>CLPP_DESDG (Q30Z79) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 200

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -2

Query: 158 ARMFGFLSSSLGPANLLAVPNTRALVSSPLSKVQARATTLPI 33
           A M  FL ++  P    A+PN+R ++  P+   Q +AT + I
Sbjct: 96  ASMGAFLLAAGQPGMRFALPNSRIMIHQPMGGAQGQATDIDI 137

>CLPP3_PROMP (Q7UZK7) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 215

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 158 ARMFGFLSSSLGPANLLAVPNTRALVSSPLSKVQARATTLPI 33
           A M  FL S       LA+PN+R ++  PL   Q +A  + I
Sbjct: 118 ASMGAFLLSGGAKGKRLALPNSRIMIHQPLGGAQGQAVEIEI 159

>CLPP3_PROMT (Q46ID4) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 194

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -2

Query: 158 ARMFGFLSSSLGPANLLAVPNTRALVSSPLSKVQARATTLPI 33
           A M  FL S       LA+PN+R ++  PL   Q +A  + I
Sbjct: 95  ASMGAFLLSGGTKGKRLALPNSRIMIHQPLGGAQGQAVEIEI 136

>PAAE_ECOLI (P76081) Probable phenylacetic acid degradation NADH oxidoreductase|
           paaE (EC 1.-.-.-)
          Length = 356

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 21  QSLRDRQRGRPGLHLRQGATDQGSRVRNGKKVCRT 125
           Q L++  R RPG HL   A+  G  +R    +CR+
Sbjct: 28  QPLQEAYRFRPGQHLTLKASFDGEELRRCYSICRS 62

>CLPP3_PROMA (Q7V9L6) ATP-dependent Clp protease proteolytic subunit 3 (EC|
           3.4.21.92) (Endopeptidase Clp 3)
          Length = 216

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 158 ARMFGFLSSSLGPANLLAVPNTRALVSSPLSKVQARATTLPI 33
           A M  FL +       LA+PN+R ++  PL   Q +A  + I
Sbjct: 119 ASMGAFLLAGGSKGKRLALPNSRIMIHQPLGGAQGQAVEIEI 160

>CLPP_CAMJR (Q5HWX6) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 194

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 158 ARMFGFLSSSLGPANLLAVPNTRALVSSPLSKVQARATTLPI 33
           A M  FL S        A+PN+R ++  PL   + +AT + I
Sbjct: 96  ASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEI 137

>CLPP_CAMJE (P54413) ATP-dependent Clp protease proteolytic subunit (EC|
           3.4.21.92) (Endopeptidase Clp)
          Length = 194

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -2

Query: 158 ARMFGFLSSSLGPANLLAVPNTRALVSSPLSKVQARATTLPI 33
           A M  FL S        A+PN+R ++  PL   + +AT + I
Sbjct: 96  ASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEI 137


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,787,407
Number of Sequences: 219361
Number of extensions: 368193
Number of successful extensions: 1092
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 80,573,946
effective HSP length: 29
effective length of database: 74,212,477
effective search space used: 1781099448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)