacgtggtgaggtcatcancaccaaga 345 ||||||| |||||||||||||||| ||| |||| Sbjct: 16669704 ccaaggctcgtggtgaggtcatcagcacgaaga 16669672
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 293 bits (148), Expect = 2e-76 Identities = 171/179 (95%) Strand = Plus / Minus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||| ||||||||||||||||||||||| |||||||||||| |||||||| ||||| Sbjct: 16679774 aagaaggggtacatcccgctcaccacctacctccgcacctacaagatcggcgagcacgtc 16679715 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 16679714 gacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagttctaccacggccgc 16679655 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggt 196 ||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 16679654 accggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagcaggt 16679596 Score = 180 bits (91), Expect = 2e-42 Identities = 137/153 (89%) Strand = Plus / Minus Query: 193 aggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccat 252 ||||||| |||||||| |||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 16678864 aggttgggaaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccat 16678805 Query: 253 ccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaag 312 ||||||| |||||||||| ||||||||||| | ||||| |||||||||||||| || | Sbjct: 16678804 ccaggtgcactgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatg 16678745 Query: 313 ccaaggcacgtggtgaggtcatcancaccaaga 345 ||||||| |||||||||||||||| ||| |||| Sbjct: 16678744 ccaaggctcgtggtgaggtcatcagcacgaaga 16678712
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 289 bits (146), Expect = 3e-75 Identities = 183/196 (93%) Strand = Plus / Plus Query: 1 tcgcgcgccccttncgtaagaagggttacatcccgctcaccacctacctgcgcacctaca 60 ||||||| || || || ||||||||||||||||||||||||||||||||| | || |||| Sbjct: 2246822 tcgcgcggccgttccgcaagaagggttacatcccgctcaccacctacctgaggacgtaca 2246881 Query: 61 aggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcaca 120 || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2246882 agatcggcgattacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcaca 2246941 Query: 121 agttctaccacggccgcaccggacgcgtgtggaacgtcaccaagcgcgccatcggcgtng 180 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | Sbjct: 2246942 agttctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcg 2247001 Query: 181 agatcaacaagcaggt 196 |||||||||||||||| Sbjct: 2247002 agatcaacaagcaggt 2247017 Score = 159 bits (80), Expect = 7e-36 Identities = 135/154 (87%) Strand = Plus / Plus Query: 192 caggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagcca 251 ||||| || ||||||||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 2248074 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 2248133 Query: 252 tccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaa 311 |||||||| | |||||| | |||||||||||| | ||||| || ||||||||||| || Sbjct: 2248134 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 2248193 Query: 312 gccaaggcacgtggtgaggtcatcancaccaaga 345 |||||||| ||||||||||| |||| |||||||| Sbjct: 2248194 gccaaggcccgtggtgaggttatcagcaccaaga 2248227
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 289 bits (146), Expect = 3e-75 Identities = 183/196 (93%) Strand = Plus / Plus Query: 1 tcgcgcgccccttncgtaagaagggttacatcccgctcaccacctacctgcgcacctaca 60 ||||||| || || || ||||||||||||||||||||||||||||||||| | || |||| Sbjct: 137116 tcgcgcggccgttccgcaagaagggttacatcccgctcaccacctacctgaggacgtaca 137175 Query: 61 aggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcaca 120 || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 137176 agatcggcgattacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcaca 137235 Query: 121 agttctaccacggccgcaccggacgcgtgtggaacgtcaccaagcgcgccatcggcgtng 180 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | Sbjct: 137236 agttctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcg 137295 Query: 181 agatcaacaagcaggt 196 |||||||||||||||| Sbjct: 137296 agatcaacaagcaggt 137311 Score = 159 bits (80), Expect = 7e-36 Identities = 135/154 (87%) Strand = Plus / Plus Query: 192 caggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagcca 251 ||||| || ||||||||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 138368 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 138427 Query: 252 tccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaa 311 |||||||| | |||||| | |||||||||||| | ||||| || ||||||||||| || Sbjct: 138428 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 138487 Query: 312 gccaaggcacgtggtgaggtcatcancaccaaga 345 |||||||| ||||||||||| |||| |||||||| Sbjct: 138488 gccaaggcccgtggtgaggttatcagcaccaaga 138521
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 289 bits (146), Expect = 3e-75 Identities = 183/196 (93%) Strand = Plus / Minus Query: 1 tcgcgcgccccttncgtaagaagggttacatcccgctcaccacctacctgcgcacctaca 60 ||||||| || || || ||||||||||||||||||||||||||||||||| | || |||| Sbjct: 79234 tcgcgcggccgttccgcaagaagggttacatcccgctcaccacctacctgaggacgtaca 79175 Query: 61 aggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcaca 120 || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 79174 agatcggcgattacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcaca 79115 Query: 121 agttctaccacggccgcaccggacgcgtgtggaacgtcaccaagcgcgccatcggcgtng 180 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | Sbjct: 79114 agttctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcg 79055 Query: 181 agatcaacaagcaggt 196 |||||||||||||||| Sbjct: 79054 agatcaacaagcaggt 79039 Score = 159 bits (80), Expect = 7e-36 Identities = 135/154 (87%) Strand = Plus / Minus Query: 192 caggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagcca 251 ||||| || ||||||||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 77982 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 77923 Query: 252 tccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaa 311 |||||||| | |||||| | |||||||||||| | ||||| || ||||||||||| || Sbjct: 77922 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 77863 Query: 312 gccaaggcacgtggtgaggtcatcancaccaaga 345 |||||||| ||||||||||| |||| |||||||| Sbjct: 77862 gccaaggcccgtggtgaggttatcagcaccaaga 77829
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 289 bits (146), Expect = 3e-75 Identities = 183/196 (93%) Strand = Plus / Plus Query: 1 tcgcgcgccccttncgtaagaagggttacatcccgctcaccacctacctgcgcacctaca 60 ||||||| || || || ||||||||||||||||||||||||||||||||| | || |||| Sbjct: 2246834 tcgcgcggccgttccgcaagaagggttacatcccgctcaccacctacctgaggacgtaca 2246893 Query: 61 aggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcaca 120 || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2246894 agatcggcgattacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcaca 2246953 Query: 121 agttctaccacggccgcaccggacgcgtgtggaacgtcaccaagcgcgccatcggcgtng 180 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | Sbjct: 2246954 agttctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcg 2247013 Query: 181 agatcaacaagcaggt 196 |||||||||||||||| Sbjct: 2247014 agatcaacaagcaggt 2247029 Score = 159 bits (80), Expect = 7e-36 Identities = 135/154 (87%) Strand = Plus / Plus Query: 192 caggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagcca 251 ||||| || ||||||||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 2248086 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 2248145 Query: 252 tccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaa 311 |||||||| | |||||| | |||||||||||| | ||||| || ||||||||||| || Sbjct: 2248146 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 2248205 Query: 312 gccaaggcacgtggtgaggtcatcancaccaaga 345 |||||||| ||||||||||| |||| |||||||| Sbjct: 2248206 gccaaggcccgtggtgaggttatcagcaccaaga 2248239
>dbj|AK120267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047I10, full insert sequence Length = 2007 Score = 289 bits (146), Expect = 3e-75 Identities = 183/196 (93%) Strand = Plus / Plus Query: 1 tcgcgcgccccttncgtaagaagggttacatcccgctcaccacctacctgcgcacctaca 60 ||||||| || || || ||||||||||||||||||||||||||||||||| | || |||| Sbjct: 124 tcgcgcggccgttccgcaagaagggttacatcccgctcaccacctacctgaggacgtaca 183 Query: 61 aggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcaca 120 || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 184 agatcggcgattacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcaca 243 Query: 121 agttctaccacggccgcaccggacgcgtgtggaacgtcaccaagcgcgccatcggcgtng 180 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| | Sbjct: 244 agttctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcg 303 Query: 181 agatcaacaagcaggt 196 |||||||||||||||| Sbjct: 304 agatcaacaagcaggt 319 Score = 159 bits (80), Expect = 7e-36 Identities = 135/154 (87%) Strand = Plus / Plus Query: 192 caggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagcca 251 ||||| || ||||||||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct: 1376 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 1435 Query: 252 tccaggtgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaa 311 |||||||| | |||||| | |||||||||||| | ||||| || ||||||||||| || Sbjct: 1436 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 1495 Query: 312 gccaaggcacgtggtgaggtcatcancaccaaga 345 |||||||| ||||||||||| |||| |||||||| Sbjct: 1496 gccaaggcccgtggtgaggttatcagcaccaaga 1529
>dbj|AP004496.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11C13, TM0029a, complete sequence Length = 53909 Score = 168 bits (85), Expect = 7e-39 Identities = 147/168 (87%) Strand = Plus / Plus Query: 29 catcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtcgacgtcaaggt 88 |||||| |||||||||||||| || || ||| ||||||| ||||||||||||| || Sbjct: 14792 catccccctcaccacctacctccgtacgtaccgcatcggcgactacgtcgacgtcagagt 14851 Query: 89 gaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgcaccggacgcgt 148 ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| || || Sbjct: 14852 taacggcgccgtccacaagggtatgcctcacaagttctaccatggccgcaccggtcgtgt 14911 Query: 149 gtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggt 196 ||||| ||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 14912 ctggaatgtcaccaagcgcgccatcggcgtcgaggtcaacaagcaggt 14959
>ref|NM_100841.2| Arabidopsis thaliana structural constituent of ribosome AT1G09690 mRNA, complete cds Length = 755 Score = 165 bits (83), Expect = 1e-37 Identities = 266/328 (81%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||||||||| || ||| | || |||||| | |||| |||||||||||| |||||| Sbjct: 102 aagaagggttacattccactctcgacttacctgagaaccttcaaggtcggcgattacgtc 161 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || || |||||||| || || | |||||||||||||| ||||||||||||||||| || Sbjct: 162 gatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagttctaccacggtcgt 221 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || || | ||||||||||| || |||||| |||| || || ||||||| ||| || Sbjct: 222 actggtcgtatctggaacgtcactaaacgcgccgtcggtgttgaagtcaacaaacagatt 281 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||||| ||| || Sbjct: 282 ggcaacaggatcataaggaagaggattcatgtgcgtgtggagcatgtgcagcaatcaaga 341 Query: 258 tgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaagccaag 317 |||||||||||||| |||||||| ||||||||| |||||||||| | |||||| Sbjct: 342 tgtgctgaggagttcaagctgaggaagaagaagaatgatgagctcaaggctgcagccaaa 401 Query: 318 gcacgtggtgaggtcatcancaccaaga 345 || ||||||| ||||| |||||||| Sbjct: 402 gccaatggtgagaccatcagcaccaaga 429
>gb|AY081656.1| Arabidopsis thaliana similar to ribosomal protein L21 (At1g09690) mRNA, complete cds Length = 538 Score = 165 bits (83), Expect = 1e-37 Identities = 266/328 (81%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||||||||| || ||| | || |||||| | |||| |||||||||||| |||||| Sbjct: 61 aagaagggttacattccactctcgacttacctgagaaccttcaaggtcggcgattacgtc 120 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || || |||||||| || || | |||||||||||||| ||||||||||||||||| || Sbjct: 121 gatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagttctaccacggtcgt 180 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || || | ||||||||||| || |||||| |||| || || ||||||| ||| || Sbjct: 181 actggtcgtatctggaacgtcactaaacgcgccgtcggtgttgaagtcaacaaacagatt 240 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||||| ||| || Sbjct: 241 ggcaacaggatcataaggaagaggattcatgtgcgtgtggagcatgtgcagcaatcaaga 300 Query: 258 tgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaagccaag 317 |||||||||||||| |||||||| ||||||||| |||||||||| | |||||| Sbjct: 301 tgtgctgaggagttcaagctgaggaagaagaagaatgatgagctcaaggctgcagccaaa 360 Query: 318 gcacgtggtgaggtcatcancaccaaga 345 || ||||||| ||||| |||||||| Sbjct: 361 gccaatggtgagaccatcagcaccaaga 388
>gb|AY059923.1| Arabidopsis thaliana Similar to ribosomal protein L21 (At1g09690; F21M12.8) mRNA, complete cds Length = 665 Score = 165 bits (83), Expect = 1e-37 Identities = 266/328 (81%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||||||||| || ||| | || |||||| | |||| |||||||||||| |||||| Sbjct: 102 aagaagggttacattccactctcgacttacctgagaaccttcaaggtcggcgattacgtc 161 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || || |||||||| || || | |||||||||||||| ||||||||||||||||| || Sbjct: 162 gatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagttctaccacggtcgt 221 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || || | ||||||||||| || |||||| |||| || || ||||||| ||| || Sbjct: 222 actggtcgtatctggaacgtcactaaacgcgccgtcggtgttgaagtcaacaaacagatt 281 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||||| ||| || Sbjct: 282 ggcaacaggatcataaggaagaggattcatgtgcgtgtggagcatgtgcagcaatcaaga 341 Query: 258 tgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaagccaag 317 |||||||||||||| |||||||| ||||||||| |||||||||| | |||||| Sbjct: 342 tgtgctgaggagttcaagctgaggaagaagaagaatgatgagctcaaggctgcagccaaa 401 Query: 318 gcacgtggtgaggtcatcancaccaaga 345 || ||||||| ||||| |||||||| Sbjct: 402 gccaatggtgagaccatcagcaccaaga 429
>emb|BX814291.1|CNS0ADUZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 149 bits (75), Expect = 7e-33 Identities = 264/328 (80%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||||||||| || ||| | || |||||| | |||| |||||||||||| |||||| Sbjct: 89 aagaagggttacattccactctcgacttacctgagaaccttcaaggtcggcgattacgtc 148 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || || |||||||| || || | |||||||||||||| ||||||||||||||||| || Sbjct: 149 gatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagttctaccacggtcgt 208 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || || | ||||||||||| || |||||| |||| || || || |||| ||| || Sbjct: 209 actggtcgtatctggaacgtcactaaacgcgccgtcggtgttgaagtcgacaaacagatt 268 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||||| || || Sbjct: 269 ggcaacaggatcataaggaagaggattcatgtgcgtgtggagcatgtgcagcagtcaaga 328 Query: 258 tgtgctgaggagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaagccaag 317 |||||||||||||| |||||||| ||||||||| |||||||||| | |||||| Sbjct: 329 tgtgctgaggagttcaagctgaggaagaagaagaatgatgagctcaaggctgcagccaaa 388 Query: 318 gcacgtggtgaggtcatcancaccaaga 345 || ||||||| ||||| |||||||| Sbjct: 389 gccaatggtgagaccatcagcaccaaga 416
>ref|NM_100831.2| Arabidopsis thaliana structural constituent of ribosome AT1G09590 mRNA, complete cds Length = 675 Score = 141 bits (71), Expect = 2e-30 Identities = 208/254 (81%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||||||||| || || | || |||||| | |||| |||||||||||| |||||| Sbjct: 75 aagaagggttacattcctctatcgacttacctgaggaccttcaaggtcggcgattacgtc 134 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || || |||||||| || || | |||||||||||||| |||||||||||||| || || Sbjct: 135 gatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagttctaccatggtcgt 194 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || || | ||||||||||||||||||||| |||| || || ||||||| ||| || Sbjct: 195 actggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaagtcaacaaacagatt 254 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||||| || || Sbjct: 255 gggaacaggatcataaggaagaggattcatgttcgtgtggagcatgtgcagcagtcaaga 314 Query: 258 tgtgctgaggagtt 271 ||||| |||||||| Sbjct: 315 tgtgccgaggagtt 328
>gb|BT000775.1| Arabidopsis thaliana clone RAFL04-10-C15 (R11681) putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 672 Score = 141 bits (71), Expect = 2e-30 Identities = 208/254 (81%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||||||||| || || | || |||||| | |||| |||||||||||| |||||| Sbjct: 75 aagaagggttacattcctctatcgacttacctgaggaccttcaaggtcggcgattacgtc 134 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || || |||||||| || || | |||||||||||||| |||||||||||||| || || Sbjct: 135 gatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagttctaccatggtcgt 194 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || || | ||||||||||||||||||||| |||| || || ||||||| ||| || Sbjct: 195 actggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaagtcaacaaacagatt 254 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||||| || || Sbjct: 255 gggaacaggatcataaggaagaggattcatgttcgtgtggagcatgtgcagcagtcaaga 314 Query: 258 tgtgctgaggagtt 271 ||||| |||||||| Sbjct: 315 tgtgccgaggagtt 328
>gb|AY059119.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 526 Score = 141 bits (71), Expect = 2e-30 Identities = 208/254 (81%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||||||||| || || | || |||||| | |||| |||||||||||| |||||| Sbjct: 61 aagaagggttacattcctctatcgacttacctgaggaccttcaaggtcggcgattacgtc 120 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || || |||||||| || || | |||||||||||||| |||||||||||||| || || Sbjct: 121 gatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagttctaccatggtcgt 180 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || || | ||||||||||||||||||||| |||| || || ||||||| ||| || Sbjct: 181 actggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaagtcaacaaacagatt 240 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||||| || || Sbjct: 241 gggaacaggatcataaggaagaggattcatgttcgtgtggagcatgtgcagcagtcaaga 300 Query: 258 tgtgctgaggagtt 271 ||||| |||||||| Sbjct: 301 tgtgccgaggagtt 314
>gb|AF370227.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 674 Score = 141 bits (71), Expect = 2e-30 Identities = 208/254 (81%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||||||||| || || | || |||||| | |||| |||||||||||| |||||| Sbjct: 75 aagaagggttacattcctctatcgacttacctgaggaccttcaaggtcggcgattacgtc 134 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || || |||||||| || || | |||||||||||||| |||||||||||||| || || Sbjct: 135 gatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagttctaccatggtcgt 194 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || || | ||||||||||||||||||||| |||| || || ||||||| ||| || Sbjct: 195 actggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaagtcaacaaacagatt 254 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||||| || || Sbjct: 255 gggaacaggatcataaggaagaggattcatgttcgtgtggagcatgtgcagcagtcaaga 314 Query: 258 tgtgctgaggagtt 271 ||||| |||||||| Sbjct: 315 tgtgccgaggagtt 328
>emb|BX816463.1|CNS0AANS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 569 Score = 141 bits (71), Expect = 2e-30 Identities = 208/254 (81%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||||||||| || || | || |||||| | |||| |||||||||||| |||||| Sbjct: 43 aagaagggttacattcctctatcgacttacctgaggaccttcaaggtcggcgattacgtc 102 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || || |||||||| || || | |||||||||||||| |||||||||||||| || || Sbjct: 103 gatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagttctaccatggtcgt 162 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || || | ||||||||||||||||||||| |||| || || ||||||| ||| || Sbjct: 163 actggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaagtcaacaaacagatt 222 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||||| || || Sbjct: 223 gggaacaggatcataaggaagaggattcatgttcgtgtggagcatgtgcagcagtcaaga 282 Query: 258 tgtgctgaggagtt 271 ||||| |||||||| Sbjct: 283 tgtgccgaggagtt 296
>ref|NM_104563.3| Arabidopsis thaliana structural constituent of ribosome AT1G57660 mRNA, complete cds Length = 715 Score = 117 bits (59), Expect = 2e-23 Identities = 205/254 (80%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 ||||||||||| || || ||| |||| ||||| | |||| |||||||||||| |||||| Sbjct: 108 aagaagggttatattccactctccacttacctcagaaccttcaaggtcggcgattacgtc 167 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || |||||||| || || || | |||||||||||||| || ||||||||||| || || Sbjct: 168 gatgtcaaggttaatggagctatccacaagggtatgcctcataagttctaccatggtcgt 227 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || ||| | ||||| ||||| ||||| ||| | || || || ||||||| ||| || Sbjct: 228 actggtcgcatctggaatgtcactaagcgtgccgttggtgttgaagtcaacaaacagatt 287 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||| | || ||| Sbjct: 288 gggaacagaatcataaggaagaggatacatgtgcgtgtggagcatgtgcaacagtcaagg 347 Query: 258 tgtgctgaggagtt 271 |||||||||||||| Sbjct: 348 tgtgctgaggagtt 361
>gb|AY091167.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g57660) mRNA, complete cds Length = 526 Score = 117 bits (59), Expect = 2e-23 Identities = 205/254 (80%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 ||||||||||| || || ||| |||| ||||| | |||| |||||||||||| |||||| Sbjct: 61 aagaagggttatattccactctccacttacctcagaaccttcaaggtcggcgattacgtc 120 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || |||||||| || || || | |||||||||||||| || ||||||||||| || || Sbjct: 121 gatgtcaaggttaatggagctatccacaagggtatgcctcataagttctaccatggtcgt 180 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || ||| | ||||| ||||| ||||| ||| | || || || ||||||| ||| || Sbjct: 181 actggtcgcatctggaatgtcactaagcgtgccgttggtgttgaagtcaacaaacagatt 240 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||| | || ||| Sbjct: 241 gggaacagaatcataaggaagaggatacatgtgcgtgtggagcatgtgcaacagtcaagg 300 Query: 258 tgtgctgaggagtt 271 |||||||||||||| Sbjct: 301 tgtgctgaggagtt 314
>gb|AY050840.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g57660) mRNA, complete cds Length = 681 Score = 117 bits (59), Expect = 2e-23 Identities = 205/254 (80%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 ||||||||||| || || ||| |||| ||||| | |||| |||||||||||| |||||| Sbjct: 108 aagaagggttatattccactctccacttacctcagaaccttcaaggtcggcgattacgtc 167 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || |||||||| || || || | |||||||||||||| || ||||||||||| || || Sbjct: 168 gatgtcaaggttaatggagctatccacaagggtatgcctcataagttctaccatggtcgt 227 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || ||| | ||||| ||||| ||||| ||| | || || || ||||||| ||| || Sbjct: 228 actggtcgcatctggaatgtcactaagcgtgccgttggtgttgaagtcaacaaacagatt 287 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||| | || ||| Sbjct: 288 gggaacagaatcataaggaagaggatacatgtgcgtgtggagcatgtgcaacagtcaagg 347 Query: 258 tgtgctgaggagtt 271 |||||||||||||| Sbjct: 348 tgtgctgaggagtt 361
>gb|AY086851.1| Arabidopsis thaliana clone 28545 mRNA, complete sequence Length = 627 Score = 117 bits (59), Expect = 2e-23 Identities = 205/254 (80%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 ||||||||||| || || ||| |||| ||||| | |||| |||||||||||| |||||| Sbjct: 105 aagaagggttatattccactctccacttacctcagaaccttcaaggtcggcgattacgtc 164 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || |||||||| || || || | |||||||||||||| || ||||||||||| || || Sbjct: 165 gatgtcaaggttaatggagctatccacaagggtatgcctcataagttctaccatggtcgt 224 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || ||| | ||||| ||||| ||||| ||| | || || || ||||||| ||| || Sbjct: 225 actggtcgcatctggaatgtcactaagcgtgccgttggtgttgaagtcaacaaacagatt 284 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||| | || ||| Sbjct: 285 gggaacagaatcataaggaagaggatacatgtgcgtgtggagcatgtgcaacagtcaagg 344 Query: 258 tgtgctgaggagtt 271 |||||||||||||| Sbjct: 345 tgtgctgaggagtt 358
>ref|NM_104579.3| Arabidopsis thaliana structural constituent of ribosome AT1G57860 mRNA, complete cds Length = 669 Score = 109 bits (55), Expect = 6e-21 Identities = 204/254 (80%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 ||||||||||| || || ||| |||| ||||| | |||| |||||||||||| |||||| Sbjct: 99 aagaagggttatattccactctccacttacctcagaaccttcaaggtcggcgattacgtc 158 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || |||||||| || || || | |||||||||||||| || ||||||||||| || || Sbjct: 159 gatgtcaaggttaatggagctatccacaagggtatgcctcataagttctaccatggtcgt 218 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || ||| | ||||| ||||| || || ||| | || || || ||||||| ||| || Sbjct: 219 actggtcgcatctggaatgtcactaaacgtgccgttggtgttgaagtcaacaaacagatt 278 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||| | || ||| Sbjct: 279 gggaacagaatcataaggaagaggatacatgtgcgtgtggagcatgtgcaacagtcaagg 338 Query: 258 tgtgctgaggagtt 271 |||||||||||||| Sbjct: 339 tgtgctgaggagtt 352
>gb|BT004794.1| Arabidopsis thaliana At1g57860 gene, complete cds Length = 495 Score = 109 bits (55), Expect = 6e-21 Identities = 204/254 (80%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 ||||||||||| || || ||| |||| ||||| | |||| |||||||||||| |||||| Sbjct: 61 aagaagggttatattccactctccacttacctcagaaccttcaaggtcggcgattacgtc 120 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || |||||||| || || || | |||||||||||||| || ||||||||||| || || Sbjct: 121 gatgtcaaggttaatggagctatccacaagggtatgcctcataagttctaccatggtcgt 180 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || ||| | ||||| ||||| || || ||| | || || || ||||||| ||| || Sbjct: 181 actggtcgcatctggaatgtcactaaacgtgccgttggtgttgaagtcaacaaacagatt 240 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| ||||||||||| | || ||| Sbjct: 241 gggaacagaatcataaggaagaggatacatgtgcgtgtggagcatgtgcaacagtcaagg 300 Query: 258 tgtgctgaggagtt 271 |||||||||||||| Sbjct: 301 tgtgctgaggagtt 314
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 103 bits (52), Expect = 4e-19 Identities = 147/179 (82%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||||||||| || || | || |||||| | |||| |||||||||||| |||||| Sbjct: 88212 aagaagggttacattcctctatcgacttacctgaggaccttcaaggtcggcgattacgtc 88271 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || || |||||||| || || | |||||||||||||| |||||||||||||| || || Sbjct: 88272 gatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagttctaccatggtcgt 88331 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggt 196 || || || | ||||||||||||||||||||| |||| || || ||||||| ||||| Sbjct: 88332 actggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaagtcaacaaacaggt 88390 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 54 acctacaaggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatg 113 |||| |||||||||||| |||||||| |||||||| || || || | ||||||||||| Sbjct: 44803 accttcaaggtcggcgattacgtcgatgtcaaggttaatggagctattcacaagggtatt 44744 Query: 114 ccgcacaagttctacca 130 || || ||||||||||| Sbjct: 44743 cctcataagttctacca 44727 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccaggtgtgctgag 266 ||||| ||||| ||||| ||||| ||||| ||||||||||||| || || ||||| ||| Sbjct: 88964 atcataaggaagaggattcatgttcgtgtggagcatgtgcagcagtcaagatgtgccgag 89023 Query: 267 gagtt 271 ||||| Sbjct: 89024 gagtt 89028 Score = 46.1 bits (23), Expect = 0.074 Identities = 50/59 (84%) Strand = Plus / Minus Query: 213 aggaaaaggatccatgtccgtgttgagcatgtgcagccatccaggtgtgctgaggagtt 271 ||||| ||||| ||||| ||||| ||||||||||| | || ||||||| ||||||||| Sbjct: 44333 aggaagaggatacatgtacgtgtggagcatgtgcaacagtcaaggtgtgatgaggagtt 44275
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 103 bits (52), Expect = 4e-19 Identities = 147/179 (82%) Strand = Plus / Minus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 |||||||||||||| || ||| | || |||||| | |||| |||||||||||| |||||| Sbjct: 24256 aagaagggttacattccactctcgacttacctgagaaccttcaaggtcggcgattacgtc 24197 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || || |||||||| || || | |||||||||||||| ||||||||||||||||| || Sbjct: 24196 gatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagttctaccacggtcgt 24137 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggt 196 || || || | ||||||||||| || |||||| |||| || || ||||||| ||||| Sbjct: 24136 actggtcgtatctggaacgtcactaaacgcgccgtcggtgttgaagtcaacaaacaggt 24078 Score = 73.8 bits (37), Expect = 3e-10 Identities = 113/139 (81%) Strand = Plus / Minus Query: 207 atcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccaggtgtgctgag 266 ||||| ||||| ||||| ||||| ||||| ||||||||||||| ||| || ||||||||| Sbjct: 23538 atcataaggaagaggattcatgtgcgtgtggagcatgtgcagcaatcaagatgtgctgag 23479 Query: 267 gagttncgcctgaggaaagtgaagaatgaccagctcaaggcggaagccaaggcacgtggt 326 ||||| |||||||| ||||||||| |||||||||| | |||||| || |||| Sbjct: 23478 gagttcaagctgaggaagaagaagaatgatgagctcaaggctgcagccaaagccaatggt 23419 Query: 327 gaggtcatcancaccaaga 345 ||| ||||| |||||||| Sbjct: 23418 gagaccatcagcaccaaga 23400
>emb|BX814226.1|CNS0AC0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 674 Score = 101 bits (51), Expect = 1e-18 Identities = 203/254 (79%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 ||||||||||| || || || |||| ||||| | |||| |||||||||||| |||||| Sbjct: 67 aagaagggttatattccaatctccacttacctcagaaccttcaaggtcggcgattacgtc 126 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggccgc 137 || |||||||| || || || | |||||||||||||| || ||||||||||| || || Sbjct: 127 gatgtcaaggttaatggagctatccacaagggtatgcctcataagttctaccatggtcgt 186 Query: 138 accggacgcgtgtggaacgtcaccaagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || ||| | ||||| ||||| ||||| ||| | || || || ||||||| ||| || Sbjct: 187 actggtcgcatctggaatgtcactaagcgtgccgttggtgttgaagtcaacaaacagatt 246 Query: 198 ggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccagg 257 || ||| | ||||| ||||| ||||| ||||| ||||| |||||||||| | || ||| Sbjct: 247 gggaacagaatcataaggaagaggatacatgtgcgtgtggagcatgtgccacagtcaagg 306 Query: 258 tgtgctgaggagtt 271 |||||||||||||| Sbjct: 307 tgtgctgaggagtt 320
>gb|AF092950.1|AF092950 Cyanophora paradoxa ribosomal protein L21E (rpl21) mRNA, complete cds Length = 486 Score = 87.7 bits (44), Expect = 2e-14 Identities = 97/115 (84%) Strand = Plus / Plus Query: 99 gtgcacaagggtatgccgcacaagttctaccacggccgcaccggacgcgtgtggaacgtc 158 ||||||||||| ||||| ||||| ||||||||||||||| || ||| |||||||| Sbjct: 142 gtgcacaagggcatgcccttcaagtactaccacggccgcactggcatcgtctggaacgtg 201 Query: 159 accaagcgcgccatcggcgtngagatcaacaagcaggttggaaaccgcatcatca 213 ||||||||||||||||| || ||||||||||||| ||| | |||||||||||| Sbjct: 202 accaagcgcgccatcggtgtggagatcaacaagcgggtccgccaccgcatcatca 256
>emb|AJ131099.1|PAB131099 Picea abies microsatellite RNA, clone PAAG5, 5' end Length = 1129 Score = 79.8 bits (40), Expect = 5e-12 Identities = 135/167 (80%) Strand = Plus / Plus Query: 102 cacaagggtatgccgcacaagttctaccacggccgcaccggacgcgtgtggaacgtcacc 161 |||||||||||||| |||||||||||||| || |||||||| || ||||| |||||| Sbjct: 187 cacaagggtatgcctcacaagttctaccatggtcgcaccggtgttgtctggaatgtcacc 246 Query: 162 aagcgcgccatcggcgtngagatcaacaagcaggttggaaaccgcatcatcaggaaaagg 221 ||||| || |||||||| || || ||||| |||||| | ||| || |||| ||| || Sbjct: 247 aagcgagcaatcggcgtcgaaatgaacaaacaggttcgtaacaagattatcaagaagaga 306 Query: 222 atccatgtccgtgttgagcatgtgcagccatccaggtgtgctgagga 268 || ||||| || ||||||||||||| || || |||||||| ||||| Sbjct: 307 attcatgtacgaattgagcatgtgcaaccgtctaggtgtgcagagga 353
>gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 genomic sequence, complete sequence Length = 90448 Score = 73.8 bits (37), Expect = 3e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 ||||||||||| || || ||| |||| ||||| | |||| |||||||||||| |||||| Sbjct: 46270 aagaagggttatattccactctccacttacctcagaaccttcaaggtcggcgattacgtc 46329 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctacca 130 || |||||||| || || || | |||||||||||||| || ||||||||||| Sbjct: 46330 gatgtcaaggttaatggagctatccacaagggtatgcctcataagttctacca 46382 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccaggtgtgctgag 266 ||||| ||||| ||||| ||||| ||||| ||||||||||| | || |||||||||||| Sbjct: 46762 atcataaggaagaggatacatgtgcgtgtggagcatgtgcaacagtcaaggtgtgctgag 46821 Query: 267 gagtt 271 ||||| Sbjct: 46822 gagtt 46826
>gb|AC079732.4|AC079732 Arabidopsis thaliana chromosome 1 BAC F12K22 genomic sequence, complete sequence Length = 43985 Score = 73.8 bits (37), Expect = 3e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 18 aagaagggttacatcccgctcaccacctacctgcgcacctacaaggtcggcgagtacgtc 77 ||||||||||| || || ||| |||| ||||| | |||| |||||||||||| |||||| Sbjct: 5594 aagaagggttatattccactctccacttacctcagaaccttcaaggtcggcgattacgtc 5653 Query: 78 gacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctacca 130 || |||||||| || || || | |||||||||||||| || ||||||||||| Sbjct: 5654 gatgtcaaggttaatggagctatccacaagggtatgcctcataagttctacca 5706 Score = 58.0 bits (29), Expect = 2e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccaggtgtgctgag 266 ||||| ||||| ||||| ||||| ||||| ||||||||||| | || |||||||||||| Sbjct: 6082 atcataaggaagaggatacatgtgcgtgtggagcatgtgcaacagtcaaggtgtgctgag 6141 Query: 267 gagtt 271 ||||| Sbjct: 6142 gagtt 6146
>emb|BX841874.1|CNS09Y44 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 60.0 bits (30), Expect = 5e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 54 acctacaaggtcggcgagtacgtcgacgtcaaggtgaacgg-cgccgtgcacaagggtat 112 |||| |||||||||||| |||||||| |||||||| || || ||| | ||||||||||| Sbjct: 132 accttcaaggtcggcgattacgtcgatgtcaaggttaatggacgctatccacaagggtat 191 Query: 113 gccgcacaagttctacca 130 ||| || ||||||||||| Sbjct: 192 gcctcataagttctacca 209 Score = 48.1 bits (24), Expect = 0.019 Identities = 54/64 (84%) Strand = Plus / Plus Query: 184 tcaacaagcaggttggaaaccgcatcatcaggaaaaggatccatgtccgtgttgagcatg 243 ||||||| ||| |||| ||| | ||||| ||||| ||||| ||||| ||||| ||||||| Sbjct: 266 tcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtcgagcatg 325 Query: 244 tgca 247 |||| Sbjct: 326 tgca 329
>ref|XM_505036.1| Yarrowia lipolytica CLIB122, YALI0F05522g predicted mRNA Length = 486 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 105 aagggtatgccgcacaagttctaccacggccg 136 ||||||||||| |||||||||||||||||||| Sbjct: 148 aagggtatgccccacaagttctaccacggccg 179
>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence Length = 38975 Score = 56.0 bits (28), Expect = 8e-05 Identities = 39/43 (90%) Strand = Plus / Plus Query: 150 tggaacgtcaccaagcgcgccatcggcgtngagatcaacaagc 192 ||||||||||| |||||||||||||| || ||||| ||||||| Sbjct: 5000 tggaacgtcactaagcgcgccatcggtgtggagataaacaagc 5042
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 56.0 bits (28), Expect = 8e-05 Identities = 31/32 (96%) Strand = Plus / Minus Query: 105 aagggtatgccgcacaagttctaccacggccg 136 ||||||||||| |||||||||||||||||||| Sbjct: 825811 aagggtatgccccacaagttctaccacggccg 825780
>gb|DQ066307.1| Ixodes scapularis isolate IS-6-12L-52 ribosomal protein L21 mRNA, complete cds Length = 486 Score = 54.0 bits (27), Expect = 3e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 72 tacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccac 131 ||||| ||||| |||| ||||| ||| | || ||||||||||||||||| ||||||||| Sbjct: 115 tacgttgacgttaagggcaacggagccttccaaaagggtatgccgcacaaattctaccac 174 Query: 132 ggc 134 ||| Sbjct: 175 ggc 177
>ref|XM_959139.1| Neurospora crassa OR74A hypothetical protein (NCU01948.1) partial mRNA Length = 483 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 57 tacaaggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccg 116 |||||||| ||||| ||||||| ||||||| ||||| || || || ||||||||| | Sbjct: 100 tacaaggttggcgacatcgtcgacatcaaggtcaacggtgctgtccagaagggtatggcc 159 Query: 117 cacaagttctaccacggc 134 |||||| ||||||||||| Sbjct: 160 cacaaggtctaccacggc 177
>ref|XM_329137.1| Neurospora crassa OR74A hypothetical protein (NCU01948.1) partial mRNA Length = 483 Score = 52.0 bits (26), Expect = 0.001 Identities = 65/78 (83%) Strand = Plus / Plus Query: 57 tacaaggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccg 116 |||||||| ||||| ||||||| ||||||| ||||| || || || ||||||||| | Sbjct: 100 tacaaggttggcgacatcgtcgacatcaaggtcaacggtgctgtccagaagggtatggcc 159 Query: 117 cacaagttctaccacggc 134 |||||| ||||||||||| Sbjct: 160 cacaaggtctaccacggc 177
>ref|XM_753406.1| Ustilago maydis 521 hypothetical protein (UM02352.1) partial mRNA Length = 516 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 75 gtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacggc 134 |||||| |||||| |||| |||| ||| ||||||||||| ||||||| |||||||||| Sbjct: 151 gtcgacatcaaggccaacgctgccgagcaaaagggtatgccccacaagtactaccacggc 210 Query: 135 cg 136 || Sbjct: 211 cg 212
>ref|XM_570887.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein l21-a (CNE02170) partial mRNA Length = 559 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 105 aagggtatgccgcacaagttctaccacggc 134 ||||||||||| |||||||||||||||||| Sbjct: 162 aagggtatgccccacaagttctaccacggc 191
>gb|AY292616.1| Oikopleura dioica 60S ribosomal protein L21 (RL21) gene, complete cds Length = 578 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 105 aagggtatgccgcacaagttctaccacgg 133 |||||||||||||||||| |||||||||| Sbjct: 201 aagggtatgccgcacaaggtctaccacgg 229
>ref|XM_455019.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23727g predicted mRNA Length = 483 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 102 cacaagggtatgccgcacaagttctacca 130 |||||||||||||| |||||||||||||| Sbjct: 145 cacaagggtatgccacacaagttctacca 173
>gb|DQ191668.1| Solanum tuberosum 60S ribosomal protein L21-like protein mRNA, complete cds Length = 751 Score = 50.1 bits (25), Expect = 0.005 Identities = 78/96 (81%) Strand = Plus / Plus Query: 102 cacaagggtatgccgcacaagttctaccacggccgcaccggacgcgtgtggaacgtcacc 161 |||||||| ||||| |||||||||||||| || || || || || || ||||| || ||| Sbjct: 204 cacaagggaatgcctcacaagttctaccatggacgtactggtcgtgtttggaatgttacc 263 Query: 162 aagcgcgccatcggcgtngagatcaacaagcaggtt 197 || |||||| | || || || |||||||||||||| Sbjct: 264 aaacgcgccgttggtgttgaagtcaacaagcaggtt 299
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Minus Query: 102 cacaagggtatgccgcacaagttctacca 130 |||||||||||||| |||||||||||||| Sbjct: 2101980 cacaagggtatgccacacaagttctacca 2101952
>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17 Length = 109016 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Minus Query: 207 atcatcaggaaaaggatccatgtccgtgttgagcatgtgcagccatccaggtgtgctgag 266 ||||| ||||| ||||||||||| | ||| ||||||||||||| || || ||||||| | Sbjct: 13503 atcataaggaagaggatccatgttcttgtggagcatgtgcagcagtcaagatgtgctgtg 13444 Query: 267 gagtt 271 ||||| Sbjct: 13443 gagtt 13439
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 102 cacaagggtatgccgcacaagttctacca 130 |||||||||||||| |||||||||||||| Sbjct: 163874 cacaagggtatgccacacaagttctacca 163902
>gb|AC007654.2|AC007654 Genomic sequence for Arabidopsis thaliana BAC T19E23 from chromosome I, complete sequence Length = 87618 Score = 50.1 bits (25), Expect = 0.005 Identities = 64/77 (83%) Strand = Plus / Plus Query: 54 acctacaaggtcggcgagtacgtcgacgtcaaggtgaacggcgccgtgcacaagggtatg 113 |||| |||||||||||| |||||| | |||||||| || || || | ||||||||||| Sbjct: 69561 accttcaaggtcggcgattacgtcaatgtcaaggttaatggagctattcacaagggtatt 69620 Query: 114 ccgcacaagttctacca 130 || || ||||||||||| Sbjct: 69621 cctcataagttctacca 69637 Score = 46.1 bits (23), Expect = 0.074 Identities = 50/59 (84%) Strand = Plus / Plus Query: 213 aggaaaaggatccatgtccgtgttgagcatgtgcagccatccaggtgtgctgaggagtt 271 ||||| ||||| ||||| ||||| ||||||||||| | || ||||||| ||||||||| Sbjct: 70033 aggaagaggatacatgtacgtgtggagcatgtgcaacagtcaaggtgtgatgaggagtt 70091
>ref|NM_209960.1| Eremothecium gossypii AEL254Wp (AEL254W), mRNA Length = 483 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 102 cacaagggtatgccgcacaagttctacca 130 |||||||||||||| |||||||||||||| Sbjct: 145 cacaagggtatgccacacaagttctacca 173
>ref|XM_799307.1| Trypanosoma cruzi strain CL Brener ribosomal protein L21E (60S) (Tc00.1047053507251.20) partial mRNA Length = 480 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 108 ggtatgccgcacaagttctaccacggccgcac 139 |||||||| ||||||| ||||||||||||||| Sbjct: 151 ggtatgccacacaagtactaccacggccgcac 182
>ref|XM_807657.1| Trypanosoma cruzi strain CL Brener ribosomal protein L21E (60S) (Tc00.1047053506405.149) partial mRNA Length = 480 Score = 48.1 bits (24), Expect = 0.019 Identities = 30/32 (93%) Strand = Plus / Plus Query: 108 ggtatgccgcacaagttctaccacggccgcac 139 |||||||| ||||||| ||||||||||||||| Sbjct: 151 ggtatgccacacaagtactaccacggccgcac 182
>ref|XM_774277.1| Giardia lamblia ATCC 50803 ribosomal protein rpl21 (GLP_165_41283_41762) partial mRNA Length = 480 Score = 46.1 bits (23), Expect = 0.074 Identities = 35/39 (89%) Strand = Plus / Plus Query: 56 ctacaaggtcggcgagtacgtcgacgtcaaggtgaacgg 94 ||||||| ||||| |||||||| || ||||||||||||| Sbjct: 99 ctacaagctcggccagtacgtcaacatcaaggtgaacgg 137
>ref|XM_449631.1| Candida glabrata CBS138 hypothetical protein (CAGL0M06523g) partial mRNA Length = 483 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 aagggtatgccgcacaagttctacca 130 ||||||||||| |||||||||||||| Sbjct: 148 aagggtatgccacacaagttctacca 173
>gb|AC121238.17| Medicago truncatula clone mth2-34p9, complete sequence Length = 104878 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 104 caagggtatgccgcacaagttctacc 129 |||||||||||| ||||||||||||| Sbjct: 83505 caagggtatgcctcacaagttctacc 83530
>emb|CR380959.1| Candida glabrata strain CBS138 chromosome M complete sequence Length = 1400893 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 aagggtatgccgcacaagttctacca 130 ||||||||||| |||||||||||||| Sbjct: 676144 aagggtatgccacacaagttctacca 676169
>gb|DQ333017.1| Synthetic construct Saccharomyces cerevisiae clone FLH006698.01X RPL21B gene, complete sequence Length = 904 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 aagggtatgccgcacaagttctacca 130 ||||||||||| |||||||||||||| Sbjct: 569 aagggtatgccacacaagttctacca 594
>gb|U41849.1|SCU41849 Saccharomyces cerevisiae chromosome XVI, left arm, cosmid 8204 Length = 35868 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 105 aagggtatgccgcacaagttctacca 130 ||||||||||| |||||||||||||| Sbjct: 20188 aagggtatgccacacaagttctacca 20213
>ref|XM_636632.1| Dictyostelium discoideum 60S ribosomal protein L21 (DDB0229962), partial mRNA Length = 483 Score = 42.1 bits (21), Expect = 1.2 Identities = 36/41 (87%) Strand = Plus / Plus Query: 102 cacaagggtatgccgcacaagttctaccacggccgcaccgg 142 ||||| |||||||| ||||| ||||||||||| || ||||| Sbjct: 145 cacaaaggtatgccacacaaattctaccacggtcgtaccgg 185
>gb|DQ207854.1| Solanum tuberosum clone 076C12 unknown mRNA Length = 725 Score = 42.1 bits (21), Expect = 1.2 Identities = 77/96 (80%) Strand = Plus / Plus Query: 102 cacaagggtatgccgcacaagttctaccacggccgcaccggacgcgtgtggaacgtcacc 161 |||||||| ||||| |||||||||||||| || || || || || || ||||| || ||| Sbjct: 171 cacaagggaatgcctcacaagttctaccatggacgtactggtcgtgtttggaatgttacc 230 Query: 162 aagcgcgccatcggcgtngagatcaacaagcaggtt 197 || || ||| | || || || |||||||||||||| Sbjct: 231 aaacgtgccgttggtgttgaagtcaacaagcaggtt 266
>gb|AY618092.1| Sterkiella histriomuscorum clone UGC1O0004_K15_R genomic sequence Length = 742 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 102 cacaagggtatgccgcacaagttctacca 130 |||||||||||||| ||||| |||||||| Sbjct: 262 cacaagggtatgccacacaaattctacca 290
>emb|AL008630.1|HS282F2 Human DNA sequence from clone CTA-282F2 on chromosome 22, complete sequence Length = 60579 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 210 atcaggaaaaggatccatgtc 230 ||||||||||||||||||||| Sbjct: 45530 atcaggaaaaggatccatgtc 45550
>emb|BX072250.1|CNS09RWU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAD1AD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 683 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 218 acggtgccgtgcacaagggtatgcc 242
>emb|BX066618.1|CNS09NKE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC50AA03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 686 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 415 acggtgccgtgcacaagggtatgcc 391
>emb|BX055386.1|CNS09EWE Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC34AA01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 790 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 174 acggtgccgtgcacaagggtatgcc 198
>emb|BX051028.1|CNS09BJC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC28AA05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 471 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 182 acggtgccgtgcacaagggtatgcc 206
>emb|BX049569.1|CNS09AET Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC25CD01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 325 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 216 acggtgccgtgcacaagggtatgcc 240
>emb|BX047565.1|CNS098V5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC22AC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 737 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 134 acggtgccgtgcacaagggtatgcc 158
>emb|BX038998.1|CNS09296 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB3CF01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 591 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 575 acggtgccgtgcacaagggtatgcc 551
>emb|BX038997.1|CNS09295 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3CF01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 592 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 214 acggtgccgtgcacaagggtatgcc 238
>emb|BX038604.1|CNS091Y8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3AC11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 619 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 190 acggtgccgtgcacaagggtatgcc 214
>emb|BX038486.1|CNS091UY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB2DF08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 605 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 191 acggtgccgtgcacaagggtatgcc 215
>emb|BX038410.1|CNS091SU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB2DC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 654 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 582 acggtgccgtgcacaagggtatgcc 558
>emb|BX038409.1|CNS091ST Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB2DC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 723 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 225 acggtgccgtgcacaagggtatgcc 249
>emb|BX038404.1|CNS091SO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB2DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 672 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 584 acggtgccgtgcacaagggtatgcc 560
>emb|BX038403.1|CNS091SN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB2DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 722 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 221 acggtgccgtgcacaagggtatgcc 245
>emb|BX038349.1|CNS091R5 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB2CH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 693 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 580 acggtgccgtgcacaagggtatgcc 556
>emb|BX038348.1|CNS091R4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB2CH06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 741 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 240 acggtgccgtgcacaagggtatgcc 264
>emb|BX037985.1|CNS091H1 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB2AF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 671 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 584 acggtgccgtgcacaagggtatgcc 560
>emb|BX037984.1|CNS091H0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB2AF09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 766 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 221 acggtgccgtgcacaagggtatgcc 245
>emb|BX034995.1|CNS08Z5Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA6AE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 671 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 416 acggtgccgtgcacaagggtatgcc 392
>emb|BX034994.1|CNS08Z5Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA6AE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 817 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 215 acggtgccgtgcacaagggtatgcc 239
>emb|BX034575.1|CNS08YUB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA50CB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 782 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 182 acggtgccgtgcacaagggtatgcc 206
>emb|BX034293.1|CNS08YMH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA50AF02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 789 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 187 acggtgccgtgcacaagggtatgcc 211
>emb|BX034039.1|CNS08YFF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA5DB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 795 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 190 acggtgccgtgcacaagggtatgcc 214
>emb|BX031754.1|CNS08WNY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA47BC10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 815 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 197 acggtgccgtgcacaagggtatgcc 221
>emb|BX031276.1|CNS08WAO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA46CF06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 800 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 198 acggtgccgtgcacaagggtatgcc 222
>emb|BX028974.1|CNS08UIQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA43BC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 562 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 191 acggtgccgtgcacaagggtatgcc 215
>emb|BX028747.1|CNS08UCF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA42DG04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 815 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 202 acggtgccgtgcacaagggtatgcc 226
>emb|BX025908.1|CNS08S5K Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA39DF08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 763 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 157 acggtgccgtgcacaagggtatgcc 181
>emb|BX021458.1|CNS08OPY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA31DC06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 819 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 213 acggtgccgtgcacaagggtatgcc 237
>emb|BX019519.1|CNS08N83 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA29DB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 760 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 514 acggtgccgtgcacaagggtatgcc 490
>emb|BX019518.1|CNS08N82 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA29DB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 829 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 211 acggtgccgtgcacaagggtatgcc 235
>emb|BX017157.1|CNS08LEH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA25DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 575 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 416 acggtgccgtgcacaagggtatgcc 392
>emb|BX017156.1|CNS08LEG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA25DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 660 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 190 acggtgccgtgcacaagggtatgcc 214
>gb|AF526223.1| Argopecten irradians isolate iolsaicl245ct282cn301 ribosomal protein L21 mRNA, complete cds Length = 542 Score = 42.1 bits (21), Expect = 1.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 105 aagggtatgccgcacaagttctaccacgg 133 ||||||||||| |||||| |||||||||| Sbjct: 179 aagggtatgccccacaaggtctaccacgg 207
>emb|AJ507398.1|HSA507398 Homo sapiens RINZFC gene for putative RIN zinc finger protein, exons 1-6 Length = 39160 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 274 gcctgaggaaagtgaagaatg 294 ||||||||||||||||||||| Sbjct: 8840 gcctgaggaaagtgaagaatg 8860
>gb|AC009812.17| Homo sapiens chromosome 8, clone RP11-48B3, complete sequence Length = 155405 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 274 gcctgaggaaagtgaagaatg 294 ||||||||||||||||||||| Sbjct: 80815 gcctgaggaaagtgaagaatg 80795
>ref|XM_320389.2| Anopheles gambiae str. PEST ENSANGP00000014054 (ENSANGG00000011565), mRNA Length = 794 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 91 acggcgccgtgcacaagggtatgcc 115 |||| |||||||||||||||||||| Sbjct: 241 acggtgccgtgcacaagggtatgcc 265
>gb|BC088139.1| Rattus norvegicus GABA(A) receptor-associated protein like 2, mRNA (cDNA clone MGC:108686 IMAGE:7323806), complete cds Length = 1619 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 255 atcatcaggaaaaggatcca 274
>ref|XM_511114.1| PREDICTED: Pan troglodytes similar to GABA(A) receptor-associated protein like 2; ganglioside expression factor 2 (LOC454251), mRNA Length = 1093 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 910 atcatcaggaaaaggatcca 929
>ref|NM_190560.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 303 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 116 gcacaagttctaccacggccgcac 139 ||||||||||| |||||||||||| Sbjct: 46 gcacaagttctgccacggccgcac 69
>gb|AC118010.11| Mus musculus chromosome 5, clone RP23-451E8, complete sequence Length = 184672 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 46760 atcatcaggaaaaggatcca 46741
>gb|BC005985.1| Homo sapiens GABA(A) receptor-associated protein-like 2, mRNA (cDNA clone MGC:14752 IMAGE:4282114), complete cds Length = 973 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 264 atcatcaggaaaaggatcca 283
>ref|NM_026693.2| Mus musculus gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2 (Gabarapl2), mRNA Length = 2500 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 285 atcatcaggaaaaggatcca 304
>ref|XM_657314.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4802.2), mRNA Length = 477 Score = 40.1 bits (20), Expect = 4.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 82 tcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||||| ||||| ||||| || ||||||||||| ||||| ||||| |||| Sbjct: 125 tcaaggtcaacggtgccgttcagaagggtatgccctacaaggtctacaacgg 176
>gb|AY302590.1| Sclerotinia sclerotiorum ribosomal protein Srp1 (srp1) mRNA, complete cds Length = 653 Score = 40.1 bits (20), Expect = 4.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 90 aacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||| ||||| || ||||||||||| |||||| | |||||||| Sbjct: 165 aacggtgccgtccaaaagggtatgccccacaaggtttaccacgg 208
>gb|BC026798.1| Mus musculus gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2, mRNA (cDNA clone MGC:25802 IMAGE:4036425), complete cds Length = 976 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 263 atcatcaggaaaaggatcca 282
>gb|AY422180.1| Mus musculus GABA(A) receptor-associated protein-like 2 (Gabarapl2) pseudogene, complete sequence Length = 902 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 225 atcatcaggaaaaggatcca 244
>ref|XM_749817.1| Aspergillus fumigatus Af293 60s ribosomal protein l21 (Afu3g06960) partial mRNA Length = 477 Score = 40.1 bits (20), Expect = 4.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 82 tcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||||| ||||| ||||| || ||||||||||| ||||| ||||| |||| Sbjct: 125 tcaaggtcaacggtgccgttcagaagggtatgccctacaaggtctacaacgg 176
>ref|XM_389071.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08895.1) partial mRNA Length = 483 Score = 40.1 bits (20), Expect = 4.6 Identities = 50/60 (83%) Strand = Plus / Plus Query: 74 cgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||||| | |||| |||||| ||||| || ||||||||||| |||| |||||||||| Sbjct: 117 cgtcgacattaaggcgaacggtgccgtccagaagggtatgcccttcaaggtctaccacgg 176
>ref|XM_536778.2| PREDICTED: Canis familiaris similar to GABA(A) receptor-associated protein like 2 (LOC479646), mRNA Length = 1341 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 666 atcatcaggaaaaggatcca 685
>ref|NM_007285.6| Homo sapiens GABA(A) receptor-associated protein-like 2 (GABARAPL2), mRNA Length = 1031 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 323 atcatcaggaaaaggatcca 342
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 acgtcaccaagcgcgccatcggcg 177 |||||||||||||||||| ||||| Sbjct: 249864 acgtcaccaagcgcgccaacggcg 249841
>gb|BC029601.1| Homo sapiens GABA(A) receptor-associated protein-like 2, mRNA (cDNA clone MGC:39783 IMAGE:5296075), complete cds Length = 1007 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 313 atcatcaggaaaaggatcca 332
>gb|BC014594.2| Homo sapiens GABA(A) receptor-associated protein-like 2, mRNA (cDNA clone MGC:26328 IMAGE:4821535), complete cds Length = 976 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 282 atcatcaggaaaaggatcca 301
>gb|BC081436.1| Mus musculus gamma-aminobutyric acid (GABA-A) receptor-associated protein-like 2, mRNA (cDNA clone MGC:102013 IMAGE:6814986), complete cds Length = 651 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 288 atcatcaggaaaaggatcca 307
>emb|AJ010569.1|HSA010569 Homo sapiens mRNA for GEF-2 protein Length = 450 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 283 atcatcaggaaaaggatcca 302
>gb|AC092323.3| Homo sapiens chromosome 16 clone RP11-133B5, complete sequence Length = 173189 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 atcaggaaaaggatccatgt 229 |||||||||||||||||||| Sbjct: 168794 atcaggaaaaggatccatgt 168775
>gb|BC102902.1| Bos taurus GABA(A) receptor-associated protein-like 2, mRNA (cDNA clone IMAGE:7985087), partial cds Length = 981 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 287 atcatcaggaaaaggatcca 306
>emb|CR624907.1| full-length cDNA clone CS0DA011YJ15 of Neuroblastoma of Homo sapiens (human) Length = 990 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 311 atcatcaggaaaaggatcca 330
>emb|CR621062.1| full-length cDNA clone CS0DI066YH02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 975 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 301 atcatcaggaaaaggatcca 320
>emb|CR603478.1| full-length cDNA clone CS0DF013YB20 of Fetal brain of Homo sapiens (human) Length = 917 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 260 atcatcaggaaaaggatcca 279
>emb|CR592344.1| full-length cDNA clone CS0DI020YN18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 908 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 258 atcatcaggaaaaggatcca 277
>dbj|AB226224.1| Aspergillus oryzae cDNA, contig sequence: AoEST3083 Length = 981 Score = 40.1 bits (20), Expect = 4.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 82 tcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||||| ||||| ||||| || ||||||||||| ||||| ||||| |||| Sbjct: 196 tcaaggtcaacggtgccgttcagaagggtatgccctacaaggtctacaacgg 247
>dbj|AK134873.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430501B01 product:GABA(A) receptor-associated protein like 2, full insert sequence Length = 1678 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 304 atcatcaggaaaaggatcca 323
>gb|AC104260.5| Homo sapiens chromosome 15, clone CTD-2536I1, complete sequence Length = 191528 Score = 40.1 bits (20), Expect = 4.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 239 gcatgtgcagccatccaggtgtgc 262 |||||||||||||||||| ||||| Sbjct: 59743 gcatgtgcagccatccagctgtgc 59766
>gb|AC025287.8| Homo sapiens chromosome 16 clone RP11-490B18, complete sequence Length = 194832 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 149737 atcatcaggaaaaggatcca 149718
>emb|CR542217.1| Homo sapiens full open reading frame cDNA clone RZPDo834A0725D for gene GABARAPL2, GABA(A) receptor-associated protein-like 2; complete cds, incl. stopcodon Length = 354 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 187 atcatcaggaaaaggatcca 206
>gb|AC009109.9| Homo sapiens chromosome 16 clone RP11-467L24, complete sequence Length = 150086 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 atcaggaaaaggatccatgt 229 |||||||||||||||||||| Sbjct: 149376 atcaggaaaaggatccatgt 149395
>dbj|AK013563.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900019O08 product:similar to GANGLIOSIDE EXPRESSION FACTOR 2 (GEF-2) (GENERAL PROTEIN TRANSPORT FACTOR P16) (GATE-16) [Homo sapiens], full insert sequence Length = 977 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 301 atcatcaggaaaaggatcca 320
>dbj|AK049819.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630001N14 product:GABA(A) receptor-associated protein like 2, full insert sequence Length = 2500 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 285 atcatcaggaaaaggatcca 304
>dbj|AK002596.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610012F20 product:GABA(A) receptor-associated protein like 2, full insert sequence Length = 959 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 283 atcatcaggaaaaggatcca 302
>gb|AF190644.1|AF190644 Mus musculus GABA(A) receptor-associated protein-like 2 (Gabaralp2) mRNA, complete cds Length = 1012 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 302 atcatcaggaaaaggatcca 321
>gb|AF087848.1|AF087848 Homo sapiens GABA-A receptor-associated protein like 2 (GABARAPL2) mRNA, complete cds Length = 972 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 294 atcatcaggaaaaggatcca 313
>ref|NG_005250.1| Mus musculus GABA(A) receptor-associated protein-like 2 pseudogene 5_758.1 (Gabarapl2-ps5_758.1) on chromosome 5 Length = 902 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 225 atcatcaggaaaaggatcca 244
>emb|AL116566.1|CNS01DA6 Botrytis cinerea strain T4 cDNA library Length = 600 Score = 40.1 bits (20), Expect = 4.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 90 aacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||| ||||| || ||||||||||| |||||| | |||||||| Sbjct: 140 aacggtgccgttcaaaagggtatgccacacaaggtttaccacgg 183
>emb|AL116420.1|CNS01D64 Botrytis cinerea strain T4 cDNA library Length = 600 Score = 40.1 bits (20), Expect = 4.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 90 aacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||| ||||| || ||||||||||| |||||| | |||||||| Sbjct: 157 aacggtgccgttcaaaagggtatgccacacaaggtttaccacgg 200
>emb|AL115400.1|CNS01CDS Botrytis cinerea strain T4 cDNA library Length = 600 Score = 40.1 bits (20), Expect = 4.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 90 aacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||| ||||| || ||||||||||| |||||| | |||||||| Sbjct: 151 aacggtgccgttcaaaagggtatgccacacaaggtttaccacgg 194
>emb|AL115058.1|CNS01C4A Botrytis cinerea strain T4 cDNA library Length = 660 Score = 40.1 bits (20), Expect = 4.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 90 aacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||| ||||| || ||||||||||| |||||| | |||||||| Sbjct: 173 aacggtgccgttcaaaagggtatgccacacaaggtttaccacgg 216
>emb|AL113789.1|CNS01B51 Botrytis cinerea strain T4 cDNA library Length = 600 Score = 40.1 bits (20), Expect = 4.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 90 aacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||| ||||| || ||||||||||| |||||| | |||||||| Sbjct: 149 aacggtgccgttcaaaagggtatgccacacaaggtttaccacgg 192
>emb|AL112271.1|CNS019YV Botrytis cinerea strain T4 cDNA library Length = 600 Score = 40.1 bits (20), Expect = 4.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 90 aacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||| ||||| || ||||||||||| |||||| | |||||||| Sbjct: 150 aacggtgccgttcaaaagggtatgccacacaaggtttaccacgg 193
>gb|AC115914.6| Mus musculus chromosome 8, clone RP24-487J5, complete sequence Length = 163170 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 29565 atcatcaggaaaaggatcca 29546
>ref|NM_174675.2| Bos taurus GABA(A) receptor-associated protein-like 2 (GABARAPL2), mRNA Length = 950 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 266 atcatcaggaaaaggatcca 285
>ref|NM_022706.2| Rattus norvegicus GABA(A) receptor-associated protein like 2 (Gabarapl2), mRNA Length = 1619 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 255 atcatcaggaaaaggatcca 274
>ref|XM_345534.2| PREDICTED: Rattus norvegicus similar to GABA(A) receptor-associated protein like 2 (LOC366374), mRNA Length = 1146 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 979 atcatcaggaaaaggatcca 998
>gb|AY117145.1| Bovine viral diarrhea virus-1 isolate CP 721 polyprotein mRNA, partial cds Length = 1018 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 739 atcatcaggaaaaggatcca 758
>gb|AY117147.1| Bos taurus cell-line MDBK 16 kDa golgi-associated ATPase enhancer mRNA, complete cds Length = 514 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 226 atcatcaggaaaaggatcca 245
>gb|AF077046.1| Homo sapiens ganglioside expression factor 2 homolog mRNA, complete cds Length = 1003 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 296 atcatcaggaaaaggatcca 315
>gb|AF020262.1|AF020262 Bos taurus general protein transport factor p16 mRNA, complete cds Length = 950 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 266 atcatcaggaaaaggatcca 285
>dbj|AB003515.1| Rattus norvegicus mRNA for GEF-2, complete cds Length = 975 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 293 atcatcaggaaaaggatcca 312
>gb|AC124615.11| Mus musculus chromosome 5, clone RP24-445F15, complete sequence Length = 128560 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 107282 atcatcaggaaaaggatcca 107263
>gb|AY893581.1| Synthetic construct Homo sapiens clone FLH131145.01X GABA(A) receptor-associated protein-like 2 (GABARAPL2) mRNA, complete cds Length = 354 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 187 atcatcaggaaaaggatcca 206
>gb|AY893550.1| Synthetic construct Homo sapiens clone FLH131140.01X GABA(A) receptor-associated protein-like 2 (GABARAPL2) mRNA, complete cds Length = 354 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 187 atcatcaggaaaaggatcca 206
>dbj|AK104044.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F04, full insert sequence Length = 680 Score = 40.1 bits (20), Expect = 4.6 Identities = 50/60 (83%) Strand = Plus / Plus Query: 74 cgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||||| | |||| |||||| ||||| || ||||||||||| |||| |||||||||| Sbjct: 167 cgtcgacattaaggcgaacggtgccgtccagaagggtatgcccttcaaggtctaccacgg 226
>dbj|AK059120.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F02, full insert sequence Length = 680 Score = 40.1 bits (20), Expect = 4.6 Identities = 50/60 (83%) Strand = Plus / Plus Query: 74 cgtcgacgtcaaggtgaacggcgccgtgcacaagggtatgccgcacaagttctaccacgg 133 ||||||| | |||| |||||| ||||| || ||||||||||| |||| |||||||||| Sbjct: 167 cgtcgacattaaggcgaacggtgccgtccagaagggtatgcccttcaaggtctaccacgg 226
>gb|BT020958.1| Bos taurus GABA(A) receptor-associated protein-like 2 (GABARAPL2), mRNA, complete cds Length = 953 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 275 atcatcaggaaaaggatcca 294
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 caaggtcggcgagtacgtcg 78 |||||||||||||||||||| Sbjct: 2067343 caaggtcggcgagtacgtcg 2067324
>gb|BC058145.1| Rattus norvegicus GABA(A) receptor-associated protein like 2, mRNA (cDNA clone MGC:72812 IMAGE:6921109), complete cds Length = 627 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 258 atcatcaggaaaaggatcca 277
>dbj|AB030710.1| Homo sapiens FLC3A mRNA for MAP1 light chain 3 related protein, complete cds Length = 1031 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 atcatcaggaaaaggatcca 226 |||||||||||||||||||| Sbjct: 323 atcatcaggaaaaggatcca 342 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,782,888 Number of Sequences: 3902068 Number of extensions: 1782888 Number of successful extensions: 39045 Number of sequences better than 10.0: 165 Number of HSP's better than 10.0 without gapping: 165 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 38698 Number of HSP's gapped (non-prelim): 326 length of query: 345 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 323 effective length of database: 17,147,199,772 effective search space: 5538545526356 effective search space used: 5538545526356 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)