ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal30g14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY123422.1| Triticum aestivum putative Rieske Fe-S precursor protein mRNA, complete cds Length = 866 Score = 967 bits (488), Expect = 0.0 Identities = 539/556 (96%) Strand = Plus / Plus Query: 14 ccgcctccaaccccacccagctctgccgaacccgtgcgagctcgctatgcaagcccgtca 73 ||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 74 ccgcctccaaccctacccagctctgccggacccgtgcaagctcgctgtgcaagcccgtca 133 Query: 74 agggcctgggcttcggccgggagcgcatcccgaggaacatcacatgcatggccggcagca 133 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 134 agggcctgggcttcggccgggagcgcatcccgaggaacatcacctgcatggccggcagca 193 Query: 134 tctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgctgctgg 193 |||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||| Sbjct: 194 tctccgcggaccgcgtgccggacatgagcaagagggagctgatgaacctgctcctgctgg 253 Query: 194 gcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcgtcccgg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 254 gcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcgtccccg 313 Query: 254 ccggctccgggagcaacgccggaggggtcgccgccaaggacaagctcggcaacgacatcc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 ccggctccgggagcaacgccggaggggtcgccgccaaggacaagctcggcaacgacatcc 373 Query: 314 tcgtcgaggattggctcaagacgcacggccccaacgaccgcacgctcgcccaggggctca 373 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 374 tcgtcgaggactggctcaagacgcacggccccaacgaccgcacgctggcccaggggctca 433 Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 434 agggtgatcctacctaccttgtggtggagtccgacaagacccttgccacctacgggatca 493 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttcc 493 ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 494 acgccgtgtgcacgcatcttggatgcgtcgtgccgtggaacgccgccgagaacaagttcc 553 Query: 494 tctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgcac 553 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 554 tctgcccctgccatggatcccagtacaacaaccagggcaaggttgtccgtgggcctgcac 613 Query: 554 ctctgtcgctggccct 569 |||||||||||||||| Sbjct: 614 ctctgtcgctggccct 629
>dbj|AK071634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100K03, full insert sequence Length = 1082 Score = 450 bits (227), Expect = e-123 Identities = 386/439 (87%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| | || |||||||||||||||||| ||||| | |||||||||||||||| | Sbjct: 199 gcagcatcccggccgaccgcgtcccggacatgggcaagcgccagctgatgaacctcctcc 258 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 259 tgctcggcgccatctcgctccccaccgtcggcatgctcgtcccctacggcgccttcttca 318 Query: 248 tcccggccggctccgggagcaacgccggaggggtcgccgccaaggacaagctcggcaacg 307 |||| ||||| ||||||| | || ||| ||| | ||||||||||||||||||||||| Sbjct: 319 tccccgccgggtccgggaacgccggcggcgggcaggtcgccaaggacaagctcggcaacg 378 Query: 308 acatcctcgtcgaggattggctcaagacgcacggccccaacgaccgcacgctcgcccagg 367 || | |||| |||||| ||||||||||| |||||||||||||||||||| ||| |||||| Sbjct: 379 acgtgctcgccgaggagtggctcaagacacacggccccaacgaccgcaccctcacccagg 438 Query: 368 ggctcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacg 427 ||||||||||||| || || ||||| || |||||| |||||||||| || ||||| |||| Sbjct: 439 ggctcaagggtgacccgacgtacctcgtcgtggaggccgacaagacgctggccacgtacg 498 Query: 428 ggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaaca 487 ||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 499 ggatcaacgccgtgtgcacgcaccttgggtgcgtcgtgccgtggaacgccgccgagaaca 558 Query: 488 agttcctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggac 547 ||||| ||||||| ||||| || || ||||||||||||||||||| ||| |||||||||| Sbjct: 559 agttcatctgcccctgccacggctcgcagtacaacaaccagggcagggtcgtccgtggac 618 Query: 548 ctgcacctctgtcgctggc 566 |||| || ||||||||||| Sbjct: 619 ctgctcccctgtcgctggc 637 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 62 gcaagcccgtcaagggcctgggcttcggccgggagcgcatcccgagga 109 |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 121 gcaagcccgtcaagggcctgggcttcggccgggagcgcgtgccgagga 168
>gb|AF093631.1|AF093631 Oryza sativa Rieske Fe-S precursor protein (RISP) mRNA, complete cds Length = 919 Score = 450 bits (227), Expect = e-123 Identities = 386/439 (87%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| | || |||||||||||||||||| ||||| | |||||||||||||||| | Sbjct: 187 gcagcatcccggccgaccgcgtcccggacatgggcaagcgccagctgatgaacctcctcc 246 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 247 tgctcggcgccatctcgctccccaccgtcggcatgctcgtcccctacggcgccttcttca 306 Query: 248 tcccggccggctccgggagcaacgccggaggggtcgccgccaaggacaagctcggcaacg 307 |||| ||||| ||||||| | || ||| ||| | ||||||||||||||||||||||| Sbjct: 307 tccccgccgggtccgggaacgccggcggcgggcaggtcgccaaggacaagctcggcaacg 366 Query: 308 acatcctcgtcgaggattggctcaagacgcacggccccaacgaccgcacgctcgcccagg 367 || | |||| |||||| ||||||||||| |||||||||||||||||||| ||| |||||| Sbjct: 367 acgtgctcgccgaggagtggctcaagacacacggccccaacgaccgcaccctcacccagg 426 Query: 368 ggctcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacg 427 ||||||||||||| || || ||||| || |||||| |||||||||| || ||||| |||| Sbjct: 427 ggctcaagggtgacccgacgtacctcgtcgtggaggccgacaagacgctggccacgtacg 486 Query: 428 ggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaaca 487 ||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 487 ggatcaacgccgtgtgcacgcaccttgggtgcgtcgtgccgtggaacgccgccgagaaca 546 Query: 488 agttcctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggac 547 ||||| ||||||| ||||| || || ||||||||||||||||||| ||| |||||||||| Sbjct: 547 agttcatctgcccctgccacggctcgcagtacaacaaccagggcagggtcgtccgtggac 606 Query: 548 ctgcacctctgtcgctggc 566 |||| || ||||||||||| Sbjct: 607 ctgctcccctgtcgctggc 625 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 62 gcaagcccgtcaagggcctgggcttcggccgggagcgcatcccgagga 109 |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 109 gcaagcccgtcaagggcctgggcttcggccgggagcgcgtgccgagga 156
>gb|AY104934.1| Zea mays PCO071754 mRNA sequence Length = 1058 Score = 424 bits (214), Expect = e-115 Identities = 385/442 (87%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 ||||||||||||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 277 gcagcatctccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 336 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||| | |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 337 tcctcggcgccatctcgttgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 396 Query: 248 tcccggccggctccgggagcaacgccggaggggtcgccgccaaggacaagctcggcaacg 307 |||| ||||||||||||| | || ||| ||| | ||||||||||||||| ||||||| Sbjct: 397 tccctgccggctccgggaacgccggcggcgggacctacgccaaggacaagctgggcaacg 456 Query: 308 acatcctcgtcgaggattggctcaagacgcacggccccaacgaccgcacgctcgcccagg 367 ||||| || ||||| |||||||| |||||||| |||||||||||||||||||| |||| Sbjct: 457 acatcacggtggaggagtggctcaacacgcacggtcccaacgaccgcacgctcgcgcagg 516 Query: 368 ggctcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacg 427 ||||||||||||| || || ||||| ||||||||| |||||||| || |||||||||| Sbjct: 517 ggctcaagggtgaccccacgtacctggtggtggagcaggacaagacgctggccacctacg 576 Query: 428 ggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaaca 487 ||||||||||||| ||||| || || |||||||||||||| ||||||| ||| ||||||| Sbjct: 577 ggatcaacgccgtgtgcactcacctcggctgcgtcgtgccgtggaacggcgctgagaaca 636 Query: 488 agttcctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggac 547 ||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 637 agttcatctgcccctgccacggatcccagtacaacaaccagggcaaggtggtccgtggac 696 Query: 548 ctgcacctctgtcgctggccct 569 | || ||||||||||||||||| Sbjct: 697 cggcgcctctgtcgctggccct 718
>gb|BT016255.1| Zea mays clone Contig88 mRNA sequence Length = 998 Score = 416 bits (210), Expect = e-113 Identities = 384/442 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 ||||||||||||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 218 gcagcatctccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 277 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||| | |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 278 tcctcggcgccatctcgttgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 337 Query: 248 tcccggccggctccgggagcaacgccggaggggtcgccgccaaggacaagctcggcaacg 307 |||| ||||||||||||| | || ||| ||| | ||||||||||||||| ||||||| Sbjct: 338 tccctgccggctccgggaacgccggcggcgggacctacgccaaggacaagctgggcaacg 397 Query: 308 acatcctcgtcgaggattggctcaagacgcacggccccaacgaccgcacgctcgcccagg 367 ||||| || |||| |||||||| |||||||| |||||||| ||||||||||| |||| Sbjct: 398 acatcacggtggaggcgtggctcaacacgcacggtcccaacgatcgcacgctcgcgcagg 457 Query: 368 ggctcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacg 427 ||||||||||||| || || ||||| ||||||||| |||||||| || |||||||||| Sbjct: 458 ggctcaagggtgaccccacgtacctggtggtggagcaggacaagacgctggccacctacg 517 Query: 428 ggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaaca 487 ||||||||||||| ||||| || || |||||||||||||| ||||||| ||||||||||| Sbjct: 518 ggatcaacgccgtgtgcactcacctcggctgcgtcgtgccgtggaacggcgccgagaaca 577 Query: 488 agttcctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggac 547 ||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct: 578 agttcatctgcccatgccacggatcccagtacaacaaccagggcaaggtggtccgtggac 637 Query: 548 ctgcacctctgtcgctggccct 569 | || ||||||||||||||||| Sbjct: 638 cggcgcctctgtcgctggccct 659
>emb|AJ222783.1|HVJ222783 Hordeum vulgare mRNA for cytochrome b6/f-complex iron-sulfur like-protein, clone RG115 Length = 275 Score = 398 bits (201), Expect = e-108 Identities = 201/201 (100%) Strand = Plus / Plus Query: 371 tcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacggga 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5 tcaagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacggga 64 Query: 431 tcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagt 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 tcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagt 124 Query: 491 tcctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctg 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tcctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctg 184 Query: 551 cacctctgtcgctggccctcg 571 ||||||||||||||||||||| Sbjct: 185 cacctctgtcgctggccctcg 205
>gb|AY581830.1| Cynodon dactylon putative Rieske Fe-S precursor protein mRNA, partial cds Length = 511 Score = 210 bits (106), Expect = 4e-51 Identities = 205/238 (86%) Strand = Plus / Plus Query: 330 caagacgcacggccccaacgaccgcacgctcgcccaggggctcaagggtgatcctaccta 389 |||||||||||||||||| |||||||||||| | ||||||||||||||||| || || || Sbjct: 1 caagacgcacggccccaaagaccgcacgctcacgcaggggctcaagggtgaccccacgta 60 Query: 390 ccttgtggtggagtccgacaagaccctcgccacctacgggatcaacgccgtctgcacgca 449 ||| || ||||| |||||||| || ||||||||||| |||||||| |||||||| || Sbjct: 61 cctggtcgtggacaaggacaagacgctggccacctacggcatcaacgcggtctgcaccca 120 Query: 450 tcttggctgcgtcgtgccttggaacgccgccgagaacaagttcctctgcccttgccatgg 509 || || ||||||||||| ||||| || |||||||||||||| | | ||| ||||| || Sbjct: 121 cctgggatgcgtcgtgccgtggaatccccccgagaacaagttcatgtacccatgccacgg 180 Query: 510 atcccagtacaacaaccagggcaaggttgtccgtggacctgcacctctgtcgctggcc 567 ||||||||||||||||||||||||||| ||||||||||| || || |||||||||||| Sbjct: 181 atcccagtacaacaaccagggcaaggtcgtccgtggaccggcgccactgtcgctggcc 238
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 194 bits (98), Expect = 2e-46 Identities = 158/178 (88%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| || |||||| |||||||||| || ||||| |||||||||| Sbjct: 22132472 agggtgacccgacgtacctcgtcgtggaggccgacaagacgctggccacgtacgggatca 22132531 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttcc 493 ||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 22132532 acgccgtgtgcacgcaccttgggtgcgtcgtgccgtggaacgccgccgagaacaagttca 22132591 Query: 494 tctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgc 551 ||||||| ||||| || || ||||||||||||||||||| ||| |||||||||||||| Sbjct: 22132592 tctgcccctgccacggctcgcagtacaacaaccagggcagggtcgtccgtggacctgc 22132649 Score = 147 bits (74), Expect = 5e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| | || |||||||||||||||||| ||||| | |||||||||||||||| | Sbjct: 22132041 gcagcatcccggccgaccgcgtcccggacatgggcaagcgccagctgatgaacctcctcc 22132100 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 22132101 tgctcggcgccatctcgctccccaccgtcggcatgctcgtcccctacggcgccttcttca 22132160 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 22132161 tccccgccgg 22132170 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||||||||||||| | |||| |||||| ||||||||||| |||||||| Sbjct: 22132295 cgccaaggacaagctcggcaacgacgtgctcgccgaggagtggctcaagacacacggccc 22132354 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 |||||||||||| ||| ||||||||||||||| Sbjct: 22132355 caacgaccgcaccctcacccaggggctcaagg 22132386 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 62 gcaagcccgtcaagggcctgggcttcggccgggagcgcatcccgagga 109 |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 22131963 gcaagcccgtcaagggcctgggcttcggccgggagcgcgtgccgagga 22132010
>dbj|AP005125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0058I18 Length = 151453 Score = 194 bits (98), Expect = 2e-46 Identities = 158/178 (88%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| || |||||| |||||||||| || ||||| |||||||||| Sbjct: 86128 agggtgacccgacgtacctcgtcgtggaggccgacaagacgctggccacgtacgggatca 86187 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttcc 493 ||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 86188 acgccgtgtgcacgcaccttgggtgcgtcgtgccgtggaacgccgccgagaacaagttca 86247 Query: 494 tctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgc 551 ||||||| ||||| || || ||||||||||||||||||| ||| |||||||||||||| Sbjct: 86248 tctgcccctgccacggctcgcagtacaacaaccagggcagggtcgtccgtggacctgc 86305 Score = 147 bits (74), Expect = 5e-32 Identities = 116/130 (89%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| | || |||||||||||||||||| ||||| | |||||||||||||||| | Sbjct: 85697 gcagcatcccggccgaccgcgtcccggacatgggcaagcgccagctgatgaacctcctcc 85756 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||| || Sbjct: 85757 tgctcggcgccatctcgctccccaccgtcggcatgctcgtcccctacggcgccttcttca 85816 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 85817 tccccgccgg 85826 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||||||||||||| | |||| |||||| ||||||||||| |||||||| Sbjct: 85951 cgccaaggacaagctcggcaacgacgtgctcgccgaggagtggctcaagacacacggccc 86010 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 |||||||||||| ||| ||||||||||||||| Sbjct: 86011 caacgaccgcaccctcacccaggggctcaagg 86042 Score = 79.8 bits (40), Expect = 9e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 62 gcaagcccgtcaagggcctgggcttcggccgggagcgcatcccgagga 109 |||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 85619 gcaagcccgtcaagggcctgggcttcggccgggagcgcgtgccgagga 85666
>gb|DQ427777.1| Sorghum propinquum locus HHU30 genomic sequence Length = 742 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 191 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 250 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 251 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 310 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 311 tccccgccgg 320 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 433 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 492 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 493 caacgaccgcacgctggcgcaggggctcaagg 524 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 646 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 705 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 706 acgccgtgtgcactcacctcggctgcgtcgtgcc 739
>gb|DQ427776.1| Sorghum bicolor voucher PI585454 locus HHU30 genomic sequence Length = 728 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 425 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 484 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 485 caacgaccgcacgctggcgcaggggctcaagg 516 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 632 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 691 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 692 acgccgtgtgcactcacctcggctgcgtcgtgcc 725
>gb|DQ427775.1| Sorghum bicolor voucher PI267539 locus HHU30 genomic sequence Length = 731 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728
>gb|DQ427774.1| Sorghum bicolor voucher PI267408 locus HHU30 genomic sequence Length = 731 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728
>gb|DQ427773.1| Sorghum bicolor voucher PI221607 locus HHU30 genomic sequence Length = 725 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 629 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 688 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 689 acgccgtgtgcactcacctcggctgcgtcgtgcc 722
>gb|DQ427772.1| Sorghum bicolor voucher PI152702 locus HHU30 genomic sequence Length = 731 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728
>gb|DQ427771.1| Sorghum bicolor voucher NSL92371 locus HHU30 genomic sequence Length = 731 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728
>gb|DQ427770.1| Sorghum bicolor voucher NSL87902 locus HHU30 genomic sequence Length = 728 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 425 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 484 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 485 caacgaccgcacgctggcgcaggggctcaagg 516 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 632 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 691 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 692 acgccgtgtgcactcacctcggctgcgtcgtgcc 725
>gb|DQ427769.1| Sorghum bicolor voucher NSL87666 locus HHU30 genomic sequence Length = 733 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 430 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 489 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 490 caacgaccgcacgctggcgcaggggctcaagg 521 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 637 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 696 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 697 acgccgtgtgcactcacctcggctgcgtcgtgcc 730
>gb|DQ427768.1| Sorghum bicolor voucher NSL77217 locus HHU30 genomic sequence Length = 731 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728
>gb|DQ427767.1| Sorghum bicolor voucher NSL77034 locus HHU30 genomic sequence Length = 723 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 181 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 240 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 241 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 300 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 301 tccccgccgg 310 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720
>gb|DQ427766.1| Sorghum bicolor voucher NSL56174 locus HHU30 genomic sequence Length = 723 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 181 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 240 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 241 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 300 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 301 tccccgccgg 310 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720
>gb|DQ427765.1| Sorghum bicolor voucher NSL56003 locus HHU30 genomic sequence Length = 723 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 181 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 240 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 241 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 300 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 301 tccccgccgg 310 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720
>gb|DQ427764.1| Sorghum bicolor voucher NSL55243 locus HHU30 genomic sequence Length = 723 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 181 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 240 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 241 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 300 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 301 tccccgccgg 310 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720
>gb|DQ427763.1| Sorghum bicolor voucher NSL51365 locus HHU30 genomic sequence Length = 723 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 181 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 240 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 241 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 300 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 301 tccccgccgg 310 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 426 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 485 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 486 caacgaccgcacgctggcgcaggggctcaagg 517 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 627 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 686 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 687 acgccgtgtgcactcacctcggctgcgtcgtgcc 720
>gb|DQ427762.1| Sorghum bicolor voucher NSL51030 locus HHU30 genomic sequence Length = 728 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 425 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 484 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 485 caacgaccgcacgctggcgcaggggctcaagg 516 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 632 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 691 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 692 acgccgtgtgcactcacctcggctgcgtcgtgcc 725
>gb|DQ427761.1| Sorghum bicolor voucher NSL50875 locus HHU30 genomic sequence Length = 725 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 629 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 688 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 689 acgccgtgtgcactcacctcggctgcgtcgtgcc 722
>gb|DQ427760.1| Sorghum bicolor voucher BTx623 locus HHU30 genomic sequence Length = 731 Score = 123 bits (62), Expect = 7e-25 Identities = 113/130 (86%) Strand = Plus / Plus Query: 128 gcagcatctccgcggaccgcgtcccggacatgagcaagagggagctgatgaacctcctgc 187 |||||||| |||| ||||||||||| |||||| ||| || |||||||||||||||| | Sbjct: 183 gcagcatccccgccgaccgcgtccccgacatggagaagcggaagctgatgaacctcctcc 242 Query: 188 tgctgggcgccatctcgctccccaccttcggcatgctcgtcccctacggctccttcctcg 247 | || |||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 243 tcctcggcgccatctcgctgcccaccgtcggcatggtcgtcccctacggcgccttcttcg 302 Query: 248 tcccggccgg 257 |||| ||||| Sbjct: 303 tccccgccgg 312 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 285 cgccaaggacaagctcggcaacgacatcctcgtcgaggattggctcaagacgcacggccc 344 ||||||||||||||| |||||||||||| || || || ||||||||||||||||| || Sbjct: 428 cgccaaggacaagctgggcaacgacatcacggtggatgagtggctcaagacgcacggtcc 487 Query: 345 caacgaccgcacgctcgcccaggggctcaagg 376 ||||||||||||||| || ||||||||||||| Sbjct: 488 caacgaccgcacgctggcgcaggggctcaagg 519 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/94 (86%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 ||||||| || || ||||| ||||||||| |||||||| || |||||||||||||||| Sbjct: 635 agggtgacccgacgtacctggtggtggagcaggacaagacgctggccacctacgggatca 694 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgcc 467 ||||||| ||||| || || |||||||||||||| Sbjct: 695 acgccgtgtgcactcacctcggctgcgtcgtgcc 728
>gb|DQ122916.1| Chlamydomonas incerta chloroplast cytochrome B6/F complex rieske iron-sulfur protein (PetC) mRNA, partial cds; nuclear gene for chloroplast product Length = 1178 Score = 89.7 bits (45), Expect = 9e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 433 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttc 492 |||||||| ||||| || || |||||||||||||||||| || ||||||||||||||| Sbjct: 307 aacgccgtgtgcactcacctgggctgcgtcgtgccttgggtggcggccgagaacaagttc 366 Query: 493 ctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgca 552 ||||||||||| || || ||||||||| |||||||||| |||||||| || || Sbjct: 367 aagtgcccttgccacggctctcagtacaacgctgagggcaaggtggtccgtggccccgct 426 Query: 553 cctctgtcgctggccct 569 || |||||||||||||| Sbjct: 427 cccctgtcgctggccct 443
>dbj|D32003.1| Chlamydomonas reinhardtii mRNA for chloroplast Rieske Fe-S precursor protein, complete cds Length = 1436 Score = 89.7 bits (45), Expect = 9e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 433 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttc 492 |||||||| ||||| || || |||||||||||||||||| || ||||||||||||||| Sbjct: 440 aacgccgtgtgcactcacctgggctgcgtcgtgccttgggtggcggccgagaacaagttc 499 Query: 493 ctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgca 552 ||||||||||| || || ||||||||| |||||||||| |||||||| || || Sbjct: 500 aagtgcccttgccacggctctcagtacaacgctgagggcaaggtggtccgtggccccgct 559 Query: 553 cctctgtcgctggccct 569 || |||||||||||||| Sbjct: 560 cccctgtcgctggccct 576
>gb|DQ384526.1| Panax ginseng clone PG6L-3 photosynthetic electron transfer-like protein mRNA, complete cds Length = 770 Score = 87.7 bits (44), Expect = 4e-14 Identities = 116/140 (82%) Strand = Plus / Plus Query: 421 acctacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgcc 480 ||||| || ||||| || || |||||||||||||| || || ||||| ||||| || Sbjct: 389 acctatggtatcaatgcagtgtgcacgcatcttggttgtgttgtgccatggaataaagca 448 Query: 481 gagaacaagttcctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtc 540 |||||||||||| | ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct: 449 gagaacaagttcatgtgcccatgccatggatctcagtacaacaaccaaggcaaggttgtt 508 Query: 541 cgtggacctgcacctctgtc 560 | || ||||| |||||||| Sbjct: 509 agaggccctgctcctctgtc 528
>gb|AY826845.1| Pavlova lutheri clone PLCB61 chloroplast cytochrome b6 mRNA, partial cds; nuclear gene for chloroplast product Length = 640 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 431 tcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagt 490 ||||||| ||||||||||| ||||||||||||||||| ||||||||||| || | |||| Sbjct: 222 tcaacgcggtctgcacgcaccttggctgcgtcgtgccgtggaacgccgcgcagcagaagt 281 Query: 491 tcctctgcccttgccatggatcccagtac 519 || ||||||| ||||| || || |||||| Sbjct: 282 tcatctgcccctgccacggctcgcagtac 310
>gb|AY300039.1| Solanum tuberosum putative Rieske Fe-S protein precursor (FeS) mRNA, complete cds; nuclear gene for chloroplast product Length = 693 Score = 79.8 bits (40), Expect = 9e-12 Identities = 124/152 (81%) Strand = Plus / Plus Query: 373 aagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatc 432 ||||| |||||||| |||||||| |||||| ||| || ||||| ||||| || ||| Sbjct: 406 aagggagatcctacttaccttgttgtggagaacgatggaacactcgcgacctatggtatc 465 Query: 433 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttc 492 ||||| || ||||| || ||||| || |||||||| ||||| | || |||||||||||| Sbjct: 466 aacgctgtgtgcactcaccttggttgtgtcgtgccgtggaatactgctgagaacaagttc 525 Query: 493 ctctgcccttgccatggatcccagtacaacaa 524 | ||||||||||||||||| || |||||||| Sbjct: 526 atttgcccttgccatggatctcaatacaacaa 557
>gb|AC122543.1| Genomic sequence for Brassica oleracea, clone B21H13, complete sequence Length = 101563 Score = 79.8 bits (40), Expect = 9e-12 Identities = 121/148 (81%) Strand = Plus / Plus Query: 374 agggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatca 433 |||| ||||| || ||||| || |||||| ||||||||| || || || ||||| || | Sbjct: 101064 agggagatccaacttacctagttgtggagaacgacaagacactagcgacatacggtataa 101123 Query: 434 acgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttcc 493 |||| || ||||| |||||||| || || ||||| |||||| || ||||||||||||| Sbjct: 101124 acgcagtatgcacacatcttggatgtgttgtgccatggaacaaagctgagaacaagttcc 101183 Query: 494 tctgcccttgccatggatcccagtacaa 521 | || ||||||||||||||||| ||||| Sbjct: 101184 tatgtccttgccatggatcccaatacaa 101211
>gb|AF037456.1|AF037456 Fritillaria agrestis cytochrome B6-F complex iron-sulfur subunit precursor (petC) mRNA, complete cds Length = 881 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 484 aacaagttcctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgt 543 ||||||||||||||||| ||||| ||||| || |||||||| || || ||||||||| | Sbjct: 523 aacaagttcctctgcccctgccacggatcgcaatacaacaatcaagggaaggttgtcagg 582 Query: 544 ggacctgcacctctgtcgctggc 566 ||||||||||| |||||||||| Sbjct: 583 ggacctgcaccgttgtcgctggc 605
>ref|NM_116566.3| Arabidopsis thaliana PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C) AT4G03280 (PETC) transcript variant AT4G03280.1 mRNA, complete cds Length = 963 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 405 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 464 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 561 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 620 Query: 465 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 621 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 678
>ref|NM_178964.1| Arabidopsis thaliana PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C) AT4G03280 (PETC) transcript variant AT4G03280.2 mRNA, complete cds Length = 1062 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 405 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 464 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 660 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 719 Query: 465 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 720 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 777
>gb|AC005275.1| Arabidopsis thaliana BAC F4C21 from chromosome IV, top arm, near 17 cM, complete sequence Length = 136335 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 405 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 464 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 74152 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 74211 Query: 465 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 74212 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 74269
>emb|AL161496.2|ATCHRIV8 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 8 Length = 195429 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 405 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 464 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 92524 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 92583 Query: 465 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 92584 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 92641
>emb|AJ292972.1|ATH292972 Arabidopsis thaliana petC gene for Rieske FeS protein, exons 1-5 Length = 2145 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 405 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 464 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 1800 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 1859 Query: 465 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 1860 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 1917
>emb|AJ243702.1|ATH243702 Arabidopsis thaliana mRNA for rieske iron-sulfur protein precursor (petC gene) Length = 957 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 405 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 464 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 537 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 596 Query: 465 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 597 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 654
>gb|AY093726.1| Arabidopsis thaliana AT4g03280/F4C21_21 mRNA, complete cds Length = 633 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 405 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 464 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 375 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 434 Query: 465 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 435 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 492
>gb|AF410296.1|AF410296 Arabidopsis thaliana AT4g03280/F4C21_21 mRNA, complete cds Length = 1061 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 405 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 464 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 663 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 722 Query: 465 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 723 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 780
>gb|AF370566.1|AF370566 Arabidopsis thaliana putative component of cytochrome B6-F complex (F4C21.21) mRNA, complete cds Length = 732 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 405 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 464 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 432 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 491 Query: 465 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 492 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 549
>emb|BX827560.1|CNS0A2RQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS74ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1358 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 405 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 464 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 1016 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 1075 Query: 465 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||| |||||| || ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 1076 gccatggaacaaagctgagaacaagtttctatgtccttgccatggatcccaatacaac 1133
>emb|AJ784852.1| Cyanophora paradoxa mRNA for Rieske iron-sulphur protein (petC-1 gene) Length = 864 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 431 tcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagt 490 |||||||||||||||| || ||||| |||||||| || |||||||| | |||||||||| Sbjct: 527 tcaacgccgtctgcactcaccttgggtgcgtcgtcccgtggaacgcgtcggagaacaagt 586 Query: 491 tcctctgcccttgccatggatcccagtac 519 || | ||||| ||||| || ||||||||| Sbjct: 587 tcatgtgcccgtgccacggctcccagtac 615
>dbj|AB025003.1| Cicer arietinum mRNA for plastoquinol-plastocyanin reductase, partial cds Length = 479 Score = 73.8 bits (37), Expect = 6e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 373 aagggtgatcctacctaccttgtggtggagtccgacaagaccctcgccacctacgggatc 432 ||||| |||||||||||||||||||||||| |||| || || || || || ||||| Sbjct: 213 aagggggatcctacctaccttgtggtggagaaagacagaacacttgcaacatatgggatt 272 Query: 433 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttc 492 || || || ||||| || || || || |||||||| | ||| |||||||||||||||| Sbjct: 273 aatgcagtatgcactcacctcgggtgtgtcgtgccgtttaacaccgccgagaacaagttt 332 Query: 493 ctctgcccttgccatggatcccagtacaa 521 ||||||| ||||||||||| |||||||| Sbjct: 333 atctgcccctgccatggatctcagtacaa 361
>dbj|AU066527.1| Chlamydomonas sp. HS-5 mRNA for hypothetical protein, NaCl inducible, complete cds, clone:NaEX96-104 Length = 578 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 481 gagaacaagttcctctgcccttgccatggatcccagtacaacaaccagggcaaggt 536 |||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 419 gagaacaagttcaagtgcccctgccacggatcgcagtacaacaaccagggcaaggt 474
>emb|BX826362.1|CNS0A4FZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 714 Score = 60.0 bits (30), Expect = 8e-06 Identities = 96/118 (81%) Strand = Plus / Plus Query: 405 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 464 ||||||||| || || || ||||| |||||||| || ||||| |||||||| || || || Sbjct: 561 cgacaagactctagcgacatacggtatcaacgcagtgtgcactcatcttggatgtgttgt 620 Query: 465 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||| |||||| || ||| ||||||| | || ||||||||||||||||| |||||| Sbjct: 621 gccatggaacaaagctgagtacaagtttccatgtccttgccatggatcccaatacaac 678
>emb|X63605.1|PSPETC P.sativum petC mRNA for chloroplast Rieske FeS protein Length = 880 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 481 gagaacaagttcctctgcccttgccatggatcccagtacaa 521 |||||||||||| ||||||| ||||||||||| |||||||| Sbjct: 551 gagaacaagttcatctgcccctgccatggatctcagtacaa 591 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 373 aagggtgatcctacctaccttgtggt 398 |||||||||||||||||||||||||| Sbjct: 443 aagggtgatcctacctaccttgtggt 468
>gb|AY826843.1| Heterocapsa triquetra clone HTCB61 chloroplast cytochrome b6 mRNA, partial cds; nuclear gene for chloroplast product Length = 531 Score = 54.0 bits (27), Expect = 5e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 430 atcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaag 489 |||||||| |||||||| || || |||||||||||||| |||||| || |||| Sbjct: 170 atcaacgcggtctgcacccacctgggctgcgtcgtgccctggaacaggaacgcgaaccgc 229 Query: 490 ttcctctgcccttgccatggatcccagtacaacaaccagggcaaggt 536 ||| ||||||| ||||| ||||| ||||||||| || |||||||||| Sbjct: 230 ttcatctgcccgtgccacggatcgcagtacaacgacgagggcaaggt 276
>emb|AJ784853.1| Cyanophora paradoxa mRNA for Rieske iron-sulphur protein (petC-2 gene) Length = 874 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 433 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaac 474 |||||||||||||| || |||||||||||||| || |||||| Sbjct: 513 aacgccgtctgcactcaccttggctgcgtcgttccctggaac 554 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 348 cgaccgcacgctcgcccaggggctcaagggtgatcctacctacct 392 ||||||| ||||||||||||| |||||||| ||| | |||||||| Sbjct: 428 cgaccgctcgctcgcccagggcctcaagggcgatgccacctacct 472
>emb|BX826457.1|CNS0A4G1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZC01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 532 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 481 gagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||||||||||| || || ||||||||||||||||| |||||| Sbjct: 211 gagaacaagtttctatgtccttgccatggatcccaatacaac 252
>emb|BX826302.1|CNS0A381 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB13ZB05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 790 Score = 52.0 bits (26), Expect = 0.002 Identities = 95/118 (80%) Strand = Plus / Plus Query: 405 cgacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgt 464 ||||||||| || || || ||||| |||||||| || || || | |||||| || || || Sbjct: 436 cgacaagactctagcgacatacggtatcaacgcagtgtgaactcttcttggatgtgttgt 495 Query: 465 gccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtacaac 522 ||| |||||| || ||||||||||| | || ||||||||||||||||| |||||| Sbjct: 496 gccatggaacaaagctgagaacaagtttttatgtccttgccatggatcccaatacaac 553
>emb|X06244.1|SORFES Spinach mRNA for Rieske FeS-precursor protein Length = 1024 Score = 52.0 bits (26), Expect = 0.002 Identities = 98/122 (80%) Strand = Plus / Plus Query: 439 gtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttcctctgc 498 |||||||| |||||||| || || ||||| | || || || |||||||| ||| | || Sbjct: 562 gtctgcacacatcttggatgtgtggtgccatttaatgctgctgagaacaaattcatttgt 621 Query: 499 ccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgcacctctg 558 || |||||||||||||| ||||| ||||| |||| ||||| || || ||||||||| || Sbjct: 622 ccatgccatggatcccaatacaataaccaaggcagagttgttcgaggccctgcacctttg 681 Query: 559 tc 560 || Sbjct: 682 tc 683
>gb|AF110783.1|AF110783 Volvox carteri f. nagariensis clone G9 rieske iron-sulfur protein precursor (petC) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1159 Score = 50.1 bits (25), Expect = 0.008 Identities = 109/137 (79%) Strand = Plus / Plus Query: 433 aacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgagaacaagttc 492 |||||||| ||||| || | ||||| ||||| |||||| || ||||||||||||||| Sbjct: 417 aacgccgtgtgcacccacttgggctgtgtcgttccttgggtggcggccgagaacaagttc 476 Query: 493 ctctgcccttgccatggatcccagtacaacaaccagggcaaggttgtccgtggacctgca 552 ||||||||||| || || |||||||| |||||||||| |||||||| ||||| Sbjct: 477 aagtgcccttgccacggctctcagtacaatgctgagggcaaggtggtccgtggccctgct 536 Query: 553 cctctgtcgctggccct 569 || ||||| ||||||| Sbjct: 537 ccgctgtctttggccct 553
>gb|AY267656.1| Bigelowiella natans Fe-S subunit of cytochrome c6f complex mRNA, complete cds; nuclear gene for plastid product Length = 1025 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 496 tgcccttgccatggatcccagtac 519 |||||||||||||||||||||||| Sbjct: 630 tgcccttgccatggatcccagtac 653
>emb|X76299.1|CRPETC C.reinhardtii petC gene Length = 1608 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Plus Query: 478 gccgagaacaagttcctctgcccttgccatggatcccagtacaacaaccagggcaaggtt 537 ||||||||||||||| ||||||||||| || || ||||||||| |||||||||| Sbjct: 1104 gccgagaacaagttcaagtgcccttgccacggctctcagtacaacgctgagggcaaggtg 1163 Query: 538 gtccgtgg 545 |||||||| Sbjct: 1164 gtccgtgg 1171 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 433 aacgccgtctgcacgcatcttggctgcgtcgtgccttgg 471 |||||||| ||||| || || |||||||||||||||||| Sbjct: 921 aacgccgtgtgcactcacctgggctgcgtcgtgccttgg 959
>emb|X66009.1|NTRFES1 N.tabacum mRNA for chloroplast Rieske FeS precursor protein 1 Length = 814 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 481 gagaacaagttcctctgcccttgccatggatcccagtacaacaacca 527 ||||||||||| | ||||| ||||||||||| || ||||||||||| Sbjct: 546 gagaacaagtttatttgcccctgccatggatctcaatacaacaacca 592
>emb|X64353.1|NTRFSCBFC N.tabacum mRNA for Rieske Fe/S protein of cytochrome b6/f complex Length = 833 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 481 gagaacaagttcctctgcccttgccatggatcccagtacaacaacca 527 ||||||||||| | ||||| ||||||||||| || ||||||||||| Sbjct: 510 gagaacaagtttatttgcccctgccatggatctcaatacaacaacca 556
>emb|BX572099.1| Prochlorococcus marinus MIT9313 complete genome; segment 5/7 Length = 349746 Score = 46.1 bits (23), Expect = 0.13 Identities = 44/51 (86%) Strand = Plus / Plus Query: 424 tacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaac 474 ||||| |||||||| ||||||| || || |||||||| |||||||||||| Sbjct: 12372 tacggaatcaacgcgatctgcacccacctcggctgcgtggtgccttggaac 12422
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Plus Query: 424 tacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgccgccgag 483 ||||| || |||||| ||||||| || || |||||||| ||||| |||||| || || Sbjct: 17466 tacggcattaacgccatctgcacccacctgggctgcgtggtgccctggaacagcggcgcc 17525 Query: 484 aacaagttcctctgcccttgcca 506 ||||||||| | ||||||||||| Sbjct: 17526 aacaagttcatgtgcccttgcca 17548
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 44.1 bits (22), Expect = 0.50 Identities = 46/54 (85%) Strand = Plus / Plus Query: 423 ctacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgc 476 |||||| |||||||| || ||||| || | |||||||| |||||||||||||| Sbjct: 367618 ctacggcatcaacgcagtttgcacccacttgggctgcgtggtgccttggaacgc 367671
>gb|AY826844.1| Isochrysis galbana clone ISCB61 chloroplast cytochrome b6 mRNA, partial cds; nuclear gene for chloroplast product Length = 1010 Score = 44.1 bits (22), Expect = 0.50 Identities = 91/114 (79%) Strand = Plus / Plus Query: 406 gacaagaccctcgccacctacgggatcaacgccgtctgcacgcatcttggctgcgtcgtg 465 ||||||||||||| | ||||| |||||||| || ||||| || || ||||||||||| Sbjct: 408 gacaagaccctcgagaactacgccatcaacgctgtttgcacccacctcggctgcgtcgtc 467 Query: 466 ccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagtac 519 || |||||| |||| || ||||| | ||||||| ||||| || || |||||| Sbjct: 468 ccatggaaccgcgcccagctcaagtacatctgcccgtgccacggctcgcagtac 521
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 44.1 bits (22), Expect = 0.50 Identities = 46/54 (85%) Strand = Plus / Minus Query: 423 ctacgggatcaacgccgtctgcacgcatcttggctgcgtcgtgccttggaacgc 476 |||||| |||||||| || ||||| || | |||||||| |||||||||||||| Sbjct: 1253187 ctacggcatcaacgcagtttgcacccacttgggctgcgtggtgccttggaacgc 1253134
>gb|AC093100.2| Drosophila melanogaster clone BACR05J04, complete sequence Length = 214621 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 tcgccgccaaggacaagctcggcaa 305 ||||||||||||||| ||||||||| Sbjct: 148155 tcgccgccaaggacacgctcggcaa 148179
>gb|AC124390.4| Mus musculus BAC clone RP24-434C11 from chromosome 12, complete sequence Length = 162663 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 ctccaaccccacccagctctg 38 ||||||||||||||||||||| Sbjct: 300 ctccaaccccacccagctctg 280
>emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 on chromosome 20q12 Contains the MAFB gene for v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian), a novel gene and two CpG islands, complete sequence Length = 145593 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 16 gcctccaaccccacccagctctgcc 40 ||||||||||||||||||| ||||| Sbjct: 4928 gcctccaaccccacccagccctgcc 4904
>gb|AC090377.15| Homo sapiens chromosome 18, clone RP11-866E20, complete sequence Length = 192704 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 atgaacctcctgctgctgggc 195 ||||||||||||||||||||| Sbjct: 142162 atgaacctcctgctgctgggc 142142
>gb|AC107990.5| Homo sapiens chromosome 18, clone RP11-103A19, complete sequence Length = 166109 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 atgaacctcctgctgctgggc 195 ||||||||||||||||||||| Sbjct: 25320 atgaacctcctgctgctgggc 25300
>ref|NM_135169.2| Drosophila melanogaster Pez CG9493-RA (Pez), mRNA Length = 4527 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 tcgccgccaaggacaagctcggcaa 305 ||||||||||||||| ||||||||| Sbjct: 1040 tcgccgccaaggacacgctcggcaa 1064
>gb|AC156643.2| Mus musculus BAC clone RP23-192O3 from chromosome 12, complete sequence Length = 197420 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 ctccaaccccacccagctctg 38 ||||||||||||||||||||| Sbjct: 104844 ctccaaccccacccagctctg 104864
>gb|AF217284.1|AF217284 Drosophila melanogaster protein tyrosine phosphatase Pez (Pez) mRNA, complete cds Length = 4433 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 281 tcgccgccaaggacaagctcggcaa 305 ||||||||||||||| ||||||||| Sbjct: 931 tcgccgccaaggacacgctcggcaa 955
>gb|AE003613.4| Drosophila melanogaster chromosome 2L, section 22 of 83 of the complete sequence Length = 280095 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 tcgccgccaaggacaagctcggcaa 305 ||||||||||||||| ||||||||| Sbjct: 119717 tcgccgccaaggacacgctcggcaa 119693
>gb|AC005285.1|AC005285 Drosophila melanogaster DNA sequence (P1s DS00121 (D128), DS05470 (D270), and DS00108 (D120)), complete sequence Length = 209071 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 281 tcgccgccaaggacaagctcggcaa 305 ||||||||||||||| ||||||||| Sbjct: 133071 tcgccgccaaggacacgctcggcaa 133047
>emb|CT009609.1| Desulfococcus multivorans vrl island Length = 89210 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 ctgggcttcggccgggagcgcatcc 103 |||||||||| |||||||||||||| Sbjct: 5593 ctgggcttcgaccgggagcgcatcc 5569
>ref|XM_529565.1| PREDICTED: Pan troglodytes LOC452570 (LOC452570), mRNA Length = 1461 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 cacatgcatggccggcagca 133 |||||||||||||||||||| Sbjct: 1177 cacatgcatggccggcagca 1158
>ref|NM_018094.2| Homo sapiens G1 to S phase transition 2 (GSPT2), mRNA Length = 2503 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 tcccggccggctccgggagcaacg 271 |||||||||||||||| ||||||| Sbjct: 441 tcccggccggctccggcagcaacg 464
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agcccgtcaagggcctgggc 84 |||||||||||||||||||| Sbjct: 1548385 agcccgtcaagggcctgggc 1548404
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cgccgccaaggacaagctcg 301 |||||||||||||||||||| Sbjct: 1291073 cgccgccaaggacaagctcg 1291092
>gb|AC148476.4| Homo sapiens 12 BAC RP13-714J12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 41737 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 cctgctgctgggcgccatct 202 |||||||||||||||||||| Sbjct: 3763 cctgctgctgggcgccatct 3744
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 agggcctgggcttcggccgg 93 |||||||||||||||||||| Sbjct: 540974 agggcctgggcttcggccgg 540955
>ref|XM_754954.1| Ustilago maydis 521 hypothetical protein (UM03900.1) partial mRNA Length = 3015 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 caagttcctctgcccttgcc 505 |||||||||||||||||||| Sbjct: 1628 caagttcctctgcccttgcc 1647
>gb|AC124358.4| Mus musculus BAC clone RP24-491B24 from chromosome 3, complete sequence Length = 161119 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 catgagcaagagggagctgatgaa 179 |||||||||||||||||| ||||| Sbjct: 31611 catgagcaagagggagcttatgaa 31588
>gb|AC125332.3| Mus musculus BAC clone RP23-113I20 from 3, complete sequence Length = 220068 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 gttcctctgcccttgccatg 508 |||||||||||||||||||| Sbjct: 148730 gttcctctgcccttgccatg 148711
>gb|AC121928.2| Mus musculus BAC clone RP24-204F1 from 3, complete sequence Length = 178387 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 gttcctctgcccttgccatg 508 |||||||||||||||||||| Sbjct: 151770 gttcctctgcccttgccatg 151789
>gb|AC140022.11| Medicago truncatula clone mth2-11g20, complete sequence Length = 104305 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 gccgcctccaaccccaccca 32 |||||||||||||||||||| Sbjct: 54126 gccgcctccaaccccaccca 54107
>emb|AL929101.4| Human DNA sequence from clone RP11-22B10 on chromosome X Contains the GSPT2 gene for G1 to S phase transition 2, a pseudogene similar to part of p30 (nuclear protein p30), a zinc finger protein pseudogene, the 5' end of a variant of the MAGED1 gene for melanoma antigen, family D, 1 and two CpG islands, complete sequence Length = 157110 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 tcccggccggctccgggagcaacg 271 |||||||||||||||| ||||||| Sbjct: 40213 tcccggccggctccggcagcaacg 40236
>emb|AL662824.9| Human DNA sequence from clone XXbac-22I16 on chromosome 6 contains the HLA-DPA1 gene for major histocompatibility complex, class II, DP alpha 1, the HLA-DPB1 gene for major histocompatibility complex, class II, DP beta 1, a ribosomal protein L32 (RPL32) pseudogene, the HLA-DPA2 pseudogene for major histocompatibility complex, class II, DP alpha 2, a pseudogene similar to part of collagens, a novel protein similar to major histocompatibility complex, class II, DP beta 2 (pseudogene), a major histocompatibility complex, class II, DP beta 1 pseudogene, two putative novel transcripts, the COL11A2 gene for collagen, type XI, alpha 2, the RXRB gene for retinoid X receptor, beta, the HKE4 gene for HLA-class II region expressed gene KE4, the 5' end of the HSD17B8 gene for hydroxysteroid (17-beta) dehydrogenase 8 and four CpG islands, complete sequence Length = 187964 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 aagttcctctgcccttgcca 506 |||||||||||||||||||| Sbjct: 38027 aagttcctctgcccttgcca 38046
>emb|AL645931.7| Human DNA sequence from clone XXbac-138A21 on chromosome 6 Contains the HLA-DOA, HLA-DPA1 and HLA-DPB1 genes for major histocompatibility complex class II proteins DO alpha, DP alpha 1 and DP beta 1, the HLA-DPA2 major histocompatibility complex class II DP alpha 2 pseudogene, ribosomal protein L32 pseudogene RPL32P1, a pseudogene similar to part of collagens, the 5' end of an HLA class II histocompatibility antigen D or S beta pseudogene, the 5' end of a novel protein similar to major histocompatibility complex class II DP beta 1 precursor and a CpG island, complete sequence Length = 124899 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 aagttcctctgcccttgcca 506 |||||||||||||||||||| Sbjct: 63737 aagttcctctgcccttgcca 63756
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 agggcctgggcttcggccgg 93 |||||||||||||||||||| Sbjct: 671285 agggcctgggcttcggccgg 671266
>ref|XM_783177.1| PREDICTED: Strongylocentrotus purpuratus similar to tripartite motif protein TRIM2 (LOC583257), mRNA Length = 1002 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gacatcctcgtcgaggattg 326 |||||||||||||||||||| Sbjct: 757 gacatcctcgtcgaggattg 776
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 gatgaacctcctgctgctgg 193 |||||||||||||||||||| Sbjct: 1354483 gatgaacctcctgctgctgg 1354502
>gb|BC036077.1| Homo sapiens G1 to S phase transition 2, mRNA (cDNA clone MGC:33729 IMAGE:5313878), complete cds Length = 2513 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 tcccggccggctccgggagcaacg 271 |||||||||||||||| ||||||| Sbjct: 441 tcccggccggctccggcagcaacg 464
>emb|AJ251548.1|HSA251548 Homo sapiens mRNA for polypeptide chain release factor 3b (GSPT2 gene) Length = 1887 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 tcccggccggctccgggagcaacg 271 |||||||||||||||| ||||||| Sbjct: 245 tcccggccggctccggcagcaacg 268
>emb|CR759795.4| Human DNA sequence from clone DAMC-206D4 on chromosome 6, complete sequence Length = 119898 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 aagttcctctgcccttgcca 506 |||||||||||||||||||| Sbjct: 58173 aagttcctctgcccttgcca 58192
>emb|AL133055.1|HSM801326 Homo sapiens mRNA; cDNA DKFZp434J1015 (from clone DKFZp434J1015) Length = 1904 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 acctcctgctgctgggcgcc 198 |||||||||||||||||||| Sbjct: 255 acctcctgctgctgggcgcc 236
>emb|CR861342.1| Pongo pygmaeus mRNA; cDNA DKFZp459J1511 (from clone DKFZp459J1511) Length = 2532 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 tcccggccggctccgggagcaacg 271 |||||||||||||||| ||||||| Sbjct: 459 tcccggccggctccggcagcaacg 482
>gb|AC009004.6| Homo sapiens chromosome 19 clone LLNLR-291B11, complete sequence Length = 39608 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cctccaaccccacccagctc 36 |||||||||||||||||||| Sbjct: 1207 cctccaaccccacccagctc 1226
>gb|AE005819.1| Caulobacter crescentus CB15 section 145 of 359 of the complete genome Length = 10591 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 aggggtcgccgccaaggacaagct 299 |||||||| ||||||||||||||| Sbjct: 457 aggggtcggcgccaaggacaagct 434
>dbj|AK023155.1| Homo sapiens cDNA FLJ13093 fis, clone NT2RP3002151, highly similar to G1 TO S PHASE TRANSITION PROTEIN 1 HOMOLOG Length = 2492 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 tcccggccggctccgggagcaacg 271 |||||||||||||||| ||||||| Sbjct: 431 tcccggccggctccggcagcaacg 454
>dbj|AK001303.1| Homo sapiens cDNA FLJ10441 fis, clone NT2RP1000733, highly similar to Human mRNA for GSPT1-TK protein Length = 2481 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 tcccggccggctccgggagcaacg 271 |||||||||||||||| ||||||| Sbjct: 425 tcccggccggctccggcagcaacg 448
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 299 tcggcaacgacatcctcgtcgagg 322 |||||||||||||| ||||||||| Sbjct: 2955467 tcggcaacgacatcatcgtcgagg 2955444
>gb|AC024585.6| Homo sapiens chromosome 19 clone LLNLF-194E9, complete sequence Length = 26400 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cctccaaccccacccagctc 36 |||||||||||||||||||| Sbjct: 5912 cctccaaccccacccagctc 5893
>ref|XM_498167.2| PREDICTED: Homo sapiens hypothetical protein DKFZp434J1015 (DKFZp434J1015), mRNA Length = 4839 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 acctcctgctgctgggcgcc 198 |||||||||||||||||||| Sbjct: 104 acctcctgctgctgggcgcc 85
>gb|AC073343.6| Homo sapiens BAC clone RP11-611L7 from 7, complete sequence Length = 173967 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 acctcctgctgctgggcgcc 198 |||||||||||||||||||| Sbjct: 7430 acctcctgctgctgggcgcc 7411
>gb|AC157941.4| Mus musculus BAC clone RP24-253I2 from chromosome 3, complete sequence Length = 204323 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 catgagcaagagggagctgatgaa 179 |||||||||||||||||| ||||| Sbjct: 34488 catgagcaagagggagcttatgaa 34511
>gb|AF336983.1|AF336983 Vaucheria litorea cytochrome b6f complex Rieske FeS protein mRNA, partial cds; nuclear gene for chloroplast product Length = 222 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 463 gtgccttggaacgccgccgagaacaagttcctctgcccttgccatggatcccagta 518 |||||||||||| || || ||||||||| |||| ||||||||||| || ||||| Sbjct: 73 gtgccttggaacaaggctgaaaacaagttcatctgtccttgccatgggtcgcagta 128
>gb|AC012451.8| Homo sapiens BAC clone RP11-414K19 from 2, complete sequence Length = 188121 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 caagttcctctgcccttgcc 505 |||||||||||||||||||| Sbjct: 179452 caagttcctctgcccttgcc 179433
>gb|AC055858.18| Homo sapiens chromosome 17, clone RP11-682M7, complete sequence Length = 167395 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 catgagcaagagggagctga 175 |||||||||||||||||||| Sbjct: 64910 catgagcaagagggagctga 64929
>gb|AE005063.1| Halobacterium sp. NRC-1 section 94 of 170 of the complete genome Length = 11844 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 337 cacggccccaacgaccgcacgctcgccc 364 |||| |||| |||||||||||||||||| Sbjct: 3212 cacgaccccgacgaccgcacgctcgccc 3239
>gb|AF203698.1|AF203698 Rattus norvegicus T calcium channel alpha1G subunit (Cacna1g) gene, partial cds Length = 4171 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 361 gcccaggggctcaagggtgatcct 384 |||||| ||||||||||||||||| Sbjct: 3845 gcccagaggctcaagggtgatcct 3868
>gb|U78518.1|HSU78518 Human cAMP-binding guanine nucleotide exchange factor III (cAMP-GEFIII) mRNA, clone 172, partial sequence Length = 854 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 attcggcacgaggccgcctc 20 |||||||||||||||||||| Sbjct: 2 attcggcacgaggccgcctc 21 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,481,553 Number of Sequences: 3902068 Number of extensions: 3481553 Number of successful extensions: 65278 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64591 Number of HSP's gapped (non-prelim): 664 length of query: 571 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 548 effective length of database: 17,143,297,704 effective search space: 9394527141792 effective search space used: 9394527141792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
