ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal30h15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY106321.1| Zea mays PCO088178 mRNA sequence Length = 748 Score = 335 bits (169), Expect = 1e-88 Identities = 265/297 (89%) Strand = Plus / Plus Query: 149 caagcagtccctgtttgggaacatcaccgaggcgctggacttctcgcaggtccggtcgga 208 |||||||||||| || || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 148 caagcagtccctcttcggaagcatcaccgaggcgctggacttctcgcaggtccggtcgga 207 Query: 209 gaaggacgcggagctgctgtacgaggccagggattccatcaaagatgaagggaggatgac 268 ||||||||| ||||||||||||||||||||||| |||| || || || |||||||||||| Sbjct: 208 gaaggacgccgagctgctgtacgaggccagggagtccaccagaggtggagggaggatgac 267 Query: 269 aagggaacagtatgcagcgcttcggaggaagattggtggcacctacaaggatttcttcaa 328 ||||| ||||| | ||| ||| || |||||||||||||||||||| ||||||||||||| Sbjct: 268 gagggagcagtacggagcacttaggcggaagattggtggcacctaccaggatttcttcaa 327 Query: 329 gtcatatgttgaagttgatggcgaatacgtggaggaaggttgggtggacaagacctgcaa 388 ||||||||||||||| || || ||||||||||||| |||||||| |||||||||||||| Sbjct: 328 gtcatatgttgaagtcgacgggcaatacgtggaggagggttgggtcgacaagacctgcaa 387 Query: 389 agtttgcaagaaagacacaagaggggagccaaggcaagttgacaatctaggaagata 445 | |||||||| |||||||| |||||||| ||||| |||||||| ||||||||||| Sbjct: 388 gatctgcaagaaggacacaaggggggagccgaggcaggttgacaagctaggaagata 444
>ref|NM_190383.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 513 Score = 329 bits (166), Expect = 7e-87 Identities = 265/298 (88%) Strand = Plus / Plus Query: 149 caagcagtccctgtttgggaacatcaccgaggcgctggacttctcgcaggtccggtcgga 208 ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 150 caagcagtcattgttcgggagcatcaccgaggcgctggacttctcgcaggtccggtcgga 209 Query: 209 gaaggacgcggagctgctgtacgaggccagggattccatcaaagatgaagggaggatgac 268 ||||||||||||||| ||||| || ||||| || ||| || |||| ||| |||||||| Sbjct: 210 gaaggacgcggagcttctgtatgaagccagagaggccacaaaggatggaggaaggatgac 269 Query: 269 aagggaacagtatgcagcgcttcggaggaagattggtggcacctacaaggatttcttcaa 328 || ||| ||||||| ||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 270 aaaggagcagtatggagcacttcggaggaagatcggtggcacctacaaggatttcttcaa 329 Query: 329 gtcatatgttgaagttgatggcgaatacgtggaggaaggttgggtggacaagacctgcaa 388 ||||||||| || ||||| || |||||||| ||||||||||||||||| ||||||||||| Sbjct: 330 gtcatatgtggatgttgacggggaatacgtagaggaaggttgggtggataagacctgcaa 389 Query: 389 agtttgcaagaaagacacaagaggggagccaaggcaagttgacaatctaggaagatat 446 |||||||||||| ||||| |||||||| || ||||| || ||||| |||||||||||| Sbjct: 390 agtttgcaagaaggacactagaggggaacccaggcaggtcgacaagctaggaagatat 447
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 127 bits (64), Expect = 5e-26 Identities = 160/192 (83%) Strand = Plus / Plus Query: 341 agttgatggcgaatacgtggaggaaggttgggtggacaagacctgcaaagtttgcaagaa 400 |||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 35169399 agttgacggggaatacgtagaggaaggttgggtggataagacctgcaaagtttgcaagaa 35169458 Query: 401 agacacaagaggggagccaaggcaagttgacaatctaggaagatatatgcatgtggcgtg 460 ||||| |||||||| || ||||| || ||||| |||||||||||| ||||| || || Sbjct: 35169459 ggacactagaggggaacccaggcaggtcgacaagctaggaagatatgcacatgtcgcatg 35169518 Query: 461 cgcagagaactcgaaaccaacaaacttcttttccaaactcttcggcagatgaacttcttt 520 | |||||| | ||||| || ||| |||| ||||| | |||| |||||||||||| | Sbjct: 35169519 cttggagaacccaaaaccgaccaacatcttcgccaaattgttcgccagatgaacttcaat 35169578 Query: 521 tgtaccatcaaa 532 ||||| |||||| Sbjct: 35169579 tgtacaatcaaa 35169590 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 149 caagcagtccctgtttgggaacatcaccgaggcgctggacttctcgcaggtccggtcgga 208 ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 35168960 caagcagtcattgttcgggagcatcaccgaggcgctggacttctcgcaggtccggtcgga 35169019 Query: 209 gaaggacgcggagctgctgtacgaggccag 238 ||||||||||||||| ||||| || ||||| Sbjct: 35169020 gaaggacgcggagcttctgtatgaagccag 35169049 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 277 agtatgcagcgcttcggaggaagattggtggcacctacaaggatttcttcaagtcatatg 336 |||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 35169222 agtatggagcacttcggaggaagatcggtggcacctacaaggatttcttcaagtcatatg 35169281 Query: 337 t 337 | Sbjct: 35169282 t 35169282 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaaggtg 146 |||||||||| ||||||||||||| Sbjct: 12717053 gaggaggaggaggagaagaaggtg 12717030
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 127 bits (64), Expect = 5e-26 Identities = 160/192 (83%) Strand = Plus / Plus Query: 341 agttgatggcgaatacgtggaggaaggttgggtggacaagacctgcaaagtttgcaagaa 400 |||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 48483 agttgacggggaatacgtagaggaaggttgggtggataagacctgcaaagtttgcaagaa 48542 Query: 401 agacacaagaggggagccaaggcaagttgacaatctaggaagatatatgcatgtggcgtg 460 ||||| |||||||| || ||||| || ||||| |||||||||||| ||||| || || Sbjct: 48543 ggacactagaggggaacccaggcaggtcgacaagctaggaagatatgcacatgtcgcatg 48602 Query: 461 cgcagagaactcgaaaccaacaaacttcttttccaaactcttcggcagatgaacttcttt 520 | |||||| | ||||| || ||| |||| ||||| | |||| |||||||||||| | Sbjct: 48603 cttggagaacccaaaaccgaccaacatcttcgccaaattgttcgccagatgaacttcaat 48662 Query: 521 tgtaccatcaaa 532 ||||| |||||| Sbjct: 48663 tgtacaatcaaa 48674 Score = 123 bits (62), Expect = 8e-25 Identities = 83/90 (92%) Strand = Plus / Plus Query: 149 caagcagtccctgtttgggaacatcaccgaggcgctggacttctcgcaggtccggtcgga 208 ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 48044 caagcagtcattgttcgggagcatcaccgaggcgctggacttctcgcaggtccggtcgga 48103 Query: 209 gaaggacgcggagctgctgtacgaggccag 238 ||||||||||||||| ||||| || ||||| Sbjct: 48104 gaaggacgcggagcttctgtatgaagccag 48133 Score = 97.6 bits (49), Expect = 4e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 277 agtatgcagcgcttcggaggaagattggtggcacctacaaggatttcttcaagtcatatg 336 |||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 48306 agtatggagcacttcggaggaagatcggtggcacctacaaggatttcttcaagtcatatg 48365 Query: 337 t 337 | Sbjct: 48366 t 48366
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 119 agatgaggaggagggggagaagaa 142 |||||||||||||||||||||||| Sbjct: 1900619 agatgaggaggagggggagaagaa 1900642
>gb|AC122147.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0072F04, complete sequence Length = 137724 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 119 agatgaggaggagggggagaagaa 142 |||||||||||||||||||||||| Sbjct: 119072 agatgaggaggagggggagaagaa 119095
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 119 agatgaggaggagggggagaagaa 142 |||||||||||||||||||||||| Sbjct: 1900619 agatgaggaggagggggagaagaa 1900642
>gb|AC153944.3| Mus musculus 10 BAC RP24-292A13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 139203 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaaggtg 146 |||||||||||||||||||||||| Sbjct: 103982 gaggaggagggggagaagaaggtg 104005
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 119 agatgaggaggagggggagaagaa 142 |||||||||||||||||||||||| Sbjct: 1900570 agatgaggaggagggggagaagaa 1900593
>ref|XM_324096.1| Neurospora crassa OR74A predicted protein (NCU04740.1) partial mRNA Length = 1305 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 478 caacaaacttcttttccaaactcttcggcag 508 |||||||||||| ||||| |||||||||||| Sbjct: 736 caacaaacttctcttccatactcttcggcag 706
>ref|XM_955282.1| Neurospora crassa OR74A hypothetical protein (NCU04740.1) partial mRNA Length = 1305 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 478 caacaaacttcttttccaaactcttcggcag 508 |||||||||||| ||||| |||||||||||| Sbjct: 736 caacaaacttctcttccatactcttcggcag 706
>emb|Z94055.1|HS24M15 Human DNA sequence from clone RP1-24M15 on chromosome 1q24-25 Contains part of the TNR gene fortenascin R (restrictin, janusin), complete sequence Length = 134539 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 611 catgtgaaatattttttgatgag 633 ||||||||||||||||||||||| Sbjct: 78481 catgtgaaatattttttgatgag 78503
>emb|AL512594.7| Human DNA sequence from clone RP11-549A6 on chromosome 9 Contains a pseudogene similar to part of a GTPase-activating protein, complete sequence Length = 166192 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 132 ggggagaagaaggtgcccaagcagtccctgt 162 ||||||||||||||| |||||||||||||| Sbjct: 84304 ggggagaagaaggtgagcaagcagtccctgt 84334
>emb|BX897676.1| Neurospora crassa DNA linkage group VI BAC clone B8I24 Length = 83591 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 478 caacaaacttcttttccaaactcttcggcag 508 |||||||||||| ||||| |||||||||||| Sbjct: 73326 caacaaacttctcttccatactcttcggcag 73296
>emb|CR513786.5| Zebrafish DNA sequence from clone CH211-92F19 in linkage group 14, complete sequence Length = 97391 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 113 gaaagcagatgaggaggagggggagaagaag 143 ||||| |||||||||||||| |||||||||| Sbjct: 47517 gaaaggagatgaggaggaggaggagaagaag 47547
>gb|AC159237.2| Mus musculus BAC clone RP24-464G10 from chromosome 12, complete sequence Length = 222209 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 88 ctactaggtcagtcagggcttat 110 ||||||||||||||||||||||| Sbjct: 53257 ctactaggtcagtcagggcttat 53235
>emb|AL596265.12| Mouse DNA sequence from clone RP23-134O19 on chromosome 12, complete sequence Length = 205332 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 117 gcagatgaggaggagggggagaagaag 143 ||||| ||||||||||||||||||||| Sbjct: 76157 gcagaagaggaggagggggagaagaag 76131
>gb|AC127582.4| Mus musculus BAC clone RP24-89J3 from 12, complete sequence Length = 217949 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 88 ctactaggtcagtcagggcttat 110 ||||||||||||||||||||||| Sbjct: 54501 ctactaggtcagtcagggcttat 54523
>gb|AC090426.1| Homo sapiens chromosome 17 clone 205m17 map 17q21.1, complete sequence Length = 138999 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 65076 gaggaggagggggagaagaagg 65097
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence Length = 205378 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 185435 gaggaggagggggagaagaagg 185456
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence Length = 4837408 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 ccctacccagagctcctcattt 41 |||||||||||||||||||||| Sbjct: 3767647 ccctacccagagctcctcattt 3767626
>gb|AC154385.2| Mus musculus BAC clone RP23-23O22 from chromosome 17, complete sequence Length = 221564 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 114 aaagcagatgaggaggagggggagaagaag 143 |||| ||| ||||||||||||||||||||| Sbjct: 40692 aaagaagaggaggaggagggggagaagaag 40721
>gb|AC165245.2| Mus musculus BAC clone RP24-376N22 from chromosome 9, complete sequence Length = 217074 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 134156 gaggaggagggggagaagaagg 134177
>gb|AC134243.3| Mus musculus BAC clone RP24-90E15 from chromosome 17, complete sequence Length = 193151 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Plus Query: 114 aaagcagatgaggaggagggggagaagaag 143 |||| ||| ||||||||||||||||||||| Sbjct: 154826 aaagaagaggaggaggagggggagaagaag 154855
>gb|AC117229.3| Mus musculus BAC clone RP23-380M1 from chromosome 2, complete sequence Length = 187221 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 473 gaaaccaacaaacttcttttcc 494 |||||||||||||||||||||| Sbjct: 102019 gaaaccaacaaacttcttttcc 101998
>gb|AC111044.9| Mus musculus chromosome 10, clone RP23-299H4, complete sequence Length = 165614 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 135673 gaggaggagggggagaagaagg 135652
>gb|AC080112.15| Homo sapiens chromosome 17, clone CTD-2267D19, complete sequence Length = 175014 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 49001 gaggaggagggggagaagaagg 49022
>gb|AC018629.12| Homo sapiens chromosome 17, clone RP11-58O9, complete sequence Length = 166234 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 29745 gaggaggagggggagaagaagg 29724
>gb|AC164004.3| Mus musculus chromosome 5, clone RP23-58C20, complete sequence Length = 198872 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 60381 gaggaggagggggagaagaagg 60360
>emb|AL713994.15| Mouse DNA sequence from clone RP23-378H5 on chromosome 11 Contains the 5' end of the Arf-1 gene for ADP-ribosylation factor 1, the Wnt3a gene for wingless-related MMTV integration site 3A, the Wnt9a gene for wingless-type MMTV integration site 9A, two novel genes, the 5' end of a novel gene and five CpG islands, complete sequence Length = 225396 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 165058 gaggaggagggggagaagaagg 165079
>gb|AC011558.6| Homo sapiens chromosome 19 clone LLNLR-291F12, complete sequence Length = 43128 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 25611 gaggaggagggggagaagaagg 25632
>gb|AC079223.11| Mus musculus chromosome 1, clone RP22-318M10, complete sequence Length = 137729 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 15619 gaggaggagggggagaagaagg 15640
>gb|AC155654.16| Mus musculus 6 BAC RP24-192P21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 147486 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 119 agatgaggaggagggggagaagaagg 144 |||||||||||||| ||||||||||| Sbjct: 67325 agatgaggaggaggaggagaagaagg 67300
>gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome 17, complete sequence Length = 206868 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 119 agatgaggaggagggggagaag 140 |||||||||||||||||||||| Sbjct: 92128 agatgaggaggagggggagaag 92149
>gb|AC127372.3| Mus musculus BAC clone RP23-37F11 from chromosome 8, complete sequence Length = 175472 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 151562 gaggaggagggggagaagaagg 151541
>emb|AL928798.20| Mouse DNA sequence from clone RP23-7A19 on chromosome 2, complete sequence Length = 192734 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 473 gaaaccaacaaacttcttttcc 494 |||||||||||||||||||||| Sbjct: 23522 gaaaccaacaaacttcttttcc 23543
>gb|AC153915.5| Mus musculus 10 BAC RP23-329D23 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207169 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 119 agatgaggaggagggggagaagaagg 144 |||||||||||||| ||||||||||| Sbjct: 206253 agatgaggaggaggaggagaagaagg 206278
>gb|AC140277.3| Mus musculus BAC clone RP23-336O18 from 5, complete sequence Length = 198919 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 190064 gaggaggagggggagaagaagg 190043
>gb|AC147085.3| Mus musculus BAC clone RP23-356J12 from 8, complete sequence Length = 209306 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 149430 gaggaggagggggagaagaagg 149451
>emb|CT009732.8| Mouse DNA sequence from clone RP23-72O20 on chromosome 9, complete sequence Length = 239257 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 54184 gaggaggagggggagaagaagg 54205
>gb|AC158559.7| Mus musculus chromosome 1, clone RP24-300L5, complete sequence Length = 169324 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaagg 144 |||||||||||||||||||||| Sbjct: 36709 gaggaggagggggagaagaagg 36730
>gb|AC102343.8| Mus musculus chromosome 3, clone RP23-254H18, complete sequence Length = 220876 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 163036 gaggaggagggggagaagaag 163016
>gb|AC121832.3| Mus musculus chromosome 10 clone RP24-67D23, complete sequence Length = 172348 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 3711 gaggaggagggggagaagaag 3731
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaagg 144 |||||||||||||||||||| |||| Sbjct: 795846 gatgaggaggagggggagaacaagg 795870
>gb|AC163676.4| Mus musculus BAC clone RP24-81A22 from chromosome 3, complete sequence Length = 223760 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 130120 gaggaggagggggagaagaag 130100
>gb|AC131593.16| Mus musculus chromosome 3, clone RP24-566M9, complete sequence Length = 143352 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 24762 gaggaggagggggagaagaag 24742
>gb|AC139211.13| Mus musculus chromosome 6, clone RP23-302O24, complete sequence Length = 154129 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 gaaagcagatgaggaggaggg 133 ||||||||||||||||||||| Sbjct: 59222 gaaagcagatgaggaggaggg 59242
>gb|AC101559.20| Mus musculus chromosome 5, clone RP23-194K16, complete sequence Length = 252554 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 194083 gaggaggagggggagaagaag 194063
>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178502 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 162568 gaggaggagggggagaagaag 162548
>gb|AC165238.5| Mus musculus chromosome 3, clone RP23-466A3, complete sequence Length = 180939 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 143072 gaggaggagggggagaagaag 143092
>gb|BC039276.1| Mus musculus pleckstrin homology domain containing, family F (with FYVE domain) member 2, mRNA (cDNA clone MGC:36376 IMAGE:4987735), complete cds Length = 2892 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 gattccatcaaagatgaaggg 260 ||||||||||||||||||||| Sbjct: 454 gattccatcaaagatgaaggg 474
>gb|AC138548.8| Mus musculus chromosome 3, clone RP24-210N9, complete sequence Length = 155964 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 54402 gaggaggagggggagaagaag 54422
>ref|XM_382069.1| Gibberella zeae PH-1 chromosome 1 conserved hypothetical protein (FG01893.1) partial mRNA Length = 2478 Score = 42.1 bits (21), Expect = 2.2 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 117 gcagatgaggaggaggg-ggagaagaagg 144 ||||||||||||||||| ||||||||||| Sbjct: 607 gcagatgaggaggagggtggagaagaagg 635
>gb|AC127248.3| Mus musculus BAC clone RP24-442E2 from chromosome 5, complete sequence Length = 176488 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 115265 gaggaggagggggagaagaag 115285
>ref|XM_567746.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK02720) partial mRNA Length = 4178 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaagg 144 |||||||||||||||||||| |||| Sbjct: 1533 gatgaggaggagggggagaacaagg 1557
>gb|AC124400.4| Mus musculus BAC clone RP24-357O21 from chromosome 14, complete sequence Length = 191219 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 gattccatcaaagatgaaggg 260 ||||||||||||||||||||| Sbjct: 90762 gattccatcaaagatgaaggg 90782
>gb|AC122879.3| Mus musculus BAC clone RP23-76C10 from 1, complete sequence Length = 250884 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 234680 gaggaggagggggagaagaag 234660
>gb|AC164704.4| Mus musculus BAC clone RP23-238D20 from chromosome 6, complete sequence Length = 189119 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 ctctcgctctttcccctaccc 27 ||||||||||||||||||||| Sbjct: 131699 ctctcgctctttcccctaccc 131719
>gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosome 9, complete sequence Length = 191274 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 106050 gaggaggagggggagaagaag 106070
>emb|AL590302.6| Human DNA sequence from clone RP11-252P19 on chromosome 6 Contains 2 novel genes and 3 CpG islands, complete sequence Length = 105898 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaagg 144 ||||||||||||| ||||||||||| Sbjct: 6972 gatgaggaggaggaggagaagaagg 6996
>emb|AL445650.9| Human DNA sequence from clone RP11-152K20 on chromosome 1 Contains the 5' end of the USH2A gene for Usher syndrome 2A (autosomal recessive, mild) and the 3' end of the ESRRG gene for estrogen-related receptor gamma, complete sequence Length = 153705 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 80412 gaggaggagggggagaagaag 80432
>gb|BC040216.1| Mus musculus dynein heavy chain-related, mRNA (cDNA clone IMAGE:5363263), with apparent retained intron Length = 5542 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 5321 gaggaggagggggagaagaag 5341
>emb|AL805940.7| Mouse DNA sequence from clone RP24-286B19 on chromosome 4, complete sequence Length = 128829 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 89195 gaggaggagggggagaagaag 89215
>gb|BC016134.1| Mus musculus pleckstrin homology domain containing, family F (with FYVE domain) member 2, mRNA (cDNA clone MGC:28979 IMAGE:4503757), complete cds Length = 2897 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 gattccatcaaagatgaaggg 260 ||||||||||||||||||||| Sbjct: 444 gattccatcaaagatgaaggg 464
>gb|AC010117.6| Drosophila melanogaster 3L BAC RP98-21J2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178965 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 613 tgtgaaatattttttgatgag 633 ||||||||||||||||||||| Sbjct: 147942 tgtgaaatattttttgatgag 147922
>gb|AC009840.7| Drosophila melanogaster 3L BAC RP98-2B14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194790 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 613 tgtgaaatattttttgatgag 633 ||||||||||||||||||||| Sbjct: 171968 tgtgaaatattttttgatgag 171988
>gb|AC073358.14| Homo sapiens 3 BAC RP11-501M7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164078 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 aggaggagggggagaagaagg 144 ||||||||||||||||||||| Sbjct: 82730 aggaggagggggagaagaagg 82710
>dbj|AK154634.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630101M03 product:pleckstrin homology domain containing, family F (with FYVE domain) member 2, full insert sequence Length = 1964 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 gattccatcaaagatgaaggg 260 ||||||||||||||||||||| Sbjct: 494 gattccatcaaagatgaaggg 514
>emb|AL512584.13| Mouse DNA sequence from clone RP23-232D1 on chromosome 2, complete sequence Length = 141386 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 5537 gaggaggagggggagaagaag 5517
>gb|AC125310.5| Mus musculus BAC clone RP24-548E5 from chromosome 1, complete sequence Length = 223534 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 217892 gaggaggagggggagaagaag 217912
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ccgaggcgctggacttctcgc 195 ||||||||||||||||||||| Sbjct: 1358734 ccgaggcgctggacttctcgc 1358714
>dbj|AK033666.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130213H04 product:CDNA FLJ13187 FIS, CLONE NT2RP3004242, WEAKLY SIMILAR TO PUTATIVE RHO/RAC GUANINE NUCLEOTIDE EXCHANGE FACTOR (HYPOTHETICAL 27.8 KDA PROTEIN) homolog [Homo sapiens], full insert sequence Length = 2228 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 gattccatcaaagatgaaggg 260 ||||||||||||||||||||| Sbjct: 497 gattccatcaaagatgaaggg 517
>gb|AC158651.12| Mus musculus BAC RP24-68I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190089 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 63490 gaggaggagggggagaagaag 63470
>gb|AC132660.7| Homo sapiens 3 BAC RP11-482K2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 64263 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 51631 gaggaggagggggagaagaag 51611
>gb|AC138229.16| Mus musculus chromosome 1, clone RP23-399N18, complete sequence Length = 211732 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 130062 gaggaggagggggagaagaag 130042
>gb|AF089023.1|AF089023 Euphagus carolinus cytochrome b (cytb) gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 888 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 356 cgtggaggaaggttgggtggacaag 380 |||||||||||||| |||||||||| Sbjct: 487 cgtggaggaaggttaggtggacaag 463
>gb|AC013622.12| Mus musculus chromosome 5, clone RP23-232H18, complete sequence Length = 240821 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 130484 gaggaggagggggagaagaag 130504
>gb|AE003591.4| Drosophila melanogaster chromosome 3L, section 72 of 83 of the complete sequence Length = 301136 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 613 tgtgaaatattttttgatgag 633 ||||||||||||||||||||| Sbjct: 221260 tgtgaaatattttttgatgag 221280
>emb|CT486006.6| Mouse DNA sequence from clone RP23-433C10 on chromosome 9, complete sequence Length = 208668 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 109339 gaggaggagggggagaagaag 109319
>emb|AL732497.15| Mouse DNA sequence from clone RP23-130H14 on chromosome 4, complete sequence Length = 208663 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 gattccatcaaagatgaaggg 260 ||||||||||||||||||||| Sbjct: 86024 gattccatcaaagatgaaggg 86004
>emb|AL844852.11| Mouse DNA sequence from clone RP23-260N23 on chromosome 2, complete sequence Length = 257676 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 246251 gaggaggagggggagaagaag 246271
>gb|AC144774.3| Mus musculus BAC clone RP24-128I18 from 6, complete sequence Length = 143838 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 ctctcgctctttcccctaccc 27 ||||||||||||||||||||| Sbjct: 132005 ctctcgctctttcccctaccc 131985
>gb|AC122486.4| Mus musculus BAC clone RP24-380B9 from 12, complete sequence Length = 128253 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 aggaggagggggagaagaagg 144 ||||||||||||||||||||| Sbjct: 96379 aggaggagggggagaagaagg 96359
>ref|NM_175175.3| Mus musculus pleckstrin homology domain containing, family F (with FYVE domain) member 2 (Plekhf2), mRNA Length = 2897 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 240 gattccatcaaagatgaaggg 260 ||||||||||||||||||||| Sbjct: 444 gattccatcaaagatgaaggg 464
>gb|AC164643.4| Mus musculus BAC clone RP23-254F23 from chromosome 7, complete sequence Length = 232098 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 117219 gaggaggagggggagaagaag 117199
>gb|AC165153.2| Mus musculus BAC clone RP23-359L1 from chromosome 17, complete sequence Length = 219548 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 40063 gaggaggagggggagaagaag 40083
>emb|AL627105.13| Mouse DNA sequence from clone RP23-383D12 on chromosome 4, complete sequence Length = 190882 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaag 143 ||||||||||||||||||||| Sbjct: 54679 gaggaggagggggagaagaag 54699
>emb|AL928738.8| Mouse DNA sequence from clone RP23-76M15 on chromosome 4, complete sequence Length = 188568 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 248 caaagatgaagggaggatgacaagg 272 ||||||||||| ||||||||||||| Sbjct: 63432 caaagatgaagagaggatgacaagg 63456
>gb|AC153581.18| Mus musculus 6 BAC RP23-111F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208262 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 atgaggaggagggggagaag 140 |||||||||||||||||||| Sbjct: 59388 atgaggaggagggggagaag 59369
>ref|NM_115487.3| Arabidopsis thaliana unknown protein AT3G56290 mRNA, complete cds Length = 753 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 336 gttgaagttgatggcgaatacgtggaggaaggttgggtggacaa 379 |||||||| ||||| |||| |||||||| || ||||||||||| Sbjct: 373 gttgaagtggatgggcaatatgtggaggagggatgggtggacaa 416
>gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OABb-289A1, complete sequence Length = 109794 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 gatgaggaggagggggagaagaag 143 ||||| |||||||||||||||||| Sbjct: 33653 gatgaagaggagggggagaagaag 33630
>ref|XM_512314.1| PREDICTED: Pan troglodytes similar to general transcription factor IIF, polypeptide 1, 74kDa; general transcription factor IIF, polypeptide 1 (74kD subunit) (LOC455639), mRNA Length = 2391 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaaggtgccca 150 |||||||||| ||||||||||| ||||| Sbjct: 1717 gaggaggaggaggagaagaaggcgccca 1744
>ref|XM_471715.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 759 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggaggagggggagaagaagg 144 |||||||||||||||||||| Sbjct: 207 ggaggagggggagaagaagg 226
>gb|AY665795.1| Cynomys ludovicianus clone A115 microsatellite sequence Length = 690 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 caagcagtccctgtttggga 168 |||||||||||||||||||| Sbjct: 624 caagcagtccctgtttggga 605
>gb|AF030453.1| Homo sapiens chromosome 7 clone PAC 76h2 map 7q22, complete sequence Length = 125108 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 acgtggaggaaggttgggtg 374 |||||||||||||||||||| Sbjct: 17021 acgtggaggaaggttgggtg 17040
>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence Length = 1608198 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 gaaaccaacaaacttctttt 492 |||||||||||||||||||| Sbjct: 1065976 gaaaccaacaaacttctttt 1065995
>gb|BT020716.1| Bos taurus general transcription factor IIF, polypeptide 1, 74kDa (GTF2F1), mRNA, complete cds Length = 1788 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaaggtgccca 150 |||||||||| ||||||||||| ||||| Sbjct: 1166 gaggaggaggaggagaagaaggcgccca 1193
>gb|AC003676.1| Homo sapiens chromosome 2, P1 clone 777H5 (LBNL H27), complete sequence Length = 86894 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 71667 gaggaggagggggagaagaa 71686
>gb|AC113585.4| Trypanosoma brucei chromosome 5 clone RPCI93-27M3, complete sequence Length = 127380 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 gaaaccaacaaacttctttt 492 |||||||||||||||||||| Sbjct: 107977 gaaaccaacaaacttctttt 107996
>gb|AC094749.8| Rattus norvegicus 1 BAC CH230-5H10 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 77448 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aggaggagggggagaagaag 143 |||||||||||||||||||| Sbjct: 37792 aggaggagggggagaagaag 37773 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aggaggagggggagaagaag 143 |||||||||||||||||||| Sbjct: 37771 aggaggagggggagaagaag 37752
>gb|AC121292.9| Mus musculus chromosome 1, clone RP23-172B15, complete sequence Length = 193192 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 atgaggaggagggggagaagaagg 144 |||||||||||| ||||||||||| Sbjct: 122475 atgaggaggaggaggagaagaagg 122452
>ref|XM_594493.2| PREDICTED: Bos taurus calcium channel, voltage-dependent, alpha 1E subunit (CACNA1E), partial mRNA Length = 6542 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 2813 gatgaggaggaggtggagaagaag 2836
>ref|XM_601826.2| PREDICTED: Bos taurus similar to type IV alpha 6 collagen isoform A precursor (LOC523526), mRNA Length = 4990 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gaggccagggattccatcaa 250 |||||||||||||||||||| Sbjct: 4065 gaggccagggattccatcaa 4046
>ref|XM_363197.1| Magnaporthe grisea 70-15 hypothetical protein (MG08781.4) partial cds Length = 567 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 agctgctgtacgaggccagg 239 |||||||||||||||||||| Sbjct: 223 agctgctgtacgaggccagg 204
>ref|XM_323481.1| Neurospora crassa OR74A hypothetical protein ( (AL513463) heat shock protein 80 [Neurospora crassa OR74A] ) (NCU04142.1) partial mRNA Length = 2118 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 721 gatgaggaggaggaggagaagaag 744
>ref|XM_953179.1| Neurospora crassa OR74A hypothetical protein (NCU07578.1) partial mRNA Length = 1344 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 aaagcagatgaggaggagggggag 137 |||||||| ||||||||||||||| Sbjct: 497 aaagcagaagaggaggagggggag 474
>ref|XM_956205.1| Neurospora crassa OR74A hypothetical protein ( (AL513463) heat shock protein 80 [Neurospora crassa OR74A] ) (NCU04142.1) partial mRNA Length = 2118 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 721 gatgaggaggaggaggagaagaag 744
>ref|XM_327863.1| Neurospora crassa OR74A hypothetical protein (NCU07578.1) partial mRNA Length = 1344 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 aaagcagatgaggaggagggggag 137 |||||||| ||||||||||||||| Sbjct: 497 aaagcagaagaggaggagggggag 474
>ref|NM_000721.2| Homo sapiens calcium channel, voltage-dependent, alpha 1E subunit (CACNA1E), mRNA Length = 9734 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 3484 gatgaggaggaggtggagaagaag 3507
>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15, complete sequence Length = 149035 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 50325 gaggaggagggggagaagaa 50306
>gb|AC122282.5| Mus musculus BAC clone RP23-240B12 from chromosome 5, complete sequence Length = 227388 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aggaggagggggagaagaag 143 |||||||||||||||||||| Sbjct: 204798 aggaggagggggagaagaag 204817
>gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, complete sequence Length = 159429 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaaggtg 146 |||||||||| ||||||||||||| Sbjct: 79089 gaggaggaggaggagaagaaggtg 79112
>gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, complete sequence Length = 187598 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaaggtg 146 |||||||||| ||||||||||||| Sbjct: 120704 gaggaggaggaggagaagaaggtg 120727
>gb|AC121279.7| Mus musculus chromosome 3, clone RP23-4F17, complete sequence Length = 207763 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 tcaagtcatatgttgaagtt 344 |||||||||||||||||||| Sbjct: 7582 tcaagtcatatgttgaagtt 7563
>gb|AC164091.3| Mus musculus BAC clone RP23-97M20 from chromosome 3, complete sequence Length = 218807 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 473 gaaaccaacaaacttctttt 492 |||||||||||||||||||| Sbjct: 101151 gaaaccaacaaacttctttt 101170
>gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosome 17, complete sequence Length = 184296 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 |||||||||||||||||| ||||| Sbjct: 62565 gatgaggaggagggggaggagaag 62588
>gb|AC114011.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078f20, complete sequence Length = 151042 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 150161 gaggaggagggggagaagaa 150142
>gb|AC116593.4| Mus musculus BAC clone RP24-91C7 from chromosome 8, complete sequence Length = 174603 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 30679 gaggaggagggggagaagaa 30660
>gb|AC005088.3| Homo sapiens BAC clone CTA-313A17 from 7, complete sequence Length = 158663 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 acgtggaggaaggttgggtg 374 |||||||||||||||||||| Sbjct: 51950 acgtggaggaaggttgggtg 51969
>gb|AC093734.3| Homo sapiens BAC clone RP11-16P10 from 7, complete sequence Length = 114085 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggaggagggggagaagaagg 144 |||||||||||||||||||| Sbjct: 13000 ggaggagggggagaagaagg 12981
>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence Length = 153903 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aggaggagggggagaagaag 143 |||||||||||||||||||| Sbjct: 109525 aggaggagggggagaagaag 109506
>gb|DQ483781.1| Gymnogyps californianus clone 204F microsatellite sequence Length = 583 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 atgaggaggagggggagaagaagg 144 ||||||||||||||||| |||||| Sbjct: 234 atgaggaggagggggaggagaagg 257
>ref|XM_533935.2| PREDICTED: Canis familiaris similar to Transcription initiation factor IIF alpha subunit (TFIIF-alpha) (Transcription initiation factor RAP74) (General transcription factor IIF polypeptide 1 74 kDa subunit protein) (LOC476731), mRNA Length = 1896 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaaggtgccca 150 |||||||||| ||||||||||| ||||| Sbjct: 1267 gaggaggaggaggagaagaaggcgccca 1294
>ref|XM_820621.1| Trypanosoma brucei TREU927 clone RPCI93-27M3 50S ribosomal protein L2 (Tb927.5.3360) partial mRNA Length = 1236 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 473 gaaaccaacaaacttctttt 492 |||||||||||||||||||| Sbjct: 615 gaaaccaacaaacttctttt 596
>gb|AC125528.4| Mus musculus BAC clone RP23-365I9 from chromosome 15, complete sequence Length = 197376 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 agatgaggaggagggggagaagaa 142 ||||||||||||||||||| |||| Sbjct: 90482 agatgaggaggagggggaggagaa 90505
>gb|AC122488.3| Mus musculus BAC clone RP24-383B2 from chromosome 17, complete sequence Length = 206003 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaaggtg 146 |||||||||| ||||||||||||| Sbjct: 3162 gaggaggaggaggagaagaaggtg 3139
>gb|AC125404.4| Mus musculus BAC clone RP23-10A1 from 12, complete sequence Length = 209092 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 5728 gaggaggagggggagaagaa 5747
>gb|AC073886.4| Homo sapiens BAC clone RP11-101N13 from 7, complete sequence Length = 112568 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaaggtg 146 |||||||||| ||||||||||||| Sbjct: 38675 gaggaggaggaggagaagaaggtg 38652
>gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, complete sequence Length = 214229 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 atgaggaggagggggagaag 140 |||||||||||||||||||| Sbjct: 169357 atgaggaggagggggagaag 169338
>gb|AC005998.3| Homo sapiens PAC clone RP4-622E21 from 7, complete sequence Length = 96556 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 aagaaagacacaagagggga 415 |||||||||||||||||||| Sbjct: 25618 aagaaagacacaagagggga 25599
>gb|AC113524.9| Mus musculus chromosome 6, clone RP23-120I17, complete sequence Length = 216807 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 atgaggaggagggggagaag 140 |||||||||||||||||||| Sbjct: 126235 atgaggaggagggggagaag 126254
>gb|AC165343.3| Mus musculus BAC clone RP23-476C24 from chromosome 17, complete sequence Length = 190724 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaaggtg 146 |||||||||| ||||||||||||| Sbjct: 99410 gaggaggaggaggagaagaaggtg 99387
>gb|AC133425.3| Rattus norvegicus 7 BAC CH230-333I12 (Children's Hospital Oakland Research Institute) complete sequence Length = 64809 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aggaggagggggagaagaag 143 |||||||||||||||||||| Sbjct: 25645 aggaggagggggagaagaag 25626
>emb|Z99495.1|HS441J1 Human DNA sequence from clone RP3-441J1 on chromosome 6p24 Contains the 5' end of gene KIAA1733, complete sequence Length = 151213 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 gttgtccatgtgaaatattt 624 |||||||||||||||||||| Sbjct: 74237 gttgtccatgtgaaatattt 74256
>ref|XM_794857.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC577282 (LOC577282), mRNA Length = 465 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 113 gaaagcagatgaggaggagggggagaagaagg 144 |||||| || |||||||| ||||||||||||| Sbjct: 135 gaaagcggaggaggaggaaggggagaagaagg 166
>emb|AL590998.7| Human DNA sequence from clone RP4-677A15 on chromosome 1 Contains parrt of the CACNA1E gene for calcium channel voltage-dependent alpha 1E subunit, complete sequence Length = 102196 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 75077 gatgaggaggaggtggagaagaag 75100
>emb|AL359928.11| Human DNA sequence from clone RP11-80D19 on chromosome 1, complete sequence Length = 63855 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 aagttgacaatctaggaagatata 447 ||||||||||| |||||||||||| Sbjct: 11393 aagttgacaatttaggaagatata 11370
>emb|AL157768.6| Human DNA sequence from clone RP11-481A22 on chromosome 13, complete sequence Length = 145603 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 600 aatgtgttgtccatgtgaaatatt 623 |||||||| ||||||||||||||| Sbjct: 12174 aatgtgttatccatgtgaaatatt 12197
>gb|AC119420.12| Mus musculus strain 129S6/SvEvTac clone rp22-121i21 map 11, complete sequence Length = 168186 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 156638 gatgaggaggaggaggagaagaag 156661
>emb|AL078590.28|HSA557H15 Human DNA sequence from clone RP11-557H15 on chromosome 6q23.1-23.3 Contains three novel genes, the 3' part of a novel gene and a member A1 of family with sequence similarity 8 (FAM8A1) pseudogene, complete sequence Length = 195021 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 103621 gaggaggagggggagaagaa 103640
>emb|AL031650.22|HS1018D12 Human DNA sequence from clone RP5-1018D12 on chromosome 20q11.1-11.22 Contains part of a CDK5 regulatory subunit associated protein 3 (CDK5RAP3) pseudogene, the RPL31P3 gene for ribosomal protein L31 pseudogene 3, a novel pseudogene, the DEFB118 gene for defensin beta 118 and the 3' end of the the DEFB119 gene for defensin beta 119, complete sequence Length = 98490 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aggaggagggggagaagaag 143 |||||||||||||||||||| Sbjct: 44868 aggaggagggggagaagaag 44887
>gb|AC068909.31| Mus musculus BAC Clone 407f20 RPCI-23, complete sequence Length = 196383 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggaggagggggagaagaagg 144 |||||||||||||||||||| Sbjct: 185285 ggaggagggggagaagaagg 185266
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 521 tgtaccatcaaacccgatgttgtt 544 ||||||||||| |||||||||||| Sbjct: 2540396 tgtaccatcaatcccgatgttgtt 2540373
>emb|AL513463.1|NC9G6 Neurospora crassa DNA linkage group V Cosmid contig 9G6 Length = 125561 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 62406 gatgaggaggaggaggagaagaag 62383
>emb|AL606482.14| Mouse DNA sequence from clone RP23-360H16 on chromosome 11 Contains the genes for olfactory receptors MOR135-7, -8, -10 and -28, three olfactory receptor MOR135 pseudogenes, and the gene for olfactory receptor MOR157-1, complete sequence Length = 199115 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 146333 gatgaggaggaggaggagaagaag 146310
>gb|AC094105.3| Homo sapiens chromosome 5 clone RP11-468D11, complete sequence Length = 186314 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 agatgaggaggagggggagaagaa 142 |||||||||||||| ||||||||| Sbjct: 35203 agatgaggaggaggaggagaagaa 35226
>emb|AL450406.17| Mouse DNA sequence from clone RP23-262J21 on chromosome 13 Contains two serine (or cysteine) proteinase inhibitor clade B (Serpinb) pseudogenes, a G protein-coupled receptor family C (Gprc) pseudogene, a vomeronasal 2 receptor (V2r) or Gprc group 2 member A related sequence (Gprc2a-rs) pseudogene, two genes for novel Serpinb members, the Serpinb6 gene for serine (or cysteine) proteinase inhibitor clade B member 6 and a CpG island, complete sequence Length = 213270 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 604 tgttgtccatgtgaaatatt 623 |||||||||||||||||||| Sbjct: 120350 tgttgtccatgtgaaatatt 120369
>gb|BC045562.1| Homo sapiens cDNA clone IMAGE:4815142 Length = 3092 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 acgtggaggaaggttgggtg 374 |||||||||||||||||||| Sbjct: 1855 acgtggaggaaggttgggtg 1874
>gb|BC040199.1| Homo sapiens cDNA clone IMAGE:4816860 Length = 3212 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 acgtggaggaaggttgggtg 374 |||||||||||||||||||| Sbjct: 1972 acgtggaggaaggttgggtg 1991
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence Length = 796348 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 atgaggaggagggggagaagaagg 144 |||||||||||| ||||||||||| Sbjct: 429285 atgaggaggaggaggagaagaagg 429262
>gb|AC112673.7| Homo sapiens chromosome 8, clone RP11-212F11, complete sequence Length = 167547 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 cctgcaaagtttgcaagaaa 401 |||||||||||||||||||| Sbjct: 18546 cctgcaaagtttgcaagaaa 18565
>gb|AY081675.1| Arabidopsis thaliana putative protein (At3g56290) mRNA, complete cds Length = 655 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 336 gttgaagttgatggcgaatacgtggaggaaggttgggtggacaa 379 |||||||| ||||| |||| |||||||| || ||||||||||| Sbjct: 346 gttgaagtggatgggcaatatgtggaggagggatgggtggacaa 389
>gb|AC009093.10| Homo sapiens chromosome 16 clone RP11-426C22, complete sequence Length = 207997 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ggagaagaaggtgcccaagc 153 |||||||||||||||||||| Sbjct: 63525 ggagaagaaggtgcccaagc 63544
>gb|AC011405.6| Homo sapiens chromosome 5 clone CTB-46B19, complete sequence Length = 184541 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 617 aaatattttttgatgagcatatat 640 ||||||||| |||||||||||||| Sbjct: 136810 aaatattttatgatgagcatatat 136833
>gb|AY062503.1| Arabidopsis thaliana putative protein (At3g56290; F18O21_250) mRNA, complete cds Length = 744 Score = 40.1 bits (20), Expect = 8.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 336 gttgaagttgatggcgaatacgtggaggaaggttgggtggacaa 379 |||||||| ||||| |||| |||||||| || ||||||||||| Sbjct: 373 gttgaagtggatgggcaatatgtggaggagggatgggtggacaa 416
>gb|AC157498.2| Pan troglodytes BAC clone CH251-412M6 from chromosome unknown, complete sequence Length = 159994 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||| |||||||||||| Sbjct: 154324 gatgaggaggaaggggagaagaag 154347
>gb|AC154751.2| Mus musculus BAC clone RP24-399L21 from chromosome 14, complete sequence Length = 176992 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 atgaggaggagggggagaagaagg 144 |||||||||| ||||||||||||| Sbjct: 14082 atgaggaggatggggagaagaagg 14059
>gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene, complete cds, alternatively spliced Length = 379048 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 cctgcaaagtttgcaagaaa 401 |||||||||||||||||||| Sbjct: 364927 cctgcaaagtttgcaagaaa 364908
>gb|AC092233.1|AC092233 Drosophila melanogaster, chromosome 2L, region 30F-31B, BAC clone BACR29P12, complete sequence Length = 161446 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaaggtg 146 ||||||||||||||| |||||||| Sbjct: 73752 gaggaggagggggaggagaaggtg 73729
>gb|AC010409.6|AC010409 Homo sapiens chromosome 5 clone CTD-2158P22, complete sequence Length = 117334 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 113 gaaagcagatgaggaggagggggagaagaagg 144 ||||| ||| ||||||||||||||| |||||| Sbjct: 80026 gaaagaagaggaggaggagggggaggagaagg 79995
>gb|AF212996.1|AF212996 Neurospora crassa heat shock protein 80 gene, complete cds Length = 3556 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 1923 gatgaggaggaggaggagaagaag 1946
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggaggagggggagaagaagg 144 |||||||||||||||||||| Sbjct: 13660752 ggaggagggggagaagaagg 13660771
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 16409726 gaggaggagggggagaagaa 16409707
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gaaagcagatgaggaggagg 132 |||||||||||||||||||| Sbjct: 23838280 gaaagcagatgaggaggagg 23838299
>dbj|AB197319.1| Uncultured bacterium C23O gene for catechol 2,3-dioxygenase, partial cds, clone: R2-375-103b Length = 375 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 tcaccgaggcgctggacttc 191 |||||||||||||||||||| Sbjct: 75 tcaccgaggcgctggacttc 94
>gb|AC104599.4| Homo sapiens BAC clone RP11-652K9 from 2, complete sequence Length = 80146 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 46470 gaggaggagggggagaagaa 46451
>gb|AC079895.7| Homo sapiens BAC clone RP11-749M12 from 2, complete sequence Length = 149309 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 35604 gaggaggagggggagaagaa 35585
>gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, complete sequence Length = 199917 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 99380 gaggaggagggggagaagaa 99361
>gb|AC154838.2| Mus musculus BAC clone RP23-64F2 from chromosome 14, complete sequence Length = 224431 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaaggtg 146 ||||||||||||||| |||||||| Sbjct: 34881 gaggaggagggggaggagaaggtg 34858
>gb|AC156835.2| Mus musculus BAC clone RP23-322L4 from chromosome 9, complete sequence Length = 216124 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 605 gttgtccatgtgaaatattt 624 |||||||||||||||||||| Sbjct: 150373 gttgtccatgtgaaatattt 150354
>gb|AC154245.2| Mus musculus BAC clone RP24-326A24 from chromosome 14, complete sequence Length = 185892 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 atgaggaggagggggagaagaagg 144 |||||||||| ||||||||||||| Sbjct: 37487 atgaggaggatggggagaagaagg 37510
>gb|AC155820.2| Mus musculus BAC clone RP23-360J10 from chromosome 10, complete sequence Length = 221801 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 aagcagatgaggaggagggg 134 |||||||||||||||||||| Sbjct: 123648 aagcagatgaggaggagggg 123629
>gb|AC133282.7| Mus musculus chromosome 15, clone RP24-408B1, complete sequence Length = 183129 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 83805 gaggaggagggggagaagaa 83824
>ref|NM_001015527.1| Bos taurus general transcription factor IIF, polypeptide 1, 74kDa (GTF2F1), mRNA Length = 1788 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaaggtgccca 150 |||||||||| ||||||||||| ||||| Sbjct: 1166 gaggaggaggaggagaagaaggcgccca 1193
>gb|AC134312.3| Homo sapiens chromosome 16 clone RP11-863P13, complete sequence Length = 205610 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ggagaagaaggtgcccaagc 153 |||||||||||||||||||| Sbjct: 94581 ggagaagaaggtgcccaagc 94600
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 acatcaccgaggcgctggac 188 |||||||||||||||||||| Sbjct: 6749797 acatcaccgaggcgctggac 6749816
>gb|AC127455.4| Homo sapiens chromosome 16 clone CTD-3057O21, complete sequence Length = 184641 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 134 ggagaagaaggtgcccaagc 153 |||||||||||||||||||| Sbjct: 2107 ggagaagaaggtgcccaagc 2088
>gb|AC092758.3| Papio anubis clone RP41-22J16, complete sequence Length = 171690 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggaggagggggagaagaagg 144 |||||||||||||||||||| Sbjct: 33140 ggaggagggggagaagaagg 33159
>gb|AC010629.8| Homo sapiens chromosome 5 clone CTD-2213L16, complete sequence Length = 82882 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 60004 gatgaggaggaggaggagaagaag 60027
>dbj|AP002869.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0554D10 Length = 158723 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaaggtg 146 |||||||||| ||||||||||||| Sbjct: 84082 gaggaggaggaggagaagaaggtg 84059
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gaaagcagatgaggaggagg 132 |||||||||||||||||||| Sbjct: 59946 gaaagcagatgaggaggagg 59965
>emb|BX323545.11| Mouse DNA sequence from clone RP23-358N13 on chromosome 4, complete sequence Length = 47574 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gaaagcagatgaggaggagg 132 |||||||||||||||||||| Sbjct: 11145 gaaagcagatgaggaggagg 11164
>dbj|AK120056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000O15, full insert sequence Length = 1895 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaaggtg 146 |||||||||| ||||||||||||| Sbjct: 78 gaggaggaggaggagaagaaggtg 55
>gb|AF223391.1|AF239258S3 Homo sapiens calcium channel alpha1E subunit (CACNA1E) gene, exons 7-49, and partial cds, alternatively spliced Length = 316704 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 132566 gatgaggaggaggtggagaagaag 132589
>gb|AC002479.1|AC002479 Human BAC clone GS1-9G13 from 5p15.2, complete sequence Length = 88682 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 24407 gatgaggaggaggaggagaagaag 24430
>dbj|AK108051.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-H02, full insert sequence Length = 1184 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggaggagggggagaagaagg 144 |||||||||||||||||||| Sbjct: 426 ggaggagggggagaagaagg 445
>dbj|AK105168.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-F02, full insert sequence Length = 801 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaaggtg 146 |||||||||| ||||||||||||| Sbjct: 77 gaggaggaggaggagaagaaggtg 54
>gb|AC154040.7| Mus musculus 10 BAC RP23-348E15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210862 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 151601 gaggaggagggggagaagaa 151620
>gb|AF151527.1|AF151527 Hyphantria cunea serpin gene, complete cds Length = 18665 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 agttgacaatctaggaagatatat 448 |||||||||||||| ||||||||| Sbjct: 7227 agttgacaatctagcaagatatat 7250
>gb|AE003627.4| Drosophila melanogaster chromosome 2L, section 36 of 83 of the complete sequence Length = 264225 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaaggtg 146 ||||||||||||||| |||||||| Sbjct: 174616 gaggaggagggggaggagaaggtg 174639
>gb|AC005666.1|AC005666 Homo sapiens chromosome 17, clone hRPK.112_H_10, complete sequence Length = 158905 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggaggagggggagaagaagg 144 |||||||||||||||||||| Sbjct: 76710 ggaggagggggagaagaagg 76729
>gb|AC005734.1|AC005734 Drosophila melanogaster DNA sequence (P1s DS00058 (D296), DS02068 (D297), and DS07249 (D318)), complete sequence Length = 155335 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 gaggaggagggggagaagaaggtg 146 ||||||||||||||| |||||||| Sbjct: 112909 gaggaggagggggaggagaaggtg 112932
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gaggaggagggggagaagaa 142 |||||||||||||||||||| Sbjct: 16500730 gaggaggagggggagaagaa 16500711
>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09, complete sequence Length = 187359 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggaggagggggagaagaagg 144 |||||||||||||||||||| Sbjct: 55360 ggaggagggggagaagaagg 55379
>emb|AL844566.8| Mouse DNA sequence from clone RP23-173H17 on chromosome 2, complete sequence Length = 229583 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 atgaggaggagggggagaagaagg 144 |||||||||||| ||||||||||| Sbjct: 77262 atgaggaggaggaggagaagaagg 77285
>gb|AC125520.3| Mus musculus BAC clone RP24-281J17 from 8, complete sequence Length = 178227 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ccagggattccatcaaagat 254 |||||||||||||||||||| Sbjct: 119236 ccagggattccatcaaagat 119255
>gb|AC127255.4| Mus musculus BAC clone RP24-291I7 from 5, complete sequence Length = 153492 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 aggaggagggggagaagaag 143 |||||||||||||||||||| Sbjct: 44409 aggaggagggggagaagaag 44390
>gb|AC068908.21| Mus musculus BAC Clone 389o18 RPCI-23, complete sequence Length = 198576 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ggaggagggggagaagaagg 144 |||||||||||||||||||| Sbjct: 117905 ggaggagggggagaagaagg 117886
>gb|AC136837.1| Homo sapiens chromosome 16 clone RP11-483N11, complete sequence Length = 65756 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ggagaagaaggtgcccaagc 153 |||||||||||||||||||| Sbjct: 6679 ggagaagaaggtgcccaagc 6698
>gb|AC161461.5| Mus musculus BAC clone RP23-104L7 from chromosome 13, complete sequence Length = 234110 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 604 tgttgtccatgtgaaatatt 623 |||||||||||||||||||| Sbjct: 151635 tgttgtccatgtgaaatatt 151616
>dbj|AB209499.1| Homo sapiens mRNA for calcium channel, voltage-dependent, alpha 1E subunit variant protein Length = 11702 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 2116 gatgaggaggaggtggagaagaag 2139
>gb|AC167020.3| Mus musculus BAC clone RP23-201I6 from chromosome 1, complete sequence Length = 209249 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 atgaggaggagggggagaagaagg 144 |||||||||||| ||||||||||| Sbjct: 207810 atgaggaggaggaggagaagaagg 207833
>emb|AL732615.15| Mouse DNA sequence from clone RP23-190O8 on chromosome 4, complete sequence Length = 189819 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 aggaggagggggagaagaag 143 |||||||||||||||||||| Sbjct: 108560 aggaggagggggagaagaag 108579
>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete sequence Length = 148202 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 atcaaagatgaagggaggat 265 |||||||||||||||||||| Sbjct: 28876 atcaaagatgaagggaggat 28895
>emb|AL953913.5| Mouse DNA sequence from clone RP23-390H16 on chromosome 11, complete sequence Length = 60880 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ggaggagggggagaagaagg 144 |||||||||||||||||||| Sbjct: 43105 ggaggagggggagaagaagg 43124
>gb|L27745.1|HUMVOCC Homo sapiens voltage-operated calcium channel, alpha-1 subunit mRNA, complete cds Length = 7110 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 3316 gatgaggaggaggtggagaagaag 3339
>emb|AL672100.7| Mouse DNA sequence from clone RP23-125A1 on chromosome 2, complete sequence Length = 196421 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 atgaggaggagggggagaag 140 |||||||||||||||||||| Sbjct: 5784 atgaggaggagggggagaag 5803
>emb|AL837521.6| Mouse DNA sequence from clone RP23-28I8 on chromosome 4, complete sequence Length = 230493 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 aaagcagatgaggaggagggggag 137 |||||||| ||||||||||||||| Sbjct: 54820 aaagcagaggaggaggagggggag 54843
>gb|L29385.1|HUMHVDCA Homo sapiens (clone pcDNA-alpha1E-3) voltage-dependent calcium channel alpha-1E-3 subunit mRNA, complete cds Length = 7089 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 3484 gatgaggaggaggtggagaagaag 3507
>gb|L29384.1|HUMHVDC Homo sapiens (clone pcDNA-alpha1E-1) voltage-dependent calcium channel alpha-1E-1 subunit mRNA, complete cds Length = 7032 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 120 gatgaggaggagggggagaagaag 143 ||||||||||||| |||||||||| Sbjct: 3427 gatgaggaggaggtggagaagaag 3450 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,494,726 Number of Sequences: 3902068 Number of extensions: 6494726 Number of successful extensions: 147923 Number of sequences better than 10.0: 210 Number of HSP's better than 10.0 without gapping: 210 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 146796 Number of HSP's gapped (non-prelim): 1126 length of query: 645 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 622 effective length of database: 17,143,297,704 effective search space: 10663131171888 effective search space used: 10663131171888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
