>TP53B_MOUSE (P70399) Tumor suppressor p53-binding protein 1 (p53-binding protein|
            1) (p53BP1) (53BP1)
          Length = 1957

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +3

Query: 252  SPGDYHAVSPRFFGAPTQHHSTGSWPVRCSYGSSSDGDGAPPANFDASGEEFVD 413
            S GD   +S     A + HH++    +   + S S G GA P    ASG E  D
Sbjct: 1280 SSGDLGDISSFSSKASSSHHTSSGTSLSAIHSSGSSGRGAGPLKGKASGTEAAD 1333

>Y159_METJA (Q57623) Hypothetical protein MJ0159|
          Length = 542

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +3

Query: 345 GSSSDGDGAPPANFDASGEEFVD--SSVMEAVELRCV 449
           G   +G+G  PANF   G EF++   +++E  EL+C+
Sbjct: 214 GIIENGEGYLPANFRYFGVEFLERFETILEIDELKCI 250

>RR7_CHLRE (P48267) Chloroplast 30S ribosomal protein S7|
          Length = 168

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
 Frame = -2

Query: 295 APKNLGDTAW*SPGETAPEALLRMRTRLSSWPPIREPEVRAGAAQRG----RIGPRMTSI 128
           A K +GD    +P E   +AL  +  R+       +P  RAGA Q      R+G R  + 
Sbjct: 46  ALKEIGDVTQKNPVEVFEKALDNVTPRVEV-----KPRRRAGAIQMVPRVLRLGDRARAN 100

Query: 127 SLFWIIVVTEHRS 89
           SL WI+   + RS
Sbjct: 101 SLRWIMEACDKRS 113

>ZYX_HUMAN (Q15942) Zyxin (Zyxin-2)|
          Length = 572

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -2

Query: 400 SPLASKFAGGAPSPSDDEP*LQRTGQEPVL*CWVGAPK 287
           +P+ASKF+ GAP  S  +P  Q+ G    L    G+P+
Sbjct: 274 TPVASKFSPGAPGGSGSQP-NQKLGHPEALSAGTGSPQ 310

>K0232_HUMAN (Q92628) Protein KIAA0232 (Fragment)|
          Length = 1402

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 336 CSYGSSSDGDGAPPANFDASGEEFVDS 416
           CSY SSS    APPA+ D S  +  +S
Sbjct: 208 CSYSSSSSSSTAPPASTDTSSPKDCNS 234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,111,552
Number of Sequences: 219361
Number of extensions: 1148774
Number of successful extensions: 3557
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3556
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)