>EMSY_BRARE (Q7ZUV7) Protein EMSY|
          Length = 1173

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
 Frame = +3

Query: 165 KTVELPAQGGERVTISLAAPANAY-RQMGPLKIAARSKGFSPGEPMCLTNHVSGEISKLL 341
           KT+ LP  GG +++  + + AN+    M P+KI               TN  + ++  + 
Sbjct: 232 KTITLPVSGGPKISNLMQSIANSLPPHMSPVKITFTKPSTQ------TTNTTTQKVIIVT 285

Query: 342 RVPSKNAGPLFLSPYLVVGAVALLASGDAVSA 437
             PS N  P  LS      AV+ L S  A++A
Sbjct: 286 TSPSSNFVPNILSKSHNYAAVSKLVSSAALTA 317

>PQQB_RHIME (Q9EXV1) Coenzyme PQQ synthesis protein B (Pyrroloquinoline quinone|
           biosynthesis protein B)
          Length = 303

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 31/111 (27%), Positives = 46/111 (41%)
 Frame = +3

Query: 123 RTPSGTARTHRFATKTVELPAQGGERVTISLAAPANAYRQMGPLKIAARSKGFSPGEPMC 302
           R P+   R    ++  V L    GE  T+  A+P    +      +  R    SP E + 
Sbjct: 34  RDPASGLRPQTQSSLAVSLD---GESWTVFNASPDIRQQVQDNCPLQPRRLRHSPIESVV 90

Query: 303 LTNHVSGEISKLLRVPSKNAGPLFLSPYLVVGAVALLASGDAVSAFIDPSL 455
           LTN     ++ LL +  K A  LF +     GAV  + S + V   +DP L
Sbjct: 91  LTNGDIDHLAGLLVLREKQAFTLFST-----GAVGRIVSDNPVFQVLDPEL 136

>GH33_ORYSA (Q5NAZ7) Probable indole-3-acetic acid-amido synthetase GH3.3 (EC|
           6.3.2.-) (Auxin-responsive GH3-like protein 3) (OsGH3-3)
          Length = 462

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 18/54 (33%), Positives = 29/54 (53%)
 Frame = +3

Query: 180 PAQGGERVTISLAAPANAYRQMGPLKIAARSKGFSPGEPMCLTNHVSGEISKLL 341
           P    ER T ++  P  AY +  PLK  A   G++  EP+ LT   +GE+ +++
Sbjct: 349 PGTPPERATFTVL-PDIAYFEFIPLKPVAGDGGYAEAEPVGLTEVAAGELYEVV 401

>Y903_MYCBO (P64736) Hypothetical protein Mb0903c|
          Length = 91

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = +3

Query: 315 VSGEISKLLRVPSKNAGPLFLSPYLVVGAVALLASGDAVSAFIDPSLP--RLITATVIAS 488
           +S E S++   P      L + P + VGA+A L +  AV+AF+ P L   R +T   +A+
Sbjct: 1   MSVENSQIREPPPLPPVLLEVWPVIAVGALAWLVA--AVAAFVVPGLASWRPVTVAGLAT 58

Query: 489 AAVGTTL 509
             +GTT+
Sbjct: 59  GLLGTTI 65

>Y879_MYCTU (P64735) Hypothetical protein Rv0879c/MT0902|
          Length = 91

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = +3

Query: 315 VSGEISKLLRVPSKNAGPLFLSPYLVVGAVALLASGDAVSAFIDPSLP--RLITATVIAS 488
           +S E S++   P      L + P + VGA+A L +  AV+AF+ P L   R +T   +A+
Sbjct: 1   MSVENSQIREPPPLPPVLLEVWPVIAVGALAWLVA--AVAAFVVPGLASWRPVTVAGLAT 58

Query: 489 AAVGTTL 509
             +GTT+
Sbjct: 59  GLLGTTI 65

>TENS1_BOVIN (Q9GLM4) Tensin-1|
          Length = 1715

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 42/136 (30%), Positives = 57/136 (41%), Gaps = 15/136 (11%)
 Frame = +3

Query: 99   AAVHSIVIRTPSGTARTHRFATKTVELPAQGGERVTISLAAPAN---AYRQ-MGPL---- 254
            A VH++     S  AR     T T   P  G   V  SLAAP++   ++RQ MGPL    
Sbjct: 1150 AGVHTV---PGSPQARHRTVGTNTPPSPGFGRRAVNPSLAAPSSPSLSHRQVMGPLGTGF 1206

Query: 255  -----KIAARSKGFSPGEPMCLTNHVSGEISKLL-RVPSKNAGP-LFLSPYLVVGAVALL 413
                      S   +PG P  L  H   ++S L   V ++   P L   P    G +A  
Sbjct: 1207 HGNTGSSPQSSAATTPGSP-SLGRHPGAQVSNLHGNVVTRPGSPSLGRHPGAHQGTLASN 1265

Query: 414  ASGDAVSAFIDPSLPR 461
               +AV++   PSL R
Sbjct: 1266 LHSNAVASPGSPSLGR 1281

>FPG_PSEAE (Q9L7T2) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 269

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
 Frame = +3

Query: 114 IVIRTPSGTARTHRFATKTVEL-----PAQGGERVTISLAAPANAYRQMGPLKIAARSKG 278
           +++   +GT  +H   + ++ L     PA   E V I LA+   A R   P +  A    
Sbjct: 59  LLLGAEAGTLISHLGMSGSLRLVESGTPASRHEHVDIELAS-GMALRYTDPRRFGAMLWS 117

Query: 279 FSPGE--------PMCLTNHVSGE-ISKLLRVPSKNAGPLFLSPYLVVGAVALLASGDAV 431
            +P E        P  LT+  +G+ + +L R  S    P  +   +VVG   + AS    
Sbjct: 118 LAPLEHELLRNLGPEPLTDAFAGQRLFELSRGRSMAVKPFIMDNAVVVGVGNIYASEALF 177

Query: 432 SAFIDPSLP 458
           +A IDP  P
Sbjct: 178 AAGIDPRKP 186

>GUNA_PSEFL (P10476) Endoglucanase A precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase) (EGA)
          Length = 962

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 21/82 (25%), Positives = 37/82 (45%)
 Frame = +3

Query: 216 AAPANAYRQMGPLKIAARSKGFSPGEPMCLTNHVSGEISKLLRVPSKNAGPLFLSPYLVV 395
           ++ + A  +   L+++A + GF  G  +C T H++G         S   G      + V+
Sbjct: 716 SSSSQAANRSPTLQLSANATGFEGGSMVCCTLHING-------AASDPDGDNLTYSWQVI 768

Query: 396 GAVALLASGDAVSAFIDPSLPR 461
               ++ASG + SA I  S  R
Sbjct: 769 SGNTVVASGSSSSASIHVSNQR 790

>TRX_DROVI (Q24742) Protein trithorax|
          Length = 3828

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 5/109 (4%)
 Frame = +3

Query: 84   KDDLPAAVHSIVIRTPSGTARTHRFATKTVELPAQGGERVTISLAAPANAYRQ----MGP 251
            KD+ PA+  + V    S T+ T   AT + +L        +   A P N  RQ     GP
Sbjct: 993  KDEQPASTTTTVSAASSSTSHTSSAATNSSQLETTEAANAS---AVPDNLKRQRIDLKGP 1049

Query: 252  -LKIAARSKGFSPGEPMCLTNHVSGEISKLLRVPSKNAGPLFLSPYLVV 395
             +K   RS     G+P+        E++     P+        SP +++
Sbjct: 1050 RVKHVCRSASIVLGQPLATFGDEEEELAAAEAGPAPTTTTTTTSPEVII 1098

>CIC_MOUSE (Q924A2) Protein capicua homolog|
          Length = 1606

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 360  AGPLFLSPYLVVGAVALLASGD-AVSAFIDPSLPRLITAT 476
            +GP F+ P L  G   LLA G   VS    P LP   TA+
Sbjct: 1046 SGPAFVQPLLSAGQAPLLAPGQVGVSPVPSPQLPPACTAS 1085

>ASNS_CHICK (Q5ZJU3) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)|
           (Glutamine-dependent asparagine synthetase)
          Length = 560

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = +3

Query: 24  EEVSMDISAFEKALQFINVMKDDLPAAVHSIVIRTPSGTARTHRFATKTVELPAQ 188
           EE + +     K L   +V++ D   A H + +R P      HRF +  + LPA+
Sbjct: 383 EEAAEESERLLKELYLFDVLRADRTTAAHGLELRVP---FLDHRFTSYYLSLPAE 434


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,050,929
Number of Sequences: 219361
Number of extensions: 1442261
Number of successful extensions: 3980
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3971
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)