ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal30i02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ534445.1|HVU534445 Hordeum vulgare mRNA for hexose transporter (stp1 gene) Length = 2614 Score = 1209 bits (610), Expect = 0.0 Identities = 610/610 (100%) Strand = Plus / Plus Query: 1 tagcttggaagtggactgagagagaaggtgcagatgggcaaaaagaaggtggcttccagc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1344 tagcttggaagtggactgagagagaaggtgcagatgggcaaaaagaaggtggcttccagc 1403 Query: 61 gtatttacttgcatgaggagggtgtgtcaggtgatcggagaggctctatattgtctatgc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1404 gtatttacttgcatgaggagggtgtgtcaggtgatcggagaggctctatattgtctatgc 1463 Query: 121 caggaggtgatattcctcctggtggtgagtatatccaggcagccgctctagtgagccaac 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1464 caggaggtgatattcctcctggtggtgagtatatccaggcagccgctctagtgagccaac 1523 Query: 181 ctgctctttactcgaaggacctgatagagcagcagcttgctggtccagccatggtacatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1524 ctgctctttactcgaaggacctgatagagcagcagcttgctggtccagccatggtacatc 1583 Query: 241 catccgaggcagttgccaagggtacaaagtgggcagaactatttgaacctggagtgaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1584 catccgaggcagttgccaagggtacaaagtgggcagaactatttgaacctggagtgaagc 1643 Query: 301 atgcactgtttgttggcattggattacagatcctgcagcagtttgcgggtatcaacggag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1644 atgcactgtttgttggcattggattacagatcctgcagcagtttgcgggtatcaacggag 1703 Query: 361 tcctgtattacacgcctcagatacttgagcaagcaggtgttgggattcttctatcaaaca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1704 tcctgtattacacgcctcagatacttgagcaagcaggtgttgggattcttctatcaaaca 1763 Query: 421 ttggactaagctcttcctctgcatctattcttattagtgccttgacaaccttgctgatgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1764 ttggactaagctcttcctctgcatctattcttattagtgccttgacaaccttgctgatgc 1823 Query: 481 ttcccagcattggcatcgccatgagactcatggatatgtcaggaagaaggtttcttctcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1824 ttcccagcattggcatcgccatgagactcatggatatgtcaggaagaaggtttcttctcc 1883 Query: 541 tctcaacaatccctgtcttgatagtggcactagctatcttggttttggtgaatgttctgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1884 tctcaacaatccctgtcttgatagtggcactagctatcttggttttggtgaatgttctgg 1943 Query: 601 atgtgggaac 610 |||||||||| Sbjct: 1944 atgtgggaac 1953
>emb|AJ534446.1|HVU534446 Hordeum vulgare mRNA for sugar transporter (stp2 gene) Length = 2516 Score = 924 bits (466), Expect = 0.0 Identities = 478/482 (99%) Strand = Plus / Plus Query: 1 tagcttggaagtggactgagagagaaggtgcagatgggcaaaaagaaggtggcttccagc 60 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 1281 tagcttggaagtggactgagagagaaggtgcagatgggcgaaaagaaggtggcgcccagc 1340 Query: 61 gtatttacttgcatgaggagggtgtgtcaggtgatcggagaggctctatattgtctatgc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1341 gtatttacttgcatgaggagggtgtgtcaggtgatcggagaggctctatattgtctatgc 1400 Query: 121 caggaggtgatattcctcctggtggtgagtatatccaggcagccgctctagtgagccaac 180 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1401 caggaggtgatattcctcctggtggtgagtatatccaggcagccgctcttgtgagccaac 1460 Query: 181 ctgctctttactcgaaggacctgatagagcagcagcttgctggtccagccatggtacatc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1461 ctgctctttactcgaaggacctgatagagcagcagcttgctggtccagccatggtacatc 1520 Query: 241 catccgaggcagttgccaagggtacaaagtgggcagaactatttgaacctggagtgaagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1521 catccgaggcagttgccaagggtacaaagtgggcagaactatttgaacctggagtgaagc 1580 Query: 301 atgcactgtttgttggcattggattacagatcctgcagcagtttgcgggtatcaacggag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1581 atgcactgtttgttggcattggattacagatcctgcagcagtttgcgggtatcaacggag 1640 Query: 361 tcctgtattacacgcctcagatacttgagcaagcaggtgttgggattcttctatcaaaca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1641 tcctgtattacacgcctcagatacttgagcaagcaggtgttgggattcttctatcaaaca 1700 Query: 421 ttggactaagctcttcctctgcatctattcttattagtgccttgacaaccttgctgatgc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1701 ttggactaagctcttcctctgcatctattcttattagtgccttgacaaccttgctgatgc 1760 Query: 481 tt 482 || Sbjct: 1761 tt 1762 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 572 agctatcttggttttggtgaatgttctggatgtgggaac 610 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1852 agctatcttggttttggtgaatgttctggatgtgggaac 1890
>ref|NM_197573.1| Oryza sativa (japonica cultivar-group) putative sugar transporter (OSJNBb0064P21.3), mRNA Length = 2438 Score = 549 bits (277), Expect = e-153 Identities = 523/605 (86%) Strand = Plus / Plus Query: 3 gcttggaagtggactgagagagaaggtgcagatgggcaaaaagaaggtggcttccagcgt 62 |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 1434 gcttggaaatggactgagagagaaggtgcagatggcgaaaaagaaggtggcttccaacgt 1493 Query: 63 atttacttgcatgaggagggtgtgtcaggtgatcggagaggctctatattgtctatgcca 122 || ||||||||||| ||||||||| |||||||||| || ||||||||| |||| |||| Sbjct: 1494 atctacttgcatgaagagggtgtgacaggtgatcgcaggggctctatactgtcattgcct 1553 Query: 123 ggaggtgatattcctcctggtggtgagtatatccaggcagccgctctagtgagccaacct 182 ||||||||| |||||||||||||||||| |||||||||| ||||| || ||||||||| Sbjct: 1554 ggaggtgatgttcctcctggtggtgagttcgtccaggcagctgctcttgtcagccaacct 1613 Query: 183 gctctttactcgaaggacctgatagagcagcagcttgctggtccagccatggtacatcca 242 ||||||||||| ||||| |||| ||||| | |||||||| || || ||||| |||||| Sbjct: 1614 gctctttactctaaggaattgatggagcaacgccttgctggccctgctatggtgcatcca 1673 Query: 243 tccgaggcagttgccaagggtacaaagtgggcagaactatttgaacctggagtgaagcat 302 || |||||||||| || ||| |||| |||||||| |||| |||||||||||||||||| Sbjct: 1674 tctcaggcagttgctaaaggtccaaaatgggcagacttattcgaacctggagtgaagcat 1733 Query: 303 gcactgtttgttggcattggattacagatcctgcagcagtttgcgggtatcaacggagtc 362 || |||||||||||||| || |||| |||||||| |||||||| || || || ||||| Sbjct: 1734 gctctgtttgttggcatagggatacaaatcctgcaacagtttgctggcattaatggagtt 1793 Query: 363 ctgtattacacgcctcagatacttgagcaagcaggtgttgggattcttctatcaaacatt 422 ||||| ||||| || || || ||||||||||| |||||||| ||||||| |||||||| Sbjct: 1794 ctgtactacactccacaaattcttgagcaagctggtgttggtgttcttcttgcaaacatt 1853 Query: 423 ggactaagctcttcctctgcatctattcttattagtgccttgacaaccttgctgatgctt 482 ||||| ||||| || |||||||||||||||||||| | |||||||||||||||||||| Sbjct: 1854 ggacttagctcctcatctgcatctattcttattagcggactgacaaccttgctgatgctt 1913 Query: 483 cccagcattggcatcgccatgagactcatggatatgtcaggaagaaggtttcttctcctc 542 ||||||||||| || || ||||| |||||||||||||| |||||||||||||||||||| Sbjct: 1914 cccagcattggtattgctatgaggctcatggatatgtctggaagaaggtttcttctcctt 1973 Query: 543 tcaacaatccctgtcttgatagtggcactagctatcttggttttggtgaatgttctggat 602 ||||||||||| || ||||||| ||||||||||||||| || |||| ||| |||||||| Sbjct: 1974 gcaacaatccctatcctgatagtagcactagctatcttgattctggtcaatattctggat 2033 Query: 603 gtggg 607 ||||| Sbjct: 2034 gtggg 2038
>dbj|AK067391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106M11, full insert sequence Length = 1564 Score = 549 bits (277), Expect = e-153 Identities = 523/605 (86%) Strand = Plus / Plus Query: 3 gcttggaagtggactgagagagaaggtgcagatgggcaaaaagaaggtggcttccagcgt 62 |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 275 gcttggaaatggactgagagagaaggtgcagatggcgaaaaagaaggtggcttccaacgt 334 Query: 63 atttacttgcatgaggagggtgtgtcaggtgatcggagaggctctatattgtctatgcca 122 || ||||||||||| ||||||||| |||||||||| || ||||||||| |||| |||| Sbjct: 335 atctacttgcatgaagagggtgtgacaggtgatcgcaggggctctatactgtcattgcct 394 Query: 123 ggaggtgatattcctcctggtggtgagtatatccaggcagccgctctagtgagccaacct 182 ||||||||| |||||||||||||||||| |||||||||| ||||| || ||||||||| Sbjct: 395 ggaggtgatgttcctcctggtggtgagttcgtccaggcagctgctcttgtcagccaacct 454 Query: 183 gctctttactcgaaggacctgatagagcagcagcttgctggtccagccatggtacatcca 242 ||||||||||| ||||| |||| ||||| | |||||||| || || ||||| |||||| Sbjct: 455 gctctttactctaaggaattgatggagcaacgccttgctggccctgctatggtgcatcca 514 Query: 243 tccgaggcagttgccaagggtacaaagtgggcagaactatttgaacctggagtgaagcat 302 || |||||||||| || ||| |||| |||||||| |||| |||||||||||||||||| Sbjct: 515 tctcaggcagttgctaaaggtccaaaatgggcagacttattcgaacctggagtgaagcat 574 Query: 303 gcactgtttgttggcattggattacagatcctgcagcagtttgcgggtatcaacggagtc 362 || |||||||||||||| || |||| |||||||| |||||||| || || || ||||| Sbjct: 575 gctctgtttgttggcatagggatacaaatcctgcaacagtttgctggcattaatggagtt 634 Query: 363 ctgtattacacgcctcagatacttgagcaagcaggtgttgggattcttctatcaaacatt 422 ||||| ||||| || || || ||||||||||| |||||||| ||||||| |||||||| Sbjct: 635 ctgtactacactccacaaattcttgagcaagctggtgttggtgttcttcttgcaaacatt 694 Query: 423 ggactaagctcttcctctgcatctattcttattagtgccttgacaaccttgctgatgctt 482 ||||| ||||| || |||||||||||||||||||| | |||||||||||||||||||| Sbjct: 695 ggacttagctcctcatctgcatctattcttattagcggactgacaaccttgctgatgctt 754 Query: 483 cccagcattggcatcgccatgagactcatggatatgtcaggaagaaggtttcttctcctc 542 ||||||||||| || || ||||| |||||||||||||| |||||||||||||||||||| Sbjct: 755 cccagcattggtattgctatgaggctcatggatatgtctggaagaaggtttcttctcctt 814 Query: 543 tcaacaatccctgtcttgatagtggcactagctatcttggttttggtgaatgttctggat 602 ||||||||||| || ||||||| ||||||||||||||| || |||| ||| |||||||| Sbjct: 815 gcaacaatccctatcctgatagtagcactagctatcttgattctggtcaatattctggat 874 Query: 603 gtggg 607 ||||| Sbjct: 875 gtggg 879
>dbj|AK065191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E10, full insert sequence Length = 2368 Score = 549 bits (277), Expect = e-153 Identities = 523/605 (86%) Strand = Plus / Plus Query: 3 gcttggaagtggactgagagagaaggtgcagatgggcaaaaagaaggtggcttccagcgt 62 |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 1102 gcttggaaatggactgagagagaaggtgcagatggcgaaaaagaaggtggcttccaacgt 1161 Query: 63 atttacttgcatgaggagggtgtgtcaggtgatcggagaggctctatattgtctatgcca 122 || ||||||||||| ||||||||| |||||||||| || ||||||||| |||| |||| Sbjct: 1162 atctacttgcatgaagagggtgtgacaggtgatcgcaggggctctatactgtcattgcct 1221 Query: 123 ggaggtgatattcctcctggtggtgagtatatccaggcagccgctctagtgagccaacct 182 ||||||||| |||||||||||||||||| |||||||||| ||||| || ||||||||| Sbjct: 1222 ggaggtgatgttcctcctggtggtgagttcgtccaggcagctgctcttgtcagccaacct 1281 Query: 183 gctctttactcgaaggacctgatagagcagcagcttgctggtccagccatggtacatcca 242 ||||||||||| ||||| |||| ||||| | |||||||| || || ||||| |||||| Sbjct: 1282 gctctttactctaaggaattgatggagcaacgccttgctggccctgctatggtgcatcca 1341 Query: 243 tccgaggcagttgccaagggtacaaagtgggcagaactatttgaacctggagtgaagcat 302 || |||||||||| || ||| |||| |||||||| |||| |||||||||||||||||| Sbjct: 1342 tctcaggcagttgctaaaggtccaaaatgggcagacttattcgaacctggagtgaagcat 1401 Query: 303 gcactgtttgttggcattggattacagatcctgcagcagtttgcgggtatcaacggagtc 362 || |||||||||||||| || |||| |||||||| |||||||| || || || ||||| Sbjct: 1402 gctctgtttgttggcatagggatacaaatcctgcaacagtttgctggcattaatggagtt 1461 Query: 363 ctgtattacacgcctcagatacttgagcaagcaggtgttgggattcttctatcaaacatt 422 ||||| ||||| || || || ||||||||||| |||||||| ||||||| |||||||| Sbjct: 1462 ctgtactacactccacaaattcttgagcaagctggtgttggtgttcttcttgcaaacatt 1521 Query: 423 ggactaagctcttcctctgcatctattcttattagtgccttgacaaccttgctgatgctt 482 ||||| ||||| || |||||||||||||||||||| | |||||||||||||||||||| Sbjct: 1522 ggacttagctcctcatctgcatctattcttattagcggactgacaaccttgctgatgctt 1581 Query: 483 cccagcattggcatcgccatgagactcatggatatgtcaggaagaaggtttcttctcctc 542 ||||||||||| || || ||||| |||||||||||||| |||||||||||||||||||| Sbjct: 1582 cccagcattggtattgctatgaggctcatggatatgtctggaagaaggtttcttctcctt 1641 Query: 543 tcaacaatccctgtcttgatagtggcactagctatcttggttttggtgaatgttctggat 602 ||||||||||| || ||||||| ||||||||||||||| || |||| ||| |||||||| Sbjct: 1642 gcaacaatccctatcctgatagtagcactagctatcttgattctggtcaatattctggat 1701 Query: 603 gtggg 607 ||||| Sbjct: 1702 gtggg 1706
>dbj|AK102640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033100A10, full insert sequence Length = 2800 Score = 533 bits (269), Expect = e-148 Identities = 521/605 (86%) Strand = Plus / Plus Query: 3 gcttggaagtggactgagagagaaggtgcagatgggcaaaaagaaggtggcttccagcgt 62 |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 1465 gcttggaaatggactgagagagaaggtgcagatggcgaaaaagaaggtggcttccaacgt 1524 Query: 63 atttacttgcatgaggagggtgtgtcaggtgatcggagaggctctatattgtctatgcca 122 || ||||||||||| ||||||||| |||||||||| || ||||||||| |||| |||| Sbjct: 1525 atctacttgcatgaagagggtgtgacaggtgatcgcaggggctctatactgtcattgcct 1584 Query: 123 ggaggtgatattcctcctggtggtgagtatatccaggcagccgctctagtgagccaacct 182 ||||||||| |||||||||||||||||| |||||||||| ||||| || ||||||||| Sbjct: 1585 ggaggtgatgttcctcctggtggtgagttcgtccaggcagctgctcttgtcagccaacct 1644 Query: 183 gctctttactcgaaggacctgatagagcagcagcttgctggtccagccatggtacatcca 242 ||||||||||| ||||| |||| |||| | |||||||| || || ||||| |||||| Sbjct: 1645 gctctttactctaaggaattgatgaagcaacgccttgctggccctgctatggtgcatcca 1704 Query: 243 tccgaggcagttgccaagggtacaaagtgggcagaactatttgaacctggagtgaagcat 302 || |||||||||| || ||| |||| |||||||| |||| |||||||||||||||||| Sbjct: 1705 tctcaggcagttgctaaaggtccaaaatgggcagacttattcgaacctggagtgaagcat 1764 Query: 303 gcactgtttgttggcattggattacagatcctgcagcagtttgcgggtatcaacggagtc 362 || |||||||||||||| || |||| |||||||| |||||||| || || || ||||| Sbjct: 1765 gctctgtttgttggcatagggatacaaatcctgcaacagtttgctggcattaatggagtt 1824 Query: 363 ctgtattacacgcctcagatacttgagcaagcaggtgttgggattcttctatcaaacatt 422 ||||| ||||| || || || ||||||||||| |||||||| ||||||| |||||||| Sbjct: 1825 ctgtactacactccacaaattcttgagcaagctggtgttggtgttcttcttgcaaacatt 1884 Query: 423 ggactaagctcttcctctgcatctattcttattagtgccttgacaaccttgctgatgctt 482 ||||| ||||| || |||||||||||||||||||| | ||||||||||||||| |||| Sbjct: 1885 ggacttagctcctcatctgcatctattcttattagcggactgacaaccttgctgacgctt 1944 Query: 483 cccagcattggcatcgccatgagactcatggatatgtcaggaagaaggtttcttctcctc 542 ||||||||||| || || ||||| |||||||||||||| |||||||||||||||||||| Sbjct: 1945 cccagcattggtattgctatgaggctcatggatatgtctggaagaaggtttcttctcctt 2004 Query: 543 tcaacaatccctgtcttgatagtggcactagctatcttggttttggtgaatgttctggat 602 ||||||||||| || ||||||| ||||||||||||||| || |||| ||| |||||||| Sbjct: 2005 gcaacaatccctatcctgatagtagcactagctatcttgattctggtcaatattctggat 2064 Query: 603 gtggg 607 ||||| Sbjct: 2065 gtggg 2069
>gb|AC073166.7| Oryza sativa chromosome 10 BAC OSJNBb0064P21 genomic sequence, complete sequence Length = 142114 Score = 307 bits (155), Expect = 2e-80 Identities = 290/335 (86%) Strand = Plus / Plus Query: 3 gcttggaagtggactgagagagaaggtgcagatgggcaaaaagaaggtggcttccagcgt 62 |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 36591 gcttggaaatggactgagagagaaggtgcagatggcgaaaaagaaggtggcttccaacgt 36650 Query: 63 atttacttgcatgaggagggtgtgtcaggtgatcggagaggctctatattgtctatgcca 122 || ||||||||||| ||||||||| |||||||||| || ||||||||| |||| |||| Sbjct: 36651 atctacttgcatgaagagggtgtgacaggtgatcgcaggggctctatactgtcattgcct 36710 Query: 123 ggaggtgatattcctcctggtggtgagtatatccaggcagccgctctagtgagccaacct 182 ||||||||| |||||||||||||||||| |||||||||| ||||| || ||||||||| Sbjct: 36711 ggaggtgatgttcctcctggtggtgagttcgtccaggcagctgctcttgtcagccaacct 36770 Query: 183 gctctttactcgaaggacctgatagagcagcagcttgctggtccagccatggtacatcca 242 ||||||||||| ||||| |||| ||||| | |||||||| || || ||||| |||||| Sbjct: 36771 gctctttactctaaggaattgatggagcaacgccttgctggccctgctatggtgcatcca 36830 Query: 243 tccgaggcagttgccaagggtacaaagtgggcagaactatttgaacctggagtgaagcat 302 || |||||||||| || ||| |||| |||||||| |||| |||||||||||||||||| Sbjct: 36831 tctcaggcagttgctaaaggtccaaaatgggcagacttattcgaacctggagtgaagcat 36890 Query: 303 gcactgtttgttggcattggattacagatcctgca 337 || |||||||||||||| || |||| |||||||| Sbjct: 36891 gctctgtttgttggcatagggatacaaatcctgca 36925 Score = 172 bits (87), Expect = 9e-40 Identities = 168/195 (86%) Strand = Plus / Plus Query: 338 gcagtttgcgggtatcaacggagtcctgtattacacgcctcagatacttgagcaagcagg 397 ||||||||| || || || ||||| ||||| ||||| || || || ||||||||||| || Sbjct: 37578 gcagtttgctggcattaatggagttctgtactacactccacaaattcttgagcaagctgg 37637 Query: 398 tgttgggattcttctatcaaacattggactaagctcttcctctgcatctattcttattag 457 |||||| ||||||| ||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 37638 tgttggtgttcttcttgcaaacattggacttagctcctcatctgcatctattcttattag 37697 Query: 458 tgccttgacaaccttgctgatgcttcccagcattggcatcgccatgagactcatggatat 517 | ||||||||||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 37698 cggactgacaaccttgctgatgcttcccagcattggtattgctatgaggctcatggatat 37757 Query: 518 gtcaggaagaaggtt 532 ||| ||||||||||| Sbjct: 37758 gtctggaagaaggtt 37772 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 528 aggtttcttctcctctcaacaatccctgtcttgatagtggcactagctatcttggttttg 587 |||||||||||||| ||||||||||| || ||||||| ||||||||||||||| || || Sbjct: 37866 aggtttcttctccttgcaacaatccctatcctgatagtagcactagctatcttgattctg 37925 Query: 588 gtgaatgttctggatgtggg 607 || ||| ||||||||||||| Sbjct: 37926 gtcaatattctggatgtggg 37945
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 307 bits (155), Expect = 2e-80 Identities = 290/335 (86%) Strand = Plus / Plus Query: 3 gcttggaagtggactgagagagaaggtgcagatgggcaaaaagaaggtggcttccagcgt 62 |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 20531301 gcttggaaatggactgagagagaaggtgcagatggcgaaaaagaaggtggcttccaacgt 20531360 Query: 63 atttacttgcatgaggagggtgtgtcaggtgatcggagaggctctatattgtctatgcca 122 || ||||||||||| ||||||||| |||||||||| || ||||||||| |||| |||| Sbjct: 20531361 atctacttgcatgaagagggtgtgacaggtgatcgcaggggctctatactgtcattgcct 20531420 Query: 123 ggaggtgatattcctcctggtggtgagtatatccaggcagccgctctagtgagccaacct 182 ||||||||| |||||||||||||||||| |||||||||| ||||| || ||||||||| Sbjct: 20531421 ggaggtgatgttcctcctggtggtgagttcgtccaggcagctgctcttgtcagccaacct 20531480 Query: 183 gctctttactcgaaggacctgatagagcagcagcttgctggtccagccatggtacatcca 242 ||||||||||| ||||| |||| ||||| | |||||||| || || ||||| |||||| Sbjct: 20531481 gctctttactctaaggaattgatggagcaacgccttgctggccctgctatggtgcatcca 20531540 Query: 243 tccgaggcagttgccaagggtacaaagtgggcagaactatttgaacctggagtgaagcat 302 || |||||||||| || ||| |||| |||||||| |||| |||||||||||||||||| Sbjct: 20531541 tctcaggcagttgctaaaggtccaaaatgggcagacttattcgaacctggagtgaagcat 20531600 Query: 303 gcactgtttgttggcattggattacagatcctgca 337 || |||||||||||||| || |||| |||||||| Sbjct: 20531601 gctctgtttgttggcatagggatacaaatcctgca 20531635 Score = 172 bits (87), Expect = 9e-40 Identities = 168/195 (86%) Strand = Plus / Plus Query: 338 gcagtttgcgggtatcaacggagtcctgtattacacgcctcagatacttgagcaagcagg 397 ||||||||| || || || ||||| ||||| ||||| || || || ||||||||||| || Sbjct: 20532288 gcagtttgctggcattaatggagttctgtactacactccacaaattcttgagcaagctgg 20532347 Query: 398 tgttgggattcttctatcaaacattggactaagctcttcctctgcatctattcttattag 457 |||||| ||||||| ||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 20532348 tgttggtgttcttcttgcaaacattggacttagctcctcatctgcatctattcttattag 20532407 Query: 458 tgccttgacaaccttgctgatgcttcccagcattggcatcgccatgagactcatggatat 517 | ||||||||||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 20532408 cggactgacaaccttgctgatgcttcccagcattggtattgctatgaggctcatggatat 20532467 Query: 518 gtcaggaagaaggtt 532 ||| ||||||||||| Sbjct: 20532468 gtctggaagaaggtt 20532482 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 528 aggtttcttctcctctcaacaatccctgtcttgatagtggcactagctatcttggttttg 587 |||||||||||||| ||||||||||| || ||||||| ||||||||||||||| || || Sbjct: 20532576 aggtttcttctccttgcaacaatccctatcctgatagtagcactagctatcttgattctg 20532635 Query: 588 gtgaatgttctggatgtggg 607 || ||| ||||||||||||| Sbjct: 20532636 gtcaatattctggatgtggg 20532655
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 307 bits (155), Expect = 2e-80 Identities = 290/335 (86%) Strand = Plus / Plus Query: 3 gcttggaagtggactgagagagaaggtgcagatgggcaaaaagaaggtggcttccagcgt 62 |||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 20542573 gcttggaaatggactgagagagaaggtgcagatggcgaaaaagaaggtggcttccaacgt 20542632 Query: 63 atttacttgcatgaggagggtgtgtcaggtgatcggagaggctctatattgtctatgcca 122 || ||||||||||| ||||||||| |||||||||| || ||||||||| |||| |||| Sbjct: 20542633 atctacttgcatgaagagggtgtgacaggtgatcgcaggggctctatactgtcattgcct 20542692 Query: 123 ggaggtgatattcctcctggtggtgagtatatccaggcagccgctctagtgagccaacct 182 ||||||||| |||||||||||||||||| |||||||||| ||||| || ||||||||| Sbjct: 20542693 ggaggtgatgttcctcctggtggtgagttcgtccaggcagctgctcttgtcagccaacct 20542752 Query: 183 gctctttactcgaaggacctgatagagcagcagcttgctggtccagccatggtacatcca 242 ||||||||||| ||||| |||| ||||| | |||||||| || || ||||| |||||| Sbjct: 20542753 gctctttactctaaggaattgatggagcaacgccttgctggccctgctatggtgcatcca 20542812 Query: 243 tccgaggcagttgccaagggtacaaagtgggcagaactatttgaacctggagtgaagcat 302 || |||||||||| || ||| |||| |||||||| |||| |||||||||||||||||| Sbjct: 20542813 tctcaggcagttgctaaaggtccaaaatgggcagacttattcgaacctggagtgaagcat 20542872 Query: 303 gcactgtttgttggcattggattacagatcctgca 337 || |||||||||||||| || |||| |||||||| Sbjct: 20542873 gctctgtttgttggcatagggatacaaatcctgca 20542907 Score = 172 bits (87), Expect = 9e-40 Identities = 168/195 (86%) Strand = Plus / Plus Query: 338 gcagtttgcgggtatcaacggagtcctgtattacacgcctcagatacttgagcaagcagg 397 ||||||||| || || || ||||| ||||| ||||| || || || ||||||||||| || Sbjct: 20543560 gcagtttgctggcattaatggagttctgtactacactccacaaattcttgagcaagctgg 20543619 Query: 398 tgttgggattcttctatcaaacattggactaagctcttcctctgcatctattcttattag 457 |||||| ||||||| ||||||||||||| ||||| || |||||||||||||||||||| Sbjct: 20543620 tgttggtgttcttcttgcaaacattggacttagctcctcatctgcatctattcttattag 20543679 Query: 458 tgccttgacaaccttgctgatgcttcccagcattggcatcgccatgagactcatggatat 517 | ||||||||||||||||||||||||||||||| || || ||||| ||||||||||| Sbjct: 20543680 cggactgacaaccttgctgatgcttcccagcattggtattgctatgaggctcatggatat 20543739 Query: 518 gtcaggaagaaggtt 532 ||| ||||||||||| Sbjct: 20543740 gtctggaagaaggtt 20543754 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 528 aggtttcttctcctctcaacaatccctgtcttgatagtggcactagctatcttggttttg 587 |||||||||||||| ||||||||||| || ||||||| ||||||||||||||| || || Sbjct: 20543848 aggtttcttctccttgcaacaatccctatcctgatagtagcactagctatcttgattctg 20543907 Query: 588 gtgaatgttctggatgtggg 607 || ||| ||||||||||||| Sbjct: 20543908 gtcaatattctggatgtggg 20543927
>dbj|AK059705.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D08, full insert sequence Length = 1625 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Plus Query: 524 aagaaggtttcttctcctctcaacaatccctgtcttgatagtggcactagctatcttggt 583 |||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||| | Sbjct: 811 aagaaggtttcttctccttgcaacaatccctatcctgatagtagcactagctatcttgat 870 Query: 584 tttggtgaatgttctggatgtggg 607 | |||| ||| ||||||||||||| Sbjct: 871 tctggtcaatattctggatgtggg 894 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 3 gcttggaagtggactgagagagaaggtgcagatgggcaaaaagaaggt 50 |||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 771 gcttggaaatggactgagagagaaggtgcagatggcgaaaaagaaggt 818
>ref|XM_464773.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2934 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 474 ctgatgcttcccagcattggcatcgccatgagactcatggatatgtcaggaagaaggttt 533 ||||||||||| |||||||| | ||||||||||| ||||| || || |||||||||||| Sbjct: 2033 ctgatgcttcctagcattggtttagccatgagacttatggacatctctggaagaaggttt 2092 Query: 534 ct 535 || Sbjct: 2093 ct 2094 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Plus Query: 222 ggtccagccatggtacatccatccgaggcagttgccaagggtacaaagtgggcagaacta 281 |||||||||||| | |||||||| ||||||| |||||| ||| ||| ||| ||| | Sbjct: 1781 ggtccagccatgattcatccatcagaggcagctgccaaaggttcaagctggaaagatttg 1840 Query: 282 tttgaacctggagtgaagcatgcactgtttgttggcattggattacagatcctgcagcag 341 |||||||||||||||| || ||| |||| || || ||||| | || ||||| || ||| Sbjct: 1841 tttgaacctggagtgaggcgtgcgttgttagtcggtgttggaattcaaatccttcaacag 1900 Query: 342 tttgcgggtatcaacggagtcctgtattacacgcctcagatacttgagcaagc 394 ||||| || || || || || || |||||||| || || |||||||||||||| Sbjct: 1901 tttgctggaataaatggggttctctattacactccacaaatacttgagcaagc 1953
>gb|AY861386.1| Vitis vinifera hexose transporter 6 (HT6) mRNA, complete cds Length = 2437 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 150 tatatccaggcagccgctctagtgagccaacctgctctttactcgaagga 199 ||||||||||| || ||||||||||| || |||||||||||||| ||||| Sbjct: 1564 tatatccaggctgctgctctagtgagtcagcctgctctttactctaagga 1613 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 6 tggaagtggactgagagagaaggtgcagatgg 37 ||||| ||| ||||||||||||||| |||||| Sbjct: 1420 tggaaatggtctgagagagaaggtgaagatgg 1451
>gb|DQ017393.1| Vitis vinifera cultivar Syrah putative hexose transporter (HT6) mRNA, complete cds Length = 2521 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 150 tatatccaggcagccgctctagtgagccaacctgctctttactcgaagga 199 ||||||||||| || ||||||||||| || |||||||||||||| ||||| Sbjct: 1538 tatatccaggctgctgctctagtgagtcagcctgctctttactctaagga 1587 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 6 tggaagtggactgagagagaaggtgcagatgg 37 ||||| ||| ||||||||||||||| |||||| Sbjct: 1394 tggaaatggtctgagagagaaggtgaagatgg 1425
>dbj|AK120560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132C18, full insert sequence Length = 2934 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 474 ctgatgcttcccagcattggcatcgccatgagactcatggatatgtcaggaagaaggttt 533 ||||||||||| |||||||| | ||||||||||| ||||| || || |||||||||||| Sbjct: 2032 ctgatgcttcctagcattggtttagccatgagacttatggacatctctggaagaaggttt 2091 Query: 534 ct 535 || Sbjct: 2092 ct 2093 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Plus Query: 222 ggtccagccatggtacatccatccgaggcagttgccaagggtacaaagtgggcagaacta 281 |||||||||||| | |||||||| ||||||| |||||| ||| ||| ||| ||| | Sbjct: 1780 ggtccagccatgattcatccatcagaggcagctgccaaaggttcaagctggaaagatttg 1839 Query: 282 tttgaacctggagtgaagcatgcactgtttgttggcattggattacagatcctgcagcag 341 |||||||||||||||| || ||| |||| || || ||||| | || ||||| || ||| Sbjct: 1840 tttgaacctggagtgaggcgtgcgttgttagtcggtgttggaattcaaatccttcaacag 1899 Query: 342 tttgcgggtatcaacggagtcctgtattacacgcctcagatacttgagcaagc 394 ||||| || || || || || || |||||||| || || |||||||||||||| Sbjct: 1900 tttgctggaataaatggggttctctattacactccacaaatacttgagcaagc 1952
>dbj|AK099716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013086B19, full insert sequence Length = 2378 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 474 ctgatgcttcccagcattggcatcgccatgagactcatggatatgtcaggaagaaggttt 533 ||||||||||| |||||||| | ||||||||||| ||||| || || |||||||||||| Sbjct: 1543 ctgatgcttcctagcattggtttagccatgagacttatggacatctctggaagaaggttt 1602 Query: 534 ct 535 || Sbjct: 1603 ct 1604 Score = 50.1 bits (25), Expect = 0.009 Identities = 136/173 (78%) Strand = Plus / Plus Query: 222 ggtccagccatggtacatccatccgaggcagttgccaagggtacaaagtgggcagaacta 281 |||||||||||| | ||| |||| ||||||| |||||| ||| ||| ||| ||| | Sbjct: 1291 ggtccagccatgattcatacatcagaggcagctgccaaaggttcaagctggaaagatttg 1350 Query: 282 tttgaacctggagtgaagcatgcactgtttgttggcattggattacagatcctgcagcag 341 |||||||||||||||| || ||| |||| || || ||||| | || ||||| || ||| Sbjct: 1351 tttgaacctggagtgaggcgtgcgttgttagtcggtgttggaattcaaatccttcaacag 1410 Query: 342 tttgcgggtatcaacggagtcctgtattacacgcctcagatacttgagcaagc 394 ||||| || || || || || || |||||||| || || |||||||||||||| Sbjct: 1411 tttgctggaataaatggggttctctattacactccacaaatacttgagcaagc 1463
>dbj|AP004945.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43B20, TM0117b, complete sequence Length = 114918 Score = 58.0 bits (29), Expect = 4e-05 Identities = 110/137 (80%) Strand = Plus / Plus Query: 348 ggtatcaacggagtcctgtattacacgcctcagatacttgagcaagcaggtgttgggatt 407 |||||||| || |||||||| || || ||||| || |||||||| ||||||||||| | Sbjct: 51132 ggtatcaatggtgtcctgtactatacacctcaaattcttgagcaggcaggtgttggttat 51191 Query: 408 cttctatcaaacattggactaagctcttcctctgcatctattcttattagtgccttgaca 467 ||||| |||||| | || || | || | ||| ||||| ||||||| ||||| |||||| Sbjct: 51192 cttctttcaaacctgggccttggttcaacttcttcatcttttcttataagtgctttgaca 51251 Query: 468 accttgctgatgcttcc 484 || ||| |||||||||| Sbjct: 51252 acattgttgatgcttcc 51268
>gb|BT009593.1| Triticum aestivum clone wre1n.pk0062.g6:fis, full insert mRNA sequence Length = 1315 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 468 accttgctgatgcttcccagcattggcatcgccatgagactcatggatatgtcaggaaga 527 ||||| || ||||| || |||||||| | ||||||||||| |||||||| || |||||| Sbjct: 365 accttactcatgctcccaagcattggtgtagccatgagacttatggatatatctggaaga 424 Query: 528 aggtttct 535 |||||||| Sbjct: 425 aggtttct 432 Score = 46.1 bits (23), Expect = 0.13 Identities = 140/179 (78%) Strand = Plus / Plus Query: 222 ggtccagccatggtacatccatccgaggcagttgccaagggtacaaagtgggcagaacta 281 |||||||||||| | ||||||| ||||||| | |||| ||| ||| ||| ||| || Sbjct: 119 ggtccagccatgattcatccattggaggcagctcccaaaggttcaatctggaaagatctg 178 Query: 282 tttgaacctggagtgaagcatgcactgtttgttggcattggattacagatcctgcagcag 341 ||||||||||| |||| || |||| |||| || || ||||| | ||||| || |||||| Sbjct: 179 tttgaacctggtgtgaggcgtgcattgttcgtcggtgttggaattcagatgcttcagcag 238 Query: 342 tttgcgggtatcaacggagtcctgtattacacgcctcagatacttgagcaagcaggtgt 400 ||||| || || || ||||| || || || || ||||| || || |||||||| ||||| Sbjct: 239 tttgctggaataaatggagttctctactatactcctcaaattctggagcaagctggtgt 297
>gb|AY105508.1| Zea mays PCO114533 mRNA sequence Length = 2180 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 282 tttgaacctggagtgaagcatgcactgtttgttggcattggattacagatcctgcagcag 341 |||||||||||||||| || ||| ||||| || || ||||| | |||||||| || ||| Sbjct: 1151 tttgaacctggagtgaggcgtgccctgttagtcggtgttggaattcagatccttcaacag 1210 Query: 342 tttgcgggtatcaacggagtcctgtattacacgcctcagatacttgagcaagcaggtgt 400 ||||| || || ||||| || ||||| || || || || || ||||||||||| ||||| Sbjct: 1211 tttgctggaataaacggtgttctgtactataccccacaaattcttgagcaagctggtgt 1269
>ref|NM_179234.1| Arabidopsis thaliana carbohydrate transporter/ nucleoside transporter/ sugar porter AT4G35300 transcript variant AT4G35300.1 mRNA, complete cds Length = 2590 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 351 atcaacggagtcctgtattacacgcctcagatacttgagcaagcaggtgttgggattctt 410 ||||||||||| || || ||||| || || || |||||||| || ||||| ||||| || Sbjct: 1791 atcaacggagttctttactacacaccgcaaatccttgagcaggcgggtgtcgggatccta 1850 Query: 411 ctatcaaacattggactaagctcttcctctgcatctattcttattagtgccttgacaacc 470 ||||| ||||| || | || |||||||| ||||| | ||||| ||||| ||||||||| Sbjct: 1851 ctatcgaacatggggattagttcttcctcagcatccttacttataagtgcattgacaacc 1910 Query: 471 tt 472 || Sbjct: 1911 tt 1912
>ref|NM_119696.4| Arabidopsis thaliana carbohydrate transporter/ sugar porter AT4G35300 transcript variant AT4G35300.2 mRNA, complete cds Length = 2591 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 351 atcaacggagtcctgtattacacgcctcagatacttgagcaagcaggtgttgggattctt 410 ||||||||||| || || ||||| || || || |||||||| || ||||| ||||| || Sbjct: 1792 atcaacggagttctttactacacaccgcaaatccttgagcaggcgggtgtcgggatccta 1851 Query: 411 ctatcaaacattggactaagctcttcctctgcatctattcttattagtgccttgacaacc 470 ||||| ||||| || | || |||||||| ||||| | ||||| ||||| ||||||||| Sbjct: 1852 ctatcgaacatggggattagttcttcctcagcatccttacttataagtgcattgacaacc 1911 Query: 471 tt 472 || Sbjct: 1912 tt 1913
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83 Length = 197859 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Minus Query: 351 atcaacggagtcctgtattacacgcctcagatacttgagcaagcaggtgttgggattctt 410 ||||||||||| || || ||||| || || || |||||||| || ||||| ||||| || Sbjct: 61765 atcaacggagttctttactacacaccgcaaatccttgagcaggcgggtgtcgggatccta 61706 Query: 411 ctatcaaacattggactaagctcttcctctgcatctattcttattagtgccttgacaacc 470 ||||| ||||| || | || |||||||| ||||| | ||||| ||||| ||||||||| Sbjct: 61705 ctatcgaacatggggattagttcttcctcagcatccttacttataagtgcattgacaacc 61646 Query: 471 tt 472 || Sbjct: 61645 tt 61644
>emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E12 (ESSA project) Length = 86710 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 351 atcaacggagtcctgtattacacgcctcagatacttgagcaagcaggtgttgggattctt 410 ||||||||||| || || ||||| || || || |||||||| || ||||| ||||| || Sbjct: 41586 atcaacggagttctttactacacaccgcaaatccttgagcaggcgggtgtcgggatccta 41645 Query: 411 ctatcaaacattggactaagctcttcctctgcatctattcttattagtgccttgacaacc 470 ||||| ||||| || | || |||||||| ||||| | ||||| ||||| ||||||||| Sbjct: 41646 ctatcgaacatggggattagttcttcctcagcatccttacttataagtgcattgacaacc 41705 Query: 471 tt 472 || Sbjct: 41706 tt 41707
>gb|AY094465.1| Arabidopsis thaliana AT4g35300/F23E12_140 mRNA, complete cds Length = 2570 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 351 atcaacggagtcctgtattacacgcctcagatacttgagcaagcaggtgttgggattctt 410 ||||||||||| || || ||||| || || || |||||||| || ||||| ||||| || Sbjct: 1805 atcaacggagttctttactacacaccgcaaatccttgagcaggcgggtgtcgggatccta 1864 Query: 411 ctatcaaacattggactaagctcttcctctgcatctattcttattagtgccttgacaacc 470 ||||| ||||| || | || |||||||| ||||| | ||||| ||||| ||||||||| Sbjct: 1865 ctatcgaacatggggattagttcttcctcagcatccttacttataagtgcattgacaacc 1924 Query: 471 tt 472 || Sbjct: 1925 tt 1926
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 474 ctgatgcttcccagcattggcatcgccatgagactcatggatatgtcaggaagaaggt 531 ||||||||||| |||||||| | ||||||||||| ||||| || || |||||||||| Sbjct: 7276333 ctgatgcttcctagcattggtttagccatgagacttatggacatctctggaagaaggt 7276390 Score = 48.1 bits (24), Expect = 0.034 Identities = 63/76 (82%) Strand = Plus / Plus Query: 222 ggtccagccatggtacatccatccgaggcagttgccaagggtacaaagtgggcagaacta 281 |||||||||||| | |||||||| ||||||| |||||| ||| ||| ||| ||| | Sbjct: 7275966 ggtccagccatgattcatccatcagaggcagctgccaaaggttcaagctggaaagatttg 7276025 Query: 282 tttgaacctggagtga 297 |||||||||||||||| Sbjct: 7276026 tttgaacctggagtga 7276041 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 327 cagatcctgcagcagtttgcgggtatcaacggagtcctgtattacacgcctcagatactt 386 ||||||||||||||||| |||| |||| ||| || || | |||||||| |||||||| Sbjct: 35799219 cagatcctgcagcagttctcgggcatcagcggcgtgctcttgtacacgccgcagatactg 35799278 Query: 387 gagca 391 ||||| Sbjct: 35799279 gagca 35799283
>emb|BX828912.1|CNS0A3H4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL50ZE01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1135 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 351 atcaacggagtcctgtattacacgcctcagatacttgagcaagcaggtgttgggattctt 410 ||||||||||| || || ||||| || || || |||||||| || ||||| ||||| || Sbjct: 451 atcaacggagttctttactacacaccgcaaatccttgagcaggcgggtgtcgggatccta 510 Query: 411 ctatcaaacattggactaagctcttcctctgcatctattcttattagtgccttgacaacc 470 ||||| ||||| || | || |||||||| ||||| | ||||| ||||| ||||||||| Sbjct: 511 ctatcgaacatggggattagttcttcctcagcatccttacttataagtgcattgacaacc 570 Query: 471 tt 472 || Sbjct: 571 tt 572
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 474 ctgatgcttcccagcattggcatcgccatgagactcatggatatgtcaggaagaaggt 531 ||||||||||| |||||||| | ||||||||||| ||||| || || |||||||||| Sbjct: 52141 ctgatgcttcctagcattggtttagccatgagacttatggacatctctggaagaaggt 52198 Score = 48.1 bits (24), Expect = 0.034 Identities = 63/76 (82%) Strand = Plus / Plus Query: 222 ggtccagccatggtacatccatccgaggcagttgccaagggtacaaagtgggcagaacta 281 |||||||||||| | |||||||| ||||||| |||||| ||| ||| ||| ||| | Sbjct: 51774 ggtccagccatgattcatccatcagaggcagctgccaaaggttcaagctggaaagatttg 51833 Query: 282 tttgaacctggagtga 297 |||||||||||||||| Sbjct: 51834 tttgaacctggagtga 51849
>emb|AJ532570.1|ATH532570 Arabidopsis thaliana mRNA for monosaccharide sensing protein 2 (mssp2 gene) Length = 2190 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 351 atcaacggagtcctgtattacacgcctcagatacttgagcaagcaggtgttgggattctt 410 ||||||||||| || || ||||| || || || |||||||| || ||||| ||||| || Sbjct: 1567 atcaacggagttctttactacacaccgcaaatccttgagcaggcgggtgtcgggatccta 1626 Query: 411 ctatcaaacattggactaagctcttcctctgcatctattcttattagtgccttgacaacc 470 ||||| ||||| || | || |||||||| ||||| | ||||| ||||| ||||||||| Sbjct: 1627 ctatcgaacatggggattagttcttcctcagcatccttacttataagtgcattgacaacc 1686 Query: 471 tt 472 || Sbjct: 1687 tt 1688
>emb|CT025534.4| M.truncatula DNA sequence from clone MTH2-1H4 on chromosome 3, complete sequence Length = 100991 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Plus Query: 384 cttgagcaagcaggtgttgggattcttctatcaaacattggactaagctcttcctctgca 443 |||||||| ||||||||||| |||||| |||||| | || || || ||| | || || Sbjct: 32784 cttgagcaggcaggtgttggatatcttctttcaaacctgggccttagttctacttcatca 32843 Query: 444 tctattcttattagtgccttgacaaccttgctgatgcttcc 484 ||| |||| |||||||| ||||||||||| |||||||||| Sbjct: 32844 tcttttctaattagtgcagtgacaaccttgttgatgcttcc 32884 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 acaatccctgtcttgatagt 565 |||||||||||||||||||| Sbjct: 33965 acaatccctgtcttgatagt 33984 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 282 tttgaacctggagtgaagcatgcactgtttgt 313 |||||||| || |||||||||||| ||||||| Sbjct: 31205 tttgaaccgggggtgaagcatgcattgtttgt 31236
>gb|AC121239.34| Medicago truncatula clone mth1-8p19, complete sequence Length = 100985 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Plus Query: 384 cttgagcaagcaggtgttgggattcttctatcaaacattggactaagctcttcctctgca 443 |||||||| ||||||||||| |||||| |||||| | || || || ||| | || || Sbjct: 32779 cttgagcaggcaggtgttggatatcttctttcaaacctgggccttagttctacttcatca 32838 Query: 444 tctattcttattagtgccttgacaaccttgctgatgcttcc 484 ||| |||| |||||||| ||||||||||| |||||||||| Sbjct: 32839 tcttttctaattagtgcagtgacaaccttgttgatgcttcc 32879 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 546 acaatccctgtcttgatagt 565 |||||||||||||||||||| Sbjct: 33960 acaatccctgtcttgatagt 33979 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 282 tttgaacctggagtgaagcatgcactgtttgt 313 |||||||| || |||||||||||| ||||||| Sbjct: 31200 tttgaaccgggggtgaagcatgcattgtttgt 31231
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 124 gaggtgatattcctcctggtggtg 147 |||||||||||||||||||||||| Sbjct: 1346944 gaggtgatattcctcctggtggtg 1346967
>ref|NM_101937.3| Arabidopsis thaliana carbohydrate transporter/ nucleoside transporter/ sugar porter AT1G20840 mRNA, complete cds Length = 2488 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 498 gccatgagactcatggatatgtcaggaagaaggt 531 |||||||||||||||||| | || |||||||||| Sbjct: 1838 gccatgagactcatggatgtatccggaagaaggt 1871 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 333 ctgcagcagtttgcgggtatcaacggagtcctgtattacacgcctcagat 382 |||||||||||| | |||||||| ||||| || || ||||| |||||||| Sbjct: 1673 ctgcagcagttttcaggtatcaatggagttctctactacactcctcagat 1722
>emb|AL356504.5| Human DNA sequence from clone RP1-14N1 on chromosome 1q21.1-21.3 Contains part of a novel gene, the FLG gene for filaggrin and the gene for a novel S-100/ICaBP type calcium binding domain and EF hand domain containing protein, complete sequence Length = 83549 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 5 ttggaagtggactgagagagaaggtgcaga 34 ||||||||||||| ||||||||||||||| Sbjct: 49171 ttggaagtggactatgagagaaggtgcaga 49200
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 124 gaggtgatattcctcctggtgg 145 |||||||||||||||||||||| Sbjct: 3085813 gaggtgatattcctcctggtgg 3085792
>gb|AC069251.5|AC069251 Genomic sequence for Arabidopsis thaliana BAC F2D10 from chromosome I, complete sequence Length = 143879 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Minus Query: 498 gccatgagactcatggatatgtcaggaagaaggt 531 |||||||||||||||||| | || |||||||||| Sbjct: 136129 gccatgagactcatggatgtatccggaagaaggt 136096
>emb|Z50752.1|ATSUGTRPR A.thaliana mRNA for sugar transporter Length = 2426 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 498 gccatgagactcatggatatgtcaggaagaaggt 531 |||||||||||||||||| | || |||||||||| Sbjct: 1759 gccatgagactcatggatgtatccggaagaaggt 1792 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 333 ctgcagcagtttgcgggtatcaacggagtcctgtattacacgcctcagat 382 |||||||||||| | |||||||| ||||| || || ||||| |||||||| Sbjct: 1594 ctgcagcagttttcaggtatcaatggagttctctactacactcctcagat 1643
>gb|AC007369.2| Arabidopsis thaliana chromosome I BAC F9H16 genomic sequence, complete sequence Length = 103192 Score = 44.1 bits (22), Expect = 0.53 Identities = 31/34 (91%) Strand = Plus / Plus Query: 498 gccatgagactcatggatatgtcaggaagaaggt 531 |||||||||||||||||| | || |||||||||| Sbjct: 102201 gccatgagactcatggatgtatccggaagaaggt 102234
>ref|XM_493807.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2172 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 tattacacgcctcagatacttgagcaagc 394 |||||||| ||||| |||||||||||||| Sbjct: 1561 tattacactcctcaaatacttgagcaagc 1589
>ref|XM_468552.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1959 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 327 cagatcctgcagcagtttgcgggtatcaacggagtcctgtattacacgcctcagatactt 386 ||||||||||||||||| |||| |||| ||| || || | |||||||| |||||||| Sbjct: 1297 cagatcctgcagcagttctcgggcatcagcggcgtgctcttgtacacgccgcagatactg 1356 Query: 387 gagca 391 ||||| Sbjct: 1357 gagca 1361
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 tgggcaaaaagaaggtggctt 55 ||||||||||||||||||||| Sbjct: 2426824 tgggcaaaaagaaggtggctt 2426804
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 tattacacgcctcagatacttgagcaagc 394 |||||||| ||||| |||||||||||||| Sbjct: 1617091 tattacactcctcaaatacttgagcaagc 1617119
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07, complete sequence Length = 87592 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 tattacacgcctcagatacttgagcaagc 394 |||||||| ||||| |||||||||||||| Sbjct: 24537 tattacactcctcaaatacttgagcaagc 24565
>emb|CR628406.8| Zebrafish DNA sequence from clone CH211-146A2 in linkage group 11, complete sequence Length = 145678 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gaggagggtgtgtcaggtgat 95 ||||||||||||||||||||| Sbjct: 65195 gaggagggtgtgtcaggtgat 65175
>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07, complete sequence Length = 127098 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 tattacacgcctcagatacttgagcaagc 394 |||||||| ||||| |||||||||||||| Sbjct: 96652 tattacactcctcaaatacttgagcaagc 96680
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 tattacacgcctcagatacttgagcaagc 394 |||||||| ||||| |||||||||||||| Sbjct: 1617089 tattacactcctcaaatacttgagcaagc 1617117
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 aaaaagaaggtggcttccagc 60 ||||||||||||||||||||| Sbjct: 1905855 aaaaagaaggtggcttccagc 1905835
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 327 cagatcctgcagcagtttgcgggtatcaacggagtcctgtattacacgcctcagatactt 386 ||||||||||||||||| |||| |||| ||| || || | |||||||| |||||||| Sbjct: 69934 cagatcctgcagcagttctcgggcatcagcggcgtgctcttgtacacgccgcagatactg 69993 Query: 387 gagca 391 ||||| Sbjct: 69994 gagca 69998
>gb|L33952.1|MUSBALB11V Mus musculus clone BPS3.24 germline Ig variable region heavy chain precursor gene, partial cds Length = 969 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 taagctcttcctctgcatctattct 451 |||| |||||||||||||||||||| Sbjct: 401 taagttcttcctctgcatctattct 425
>gb|L33956.1|MUSBALB58V Mus musculus clone BPS1.2 germline Ig variable region heavy chain precursor pseudogene, partial sequence Length = 967 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 427 taagctcttcctctgcatctattct 451 |||| |||||||||||||||||||| Sbjct: 401 taagttcttcctctgcatctattct 425
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, clone:P0043E01 Length = 154128 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 tattacacgcctcagatacttgagcaagc 394 |||||||| ||||| |||||||||||||| Sbjct: 29554 tattacactcctcaaatacttgagcaagc 29582
>gb|AC105981.10| Mus musculus chromosome 8, clone RP24-210I22, complete sequence Length = 167656 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ttgctgatgcttcccagcat 490 |||||||||||||||||||| Sbjct: 70442 ttgctgatgcttcccagcat 70423
>gb|AE000659.1|HUAE000659 Homo sapiens T-cell receptor alpha delta locus from bases 250472 to 501670 (section 2 of 5) of the Complete Nucleotide Sequence Length = 251199 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 tagctatcttggttttggtg 590 |||||||||||||||||||| Sbjct: 32388 tagctatcttggttttggtg 32369
>gb|AC147642.2| Mus musculus BAC clone RP23-27D6 from chromosome 14, complete sequence Length = 212100 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tcaaacattggactaagctc 433 |||||||||||||||||||| Sbjct: 163405 tcaaacattggactaagctc 163386
>gb|AC125193.3| Mus musculus BAC clone RP23-268I12 from chromosome 14, complete sequence Length = 167771 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tcaaacattggactaagctc 433 |||||||||||||||||||| Sbjct: 85300 tcaaacattggactaagctc 85281
>gb|AC144809.2| Mus musculus BAC clone RP24-391L5 from chromosome 9, complete sequence Length = 185599 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 acttgcatgaggagggtgtg 86 |||||||||||||||||||| Sbjct: 57062 acttgcatgaggagggtgtg 57043
>gb|AC154655.2| Mus musculus BAC clone RP24-263O11 from chromosome 14, complete sequence Length = 196744 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 gactaagctcttcctctgcatcta 447 ||||||||||||| |||||||||| Sbjct: 123796 gactaagctcttcatctgcatcta 123773
>gb|AC117214.3| Mus musculus BAC clone RP23-307B15 from chromosome 9, complete sequence Length = 219833 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 acttgcatgaggagggtgtg 86 |||||||||||||||||||| Sbjct: 18365 acttgcatgaggagggtgtg 18384
>gb|AC116598.3| Mus musculus BAC clone RP24-419D22 from chromosome 5, complete sequence Length = 175438 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 atgtcaggaagaaggtttct 535 |||||||||||||||||||| Sbjct: 146341 atgtcaggaagaaggtttct 146322
>emb|CR936365.7| Zebrafish DNA sequence from clone CH73-41C10 in linkage group 22, complete sequence Length = 133687 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 gaggagggtgtgtcaggtgatcgg 98 |||||||||| ||||||||||||| Sbjct: 117761 gaggagggtgggtcaggtgatcgg 117784
>emb|CR690521.2|CNS0FVR9 Tetraodon nigroviridis full-length cDNA Length = 495 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 atgggcaaaaagaaggtggc 53 |||||||||||||||||||| Sbjct: 214 atgggcaaaaagaaggtggc 233
>gb|AC127019.29| Medicago truncatula clone mth2-31b1, complete sequence Length = 122810 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 375 cctcagatacttgagcaagcaggtgttgggattcttctatcaaa 418 |||||||| |||||||| ||||| || ||| |||||||||||| Sbjct: 103942 cctcagattcttgagcaggcaggagtaggggctcttctatcaaa 103899
>emb|AL096799.6|HSJ764O22 Human DNA sequence from clone RP4-764O22 on chromosome 20 Contains the parts of two novel genes, complete sequence Length = 82812 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 tgagccaacctgctctttac 191 |||||||||||||||||||| Sbjct: 56493 tgagccaacctgctctttac 56474
>emb|AL035415.22|HS705F19 Human DNA sequence from clone RP4-705F19 on chromosome 1p32.2-34.2 Contains the 5' end of the SSBP3 gene for single stranded DNA binding protein 3, two novel genes and a CpG island, complete sequence Length = 136502 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 agagcagcagcttgctggtc 225 |||||||||||||||||||| Sbjct: 119044 agagcagcagcttgctggtc 119063
>gb|AY165599.1| Saccharum hybrid cultivar putative sugar transporter type 2a mRNA, complete cds Length = 2665 Score = 40.1 bits (20), Expect = 8.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 282 tttgaacctggagtgaagcatgcactgtttgttggcattggattacagatcctgcagcag 341 ||||||||||| |||| | ||| ||||| ||||| |||||| | |||||||| || ||| Sbjct: 1648 tttgaacctggtgtgagacgtgccctgttggttggtattggaattcagatccttcaacag 1707 Query: 342 tttgcggg 349 || ||||| Sbjct: 1708 ttcgcggg 1715
>emb|BX511150.6| Zebrafish DNA sequence from clone CH211-234E22 in linkage group 14, complete sequence Length = 38668 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 gaggagggtgtgtcaggtgatcgg 98 |||||||||||||||| ||||||| Sbjct: 18934 gaggagggtgtgtcagttgatcgg 18957
>emb|CR847930.5| Zebrafish DNA sequence from clone DKEY-148H19 in linkage group 19, complete sequence Length = 167262 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 gaggagggtgtgtcaggtgatcgg 98 |||||||||||||||| ||||||| Sbjct: 101304 gaggagggtgtgtcagttgatcgg 101327
>gb|AC105130.8| Homo sapiens chromosome 8, clone RP11-357L10, complete sequence Length = 188410 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 504 agactcatggatatgtcaggaaga 527 |||| ||||||||||||||||||| Sbjct: 6899 agacacatggatatgtcaggaaga 6876
>emb|BX324131.6| Zebrafish DNA sequence from clone CH211-119E14 in linkage group 7, complete sequence Length = 198318 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 actcgaaggacctgatagag 209 |||||||||||||||||||| Sbjct: 145881 actcgaaggacctgatagag 145900
>gb|AC138582.22| Pan troglodytes clone rp43-21p1, complete sequence Length = 119613 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 aagcaggtgttgggattctt 410 |||||||||||||||||||| Sbjct: 29911 aagcaggtgttgggattctt 29930
>gb|AC138065.25| Pan troglodytes clone rp43-11g4, complete sequence Length = 173247 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 aagcaggtgttgggattctt 410 |||||||||||||||||||| Sbjct: 16636 aagcaggtgttgggattctt 16617
>dbj|AK138349.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230076D15 product:unclassifiable, full insert sequence Length = 878 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 atgtcaggaagaaggtttct 535 |||||||||||||||||||| Sbjct: 130 atgtcaggaagaaggtttct 111
>ref|XM_693966.1| PREDICTED: Danio rerio similar to deltex 4 homolog (LOC570481), partial mRNA Length = 1582 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 actcgaaggacctgatagag 209 |||||||||||||||||||| Sbjct: 995 actcgaaggacctgatagag 1014
>gb|AC158401.5| Mus musculus chromosome 7, clone RP23-84N6, complete sequence Length = 247769 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 caaacattggactaagctct 434 |||||||||||||||||||| Sbjct: 219765 caaacattggactaagctct 219784
>gb|AC158783.5| Mus musculus chromosome 5, clone RP23-144P3, complete sequence Length = 193276 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 atgtcaggaagaaggtttct 535 |||||||||||||||||||| Sbjct: 156472 atgtcaggaagaaggtttct 156491
>gb|AC000029.17| Homo sapiens Chromosome 22q11.2 BAC Clone 865e9 In GNAZ-BCR Region, complete sequence Length = 142979 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 aagcaggtgttgggattctt 410 |||||||||||||||||||| Sbjct: 76548 aagcaggtgttgggattctt 76567
>dbj|AK041797.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630038M18 product:hypothetical protein, full insert sequence Length = 1072 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 atgtcaggaagaaggtttct 535 |||||||||||||||||||| Sbjct: 500 atgtcaggaagaaggtttct 481
>emb|BX548049.9| Zebrafish DNA sequence from clone DKEY-217J16 in linkage group 25, complete sequence Length = 175348 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 gaggagggtgtgtcaggtgatcgg 98 |||||||||||||||| ||||||| Sbjct: 66861 gaggagggtgtgtcagttgatcgg 66884
>gb|AC138674.7| Mus musculus chromosome 7, clone RP23-410I10, complete sequence Length = 173504 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 caaacattggactaagctct 434 |||||||||||||||||||| Sbjct: 160677 caaacattggactaagctct 160658
>emb|BX005383.8| Zebrafish DNA sequence from clone DKEYP-19E1 in linkage group 25, complete sequence Length = 142728 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 gaggagggtgtgtcaggtgatcgg 98 |||||||||||||||| ||||||| Sbjct: 9323 gaggagggtgtgtcagttgatcgg 9300
>emb|BX908392.13| Zebrafish DNA sequence from clone DKEY-192M14 in linkage group 22, complete sequence Length = 179577 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 gaggagggtgtgtcaggtgatcgg 98 |||||||||| ||||||||||||| Sbjct: 144830 gaggagggtgggtcaggtgatcgg 144853
>emb|BX537287.8| Zebrafish DNA sequence from clone CH211-206O8 in linkage group 19, complete sequence Length = 195505 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 gaggagggtgtgtcaggtgatcgg 98 |||||||||||||||| ||||||| Sbjct: 116858 gaggagggtgtgtcagttgatcgg 116835
>emb|AL935146.13| Zebrafish DNA sequence from clone CH211-171D11 in linkage group 22, complete sequence Length = 161161 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 gaggagggtgtgtcaggtgatcgg 98 |||||||||| ||||||||||||| Sbjct: 59900 gaggagggtgggtcaggtgatcgg 59923
>emb|CT030636.13| Mouse DNA sequence from clone RP23-432O2 on chromosome 17, complete sequence Length = 204320 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 agagagaaggtgcagatggg 38 |||||||||||||||||||| Sbjct: 134798 agagagaaggtgcagatggg 134817
>gb|AC116804.22| Mus musculus chromosome 17, clone RP24-343C24, complete sequence Length = 186153 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 agagagaaggtgcagatggg 38 |||||||||||||||||||| Sbjct: 160617 agagagaaggtgcagatggg 160636
>gb|AC149592.2| Mus musculus BAC clone RP23-270M4 from 14, complete sequence Length = 204601 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 tcaaacattggactaagctc 433 |||||||||||||||||||| Sbjct: 21929 tcaaacattggactaagctc 21948
>gb|AF005382.1|AF005382 Caldicellulosiruptor saccharolyticus putative xylose repressor (XylR) gene, partial cds, and xylanase (XynI) gene, complete cds Length = 2576 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 aaagtgggcagaactatttg 285 |||||||||||||||||||| Sbjct: 1165 aaagtgggcagaactatttg 1184
>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome 14 Length = 1071646 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 tagctatcttggttttggtg 590 |||||||||||||||||||| Sbjct: 282859 tagctatcttggttttggtg 282840
>emb|AJ249895.1|MMU249895 Mus musculus mas proto-oncogene and Igf2r gene for insulin-like growth factor type 2 and L41ps and Au76 pseudogenes Length = 138490 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 agagagaaggtgcagatggg 38 |||||||||||||||||||| Sbjct: 112658 agagagaaggtgcagatggg 112639
>dbj|AP004369.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-448P19, complete sequences Length = 158310 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 512 ggatatgtcaggaagaaggtttcttctc 539 |||| |||||||||||||| |||||||| Sbjct: 74618 ggatctgtcaggaagaaggcttcttctc 74645 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,595,822 Number of Sequences: 3902068 Number of extensions: 5595822 Number of successful extensions: 99331 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 89 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98927 Number of HSP's gapped (non-prelim): 393 length of query: 610 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 587 effective length of database: 17,143,297,704 effective search space: 10063115752248 effective search space used: 10063115752248 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
