ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal30i23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470257.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 305 bits (154), Expect = 1e-79 Identities = 286/329 (86%), Gaps = 1/329 (0%) Strand = Plus / Plus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 |||||||||| || ||| |||||||||||||| | |||||||||||||| || ||| || Sbjct: 1631 attttgagaagaccttggagtactggcaacaag-ataagtggaatggttccttatctctc 1689 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 ||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 1690 aagtggcacattgtcaaagatgtgcccaacaatattctcaagcacatcatcctagagaac 1749 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaaggt 191 || || ||||||||| ||||| |||||||||||||| || | |||||||| ||||| Sbjct: 1750 aatgagaacaagccagtgacaaatagccgtgacacacaagaggtaaaccttgaccaaggc 1809 Query: 192 attcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagacttc 251 ||||| ||||| ||||||||||| |||||||| || |||||||| ||| |||| ||||| Sbjct: 1810 attcaaatgcttaagatattcaaggagcatgtcagtaagacctccatcttggatgacttt 1869 Query: 252 accttctacgagaaccgtcagaaattgatgcaggagaagagaataaaacaacagcagatc 311 | ||||| |||||||||||||| ||||||||||| ||||| | ||||||||||||||| Sbjct: 1870 gctttctatgagaaccgtcagaagttgatgcaggaaaagagggtgaaacaacagcagatc 1929 Query: 312 caaaagcaggtgtgggacagtagggctcc 340 ||||||||||| ||||||||||||||||| Sbjct: 1930 caaaagcaggtctgggacagtagggctcc 1958 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 511 ctccagccgttacctacgcggcaaaggtggcccaaacagcagcggccgagaag 563 |||||| ||||||||| || || ||||| ||||||||||||||| | |||||| Sbjct: 2063 ctccagtcgttacctatgcagcgaaggtcgcccaaacagcagcgactgagaag 2115
>dbj|AK119641.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-F09, full insert sequence Length = 2166 Score = 305 bits (154), Expect = 1e-79 Identities = 286/329 (86%), Gaps = 1/329 (0%) Strand = Plus / Plus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 |||||||||| || ||| |||||||||||||| | |||||||||||||| || ||| || Sbjct: 1279 attttgagaagaccttggagtactggcaacaag-ataagtggaatggttccttatctctc 1337 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 ||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 1338 aagtggcacattgtcaaagatgtgcccaacaatattctcaagcacatcatcctagagaac 1397 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaaggt 191 || || ||||||||| ||||| |||||||||||||| || | |||||||| ||||| Sbjct: 1398 aatgagaacaagccagtgacaaatagccgtgacacacaagaggtaaaccttgaccaaggc 1457 Query: 192 attcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagacttc 251 ||||| ||||| ||||||||||| |||||||| || |||||||| ||| |||| ||||| Sbjct: 1458 attcaaatgcttaagatattcaaggagcatgtcagtaagacctccatcttggatgacttt 1517 Query: 252 accttctacgagaaccgtcagaaattgatgcaggagaagagaataaaacaacagcagatc 311 | ||||| |||||||||||||| ||||||||||| ||||| | ||||||||||||||| Sbjct: 1518 gctttctatgagaaccgtcagaagttgatgcaggaaaagagggtgaaacaacagcagatc 1577 Query: 312 caaaagcaggtgtgggacagtagggctcc 340 ||||||||||| ||||||||||||||||| Sbjct: 1578 caaaagcaggtctgggacagtagggctcc 1606 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 511 ctccagccgttacctacgcggcaaaggtggcccaaacagcagcggccgagaag 563 |||||| ||||||||| || || ||||| ||||||||||||||| | |||||| Sbjct: 1711 ctccagtcgttacctatgcagcgaaggtcgcccaaacagcagcgactgagaag 1763
>dbj|AK111578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075E22, full insert sequence Length = 2862 Score = 305 bits (154), Expect = 1e-79 Identities = 286/329 (86%), Gaps = 1/329 (0%) Strand = Plus / Plus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 |||||||||| || ||| |||||||||||||| | |||||||||||||| || ||| || Sbjct: 1868 attttgagaagaccttggagtactggcaacaag-ataagtggaatggttccttatctctc 1926 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 ||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 1927 aagtggcacattgtcaaagatgtgcccaacaatattctcaagcacatcatcctagagaac 1986 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaaggt 191 || || ||||||||| ||||| |||||||||||||| || | |||||||| ||||| Sbjct: 1987 aatgagaacaagccagtgacaaatagccgtgacacacaagaggtaaaccttgaccaaggc 2046 Query: 192 attcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagacttc 251 ||||| ||||| ||||||||||| |||||||| || |||||||| ||| |||| ||||| Sbjct: 2047 attcaaatgcttaagatattcaaggagcatgtcagtaagacctccatcttggatgacttt 2106 Query: 252 accttctacgagaaccgtcagaaattgatgcaggagaagagaataaaacaacagcagatc 311 | ||||| |||||||||||||| ||||||||||| ||||| | ||||||||||||||| Sbjct: 2107 gctttctatgagaaccgtcagaagttgatgcaggaaaagagggtgaaacaacagcagatc 2166 Query: 312 caaaagcaggtgtgggacagtagggctcc 340 ||||||||||| ||||||||||||||||| Sbjct: 2167 caaaagcaggtctgggacagtagggctcc 2195 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 511 ctccagccgttacctacgcggcaaaggtggcccaaacagcagcggccgagaag 563 |||||| ||||||||| || || ||||| ||||||||||||||| | |||||| Sbjct: 2300 ctccagtcgttacctatgcagcgaaggtcgcccaaacagcagcgactgagaag 2352
>dbj|AK062076.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F04, full insert sequence Length = 1771 Score = 305 bits (154), Expect = 1e-79 Identities = 286/329 (86%), Gaps = 1/329 (0%) Strand = Plus / Plus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 |||||||||| || ||| |||||||||||||| | |||||||||||||| || ||| || Sbjct: 780 attttgagaagaccttggagtactggcaacaag-ataagtggaatggttccttatctctc 838 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 ||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 839 aagtggcacattgtcaaagatgtgcccaacaatattctcaagcacatcatcctagagaac 898 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaaggt 191 || || ||||||||| ||||| |||||||||||||| || | |||||||| ||||| Sbjct: 899 aatgagaacaagccagtgacaaatagccgtgacacacaagaggtaaaccttgaccaaggc 958 Query: 192 attcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagacttc 251 ||||| ||||| ||||||||||| |||||||| || |||||||| ||| |||| ||||| Sbjct: 959 attcaaatgcttaagatattcaaggagcatgtcagtaagacctccatcttggatgacttt 1018 Query: 252 accttctacgagaaccgtcagaaattgatgcaggagaagagaataaaacaacagcagatc 311 | ||||| |||||||||||||| ||||||||||| ||||| | ||||||||||||||| Sbjct: 1019 gctttctatgagaaccgtcagaagttgatgcaggaaaagagggtgaaacaacagcagatc 1078 Query: 312 caaaagcaggtgtgggacagtagggctcc 340 ||||||||||| ||||||||||||||||| Sbjct: 1079 caaaagcaggtctgggacagtagggctcc 1107 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 511 ctccagccgttacctacgcggcaaaggtggcccaaacagcagcggccgagaag 563 |||||| ||||||||| || || ||||| ||||||||||||||| | |||||| Sbjct: 1212 ctccagtcgttacctatgcagcgaaggtcgcccaaacagcagcgactgagaag 1264
>dbj|AK111489.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A14, full insert sequence Length = 2762 Score = 297 bits (150), Expect = 2e-77 Identities = 285/329 (86%), Gaps = 1/329 (0%) Strand = Plus / Plus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 |||||||||| || ||| |||||||||||||| | |||||||||||||| || ||| || Sbjct: 1816 attttgagaagaccttggagtactggcaacaag-ataagtggaatggttccttatctctc 1874 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 ||||||| ||||||||| ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 1875 aagtggcgcattgtcaaagatgtgcccaacaatattctcaagcacatcatcctagagaac 1934 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaaggt 191 || || ||||||||| ||||| |||||||||||||| || | |||||||| ||||| Sbjct: 1935 aatgagaacaagccagtgacaaatagccgtgacacacaagaggtaaaccttgaccaaggc 1994 Query: 192 attcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagacttc 251 ||||| ||||| ||||||||||| |||||||| || |||||||| ||| |||| ||||| Sbjct: 1995 attcaaatgcttaagatattcaaggagcatgtcagtaagacctccatcttggatgacttt 2054 Query: 252 accttctacgagaaccgtcagaaattgatgcaggagaagagaataaaacaacagcagatc 311 | ||||| |||||||||||||| ||||||||||| ||||| | ||||||||||||||| Sbjct: 2055 gctttctatgagaaccgtcagaagttgatgcaggaaaagagggtgaaacaacagcagatc 2114 Query: 312 caaaagcaggtgtgggacagtagggctcc 340 ||||||||||| ||||||||||||||||| Sbjct: 2115 caaaagcaggtctgggacagtagggctcc 2143 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 511 ctccagccgttacctacgcggcaaaggtggcccaaacagcagcggccgagaag 563 |||||| ||||||||| || || ||||| ||||||||||||||| | |||||| Sbjct: 2248 ctccagtcgttacctatgcagcgaaggtcgcccaaacagcagcgactgagaag 2300
>dbj|AK103405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128D05, full insert sequence Length = 1271 Score = 297 bits (150), Expect = 2e-77 Identities = 285/329 (86%), Gaps = 1/329 (0%) Strand = Plus / Plus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 |||||||||| || ||| |||||||||||||| | |||||||||||||| || ||| || Sbjct: 444 attttgagaagaccttggagtactggcaacaag-ataagtggaatggttccttatctctc 502 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 ||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 503 aagtggcacattgtcaaagatgtgcccaacaatattctcaagcacatcatcctagagaac 562 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaaggt 191 || || ||||||||| ||||| |||||||||||||| || | |||||||| ||||| Sbjct: 563 aatgagaacaagccagtgacaaatagccgtgacacacaagaggtaaaccttgaccaaggc 622 Query: 192 attcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagacttc 251 ||||| ||||| ||||||||||| ||||| || || |||||||| ||| |||| ||||| Sbjct: 623 attcaaatgcttaagatattcaaggagcacgtcagtaagacctccatcttggatgacttt 682 Query: 252 accttctacgagaaccgtcagaaattgatgcaggagaagagaataaaacaacagcagatc 311 | ||||| |||||||||||||| ||||||||||| ||||| | ||||||||||||||| Sbjct: 683 gctttctatgagaaccgtcagaagttgatgcaggaaaagagggtgaaacaacagcagatc 742 Query: 312 caaaagcaggtgtgggacagtagggctcc 340 ||||||||||| ||||||||||||||||| Sbjct: 743 caaaagcaggtctgggacagtagggctcc 771 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 511 ctccagccgttacctacgcggcaaaggtggcccaaacagcagcggccgagaag 563 |||||| ||||||||| || || ||||| ||||||||||||||| | |||||| Sbjct: 876 ctccagtcgttacctatgcagcgaaggtcgcccaaacagcagcgactgagaag 928
>gb|DQ083235.1| Oryza sativa (indica cultivar-group) clone 7B8H91 mRNA sequence Length = 863 Score = 293 bits (148), Expect = 4e-76 Identities = 269/308 (87%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 33 actggcaacaagnacaagtggaatggttcattctctgtcaagtggcacattgtcaaggat 92 |||||||||||| | |||||||||||||| || ||| ||||||||||||||||||| ||| Sbjct: 1 actggcaacaag-ataagtggaatggttccttatctctcaagtggcacattgtcaaagat 59 Query: 93 gttcccaacaacattctcaagcacatcgtcctagagaacaacgaaggcaagccagtcaca 152 || |||||||| ||||||||||||||| ||||||||||||| || ||||||||| ||| Sbjct: 60 gtgcccaacaatattctcaagcacatcatcctagagaacaatgagaacaagccagtgaca 119 Query: 153 aacagccgtgacacacaggatatcaaccttgagcaaggtattcagatgctcaagatattc 212 || |||||||||||||| || | |||||||| ||||| ||||| ||||| ||||||||| Sbjct: 120 aatagccgtgacacacaagaggtaaaccttgaccaaggcattcaaatgcttaagatattc 179 Query: 213 aaagagcatgtgagcaagacctctatcctggaagacttcaccttctacgagaaccgtcag 272 || |||||||| || |||||||| ||| |||| ||||| | ||||| |||||||||||| Sbjct: 180 aaggagcatgtcagtaagacctccatcttggatgactttgctttctatgagaaccgtcag 239 Query: 273 aaattgatgcaggagaagagaataaaacaacagcagatccaaaagcaggtgtgggacagt 332 || ||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||| Sbjct: 240 aagttgatgcaggaaaagagggtgaaacaacagcagatccaaaagcaggtctgggacagt 299 Query: 333 agggctcc 340 |||||||| Sbjct: 300 agggctcc 307
>gb|BT016816.1| Zea mays clone Contig649 mRNA sequence Length = 1830 Score = 274 bits (138), Expect = 3e-70 Identities = 278/324 (85%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 ||||||||||||| |||| ||| |||||||| | |||||||||||||||| |||||||| Sbjct: 824 attttgagaaaaccctggggtattggcaaca-ggacaagtggaatggttccttctctgtt 882 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 |||||||||||||||||||| || || |||||||||||||| |||||| ||||||||||| Sbjct: 883 aagtggcacattgtcaaggacgtgcctaacaacattctcaaacacatcatcctagagaac 942 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaaggt 191 ||||| |||||| ||||| |||||||||||||| || || || |||| || ||||| Sbjct: 943 aacgagaacaagcctgtcacgaacagccgtgacactcaagagatacacctagaacaaggc 1002 Query: 192 attcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagacttc 251 |||||||||||||||||||||| |||||||| |||||||| || |||||||| |||||| Sbjct: 1003 cttcagatgctcaagatattcaaggagcatgtcagcaagacgtccatcctggatgacttc 1062 Query: 252 accttctacgagaaccgtcagaaattgatgcaggagaagagaataaaacaacagcagatc 311 ||||||| |||| || ||||| |||||||||| ||||| ||||| |||||| || Sbjct: 1063 tccttctatgagagtcgccagaagctgatgcaggataagaggtcgaaacagcagcaggtc 1122 Query: 312 caaaagcaggtgtgggacagtagg 335 ||||||||||| |||||||||||| Sbjct: 1123 caaaagcaggtctgggacagtagg 1146 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 523 cctacgcggcaaaggtggcccaaacagca 551 ||||||||||||||||||||||| ||||| Sbjct: 1289 cctacgcggcaaaggtggcccaagcagca 1317
>gb|AY596616.1| Saccharum officinarum clone SCCCCL3005B06, complete sequence Length = 2129 Score = 274 bits (138), Expect = 3e-70 Identities = 278/324 (85%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 |||||||||||||||||| ||| |||||||| | |||||||||||||||| |||||||| Sbjct: 1144 attttgagaaaactctggagtattggcaaca-ggacaagtggaatggttccttctctgtt 1202 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 |||||||||||||||||||| || || ||||| ||||||||||||||| ||||||||||| Sbjct: 1203 aagtggcacattgtcaaggacgtgcctaacaatattctcaagcacatcatcctagagaac 1262 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaaggt 191 || || |||||| ||||| || ||||||||||| ||||| || ||||||| ||||| Sbjct: 1263 aatgagaacaagcctgtcacgaatagccgtgacactcaggagatacaccttgaacaaggc 1322 Query: 192 attcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagacttc 251 |||||||||||||||| ||||| || ||||| |||||||| || |||||||| ||||| Sbjct: 1323 cttcagatgctcaagatcttcaaggatcatgtcagcaagacgtccatcctggatgacttt 1382 Query: 252 accttctacgagaaccgtcagaaattgatgcaggagaagagaataaaacaacagcagatc 311 ||||||| |||| ||| ||||| ||||||||||| ||||| ||||| |||||| || Sbjct: 1383 gccttctatgagagccgccagaagttgatgcaggataagaggtcgaaacagcagcaggtc 1442 Query: 312 caaaagcaggtgtgggacagtagg 335 ||||||||||| |||||||||||| Sbjct: 1443 caaaagcaggtctgggacagtagg 1466 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 gcaaaggtggcccaaacagca 551 ||||||||||||||||||||| Sbjct: 1635 gcaaaggtggcccaaacagca 1655
>gb|BT018844.1| Zea mays clone EL01N0554B10.d mRNA sequence Length = 2441 Score = 258 bits (130), Expect = 2e-65 Identities = 277/324 (85%), Gaps = 2/324 (0%) Strand = Plus / Plus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 ||||||||||||| |||| ||| |||||||| | |||||||||||||||| |||||||| Sbjct: 1469 attttgagaaaaccctggggtattggcaaca-ggacaagtggaatggttccttctctgtt 1527 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 |||||||||||||||||||| || || |||||||||||||| |||||| ||||||||||| Sbjct: 1528 aagtggcacattgtcaaggacgtgcctaacaacattctcaaacacatcatcctagagaac 1587 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaaggt 191 ||||| |||||| ||||| |||||||||||||| || || || |||| || ||||| Sbjct: 1588 aacgagaacaagcctgtcacgaacagccgtgacactcaagagatacacctagaacaaggc 1647 Query: 192 attcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagacttc 251 |||||||||||||||||||||| |||||||| |||||||| || |||||||| |||||| Sbjct: 1648 cttcagatgctcaagatattcaaggagcatgtcagcaagacgtccatcctggatgacttc 1707 Query: 252 accttctacgagaaccgtcagaaattgatgcaggagaagagaataaaacaacagcagatc 311 ||||||| |||| || ||||| |||||||||| ||||| ||||| |||||| || Sbjct: 1708 tccttctatgagagtcgccagaagctgatgcaggataagaggtcgaaacagcagcaggtc 1767 Query: 312 caaaagcaggtgtgggacagtagg 335 | ||||||||| |||||||||||| Sbjct: 1768 c-aaagcaggtctgggacagtagg 1790 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 523 cctacgcggcaaaggtggcccaaacagca 551 ||||||||||||||||||||||| ||||| Sbjct: 1933 cctacgcggcaaaggtggcccaagcagca 1961
>gb|BT016473.1| Zea mays clone Contig306 mRNA sequence Length = 1105 Score = 234 bits (118), Expect = 3e-58 Identities = 273/324 (84%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 ||||||||||||| || | ||| |||||||| | |||||||||| || || |||||||| Sbjct: 906 attttgagaaaaccctagagtattggcaaca-ggacaagtggaacggctccttctctgtt 848 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 |||||||||||||||||||| || |||||||| ||||||||||||||| |||| |||||| Sbjct: 847 aagtggcacattgtcaaggacgtgcccaacaatattctcaagcacatcatcctggagaac 788 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaaggt 191 || || |||||| |||||||||||||||||||| ||||| || ||| || ||||| Sbjct: 787 aatgagaacaagcctgtcacaaacagccgtgacactcaggagatacgcctcgaacaaggc 728 Query: 192 attcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagacttc 251 |||||||||||||||||||||| || ||||| |||||||| || ||||| || ||||| Sbjct: 727 cttcagatgctcaagatattcaaggatcatgtcagcaagacttccatcctcgacgacttt 668 Query: 252 accttctacgagaaccgtcagaaattgatgcaggagaagagaataaaacaacagcagatc 311 ||||||| |||| ||| ||||| ||||||||||| ||||| ||||| |||||| || Sbjct: 667 gccttctatgagagccgccagaagttgatgcaggataagaggtcgaaacagcagcagctc 608 Query: 312 caaaagcaggtgtgggacagtagg 335 ||||||||||| ||||||| |||| Sbjct: 607 caaaagcaggtctgggacactagg 584
>gb|AY103907.1| Zea mays PCO122604 mRNA sequence Length = 2408 Score = 226 bits (114), Expect = 7e-56 Identities = 272/324 (83%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 ||||||||||||| || | ||| |||||||| | |||||||||| || || |||||||| Sbjct: 1467 attttgagaaaaccctagagtattggcaaca-ggacaagtggaacggctccttctctgtt 1525 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 |||||||||||||| ||||| || |||||||| ||||||||||||||| |||| |||||| Sbjct: 1526 aagtggcacattgtgaaggacgtgcccaacaatattctcaagcacatcatcctggagaac 1585 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaaggt 191 || || |||||| |||||||||||||| ||||| ||||| || ||| || ||||| Sbjct: 1586 aatgagaacaagcctgtcacaaacagccgcgacactcaggagatacgcctcgaacaaggc 1645 Query: 192 attcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagacttc 251 |||||||||||||||||||||| || ||||| |||||||| || ||||| || ||||| Sbjct: 1646 cttcagatgctcaagatattcaaggatcatgtcagcaagacttccatcctcgacgacttt 1705 Query: 252 accttctacgagaaccgtcagaaattgatgcaggagaagagaataaaacaacagcagatc 311 |||||||||||| ||| ||||| ||||||||||| ||||| ||||| |||||| || Sbjct: 1706 gccttctacgagagccgccagaagttgatgcaggataagaggtcgaaacagcagcagctc 1765 Query: 312 caaaagcaggtgtgggacagtagg 335 ||||||||||| ||||||| |||| Sbjct: 1766 caaaagcaggtctgggacactagg 1789
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 157 bits (79), Expect = 6e-35 Identities = 139/158 (87%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 |||||||||| || ||| |||||||||||||| | |||||||||||||| || ||| || Sbjct: 3109071 attttgagaagaccttggagtactggcaacaag-ataagtggaatggttccttatctctc 3109013 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 ||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 3109012 aagtggcacattgtcaaagatgtgcccaacaatattctcaagcacatcatcctagagaac 3108953 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacaca 169 || || ||||||||| ||||| |||||||||||||| Sbjct: 3108952 aatgagaacaagccagtgacaaatagccgtgacacaca 3108915 Score = 139 bits (70), Expect = 1e-29 Identities = 127/146 (86%) Strand = Plus / Minus Query: 177 aaccttgagcaaggtattcagatgctcaagatattcaaagagcatgtgagcaagacctct 236 |||||||| ||||| ||||| ||||| ||||||||||| |||||||| || |||||||| Sbjct: 3108819 aaccttgaccaaggcattcaaatgcttaagatattcaaggagcatgtcagtaagacctcc 3108760 Query: 237 atcctggaagacttcaccttctacgagaaccgtcagaaattgatgcaggagaagagaata 296 ||| |||| ||||| | ||||| |||||||||||||| ||||||||||| ||||| | Sbjct: 3108759 atcttggatgactttgctttctatgagaaccgtcagaagttgatgcaggaaaagagggtg 3108700 Query: 297 aaacaacagcagatccaaaagcaggt 322 |||||||||||||||||||||||||| Sbjct: 3108699 aaacaacagcagatccaaaagcaggt 3108674 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 70 tcaagtggcacattgtcaaggatgttcccaacaacat 106 |||||||||| ||||||||||||| ||||||||||| Sbjct: 30488079 tcaagtggcatgttgtcaaggatgtacccaacaacat 30488115 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 511 ctccagccgttacctacgcggcaaaggtggcccaaacagcagcggccgagaag 563 |||||| ||||||||| || || ||||| ||||||||||||||| | |||||| Sbjct: 3108454 ctccagtcgttacctatgcagcgaaggtcgcccaaacagcagcgactgagaag 3108402 Score = 44.1 bits (22), Expect = 0.57 Identities = 91/114 (79%) Strand = Plus / Plus Query: 180 cttgagcaaggtattcagatgctcaagatattcaaagagcatgtgagcaagacctctatc 239 |||||||||||| || | ||||||||||| ||||| || || | |||||||| || ||| Sbjct: 30488541 cttgagcaaggtcttgaaatgctcaagattttcaaggaccacatcagcaagacatcaatc 30488600 Query: 240 ctggaagacttcaccttctacgagaaccgtcagaaattgatgcaggagaagaga 293 |||| || || || ||||||||||| || || ||||||||||||||||| Sbjct: 30488601 ttggatgattttggtttttacgagaaccggcaaaagctgatgcaggagaagaga 30488654 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggcagagaaagccgcccct 500 |||||||||||||||||||| Sbjct: 8815974 cggcagagaaagccgcccct 8815955
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 157 bits (79), Expect = 6e-35 Identities = 139/158 (87%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 |||||||||| || ||| |||||||||||||| | |||||||||||||| || ||| || Sbjct: 32084 attttgagaagaccttggagtactggcaacaag-ataagtggaatggttccttatctctc 32026 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 ||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 32025 aagtggcacattgtcaaagatgtgcccaacaatattctcaagcacatcatcctagagaac 31966 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacaca 169 || || ||||||||| ||||| |||||||||||||| Sbjct: 31965 aatgagaacaagccagtgacaaatagccgtgacacaca 31928 Score = 139 bits (70), Expect = 1e-29 Identities = 127/146 (86%) Strand = Plus / Minus Query: 177 aaccttgagcaaggtattcagatgctcaagatattcaaagagcatgtgagcaagacctct 236 |||||||| ||||| ||||| ||||| ||||||||||| |||||||| || |||||||| Sbjct: 31832 aaccttgaccaaggcattcaaatgcttaagatattcaaggagcatgtcagtaagacctcc 31773 Query: 237 atcctggaagacttcaccttctacgagaaccgtcagaaattgatgcaggagaagagaata 296 ||| |||| ||||| | ||||| |||||||||||||| ||||||||||| ||||| | Sbjct: 31772 atcttggatgactttgctttctatgagaaccgtcagaagttgatgcaggaaaagagggtg 31713 Query: 297 aaacaacagcagatccaaaagcaggt 322 |||||||||||||||||||||||||| Sbjct: 31712 aaacaacagcagatccaaaagcaggt 31687 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 511 ctccagccgttacctacgcggcaaaggtggcccaaacagcagcggccgagaag 563 |||||| ||||||||| || || ||||| ||||||||||||||| | |||||| Sbjct: 31467 ctccagtcgttacctatgcagcgaaggtcgcccaaacagcagcgactgagaag 31415
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 157 bits (79), Expect = 6e-35 Identities = 139/158 (87%), Gaps = 1/158 (0%) Strand = Plus / Minus Query: 12 attttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtc 71 |||||||||| || ||| |||||||||||||| | |||||||||||||| || ||| || Sbjct: 3109182 attttgagaagaccttggagtactggcaacaag-ataagtggaatggttccttatctctc 3109124 Query: 72 aagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagagaac 131 ||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 3109123 aagtggcacattgtcaaagatgtgcccaacaatattctcaagcacatcatcctagagaac 3109064 Query: 132 aacgaaggcaagccagtcacaaacagccgtgacacaca 169 || || ||||||||| ||||| |||||||||||||| Sbjct: 3109063 aatgagaacaagccagtgacaaatagccgtgacacaca 3109026 Score = 139 bits (70), Expect = 1e-29 Identities = 127/146 (86%) Strand = Plus / Minus Query: 177 aaccttgagcaaggtattcagatgctcaagatattcaaagagcatgtgagcaagacctct 236 |||||||| ||||| ||||| ||||| ||||||||||| |||||||| || |||||||| Sbjct: 3108930 aaccttgaccaaggcattcaaatgcttaagatattcaaggagcatgtcagtaagacctcc 3108871 Query: 237 atcctggaagacttcaccttctacgagaaccgtcagaaattgatgcaggagaagagaata 296 ||| |||| ||||| | ||||| |||||||||||||| ||||||||||| ||||| | Sbjct: 3108870 atcttggatgactttgctttctatgagaaccgtcagaagttgatgcaggaaaagagggtg 3108811 Query: 297 aaacaacagcagatccaaaagcaggt 322 |||||||||||||||||||||||||| Sbjct: 3108810 aaacaacagcagatccaaaagcaggt 3108785 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 70 tcaagtggcacattgtcaaggatgttcccaacaacat 106 |||||||||| ||||||||||||| ||||||||||| Sbjct: 30579501 tcaagtggcatgttgtcaaggatgtacccaacaacat 30579537 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 511 ctccagccgttacctacgcggcaaaggtggcccaaacagcagcggccgagaag 563 |||||| ||||||||| || || ||||| ||||||||||||||| | |||||| Sbjct: 3108565 ctccagtcgttacctatgcagcgaaggtcgcccaaacagcagcgactgagaag 3108513 Score = 44.1 bits (22), Expect = 0.57 Identities = 91/114 (79%) Strand = Plus / Plus Query: 180 cttgagcaaggtattcagatgctcaagatattcaaagagcatgtgagcaagacctctatc 239 |||||||||||| || | ||||||||||| ||||| || || | |||||||| || ||| Sbjct: 30579963 cttgagcaaggtcttgaaatgctcaagattttcaaggaccacatcagcaagacatcaatc 30580022 Query: 240 ctggaagacttcaccttctacgagaaccgtcagaaattgatgcaggagaagaga 293 |||| || || || ||||||||||| || || ||||||||||||||||| Sbjct: 30580023 ttggatgattttggtttttacgagaaccggcaaaagctgatgcaggagaagaga 30580076 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggcagagaaagccgcccct 500 |||||||||||||||||||| Sbjct: 8813809 cggcagagaaagccgcccct 8813790
>gb|AY596615.1| Saccharum officinarum clone SCAGLR1043A01, complete sequence Length = 1547 Score = 101 bits (51), Expect = 3e-18 Identities = 195/243 (80%) Strand = Plus / Minus Query: 46 acaagtggaatggttcattctctgtcaagtggcacattgtcaaggatgttcccaacaaca 105 ||||||||| ||||| ||| ||||||||||||||||||| |||||| |||| |||| | Sbjct: 943 acaagtggactggttgtttccctgtcaagtggcacattgtgaaggatattccaaacagct 884 Query: 106 ttctcaagcacatcgtcctagagaacaacgaaggcaagccagtcacaaacagccgtgaca 165 | || ||||||||| | || |||||||| ||| ||||||||||||||||||| | || | Sbjct: 883 tgctgaagcacatcattctcgagaacaatgaaaacaagccagtcacaaacagcagagata 824 Query: 166 cacaggatatcaaccttgagcaaggtattcagatgctcaagatattcaaagagcatgtga 225 |||| || | || ||||||||||| |||| |||||||||| ||||| || ||||| Sbjct: 823 cacatgaggtgaagcttgagcaaggccttcaagtgctcaagattttcaaggatcatgtct 764 Query: 226 gcaagacctctatcctggaagacttcaccttctacgagaaccgtcagaaattgatgcagg 285 | ||||| || || ||||| ||||| ||| ||||| || ||| |||| |||||||| | Sbjct: 763 ggaagacatccatactggatgactttggcttttacgataatcgtgagaagttgatgcaag 704 Query: 286 aga 288 ||| Sbjct: 703 aga 701
>gb|AY245605.1| Avena sativa putative RNA-binding protein mRNA, partial cds Length = 669 Score = 97.6 bits (49), Expect = 4e-17 Identities = 127/153 (83%) Strand = Plus / Plus Query: 141 aagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaaggtattcagatg 200 ||||| || |||||||||||||||||||| || | || |||||||||||| |||| ||| Sbjct: 282 aagcctgtgacaaacagccgtgacacacaagaggttaagcttgagcaaggtcttcaaatg 341 Query: 201 ctcaagatattcaaagagcatgtgagcaagacctctatcctggaagacttcaccttctac 260 |||||||| ||||| || ||||| ||||||||||| || |||| || || | || ||| Sbjct: 342 ctcaagattttcaaggaacatgtcagcaagacctcaattttggatgattttgcattttac 401 Query: 261 gagaaccgtcagaaattgatgcaggagaagaga 293 |||||||| || || ||||||||||| |||||| Sbjct: 402 gagaaccgacaaaagttgatgcaggaaaagaga 434 Score = 50.1 bits (25), Expect = 0.009 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 35 tggcaacaagnacaagtggaatggttcattctctgtcaagtggcacattgtcaagga 91 |||||||||| ||||||||||||| | || || |||||||||||||||||||||| Sbjct: 177 tggcaacaag-acaagtggaatggctgcttttcaatcaagtggcacattgtcaagga 232
>gb|AY105053.1| Zea mays PCO093351 mRNA sequence Length = 1136 Score = 81.8 bits (41), Expect = 3e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 46 acaagtggaatggttcattctctgtcaagtggcacattgtcaaggatgttcccaacaaca 105 ||||||||| ||||| ||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 1021 acaagtggactggttgtttccctgtcaagtggcacattgtgaaggatgttccaaacagtt 1080 Query: 106 ttctcaagcacatcgtcctagagaacaacgaaggcaagccagtcacaaacagc 158 | || ||||||||| | || |||||||| ||| ||||||||| ||||||||| Sbjct: 1081 tgctgaagcacatcattctcgagaacaatgaaaacaagccagtgacaaacagc 1133
>ref|XM_469739.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2463 Score = 71.9 bits (36), Expect = 3e-09 Identities = 177/224 (79%) Strand = Plus / Plus Query: 70 tcaagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagaga 129 |||||||||| ||||||||||||| ||||||||||| | |||||||| | || | Sbjct: 1655 tcaagtggcatgttgtcaaggatgtacccaacaacatcttgaagcacattacattggata 1714 Query: 130 acaacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaag 189 ||||||| ||||| || |||||||||||||||||||| || | || |||||||||| Sbjct: 1715 acaacgacaataagcctgtgacaaacagccgtgacacacaagaggttaagcttgagcaag 1774 Query: 190 gtattcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagact 249 || || | ||||||||||| ||||| || || | |||||||| || ||| |||| || | Sbjct: 1775 gtcttgaaatgctcaagattttcaaggaccacatcagcaagacatcaatcttggatgatt 1834 Query: 250 tcaccttctacgagaaccgtcagaaattgatgcaggagaagaga 293 | || ||||||||||| || || ||||||||||||||||| Sbjct: 1835 ttggtttttacgagaaccggcaaaagctgatgcaggagaagaga 1878
>dbj|AK101299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033J09, full insert sequence Length = 2658 Score = 71.9 bits (36), Expect = 3e-09 Identities = 177/224 (79%) Strand = Plus / Plus Query: 70 tcaagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagaga 129 |||||||||| ||||||||||||| ||||||||||| | |||||||| | || | Sbjct: 1846 tcaagtggcatgttgtcaaggatgtacccaacaacatcttgaagcacattacattggata 1905 Query: 130 acaacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaag 189 ||||||| ||||| || |||||||||||||||||||| || | || |||||||||| Sbjct: 1906 acaacgacaataagcctgtgacaaacagccgtgacacacaagaggttaagcttgagcaag 1965 Query: 190 gtattcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagact 249 || || | ||||||||||| ||||| || || | |||||||| || ||| |||| || | Sbjct: 1966 gtcttgaaatgctcaagattttcaaggaccacatcagcaagacatcaatcttggatgatt 2025 Query: 250 tcaccttctacgagaaccgtcagaaattgatgcaggagaagaga 293 | || ||||||||||| || || ||||||||||||||||| Sbjct: 2026 ttggtttttacgagaaccggcaaaagctgatgcaggagaagaga 2069
>dbj|AK068139.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134C01, full insert sequence Length = 1659 Score = 71.9 bits (36), Expect = 3e-09 Identities = 177/224 (79%) Strand = Plus / Plus Query: 70 tcaagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctagaga 129 |||||||||| ||||||||||||| ||||||||||| | |||||||| | || | Sbjct: 843 tcaagtggcatgttgtcaaggatgtacccaacaacatcttgaagcacattacattggata 902 Query: 130 acaacgaaggcaagccagtcacaaacagccgtgacacacaggatatcaaccttgagcaag 189 ||||||| ||||| || |||||||||||||||||||| || | || |||||||||| Sbjct: 903 acaacgacaataagcctgtgacaaacagccgtgacacacaagaggttaagcttgagcaag 962 Query: 190 gtattcagatgctcaagatattcaaagagcatgtgagcaagacctctatcctggaagact 249 || || | ||||||||||| ||||| || || | |||||||| || ||| |||| || | Sbjct: 963 gtcttgaaatgctcaagattttcaaggaccacatcagcaagacatcaatcttggatgatt 1022 Query: 250 tcaccttctacgagaaccgtcagaaattgatgcaggagaagaga 293 | || ||||||||||| || || ||||||||||||||||| Sbjct: 1023 ttggtttttacgagaaccggcaaaagctgatgcaggagaagaga 1066
>gb|BT018022.1| Zea mays clone EL01N0529E01.c mRNA sequence Length = 1334 Score = 65.9 bits (33), Expect = 2e-07 Identities = 78/92 (84%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 14 tttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtcaa 73 ||||| || ||| ||| ||| |||||||||| ||||||||||||||| || | |||| Sbjct: 461 tttgataagactgtggagtattggcaacaag-acaagtggaatggttgttttccactcaa 519 Query: 74 gtggcacattgtcaaggatgttcccaacaaca 105 ||||||||| ||||||||||| |||||||||| Sbjct: 520 gtggcacatagtcaaggatgtgcccaacaaca 551
>gb|AY107947.1| Zea mays PCO070958 mRNA sequence Length = 948 Score = 65.9 bits (33), Expect = 2e-07 Identities = 78/92 (84%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 14 tttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtcaa 73 ||||| || ||| ||| ||| |||||||||| ||||||||||||||| || | |||| Sbjct: 116 tttgataagactgtggagtattggcaacaag-acaagtggaatggttgttttccactcaa 174 Query: 74 gtggcacattgtcaaggatgttcccaacaaca 105 ||||||||| ||||||||||| |||||||||| Sbjct: 175 gtggcacatagtcaaggatgtgcccaacaaca 206
>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete sequence Length = 134586 Score = 60.0 bits (30), Expect = 1e-05 Identities = 87/106 (82%) Strand = Plus / Plus Query: 67 ctgtcaagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctag 126 ||||||| |||||||||||||||||||| || |||| | |||| ||||||| | || | Sbjct: 44856 ctgtcaaatggcacattgtcaaggatgtcccgaacagccttcttcggcacatcattctcg 44915 Query: 127 agaacaacgaaggcaagccagtcacaaacagccgtgacacacagga 172 ||||||| ||| |||||| || || |||||| | ||||||||||| Sbjct: 44916 agaacaatgaaaacaagcctgtgaccaacagcagggacacacagga 44961
>gb|BT017567.1| Zea mays clone EL01N0426C03.c mRNA sequence Length = 1373 Score = 56.0 bits (28), Expect = 2e-04 Identities = 73/87 (83%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 14 tttgagaaaactctggngtactggcaacaagnacaagtggaatggttcattctctgtcaa 73 |||||||||| | ||| |||||||| |||| | ||||||| |||| |||| |||| || Sbjct: 467 tttgagaaaagtgtggattactggcagcaag-ataagtggactggtcaattccctgtgaa 525 Query: 74 gtggcacattgtcaaggatgttcccaa 100 ||||||||| || |||||||||||||| Sbjct: 526 gtggcacatagtgaaggatgttcccaa 552
>ref|XM_473832.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1725 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 67 ctgtcaagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctag 126 ||||||| ||||||||| |||||||||| || |||| | |||| ||||||| | || | Sbjct: 1229 ctgtcaaatggcacattatcaaggatgtcccgaacagccttcttcggcacatcattctcg 1288 Query: 127 agaacaacgaaggcaagccagtcacaaacagccgtgacacacagga 172 ||||||| ||| |||||| || || |||||| | ||||||||||| Sbjct: 1289 agaacaatgaaaacaagcctgtgaccaacagcagggacacacagga 1334
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03, complete sequence Length = 179798 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 67 ctgtcaagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctag 126 ||||||| ||||||||| |||||||||| || |||| | |||| ||||||| | || | Sbjct: 125880 ctgtcaaatggcacattatcaaggatgtcccgaacagccttcttcggcacatcattctcg 125939 Query: 127 agaacaacgaaggcaagccagtcacaaacagccgtgacacacagga 172 ||||||| ||| |||||| || || |||||| | ||||||||||| Sbjct: 125940 agaacaatgaaaacaagcctgtgaccaacagcagggacacacagga 125985
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 67 ctgtcaagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctag 126 ||||||| ||||||||| |||||||||| || |||| | |||| ||||||| | || | Sbjct: 30858359 ctgtcaaatggcacattatcaaggatgtcccgaacagccttcttcggcacatcattctcg 30858418 Query: 127 agaacaacgaaggcaagccagtcacaaacagccgtgacacacagga 172 ||||||| ||| |||||| || || |||||| | ||||||||||| Sbjct: 30858419 agaacaatgaaaacaagcctgtgaccaacagcagggacacacagga 30858464
>dbj|AK065298.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N16, full insert sequence Length = 2190 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 67 ctgtcaagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctag 126 ||||||| ||||||||| |||||||||| || |||| | |||| ||||||| | || | Sbjct: 1359 ctgtcaaatggcacattatcaaggatgtcccgaacagccttcttcggcacatcattctcg 1418 Query: 127 agaacaacgaaggcaagccagtcacaaacagccgtgacacacagga 172 ||||||| ||| |||||| || || |||||| | ||||||||||| Sbjct: 1419 agaacaatgaaaacaagcctgtgaccaacagcagggacacacagga 1464
>dbj|AK062217.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-B01, full insert sequence Length = 1105 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Plus Query: 67 ctgtcaagtggcacattgtcaaggatgttcccaacaacattctcaagcacatcgtcctag 126 ||||||| ||||||||| |||||||||| || |||| | |||| ||||||| | || | Sbjct: 260 ctgtcaaatggcacattatcaaggatgtcccgaacagccttcttcggcacatcattctcg 319 Query: 127 agaacaacgaaggcaagccagtcacaaacagccgtgacacacagga 172 ||||||| ||| |||||| || || |||||| | ||||||||||| Sbjct: 320 agaacaatgaaaacaagcctgtgaccaacagcagggacacacagga 365
>gb|AC152752.18| Medicago truncatula clone mth2-89c9, complete sequence Length = 117577 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 72 aagtggcacattgtcaaggatgttcccaacaac 104 |||||||||||||| ||||||||||| |||||| Sbjct: 70346 aagtggcacattgttaaggatgttcctaacaac 70314
>gb|AC157758.4| Medicago truncatula clone mth2-62b13, complete sequence Length = 106286 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 72 aagtggcacattgtcaaggatgttcccaacaac 104 |||||||||||||| ||||||||||| |||||| Sbjct: 4296 aagtggcacattgttaaggatgttcctaacaac 4328
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 70 tcaagtggcacattgtcaaggatgttcccaacaacat 106 |||||||||| ||||||||||||| ||||||||||| Sbjct: 19652 tcaagtggcatgttgtcaaggatgtacccaacaacat 19688 Score = 44.1 bits (22), Expect = 0.57 Identities = 91/114 (79%) Strand = Plus / Plus Query: 180 cttgagcaaggtattcagatgctcaagatattcaaagagcatgtgagcaagacctctatc 239 |||||||||||| || | ||||||||||| ||||| || || | |||||||| || ||| Sbjct: 20114 cttgagcaaggtcttgaaatgctcaagattttcaaggaccacatcagcaagacatcaatc 20173 Query: 240 ctggaagacttcaccttctacgagaaccgtcagaaattgatgcaggagaagaga 293 |||| || || || ||||||||||| || || ||||||||||||||||| Sbjct: 20174 ttggatgattttggtttttacgagaaccggcaaaagctgatgcaggagaagaga 20227
>gb|BC049392.1| Xenopus laevis hypothetical protein MGC68505, mRNA (cDNA clone IMAGE:5537337), partial cds Length = 2279 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 69 gtcaagtggcacattgtcaaggatgttcccaacaac 104 |||||||||| | |||||||||| |||||||||||| Sbjct: 1692 gtcaagtggctctttgtcaaggacgttcccaacaac 1727
>ref|XM_483734.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2650 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 67 ctgtcaagtggcacattgtcaaggatgttcc 97 |||| |||||||||||||| ||||||||||| Sbjct: 1716 ctgttaagtggcacattgtgaaggatgttcc 1746
>ref|XM_476753.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2406 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/70 (84%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 33 actggcaacaagnacaagtggaatggttcattctctgtcaagtggcacattgtcaaggat 92 |||||||||| | ||||||||| ||| | ||| |||| |||||||| ||||| |||||| Sbjct: 1467 actggcaaca-ggacaagtggactggctgtttccctgtaaagtggcatattgtgaaggat 1525 Query: 93 gttcccaaca 102 ||||| |||| Sbjct: 1526 gttccaaaca 1535
>emb|BX035467.1|CNS08ZJ3 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA6DC07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 595 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcctgcgg 573 |||||||||||||||||||||| |||| Sbjct: 407 cagcagcggccgagaagaagccggcgg 381
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 67 ctgtcaagtggcacattgtcaaggatgttcc 97 |||| |||||||||||||| ||||||||||| Sbjct: 27818849 ctgttaagtggcacattgtgaaggatgttcc 27818819
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/70 (84%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 33 actggcaacaagnacaagtggaatggttcattctctgtcaagtggcacattgtcaaggat 92 |||||||||| | ||||||||| ||| | ||| |||| |||||||| ||||| |||||| Sbjct: 3760274 actggcaaca-ggacaagtggactggctgtttccctgtaaagtggcatattgtgaaggat 3760216 Query: 93 gttcccaaca 102 ||||| |||| Sbjct: 3760215 gttccaaaca 3760206
>dbj|AP005480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0439B07 Length = 89475 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 67 ctgtcaagtggcacattgtcaaggatgttcc 97 |||| |||||||||||||| ||||||||||| Sbjct: 73306 ctgttaagtggcacattgtgaaggatgttcc 73276
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/70 (84%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 33 actggcaacaagnacaagtggaatggttcattctctgtcaagtggcacattgtcaaggat 92 |||||||||| | ||||||||| ||| | ||| |||| |||||||| ||||| |||||| Sbjct: 104625 actggcaaca-ggacaagtggactggctgtttccctgtaaagtggcatattgtgaaggat 104567 Query: 93 gttcccaaca 102 ||||| |||| Sbjct: 104566 gttccaaaca 104557
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1150_A11 Length = 142010 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 67 ctgtcaagtggcacattgtcaaggatgttcc 97 |||| |||||||||||||| ||||||||||| Sbjct: 26927 ctgttaagtggcacattgtgaaggatgttcc 26897
>dbj|AK104837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-D12, full insert sequence Length = 1345 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 67 ctgtcaagtggcacattgtcaaggatgttcc 97 |||| |||||||||||||| ||||||||||| Sbjct: 411 ctgttaagtggcacattgtgaaggatgttcc 441
>dbj|AK072392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075O16, full insert sequence Length = 2406 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/70 (84%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 33 actggcaacaagnacaagtggaatggttcattctctgtcaagtggcacattgtcaaggat 92 |||||||||| | ||||||||| ||| | ||| |||| |||||||| ||||| |||||| Sbjct: 1467 actggcaaca-ggacaagtggactggctgtttccctgtaaagtggcatattgtgaaggat 1525 Query: 93 gttcccaaca 102 ||||| |||| Sbjct: 1526 gttccaaaca 1535
>dbj|AK068463.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153A10, full insert sequence Length = 2650 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 67 ctgtcaagtggcacattgtcaaggatgttcc 97 |||| |||||||||||||| ||||||||||| Sbjct: 1716 ctgttaagtggcacattgtgaaggatgttcc 1746
>emb|BX066712.1|CNS09NN0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC50AE02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 804 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 722 cagcagcggccgagaagaagcc 701
>emb|BX058217.1|CNS09H31 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC38BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 848 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 370 cagcagcggccgagaagaagcc 349
>emb|BX055758.1|CNS09F6Q Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC34CA08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 820 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 387 cagcagcggccgagaagaagcc 366
>emb|BX050629.1|CNS09B89 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC27AH08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 491 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 364 cagcagcggccgagaagaagcc 343
>emb|BX048891.1|CNS099VZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC24BE09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 582 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 373 cagcagcggccgagaagaagcc 352
>emb|BX048575.1|CNS099N7 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC23DC08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 692 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 671 cagcagcggccgagaagaagcc 692
>emb|BX047759.1|CNS0990J Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC22BH11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 333 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 175 cagcagcggccgagaagaagcc 154
>emb|BX047713.1|CNS098Z9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC22BE10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 888 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 375 cagcagcggccgagaagaagcc 354
>emb|BX039669.1|CNS092RT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC10AC12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 765 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 398 cagcagcggccgagaagaagcc 377
>emb|BX037240.1|CNS090WC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA9CE05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 759 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 398 cagcagcggccgagaagaagcc 377
>emb|BX036580.1|CNS090E0 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA8CD11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 541 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 220 cagcagcggccgagaagaagcc 199
>emb|BX036124.1|CNS0901C Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA7DC03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 816 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 388 cagcagcggccgagaagaagcc 367
>emb|BX029509.1|CNS08UXL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA44AD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 879 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 377 cagcagcggccgagaagaagcc 356
>emb|BX028945.1|CNS08UHX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA43BA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 469 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 389 cagcagcggccgagaagaagcc 368
>emb|BX028103.1|CNS08TUJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA42AB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 459 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 382 cagcagcggccgagaagaagcc 361
>emb|BX027649.1|CNS08THX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41BE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 977 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 310 cagcagcggccgagaagaagcc 289
>emb|BX027278.1|CNS08T7M Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA40DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 912 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 382 cagcagcggccgagaagaagcc 361
>emb|BX026134.1|CNS08SBU Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA4BC02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 651 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 302 cagcagcggccgagaagaagcc 281
>emb|BX020909.1|CNS08OAP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA30DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 711 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 353 cagcagcggccgagaagaagcc 332
>emb|BX019905.1|CNS08NIT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA3BD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1030 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 391 cagcagcggccgagaagaagcc 370
>emb|BX017103.1|CNS08LCZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA25CG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 574 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 374 cagcagcggccgagaagaagcc 353
>emb|BX016863.1|CNS08L6B Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA25BD06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 657 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 325 cagcagcggccgagaagaagcc 304
>emb|BX010707.1|CNS08GFB Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA17AG06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 749 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 371 cagcagcggccgagaagaagcc 350
>emb|BX010159.1|CNS08G03 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA16BD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 524 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 390 cagcagcggccgagaagaagcc 369
>emb|BX010158.1|CNS08G02 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA16BD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 731 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 648 cagcagcggccgagaagaagcc 669
>emb|BX009177.1|CNS08F8T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA14DG07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 901 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 389 cagcagcggccgagaagaagcc 368
>emb|BX007586.1|CNS08E0M Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA12CE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 505 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 547 cagcagcggccgagaagaagcc 568 |||||||||||||||||||||| Sbjct: 383 cagcagcggccgagaagaagcc 362
>ref|NM_104425.1| Arabidopsis thaliana unknown protein AT1G55500 mRNA, complete cds Length = 2484 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 70 tcaagtggcacattgtcaaggatgttcccaaca 102 |||||||||| ||| | |||||||||||||||| Sbjct: 1894 tcaagtggcatattctgaaggatgttcccaaca 1926
>gb|AC119853.9| Mus musculus chromosome 16, clone RP23-231E23, complete sequence Length = 236274 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 472 tgaaggttccggcagagaaag 492 ||||||||||||||||||||| Sbjct: 107720 tgaaggttccggcagagaaag 107700
>gb|AC005223.1| Arabidopsis thaliana chromosome I BAC T5A14, complete sequence Length = 87967 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 70 tcaagtggcacattgtcaaggatgttcccaaca 102 |||||||||| ||| | |||||||||||||||| Sbjct: 48993 tcaagtggcatattctgaaggatgttcccaaca 48961
>gb|AC143339.12| Medicago truncatula clone mth2-20g20, complete sequence Length = 99993 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 182 tgagcaaggtattcagatgctcaag 206 |||| |||||||||||||||||||| Sbjct: 44149 tgaggaaggtattcagatgctcaag 44125
>emb|AL031847.17|HS120G22 Human DNA sequence from clone RP1-120G22 on chromosome 1p36.21-36.33 Contains the 5' end of the CHD5 gene for chromodomain helicase DNA binding protein 5, the RPL22 gene for ribosomal protein L22, eight novel genes, the ICMT gene for isoprenylcysteine carboxyl methyltransferase, possible ortholog of rodent transcription factor HES-3, the 3' end of the gene for brain acyl-CoA hydrolase (BACH) and seven CpG islands, complete sequence Length = 166518 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 407 gaaacaacaggatgccatcaa 427 ||||||||||||||||||||| Sbjct: 94298 gaaacaacaggatgccatcaa 94318
>ref|XM_695555.1| PREDICTED: Danio rerio similar to Farnesyl-diphosphate farnesyltransferase (Squalene synthetase) (SQS) (SS) (FPP:FPP farnesyltransferase) (LOC571911), partial mRNA Length = 752 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 496 cccctgctgctggtcctccag 516 ||||||||||||||||||||| Sbjct: 312 cccctgctgctggtcctccag 292
>gb|AY050425.1| Arabidopsis thaliana At1g55500/T5A14_10 mRNA, complete cds Length = 2484 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 70 tcaagtggcacattgtcaaggatgttcccaaca 102 |||||||||| ||| | |||||||||||||||| Sbjct: 1894 tcaagtggcatattctgaaggatgttcccaaca 1926
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 499 ctgctgctggtcctccagccg 519 ||||||||||||||||||||| Sbjct: 616629 ctgctgctggtcctccagccg 616609
>emb|BX813632.1|CNS0AC7R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB29ZF03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2057 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 70 tcaagtggcacattgtcaaggatgttcccaaca 102 |||||||||| ||| | |||||||||||||||| Sbjct: 1590 tcaagtggcatattctgaaggatgttcccaaca 1622
>gb|BT002240.1| Arabidopsis thaliana At1g55500/T5A14_10 mRNA, complete cds Length = 1650 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 70 tcaagtggcacattgtcaaggatgttcccaaca 102 |||||||||| ||| | |||||||||||||||| Sbjct: 1343 tcaagtggcatattctgaaggatgttcccaaca 1375
>ref|NM_208906.1| Eremothecium gossypii ACR151Wp (ACR151W), mRNA Length = 2649 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 499 ctgctgctggtcctccagccg 519 ||||||||||||||||||||| Sbjct: 285 ctgctgctggtcctccagccg 265
>gb|AY007505.3| Streptococcus mitis phage SM1,complete genome Length = 34692 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 aatgggaagccgaagtctcc 445 |||||||||||||||||||| Sbjct: 12017 aatgggaagccgaagtctcc 12036
>gb|BC064856.1| Xenopus tropicalis YTH domain family, member 1, mRNA (cDNA clone MGC:75606 IMAGE:5379253), complete cds Length = 2307 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 69 gtcaagtggcacattgtcaaggatgttcccaacaac 104 |||||||||| | | |||||||| |||||||||||| Sbjct: 1643 gtcaagtggctcttcgtcaaggacgttcccaacaac 1678
>gb|AC121830.3| Mus musculus BAC clone RP24-63N24 from chromosome 7, complete sequence Length = 211478 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cctggaagacttcaccttct 258 |||||||||||||||||||| Sbjct: 113208 cctggaagacttcaccttct 113227
>gb|BC045277.1| Danio rerio HuG, mRNA (cDNA clone MGC:55217 IMAGE:3817416), complete cds Length = 2085 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gtattcagatgctcaagata 209 |||||||||||||||||||| Sbjct: 1836 gtattcagatgctcaagata 1855
>emb|AL357115.24| Human DNA sequence from clone RP11-102P23 on chromosome Xq13.3-21.1 Contains the 5' end of the NSBP1 gene for nucleosomal binding protein 1 and the SH3BGRL gene for SH3 domain binding glutamic acid-rich protein like, complete sequence Length = 164012 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 177 aaccttgagcaaggtattcagatgctca 204 ||||||| |||||||||||| ||||||| Sbjct: 68385 aaccttgggcaaggtattcaaatgctca 68358
>emb|BX013132.1|CNS08IAO Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA2DB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 909 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 gcagcggccgagaagaagcc 568 |||||||||||||||||||| Sbjct: 396 gcagcggccgagaagaagcc 377
>ref|NM_204061.1| Xenopus tropicalis YTH domain family, member 1 (ythdf1), mRNA Length = 2307 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 69 gtcaagtggcacattgtcaaggatgttcccaacaac 104 |||||||||| | | |||||||| |||||||||||| Sbjct: 1643 gtcaagtggctcttcgtcaaggacgttcccaacaac 1678
>emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1 Length = 347582 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 atgctcaagatattcaaagagcatgtga 225 |||||||| |||||||||||||| |||| Sbjct: 214552 atgctcaaaatattcaaagagcacgtga 214525
>emb|CR550302.15| Zebrafish DNA sequence from clone DKEY-145I3 in linkage group 11, complete sequence Length = 202610 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gtattcagatgctcaagata 209 |||||||||||||||||||| Sbjct: 48818 gtattcagatgctcaagata 48799
>emb|BX000695.5| Mouse DNA sequence from clone RP23-458E19 on chromosome 11, complete sequence Length = 28710 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tggttcattctctgtcaagt 75 |||||||||||||||||||| Sbjct: 19905 tggttcattctctgtcaagt 19886
>emb|CR761754.1| Xenopus tropicalis finished cDNA, clone TGas119a18 Length = 757 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 69 gtcaagtggcacattgtcaaggatgttcccaacaac 104 |||||||||| | | |||||||| |||||||||||| Sbjct: 158 gtcaagtggctcttcgtcaaggacgttcccaacaac 193
>gb|AC139168.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1364E02, complete sequence Length = 126027 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggcagagaaagccgcccct 500 |||||||||||||||||||| Sbjct: 6862 cggcagagaaagccgcccct 6843
>gb|AC135208.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1364E02, complete sequence Length = 112265 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 cggcagagaaagccgcccct 500 |||||||||||||||||||| Sbjct: 59127 cggcagagaaagccgcccct 59108
>gb|AC084581.1|CBRG40L08 Caenorhabditis briggsae cosmid G40L08, complete sequence Length = 44903 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 ggagaaacaacaggaaccgaaggt 379 ||||||||||||||||| |||||| Sbjct: 17218 ggagaaacaacaggaactgaaggt 17195
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 570 gcggtgaccgagaagaagcc 589 |||||||||||||||||||| Sbjct: 1176339 gcggtgaccgagaagaagcc 1176320
>dbj|AB009048.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15E6 Length = 71736 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 aaaacaacagcagatccaaa 315 |||||||||||||||||||| Sbjct: 27287 aaaacaacagcagatccaaa 27306
>emb|BX005279.12| Mouse DNA sequence from clone RP23-321B15 on chromosome X, complete sequence Length = 222627 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gagaataaaacaacagcaga 309 |||||||||||||||||||| Sbjct: 24497 gagaataaaacaacagcaga 24516
>gb|AC125100.4| Mus musculus BAC clone RP24-206N14 from 9, complete sequence Length = 169501 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 236 tatcctggaagacttcaccttcta 259 ||||||||||||||||| |||||| Sbjct: 5907 tatcctggaagacttcaacttcta 5930
>gb|AC138313.4| Mus musculus BAC clone RP23-243P9 from 9, complete sequence Length = 195883 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 tatcctggaagacttcaccttcta 259 ||||||||||||||||| |||||| Sbjct: 43291 tatcctggaagacttcaacttcta 43268 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,187,511 Number of Sequences: 3902068 Number of extensions: 5187511 Number of successful extensions: 100099 Number of sequences better than 10.0: 102 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99632 Number of HSP's gapped (non-prelim): 443 length of query: 653 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 630 effective length of database: 17,143,297,704 effective search space: 10800277553520 effective search space used: 10800277553520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
