Clone Information

BLAST Search Result

Clone Name	baal30j17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ...	368	e-102
2	RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a...	328	8e-90
3	RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a...	304	1e-82
4	RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ...	293	2e-79
5	RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a...	281	1e-75
6	RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ...	279	3e-75
7	RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ...	279	3e-75
8	RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a...	275	6e-74
9	RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a...	273	3e-73
10	RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a...	272	5e-73
11	RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ...	271	7e-73
12	RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ...	270	2e-72
13	RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a...	270	3e-72
14	RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a...	266	2e-71
15	RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a...	265	9e-71
16	RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a...	200	2e-51
17	RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a...	122	7e-28
18	RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a...	122	9e-28
19	KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (A...	33	0.56
20	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	32	0.95
21	KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (A...	32	1.2
22	CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor...	32	1.2
23	PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4	32	1.2
24	G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (...	32	1.2
25	CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2...	32	1.2
26	CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor...	32	1.2
27	KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kina...	31	2.1
28	KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kina...	31	2.1
29	CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ...	31	2.1
30	PTR2_CANAL (P46030) Peptide transporter PTR2	31	2.1
31	PCRB_SULAC (Q4JAS3) Protein pcrB homolog	31	2.1
32	RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2...	31	2.8
33	VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants	31	2.8
34	ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl trans...	30	3.6
35	TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1...	30	3.6
36	CDCH_HALSA (Q9HPF0) Protein cdcH	30	3.6
37	ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl trans...	30	4.7
38	PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Prote...	30	4.7
39	PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC ...	30	4.7
40	COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph...	30	4.7
41	ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl trans...	30	4.7
42	ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl trans...	30	4.7
43	VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG)...	30	4.7
44	KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 ...	30	6.1
45	KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast pr...	30	6.1
46	DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)	30	6.1
47	OR65B_DROME (P82983) Putative odorant receptor 65b	29	8.0
48	SPAST_HUMAN (Q9UBP0) Spastin	29	8.0
49	RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107	29	8.0
50	SPAST_MOUSE (Q9QYY8) Spastin	29	8.0
51	PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor t...	29	8.0
52	UCK1_MOUSE (P52623) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK...	29	8.0
53	UCK1_HUMAN (Q9HA47) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK...	29	8.0
54	PRMA_LEGPL (Q5WZ79) Ribosomal protein L11 methyltransferase (EC ...	29	8.0
55	PRMA_LEGPA (Q5X7S8) Ribosomal protein L11 methyltransferase (EC ...	29	8.0

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  368 bits (945), Expect = e-102
 Identities = 182/187 (97%), Positives = 183/187 (97%)
 Frame = +1

Query: 4   GRSSXKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKG 183
           G+   KQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKG
Sbjct: 21  GKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKG 80

Query: 184 IVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFM 363
           IVDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFM
Sbjct: 81  IVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFM 140

Query: 364 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 543
           TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY
Sbjct: 141 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 200

Query: 544 REAADMI 564
           REAADMI
Sbjct: 201 REAADMI 207

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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  328 bits (840), Expect = 8e-90
 Identities = 165/189 (87%), Positives = 174/189 (92%), Gaps = 2/189 (1%)
 Frame = +1

Query: 4   GRSSXKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD--KWKGLAYDISDDQQDITRG 177
           G+   KQVTSAVNYHGKSS  NRF VMA E +DE + TD  +WKGLAYDISDDQQDITRG
Sbjct: 21  GKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQDRWKGLAYDISDDQQDITRG 79

Query: 178 KGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKN 357
           KG VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFDNTMGGFYIAP+FMDKLVVH+SKN
Sbjct: 80  KGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPSFMDKLVVHISKN 139

Query: 358 FMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQ 537
           FMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLIRQ
Sbjct: 140 FMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQ 198

Query: 538 RYREAADMI 564
           RYREAAD+I
Sbjct: 199 RYREAADII 207

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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  304 bits (778), Expect = 1e-82
 Identities = 149/184 (80%), Positives = 165/184 (89%), Gaps = 3/184 (1%)
 Frame = +1

Query: 22  QVTSAVNYHGKSSKAN-RFTVMAAENIDEKRNTD--KWKGLAYDISDDQQDITRGKGIVD 192
           QV++AV YHGKSS +N RF  MAA+ +DE + TD  +WKGLAYDISDDQQDITRGKG+VD
Sbjct: 30  QVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVD 89

Query: 193 SLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLP 372
           +LFQAP GDGTH AVLSSY+Y+SQG + Y+FDN M GFYIA  FMDKLVVHLSKNFMTLP
Sbjct: 90  NLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLP 149

Query: 373 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 552
           NIK+PLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGELESGNAGEPAKLIRQRYREA
Sbjct: 150 NIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREA 209

Query: 553 ADMI 564
           +D+I
Sbjct: 210 SDLI 213

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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  293 bits (751), Expect = 2e-79
 Identities = 148/178 (83%), Positives = 161/178 (90%), Gaps = 4/178 (2%)
 Frame = +1

Query: 43  YHGKSSKANRFT-VMAAEN-IDEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAP 210
           YHG +   +R   VMAA+  +D+ + TD  +WKGLAYDISDDQQDITRGKGIVDSLFQAP
Sbjct: 28  YHGGNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAP 87

Query: 211 TGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPL 390
            GDGTHEA+LSSYEY+SQGLRKYDFDNTM G YIAPAFMDKL+VHL+KNFMTLPNIK+PL
Sbjct: 88  MGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPL 147

Query: 391 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 564
           ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLIRQRYREAAD+I
Sbjct: 148 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADII 204

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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  281 bits (718), Expect = 1e-75
 Identities = 136/182 (74%), Positives = 156/182 (85%)
 Frame = +1

Query: 19  KQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSL 198
           K+V +   +   + K+N    + A   D++ + D+W+GLAYD SDDQQDITRGKG+VDS+
Sbjct: 36  KKVVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSV 95

Query: 199 FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 378
           FQAP G GTH AVLSSYEYVSQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF+TLPNI
Sbjct: 96  FQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNI 155

Query: 379 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 558
           K+PLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD
Sbjct: 156 KVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 215

Query: 559 MI 564
           +I
Sbjct: 216 LI 217

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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  279 bits (714), Expect = 3e-75
 Identities = 137/172 (79%), Positives = 156/172 (90%), Gaps = 1/172 (0%)
 Frame = +1

Query: 52  KSSKANRFTVMAAE-NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTH 228
           K+S  N F ++A E + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH
Sbjct: 47  KASSGN-FKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105

Query: 229 EAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWG 408
            AV+SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWG
Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG 165

Query: 409 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 564
           GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I
Sbjct: 166 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII 217

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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  279 bits (714), Expect = 3e-75
 Identities = 137/172 (79%), Positives = 156/172 (90%), Gaps = 1/172 (0%)
 Frame = +1

Query: 52  KSSKANRFTVMAAE-NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTH 228
           K+S  N F ++A E + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH
Sbjct: 47  KASSGN-FKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTH 105

Query: 229 EAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWG 408
            AV+SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWG
Sbjct: 106 YAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWG 165

Query: 409 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 564
           GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I
Sbjct: 166 GKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII 217

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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  275 bits (703), Expect = 6e-74
 Identities = 134/178 (75%), Positives = 154/178 (86%), Gaps = 2/178 (1%)
 Frame = +1

Query: 37  VNYHGKSSKANRFTVMAAENIDEKRNTDK--WKGLAYDISDDQQDITRGKGIVDSLFQAP 210
           VN    +SK +  ++    ++DE + TDK  WKGLA+D SDDQQDITRGKG VDSLFQAP
Sbjct: 40  VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAP 99

Query: 211 TGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPL 390
            G GTH A++SSYEY+S GLR+Y+FDN M G+YIAPAFMDKLVVH++KNFMTLPN+K+PL
Sbjct: 100 QGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPL 159

Query: 391 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 564
           ILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGELESGNAGEPAKLIRQRYREAAD+I
Sbjct: 160 ILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADII 217

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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  273 bits (697), Expect = 3e-73
 Identities = 134/187 (71%), Positives = 160/187 (85%), Gaps = 2/187 (1%)
 Frame = +1

Query: 10  SSXKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAYDISDDQQDITRGKG 183
           +S K+V S+   + K +  +   V A + I+E + T  D+W+GLAYD+SDDQQDITRGKG
Sbjct: 35  TSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKG 94

Query: 184 IVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFM 363
           +VDSLFQAP   GTH AV+SS++Y+S GLR+Y+FDN   GFYIAPAF+DKLVVH++KNFM
Sbjct: 95  LVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFM 154

Query: 364 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 543
           TLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY
Sbjct: 155 TLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 214

Query: 544 REAADMI 564
           REA+D+I
Sbjct: 215 REASDLI 221

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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  272 bits (695), Expect = 5e-73
 Identities = 127/164 (77%), Positives = 145/164 (88%)
 Frame = +1

Query: 73  FTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYE 252
           F ++A ++ +++   DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYE
Sbjct: 51  FKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYE 110

Query: 253 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 432
           Y+S GLR Y +DN + GFYIAPAFMDKL VH+ KNF+TLPNIK+PLILG+WGGKGQGKSF
Sbjct: 111 YISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSF 170

Query: 433 QCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 564
           QCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I
Sbjct: 171 QCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII 214

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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  271 bits (694), Expect = 7e-73
 Identities = 132/170 (77%), Positives = 149/170 (87%), Gaps = 4/170 (2%)
 Frame = +1

Query: 67  NRFTVMAAENID----EKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 234
           N+   + AE ID    ++ ++D+WKGL  D SDDQQDITRGKG+VDSLFQAPTG GTH A
Sbjct: 52  NKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHA 111

Query: 235 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGK 414
           VL SYEYVSQGLR+Y+ DN + GFYIAPAFMDKLVVH++KNF+ LPNIK+PLILGIWGGK
Sbjct: 112 VLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGK 171

Query: 415 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 564
           GQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I
Sbjct: 172 GQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEII 221

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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  270 bits (691), Expect = 2e-72
 Identities = 133/170 (78%), Positives = 149/170 (87%), Gaps = 4/170 (2%)
 Frame = +1

Query: 67  NRFTVMAAE--NIDEKRNT--DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 234
           NR   +AAE  + D K+ T  D+WKGL  D SDDQQDI RGKG+VDSLFQAPTG GTH A
Sbjct: 52  NRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHA 111

Query: 235 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGK 414
           VL SYEYVSQGLR+Y+ DNT+ GFYIAP+FMDKLVVH++KNF+ LPNIK+PLILG+WGGK
Sbjct: 112 VLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGK 171

Query: 415 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 564
           GQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I
Sbjct: 172 GQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEII 221

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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  270 bits (689), Expect = 3e-72
 Identities = 133/170 (78%), Positives = 146/170 (85%)
 Frame = +1

Query: 55  SSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEA 234
           SS+    TV AAEN  E++NTDKW  LA D SDDQ DI RGKG+VDSLFQAP   GTH  
Sbjct: 48  SSRTTSMTVKAAEN--EEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVP 105

Query: 235 VLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGK 414
           + SS+EY SQGLRKYD DN +G FYIAPAFMDKLVVH++KNF+ LPNIKIPLILG+WGGK
Sbjct: 106 IQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGK 165

Query: 415 GQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 564
           GQGKSFQCELVFAK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I
Sbjct: 166 GQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLI 215

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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  266 bits (681), Expect = 2e-71
 Identities = 139/189 (73%), Positives = 155/189 (82%), Gaps = 2/189 (1%)
 Frame = +1

Query: 4   GRSSXKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAYDISDDQQDITRG 177
           G S  K V S V  + K +  +   V A + I+E + T  D+WKGLAYDISDDQQDITRG
Sbjct: 34  GTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRG 92

Query: 178 KGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKN 357
           KG+VD LFQAP   GTH AV+SSYEY+S GLR+   DN   GFYIAPAF+DKLVVH++KN
Sbjct: 93  KGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQ--LDNIKDGFYIAPAFLDKLVVHITKN 150

Query: 358 FMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQ 537
           FMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQ
Sbjct: 151 FMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQ 210

Query: 538 RYREAADMI 564
           RYREAAD+I
Sbjct: 211 RYREAADLI 219

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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  265 bits (676), Expect = 9e-71
 Identities = 126/167 (75%), Positives = 146/167 (87%)
 Frame = +1

Query: 64  ANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLS 243
           +NR   + A+ +DE +  D+WKGL  + SDDQQDI RGKG+VDSLFQAPTG GTH A+++
Sbjct: 51  SNRNLRVVAQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMN 109

Query: 244 SYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQG 423
           SYEYVSQ L+ Y  DN + GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILG+WGGKGQG
Sbjct: 110 SYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQG 169

Query: 424 KSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 564
           KSFQCELVF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I
Sbjct: 170 KSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEII 216

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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  200 bits (509), Expect = 2e-51
 Identities = 99/156 (63%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
 Frame = +1

Query: 106 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 276
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 37  RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94

Query: 277 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 456
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L + K
Sbjct: 95  ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 154

Query: 457 MGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 564
           +GI PI+MSAGELESGNAGEPAKLIR RYREA+D+I
Sbjct: 155 LGIAPIVMSAGELESGNAGEPAKLIRTRYREASDII 190

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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  122 bits (306), Expect = 7e-28
 Identities = 54/87 (62%), Positives = 72/87 (82%)
 Frame = +1

Query: 304 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 483
           +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG+   ++S
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLIS 62

Query: 484 AGELESGNAGEPAKLIRQRYREAADMI 564
            GELES +AG+PA+LIR RYRE A++I
Sbjct: 63  GGELESPDAGDPARLIRLRYRETAELI 89

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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  122 bits (305), Expect = 9e-28
 Identities = 54/87 (62%), Positives = 72/87 (82%)
 Frame = +1

Query: 304 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 483
           +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI   ++S
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLIS 62

Query: 484 AGELESGNAGEPAKLIRQRYREAADMI 564
            GELES +AG+PA+LIR RYRE A++I
Sbjct: 63  GGELESPDAGDPARLIRLRYRETAELI 89

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>KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase)
          Length = 198

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 391 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 561
           I+ I GG G GK  QCE +  K G     +S GEL   E  +  E +KLIR    E  D+
Sbjct: 13  IIFIIGGPGSGKGTQCEKLVEKYGFT--HLSTGELLREELASESERSKLIRD-IMERGDL 69

Query: 562 I 564
           +
Sbjct: 70  V 70

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>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +1

Query: 373 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 552
           NIK P  + ++G  G GK+   + V  +   N I +   EL S   GE  K +R+ +R+A
Sbjct: 485 NIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKA 544

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>KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase)
          Length = 193

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 391 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 561
           I+ + GG G GK  QCE +  K G     +S GEL   E  +  E +KLIR    E  D+
Sbjct: 9   IIFLMGGPGSGKGTQCEKLAEKYGFT--HLSTGELLRQELTSESERSKLIRD-IMERGDL 65

Query: 562 I 564
           +
Sbjct: 66  V 66

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>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Flamingo 1) (mFmi1)
          Length = 2920

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +3

Query: 336  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 500
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1927 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1985

Query: 501  -WERWRASQAHQAAVP*G 551
             W R R      A  P G
Sbjct: 1986 WWPRTRFGLPAAAPCPKG 2003

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>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 17/61 (27%), Positives = 32/61 (52%)
 Frame = +1

Query: 376 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 555
           IK P  + ++G  G GK+     V A +G+N + + +  +     GE A++IR+ +  A 
Sbjct: 163 IKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAK 222

Query: 556 D 558
           +
Sbjct: 223 E 223

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>G6PI_PSEHT (Q3IKH4) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 548

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +1

Query: 253 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSF 432
           Y SQ +  YD    M   Y+    M+    H++    T+P   +P+I G+ G  GQ   +
Sbjct: 328 YTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFY 387

Query: 433 QC 438
           QC
Sbjct: 388 QC 389

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>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple|
            epidermal growth factor-like domains 3) (Fragment)
          Length = 2144

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +3

Query: 336  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 500
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1151 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1209

Query: 501  -WERWRASQAHQAAVP*G 551
             W R R      A  P G
Sbjct: 1210 WWPRTRFGLPAAAPCPKG 1227

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>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Epidermal growth factor-like 2) (Multiple epidermal
            growth factor-like domains 3) (Flamingo 1)
          Length = 2923

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
 Frame = +3

Query: 336  CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 500
            C P  SL ++ DP   Q P   G +GRQ  R   P  A V  +G + ++D C RA E   
Sbjct: 1926 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1984

Query: 501  -WERWRASQAHQAAVP*G 551
             W R R      A  P G
Sbjct: 1985 WWPRTRFGLPAAAPCPKG 2002

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>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)|
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase)
          Length = 196

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 385 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 495
           PL++ + GG G GK  QC  +  K G     +SAGEL
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37

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>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)|
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase)
          Length = 196

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +1

Query: 385 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 495
           PL++ + GG G GK  QC  +  K G     +SAGEL
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGEL 37

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>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 17/60 (28%), Positives = 32/60 (53%)
 Frame = +1

Query: 376 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 555
           +K P  L ++G  G GK+     V  +   + I++S   +   +AGE  K++R+ + EA+
Sbjct: 53  LKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEAS 112

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>PTR2_CANAL (P46030) Peptide transporter PTR2|
          Length = 623

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
 Frame = -3

Query: 221 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 75
           P+P+ AWK+ S         CW    + E++Y R          ++FL  S FSAA+++
Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546

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>PCRB_SULAC (Q4JAS3) Protein pcrB homolog|
          Length = 257

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -2

Query: 309 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 133
           +EA  G  E V P+A+  V    +DG+V        EER  + + +G  ++V G+++ +
Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234

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>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 555 CSLTVPLPDELGWLSSVPTLQLSGTHHDG-VDAHLGEHKLTLE 430
           C+L+ P+P   G L+ + TL L+G H  G +   LG+ K  ++
Sbjct: 294 CALSGPIPSCFGQLTKLDTLYLAGNHFSGRIPPELGKCKSMID 336

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>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants|
          Length = 432

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 400 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 558
           ++G  G GKS+  + V  + G     +S+ +L S   GE  +L+RQ +  A +
Sbjct: 167 LYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMARE 219

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>ACCA_STRT2 (Q5M5R1) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 256

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +1

Query: 166 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 336
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 62  IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRSVVTFINTAGAYPGVGAEERGQ 121

Query: 337 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 423
              +++N M + ++K+P+I  I G  G G
Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150

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>TRPC_HALVO (P18304) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)|
          Length = 251

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 26/95 (27%), Positives = 42/95 (44%)
 Frame = -2

Query: 414 LASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRSDVEASHGVVEVVLPQALADVLVGAED 235
           L    T++E    +  G ++ G  +  L       +E   G  E + P+A  DVL+ AE 
Sbjct: 158 LVEVHTREELTAALAAGADIVGINNRDL-----GKLEVDLGTFEELAPEAPEDVLLVAES 212

Query: 234 GLVGAVARGRLEERVHDALPSGDVLLVVGDIVRKT 130
           G+       R+ E   DAL  G  ++  GD+ + T
Sbjct: 213 GVQTVDDARRMREAGADALLVGTAIM-DGDVRQNT 246

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>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +1

Query: 364 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 543
           T   ++ P  + ++G  G GK+   + V  +   N I +   +L S   GE  K IRQ +
Sbjct: 489 TRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTF 548

Query: 544 REA 552
           R+A
Sbjct: 549 RKA 551

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>ACCA_STRT1 (Q5M174) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 256

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +1

Query: 166 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 336
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 62  IQKGKNLQDNLNRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 121

Query: 337 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 423
              +++N M + ++K+P+I  I G  G G
Sbjct: 122 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 150

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>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome|
           regulatory subunit 2)
          Length = 407

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +1

Query: 406 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 558
           G  G GK+   + V ++   + I M+  EL     GE AKL+R  ++ A D
Sbjct: 190 GPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARD 240

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>PRMA_LEGPH (Q5ZYB1) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 289

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = -2

Query: 381 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 217
           + +G  H    ++DN+ +  ++S+  A+H     + +  P+AL +   LV A   L   +
Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISFPEALQNPVHLVIANILLAPLI 233

Query: 216 ARGRLEERVHDALPSGDVLLVVG 148
           +   L+ER H  LPSG  L+  G
Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253

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>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 208

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +1

Query: 379 KIPLILGIWGGKGQGKSFQCELVFAKMG 462
           ++PL++G+ GG G GKS  C ++ A+MG
Sbjct: 4   RLPLLVGVTGGIGSGKSTVCAML-AEMG 30

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>ACCA_STRR6 (Q8DR13) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 255

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +1

Query: 166 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 336
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 61  IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120

Query: 337 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 423
              +++N M + ++K+P+I  I G  G G
Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149

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>ACCA_STRPN (Q9FBB7) Acetyl-coenzyme A carboxylase carboxyl transferase subunit|
           alpha (EC 6.4.1.2) (Acetyl-CoA carboxylase
           carboxyltransferase subunit alpha) (ACCase subunit
           alpha)
          Length = 255

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +1

Query: 166 ITRGKGIVDSL---FQAPTGDGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKL 336
           I +GK + D+L   F  P  +G  +A+    +    G     F NT G +    A     
Sbjct: 61  IQKGKSLQDNLKRNFGQPHPEGYRKALRLMKQAEKFGRPVVTFINTAGAYPGVGAEERGQ 120

Query: 337 VVHLSKNFMTLPNIKIPLILGIWGGKGQG 423
              +++N M + ++K+P+I  I G  G G
Sbjct: 121 GEAIARNLMEMSDLKVPIIAIIIGEGGSG 149

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>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa|
           protein) (ORF 2)
          Length = 142

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -3

Query: 464 MPILANTSSHWNDFP*PL-PPQIPKMSGILMLGRVMKFLERWTTSLS 327
           M I++ TSS W   P PL PPQ+P +   ++  R  +   + T S S
Sbjct: 49  MSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSAS 94

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>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)|
           (ATP-AMP transphosphorylase)
          Length = 210

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 355 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 495
           N   L    +P+   I GG G GK  QC+ + AK G+    +S+G+L
Sbjct: 11  NLAPLKAAGVPIFF-IVGGPGSGKGTQCDKIVAKYGLT--HLSSGDL 54

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>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC|
           2.7.4.3) (ATP-AMP transphosphorylase)
          Length = 283

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 385 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 495
           PL + I G    GK  QCEL+  K G+  + +SAG+L
Sbjct: 64  PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDL 98

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>DPO3A_LACLA (Q9CI70) DNA polymerase III alpha subunit (EC 2.7.7.7)|
          Length = 1060

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
 Frame = +1

Query: 40   NYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGD 219
            N+H K +      + A +  D  R       LAY+++D    +       D +F A +G 
Sbjct: 807  NFHKKENILPLIQIGAFDYADSNRGK-----LAYNLADHANLLNYYS---DDIFMASSGG 858

Query: 220  GT--HEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 378
            G   HEA     E  S+   KYDF+  + G  + P  +  L      NF  L  +
Sbjct: 859  GFAYHEA-----EDYSE-TEKYDFEKNLLGIGVTPHPLQNLARRFEGNFTPLAQL 907

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>OR65B_DROME (P82983) Putative odorant receptor 65b|
          Length = 385

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = -3

Query: 224 VPSPVGAWKSESTMPFPLVMSCWSSEISYARPFHLSVFLFSSMFSAAMTVNLLALELLPW 45
           + SP+  W  +  +PF         E S     H  ++LF S F+      LL +E L  
Sbjct: 144 ITSPM--WVHQQNLPFHAAFPFQWHEKSLHPISHAIIYLFQSYFAVYCLTWLLCIEGLSI 201

Query: 44  *FTAEVTCXLELL 6
              AE+T  +E+L
Sbjct: 202 CIYAEITFGIEVL 214

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>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
 Frame = +1

Query: 352 KNFMTLPNIKIPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 504
           +  + LP+++  L  G+         +G  G GK+   + V A+       +SA  L S 
Sbjct: 355 QEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK 414

Query: 505 NAGEPAKLIRQRYREAADM 561
             GE  KL+R  +  A ++
Sbjct: 415 YVGEGEKLVRALFAVAREL 433

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>RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107|
          Length = 1070

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +1

Query: 52  KSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAP 210
           K  + +   +++ E++  K++TDK+  L   +SD+   I   K  V+S +  P
Sbjct: 688 KQGEESTGKLISTEDVTSKKDTDKFSHLFEGLSDNDDHINDEKPAVNSKYTTP 740

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>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
 Frame = +1

Query: 352 KNFMTLPNIKIPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 504
           +  + LP+++  L  G+         +G  G GK+   + V A+       +SA  L S 
Sbjct: 353 QEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK 412

Query: 505 NAGEPAKLIRQRYREAADM 561
             GE  KL+R  +  A ++
Sbjct: 413 YVGEGEKLVRALFAVAREL 431

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>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC|
           3.1.3.48) (Protein tyrosine phosphatase PTP-BL)
           (Protein-tyrosine phosphatase RIP) (protein tyrosine
           phosphatase DPZPTP) (PTP36)
          Length = 2453

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +1

Query: 142 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRK 276
           D S   +D  RGKG+            THEA LS   +V++GL K
Sbjct: 195 DRSQAIRDRLRGKGLPTGRSSTSDALDTHEAPLSQQTFVNKGLSK 239

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>UCK1_MOUSE (P52623) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine|
           monophosphokinase 1) (Cytidine monophosphokinase 1)
          Length = 277

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 385 PLILGIWGGKGQGKSFQCELVFAKMGINPI 474
           P ++G+ GG   GKS  CE +   +G N +
Sbjct: 23  PFLIGVSGGTASGKSTVCEKIMELLGQNEV 52

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>UCK1_HUMAN (Q9HA47) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine|
           monophosphokinase 1) (Cytidine monophosphokinase 1)
          Length = 277

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 385 PLILGIWGGKGQGKSFQCELVFAKMGINPI 474
           P ++G+ GG   GKS  CE +   +G N +
Sbjct: 23  PFLIGVSGGTASGKSTVCEKIMELLGQNEV 52

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>PRMA_LEGPL (Q5WZ79) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 289

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = -2

Query: 381 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 217
           + +G  H    ++DN+ +  ++S+  A+H     + +  P+AL +   LV A   L   +
Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISSPEALQNPVHLVIANILLAPLI 233

Query: 216 ARGRLEERVHDALPSGDVLLVVG 148
           +   L+ER H  LPSG  L+  G
Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253

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>PRMA_LEGPA (Q5X7S8) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 289

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
 Frame = -2

Query: 381 LDVGQGHEVFGEMDNKLVHESRSDVEASH---GVVEVVLPQALADV--LVGAEDGLVGAV 217
           + +G  H    ++DN+ +  ++S+  A+H     + +  P+AL +   L+ A   L   +
Sbjct: 174 IKLGAKHVYAVDIDNQALQATQSNAHANHITESQLSISTPEALQNPVHLIIANILLAPLI 233

Query: 216 ARGRLEERVHDALPSGDVLLVVG 148
           +   L+ER H  LPSG  L+  G
Sbjct: 234 S---LKERFHQLLPSGAHLVTSG 253


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.134    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,144,427
Number of Sequences: 219361
Number of extensions: 1715582
Number of successful extensions: 5719
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 5564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5707
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result