| Clone Name | baal30d16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY224493.1| Oryza sativa (japonica cultivar-group) isolate 30868 unknown mRNA Length = 1503 Score = 712 bits (359), Expect = 0.0 Identities = 518/571 (90%) Strand = Plus / Plus Query: 6 tttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactggctg 65 |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 791 tttcggtgggaggaaatggaagatcatatgttgttattcttgagactggtccgctggctg 850 Query: 66 acacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgtaggg 125 ||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 851 acacctcccagagcaagaagtactttgctcggatgactacaaaagtaggattttgtaggg 910 Query: 126 taagagtacctttttcggctttccgccctgtaaaaccagaagatcctcccctagaccctt 185 | || ||||| ||||| ||||| || || ||||| || ||||||||||||||||||||| Sbjct: 911 tgagggtaccattttcagcttttcggccagtaaaccctcaagatcctcccctagaccctt 970 Query: 186 ttcttgtgcataccttcacaattaggtttgaaccaaaaagacagagacctggtgatggaa 245 ||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 971 ttcttgtgcatacactaacaattaggtttgaacccaaaagacagagacctggtgatggat 1030 Query: 246 cacaaggtgccactgaccccagaaattttgagctgatactggagtacatcaaagcattac 305 | ||| |||| ||||||||||||||||||||||| ||| |||| ||||||||||| || | Sbjct: 1031 ctcaaagtgctactgaccccagaaattttgagcttatattggaatacatcaaagctttgc 1090 Query: 306 ctaccggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaaccta 365 |||| |||||||||||||||||||| |||||||||||| ||||||| || |||||||||| Sbjct: 1091 ctactggtcaagaaacagacttcattctggtctcatgctcaggttctgggattgaaccta 1150 Query: 366 acagaagagaacaagttctcaaagcaaagaaggctggggaggatgcgctaagaaggtcag 425 |||||||||||||||| ||||||||||| |||||||| |||||||| | |||||||||| Sbjct: 1151 acagaagagaacaagtcctcaaagcaaaaaaggctggagaggatgcattgagaaggtcag 1210 Query: 426 gccttggatacacaattgtacggcctggtccgctgcaggaagaacctggcggtcagcgtg 485 |||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 1211 gccttggatacacaatagtacgccctggtccactgcaggaagaacctggtggtcagcgtg 1270 Query: 486 cactgatctttgatcaaggaaacagaatctctcaggctatcagctgtgcggatgtagcag 545 || |||||||||||||||| ||||||||||| |||| |||||| || || |||||||||| Sbjct: 1271 cattgatctttgatcaagggaacagaatctcgcagggtatcagttgcgccgatgtagcag 1330 Query: 546 atatctgtgtcaaagcattgcatgattccac 576 |||| |||||||||||||||||||||||||| Sbjct: 1331 atatttgtgtcaaagcattgcatgattccac 1361
>dbj|AK120907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031L08, full insert sequence Length = 2197 Score = 712 bits (359), Expect = 0.0 Identities = 518/571 (90%) Strand = Plus / Plus Query: 6 tttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactggctg 65 |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1285 tttcggtgggaggaaatggaagatcatatgttgttattcttgagactggtccgctggctg 1344 Query: 66 acacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgtaggg 125 ||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 1345 acacctcccagagcaagaagtactttgctcggatgactacaaaagtaggattttgtaggg 1404 Query: 126 taagagtacctttttcggctttccgccctgtaaaaccagaagatcctcccctagaccctt 185 | || ||||| ||||| ||||| || || ||||| || ||||||||||||||||||||| Sbjct: 1405 tgagggtaccattttcagcttttcggccagtaaaccctcaagatcctcccctagaccctt 1464 Query: 186 ttcttgtgcataccttcacaattaggtttgaaccaaaaagacagagacctggtgatggaa 245 ||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1465 ttcttgtgcatacactaacaattaggtttgaacccaaaagacagagacctggtgatggat 1524 Query: 246 cacaaggtgccactgaccccagaaattttgagctgatactggagtacatcaaagcattac 305 | ||| |||| ||||||||||||||||||||||| ||| |||| ||||||||||| || | Sbjct: 1525 ctcaaagtgctactgaccccagaaattttgagcttatattggaatacatcaaagctttgc 1584 Query: 306 ctaccggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaaccta 365 |||| |||||||||||||||||||| |||||||||||| ||||||| || |||||||||| Sbjct: 1585 ctactggtcaagaaacagacttcattctggtctcatgctcaggttctgggattgaaccta 1644 Query: 366 acagaagagaacaagttctcaaagcaaagaaggctggggaggatgcgctaagaaggtcag 425 |||||||||||||||| ||||||||||| |||||||| |||||||| | |||||||||| Sbjct: 1645 acagaagagaacaagtcctcaaagcaaaaaaggctggagaggatgcattgagaaggtcag 1704 Query: 426 gccttggatacacaattgtacggcctggtccgctgcaggaagaacctggcggtcagcgtg 485 |||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||| Sbjct: 1705 gccttggatacacaatagtacgccctggtccactgcaggaagaacctggtggtcagcgtg 1764 Query: 486 cactgatctttgatcaaggaaacagaatctctcaggctatcagctgtgcggatgtagcag 545 || |||||||||||||||| ||||||||||| |||| |||||| || || |||||||||| Sbjct: 1765 cattgatctttgatcaagggaacagaatctcgcagggtatcagttgcgccgatgtagcag 1824 Query: 546 atatctgtgtcaaagcattgcatgattccac 576 |||| |||||||||||||||||||||||||| Sbjct: 1825 atatttgtgtcaaagcattgcatgattccac 1855
>ref|XM_464065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1797 Score = 448 bits (226), Expect = e-123 Identities = 496/586 (84%) Strand = Plus / Plus Query: 2 cttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactg 61 ||||| || ||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 1081 cttctatccgtgggtggaaatggaagatcatatgttatcatccttgagactggtccacta 1140 Query: 62 gctgacacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgt 121 ||||||||||| ||||| ||||| |||||||||||||||| || |||||||| ||||| Sbjct: 1141 gctgacacctcacagagcaagaaatattttgctcggatgaacactaaagtagggttttgc 1200 Query: 122 agggtaagagtacctttttcggctttccgccctgtaaaaccagaagatcctcccctagac 181 ||||| ||||| || || || | |||| | || || || ||| | || ||||| || ||| Sbjct: 1201 agggtgagagtgccgttctcagatttcaggccagtgaacccacaggaccctcctcttgac 1260 Query: 182 ccttttcttgtgcataccttcacaattaggtttgaaccaaaaagacagagacctggtgat 241 |||||||||||||| || || || || ||||||||||| |||| ||||||||||||||| Sbjct: 1261 ccttttcttgtgcacacattaaccataaggtttgaacccaaaaaacagagacctggtgac 1320 Query: 242 ggaacacaaggtgccactgaccccagaaattttgagctgatactggagtacatcaaagca 301 | ||||| || | |||||| |||||||| |||| ||| |||| | || ||||| Sbjct: 1321 tcgtctcaaggagctagtgacccaagaaatttccagcttataatggaatttataaaagct 1380 Query: 302 ttacctaccggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaa 361 ||||||| ||||||||||||||| | | |||| ||||||||||| || ||||| ||| Sbjct: 1381 ctacctactggtcaagaaacagacattgttttggtttcatgcacaggctctggaatcgaa 1440 Query: 362 cctaacagaagagaacaagttctcaaagcaaagaaggctggggaggatgcgctaagaagg 421 |||||||||||||||||||| |||||||||||||||||||| |||||||| || || || Sbjct: 1441 cctaacagaagagaacaagtcctcaaagcaaagaaggctggagaggatgcactgaggaga 1500 Query: 422 tcaggccttggatacacaattgtacggcctggtccgctgcaggaagaacctggcggtcag 481 || ||||| ||||| ||||||||| | || ||||| |||||||||||||||||||||||| Sbjct: 1501 tccggcctcggatatacaattgtatgcccaggtcctctgcaggaagaacctggcggtcag 1560 Query: 482 cgtgcactgatctttgatcaaggaaacagaatctctcaggctatcagctgtgcggatgta 541 ||||| ||||||||||||||||| |||||||||||||||| |||||||||||| || ||| Sbjct: 1561 cgtgctctgatctttgatcaagggaacagaatctctcagggtatcagctgtgccgacgta 1620 Query: 542 gcagatatctgtgtcaaagcattgcatgattccacggcgagaaaca 587 ||||||||||||||||| |||||||| ||||| || || ||||||| Sbjct: 1621 gcagatatctgtgtcaaggcattgcacgattcaacagcaagaaaca 1666
>gb|AY110583.1| Zea mays CL25181_-1 mRNA sequence Length = 594 Score = 293 bits (148), Expect = 3e-76 Identities = 259/296 (87%) Strand = Plus / Minus Query: 292 catcaaagcattacctaccggtcaagaaacagacttcatactggtctcatgcacaggttc 351 |||||| || |||||||| ||||||||||||||||||||| |||| ||||| ||||||| Sbjct: 593 catcaaggctttacctactggtcaagaaacagacttcatattggtgtcatgttcaggttc 534 Query: 352 cggaattgaacctaacagaagagaacaagttctcaaagcaaagaaggctggggaggatgc 411 || |||||| |||||||||||||||||||||||||||| ||||||||||| || ||||| Sbjct: 533 tgggattgaatctaacagaagagaacaagttctcaaagccaagaaggctggagaagatgc 474 Query: 412 gctaagaaggtcaggccttggatacacaattgtacggcctggtccgctgcaggaagaacc 471 || | ||||||||||||||||| ||||| || || || ||||| |||||||||||||| Sbjct: 473 actgcggaggtcaggccttggatatacaatcgtgcgcccgggtcctctgcaggaagaacc 414 Query: 472 tggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcaggctatcagctg 531 ||| || ||||| || |||||||| |||||||| ||||||||||| |||| ||||||||| Sbjct: 413 tggtggccagcgcgcgctgatcttcgatcaagggaacagaatctcccagggtatcagctg 354 Query: 532 tgcggatgtagcagatatctgtgtcaaagcattgcatgattccacggcgagaaaca 587 ||| ||||| || |||||||||||||| ||| ||||||||||||| |||||||||| Sbjct: 353 tgctgatgtggctgatatctgtgtcaaggcactgcatgattccactgcgagaaaca 298
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 190 bits (96), Expect = 4e-45 Identities = 117/124 (94%) Strand = Plus / Minus Query: 6 tttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactggctg 65 |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 29248652 tttcggtgggaggaaatggaagatcatatgttgttattcttgagactggtccgctggctg 29248593 Query: 66 acacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgtaggg 125 ||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 29248592 acacctcccagagcaagaagtactttgctcggatgactacaaaagtaggattttgtaggg 29248533 Query: 126 taag 129 |||| Sbjct: 29248532 taag 29248529 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 311 ggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaacctaacaga 370 |||||||||||||||||||| |||||||||||| ||||||| || ||||||||||||||| Sbjct: 29247836 ggtcaagaaacagacttcattctggtctcatgctcaggttctgggattgaacctaacaga 29247777 Query: 371 agagaacaagttctcaaagcaaagaagg 398 ||||||||||| ||||||||||| |||| Sbjct: 29247776 agagaacaagtcctcaaagcaaaaaagg 29247749 Score = 101 bits (51), Expect = 3e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 131 gtacctttttcggctttccgccctgtaaaaccagaagatcctcccctagacccttttctt 190 ||||| ||||| ||||| || || ||||| || |||||||||||||||||||||||||| Sbjct: 29248416 gtaccattttcagcttttcggccagtaaaccctcaagatcctcccctagacccttttctt 29248357 Query: 191 gtgcataccttcacaattaggtttgaaccaaaaagacag 229 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 29248356 gtgcatacactaacaattaggtttgaacccaaaagacag 29248318 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 227 cagagacctggtgatggaacacaaggtgccactgaccccagaaattttgagctgatactg 286 |||||||||||||||||| | ||| |||| ||||||||||||||||||||||| ||| || Sbjct: 29248216 cagagacctggtgatggatctcaaagtgctactgaccccagaaattttgagcttatattg 29248157 Query: 287 gagtacatcaaagc 300 || ||||||||||| Sbjct: 29248156 gaatacatcaaagc 29248143 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 461 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcag 520 |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| ||| Sbjct: 29247363 caggaagaacctggtggtcagcgtgcattgatctttgatcaagggaacagaatctcgcag 29247304 Query: 521 g 521 | Sbjct: 29247303 g 29247303 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 396 aggctggggaggatgcgctaagaaggtcaggccttggatacacaattgtacggcctggtc 455 ||||||| |||||||| | |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 29247664 aggctggagaggatgcattgagaaggtcaggccttggatacacaatagtacgccctggtc 29247605 Query: 456 cgctgcagg 464 | ||||||| Sbjct: 29247604 cactgcagg 29247596 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 523 tatcagctgtgcggatgtagcagatatctgtgtcaaagcattgcatgattccac 576 |||||| || || |||||||||||||| |||||||||||||||||||||||||| Sbjct: 29247213 tatcagttgcgccgatgtagcagatatttgtgtcaaagcattgcatgattccac 29247160
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 190 bits (96), Expect = 4e-45 Identities = 117/124 (94%) Strand = Plus / Minus Query: 6 tttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactggctg 65 |||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 11450 tttcggtgggaggaaatggaagatcatatgttgttattcttgagactggtccgctggctg 11391 Query: 66 acacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgtaggg 125 ||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 11390 acacctcccagagcaagaagtactttgctcggatgactacaaaagtaggattttgtaggg 11331 Query: 126 taag 129 |||| Sbjct: 11330 taag 11327 Score = 127 bits (64), Expect = 4e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 311 ggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaacctaacaga 370 |||||||||||||||||||| |||||||||||| ||||||| || ||||||||||||||| Sbjct: 10634 ggtcaagaaacagacttcattctggtctcatgctcaggttctgggattgaacctaacaga 10575 Query: 371 agagaacaagttctcaaagcaaagaagg 398 ||||||||||| ||||||||||| |||| Sbjct: 10574 agagaacaagtcctcaaagcaaaaaagg 10547 Score = 101 bits (51), Expect = 3e-18 Identities = 87/99 (87%) Strand = Plus / Minus Query: 131 gtacctttttcggctttccgccctgtaaaaccagaagatcctcccctagacccttttctt 190 ||||| ||||| ||||| || || ||||| || |||||||||||||||||||||||||| Sbjct: 11214 gtaccattttcagcttttcggccagtaaaccctcaagatcctcccctagacccttttctt 11155 Query: 191 gtgcataccttcacaattaggtttgaaccaaaaagacag 229 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 11154 gtgcatacactaacaattaggtttgaacccaaaagacag 11116 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 227 cagagacctggtgatggaacacaaggtgccactgaccccagaaattttgagctgatactg 286 |||||||||||||||||| | ||| |||| ||||||||||||||||||||||| ||| || Sbjct: 11014 cagagacctggtgatggatctcaaagtgctactgaccccagaaattttgagcttatattg 10955 Query: 287 gagtacatcaaagc 300 || ||||||||||| Sbjct: 10954 gaatacatcaaagc 10941 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 461 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcag 520 |||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| ||| Sbjct: 10161 caggaagaacctggtggtcagcgtgcattgatctttgatcaagggaacagaatctcgcag 10102 Query: 521 g 521 | Sbjct: 10101 g 10101 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 396 aggctggggaggatgcgctaagaaggtcaggccttggatacacaattgtacggcctggtc 455 ||||||| |||||||| | |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 10462 aggctggagaggatgcattgagaaggtcaggccttggatacacaatagtacgccctggtc 10403 Query: 456 cgctgcagg 464 | ||||||| Sbjct: 10402 cactgcagg 10394 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 523 tatcagctgtgcggatgtagcagatatctgtgtcaaagcattgcatgattccac 576 |||||| || || |||||||||||||| |||||||||||||||||||||||||| Sbjct: 10011 tatcagttgcgccgatgtagcagatatttgtgtcaaagcattgcatgattccac 9958
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 143 bits (72), Expect = 7e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 2 cttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactg 61 ||||| || ||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 2003678 cttctatccgtgggtggaaatggaagatcatatgttatcatccttgagactggtccacta 2003737 Query: 62 gctgacacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgt 121 ||||||||||| ||||| ||||| |||||||||||||||| || |||||||| ||||| Sbjct: 2003738 gctgacacctcacagagcaagaaatattttgctcggatgaacactaaagtagggttttgc 2003797 Query: 122 agggtaag 129 |||||||| Sbjct: 2003798 agggtaag 2003805 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 461 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcag 520 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 2004833 caggaagaacctggcggtcagcgtgctctgatctttgatcaagggaacagaatctctcag 2004892 Query: 521 g 521 | Sbjct: 2004893 g 2004893 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 311 ggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaacctaacaga 370 ||||||||||||||| | | |||| ||||||||||| || ||||| |||||||||||| Sbjct: 2004267 ggtcaagaaacagacattgttttggtttcatgcacaggctctggaatcgaacctaacaga 2004326 Query: 371 agagaacaagttctcaaagcaaagaagg 398 ||||||||||| |||||||||||||||| Sbjct: 2004327 agagaacaagtcctcaaagcaaagaagg 2004354 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 518 caggctatcagctgtgcggatgtagcagatatctgtgtcaaagcattgcatgattccacg 577 |||| |||||||||||| || |||||||||||||||||||| |||||||| ||||| || Sbjct: 2004993 cagggtatcagctgtgccgacgtagcagatatctgtgtcaaggcattgcacgattcaaca 2005052 Query: 578 gcgagaaaca 587 || ||||||| Sbjct: 2005053 gcaagaaaca 2005062 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Plus Query: 170 cctcccctagacccttttcttgtgcataccttcacaattaggtttgaaccaaaaagacag 229 ||||| || ||||||||||||||||| || || || || ||||||||||| |||| |||| Sbjct: 2003950 cctcctcttgacccttttcttgtgcacacattaaccataaggtttgaacccaaaaaacag 2004009 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tctctcaggctatcagctgt 532 |||||||||||||||||||| Sbjct: 31669167 tctctcaggctatcagctgt 31669186
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 143 bits (72), Expect = 7e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 2 cttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactg 61 ||||| || ||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 53886 cttctatccgtgggtggaaatggaagatcatatgttatcatccttgagactggtccacta 53945 Query: 62 gctgacacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgt 121 ||||||||||| ||||| ||||| |||||||||||||||| || |||||||| ||||| Sbjct: 53946 gctgacacctcacagagcaagaaatattttgctcggatgaacactaaagtagggttttgc 54005 Query: 122 agggtaag 129 |||||||| Sbjct: 54006 agggtaag 54013 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 461 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcag 520 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 55041 caggaagaacctggcggtcagcgtgctctgatctttgatcaagggaacagaatctctcag 55100 Query: 521 g 521 | Sbjct: 55101 g 55101 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 311 ggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaacctaacaga 370 ||||||||||||||| | | |||| ||||||||||| || ||||| |||||||||||| Sbjct: 54475 ggtcaagaaacagacattgttttggtttcatgcacaggctctggaatcgaacctaacaga 54534 Query: 371 agagaacaagttctcaaagcaaagaagg 398 ||||||||||| |||||||||||||||| Sbjct: 54535 agagaacaagtcctcaaagcaaagaagg 54562 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 518 caggctatcagctgtgcggatgtagcagatatctgtgtcaaagcattgcatgattccacg 577 |||| |||||||||||| || |||||||||||||||||||| |||||||| ||||| || Sbjct: 55201 cagggtatcagctgtgccgacgtagcagatatctgtgtcaaggcattgcacgattcaaca 55260 Query: 578 gcgagaaaca 587 || ||||||| Sbjct: 55261 gcaagaaaca 55270 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Plus Query: 170 cctcccctagacccttttcttgtgcataccttcacaattaggtttgaaccaaaaagacag 229 ||||| || ||||||||||||||||| || || || || ||||||||||| |||| |||| Sbjct: 54158 cctcctcttgacccttttcttgtgcacacattaaccataaggtttgaacccaaaaaacag 54217
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 143 bits (72), Expect = 7e-31 Identities = 114/128 (89%) Strand = Plus / Plus Query: 2 cttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactg 61 ||||| || ||||||||||||||||||||||||||| | || ||||||||||||||||| Sbjct: 143239 cttctatccgtgggtggaaatggaagatcatatgttatcatccttgagactggtccacta 143298 Query: 62 gctgacacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgt 121 ||||||||||| ||||| ||||| |||||||||||||||| || |||||||| ||||| Sbjct: 143299 gctgacacctcacagagcaagaaatattttgctcggatgaacactaaagtagggttttgc 143358 Query: 122 agggtaag 129 |||||||| Sbjct: 143359 agggtaag 143366 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 461 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcag 520 |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 144394 caggaagaacctggcggtcagcgtgctctgatctttgatcaagggaacagaatctctcag 144453 Query: 521 g 521 | Sbjct: 144454 g 144454 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Plus Query: 311 ggtcaagaaacagacttcatactggtctcatgcacaggttccggaattgaacctaacaga 370 ||||||||||||||| | | |||| ||||||||||| || ||||| |||||||||||| Sbjct: 143828 ggtcaagaaacagacattgttttggtttcatgcacaggctctggaatcgaacctaacaga 143887 Query: 371 agagaacaagttctcaaagcaaagaagg 398 ||||||||||| |||||||||||||||| Sbjct: 143888 agagaacaagtcctcaaagcaaagaagg 143915 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 518 caggctatcagctgtgcggatgtagcagatatctgtgtcaaagcattgcatgattccacg 577 |||| |||||||||||| || |||||||||||||||||||| |||||||| ||||| || Sbjct: 144554 cagggtatcagctgtgccgacgtagcagatatctgtgtcaaggcattgcacgattcaaca 144613 Query: 578 gcgagaaaca 587 || ||||||| Sbjct: 144614 gcaagaaaca 144623 Score = 48.1 bits (24), Expect = 0.033 Identities = 51/60 (85%) Strand = Plus / Plus Query: 170 cctcccctagacccttttcttgtgcataccttcacaattaggtttgaaccaaaaagacag 229 ||||| || ||||||||||||||||| || || || || ||||||||||| |||| |||| Sbjct: 143511 cctcctcttgacccttttcttgtgcacacattaaccataaggtttgaacccaaaaaacag 143570
>ref|NM_101533.3| Arabidopsis thaliana oxidoreductase AT1G16720 mRNA, complete cds Length = 2100 Score = 129 bits (65), Expect = 1e-26 Identities = 242/301 (80%) Strand = Plus / Plus Query: 287 gagtacatcaaagcattacctaccggtcaagaaacagacttcatactggtctcatgcaca 346 |||||||| ||||| || ||| | ||||||||||||||||| || ||||| || || || Sbjct: 1439 gagtacataaaagctttgcctgcgggtcaagaaacagactttattctggtatcgtgtact 1498 Query: 347 ggttccggaattgaacctaacagaagagaacaagttctcaaagcaaagaaggctggggag 406 ||||| ||| | ||| | |||||||| || ||||| | ||||| |||| |||||| || Sbjct: 1499 ggttcgggagtagaagccaacagaagggagcaagtgttgaaagctaagagggctggtgaa 1558 Query: 407 gatgcgctaagaaggtcaggccttggatacacaattgtacggcctggtccgctgcaggaa 466 ||| | |||| || |||||||||||||||||||| | || |||||||| || |||| Sbjct: 1559 gattctttaaggagatcaggccttggatacacaatcattcgtcctggtcccttgaaggag 1618 Query: 467 gaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcaggctatc 526 ||||| ||||| || || || ||||| |||||||||||||||||||| ||||||| || Sbjct: 1619 gaaccaggcgggcaacgagctctgatatttgatcaaggaaacagaatttctcagggcatt 1678 Query: 527 agctgtgcggatgtagcagatatctgtgtcaaagcattgcatgattccacggcgagaaac 586 || || |||||||| || ||||| |||||||| ||| |||| ||||| || || |||||| Sbjct: 1679 agttgcgcggatgtggctgatatatgtgtcaaggcactgcacgattcaaccgccagaaac 1738 Query: 587 a 587 | Sbjct: 1739 a 1739 Score = 67.9 bits (34), Expect = 4e-08 Identities = 190/242 (78%) Strand = Plus / Plus Query: 3 ttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactgg 62 ||||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| Sbjct: 1152 ttctttctgttggtgggaatggaagatcctatgttgtaatccttgaagctggtccatcat 1211 Query: 63 ctgacacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgta 122 | || | || ||||| || ||||||| ||| |||| | ||| |||| ||| |||||| Sbjct: 1212 cagatatgtctcagagcaaacagtatttcgctaggatcagtaccaaagcagggttttgtc 1271 Query: 123 gggtaagagtacctttttcggctttccgccctgtaaaaccagaagatcctcccctagacc 182 ||||||| || || ||||| ||||| || || || || ||||||||||| || ||||| | Sbjct: 1272 gggtaagggtgccattttcagcttttcgaccggtcaacccagaagatccaccgctagatc 1331 Query: 183 cttttcttgtgcataccttcacaattaggtttgaaccaaaaagacagagacctggtgatg 242 | |||||||| || || || ||||| | ||||| || ||||||||||| |||| ||||| Sbjct: 1332 catttcttgttcacacattgacaatacgctttgagcctaaaagacagaggcctgttgatg 1391 Query: 243 ga 244 || Sbjct: 1392 ga 1393
>gb|AY128723.1| Arabidopsis thaliana unknown protein (At1g16720) mRNA, complete cds Length = 1863 Score = 129 bits (65), Expect = 1e-26 Identities = 242/301 (80%) Strand = Plus / Plus Query: 287 gagtacatcaaagcattacctaccggtcaagaaacagacttcatactggtctcatgcaca 346 |||||||| ||||| || ||| | ||||||||||||||||| || ||||| || || || Sbjct: 1366 gagtacataaaagctttgcctgcgggtcaagaaacagactttattctggtatcgtgtact 1425 Query: 347 ggttccggaattgaacctaacagaagagaacaagttctcaaagcaaagaaggctggggag 406 ||||| ||| | ||| | |||||||| || ||||| | ||||| |||| |||||| || Sbjct: 1426 ggttcgggagtagaagccaacagaagggagcaagtgttgaaagctaagagggctggtgaa 1485 Query: 407 gatgcgctaagaaggtcaggccttggatacacaattgtacggcctggtccgctgcaggaa 466 ||| | |||| || |||||||||||||||||||| | || |||||||| || |||| Sbjct: 1486 gattctttaaggagatcaggccttggatacacaatcattcgtcctggtcccttgaaggag 1545 Query: 467 gaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcaggctatc 526 ||||| ||||| || || || ||||| |||||||||||||||||||| ||||||| || Sbjct: 1546 gaaccaggcgggcaacgagctctgatatttgatcaaggaaacagaatttctcagggcatt 1605 Query: 527 agctgtgcggatgtagcagatatctgtgtcaaagcattgcatgattccacggcgagaaac 586 || || |||||||| || ||||| |||||||| ||| |||| ||||| || || |||||| Sbjct: 1606 agttgcgcggatgtggctgatatatgtgtcaaggcactgcacgattcaaccgccagaaac 1665 Query: 587 a 587 | Sbjct: 1666 a 1666 Score = 67.9 bits (34), Expect = 4e-08 Identities = 190/242 (78%) Strand = Plus / Plus Query: 3 ttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactgg 62 ||||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| Sbjct: 1079 ttctttctgttggtgggaatggaagatcctatgttgtaatccttgaagctggtccatcat 1138 Query: 63 ctgacacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgta 122 | || | || ||||| || ||||||| ||| |||| | ||| |||| ||| |||||| Sbjct: 1139 cagatatgtctcagagcaaacagtatttcgctaggatcagtaccaaagcagggttttgtc 1198 Query: 123 gggtaagagtacctttttcggctttccgccctgtaaaaccagaagatcctcccctagacc 182 ||||||| || || ||||| ||||| || || || || ||||||||||| || ||||| | Sbjct: 1199 gggtaagggtgccattttcagcttttcgaccggtcaacccagaagatccaccgctagatc 1258 Query: 183 cttttcttgtgcataccttcacaattaggtttgaaccaaaaagacagagacctggtgatg 242 | |||||||| || || || ||||| | ||||| || ||||||||||| |||| ||||| Sbjct: 1259 catttcttgttcacacattgacaatacgctttgagcctaaaagacagaggcctgttgatg 1318 Query: 243 ga 244 || Sbjct: 1319 ga 1320
>gb|AY062632.1| Arabidopsis thaliana Unknown protein (At1g16720; F17F16.7) mRNA, complete cds Length = 2040 Score = 129 bits (65), Expect = 1e-26 Identities = 242/301 (80%) Strand = Plus / Plus Query: 287 gagtacatcaaagcattacctaccggtcaagaaacagacttcatactggtctcatgcaca 346 |||||||| ||||| || ||| | ||||||||||||||||| || ||||| || || || Sbjct: 1439 gagtacataaaagctttgcctgcgggtcaagaaacagactttattctggtatcgtgtact 1498 Query: 347 ggttccggaattgaacctaacagaagagaacaagttctcaaagcaaagaaggctggggag 406 ||||| ||| | ||| | |||||||| || ||||| | ||||| |||| |||||| || Sbjct: 1499 ggttcgggagtagaagccaacagaagggagcaagtgttgaaagctaagagggctggtgaa 1558 Query: 407 gatgcgctaagaaggtcaggccttggatacacaattgtacggcctggtccgctgcaggaa 466 ||| | |||| || |||||||||||||||||||| | || |||||||| || |||| Sbjct: 1559 gattctttaaggagatcaggccttggatacacaatcattcgtcctggtcccttgaaggag 1618 Query: 467 gaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcaggctatc 526 ||||| ||||| || || || ||||| |||||||||||||||||||| ||||||| || Sbjct: 1619 gaaccaggcgggcaacgagctctgatatttgatcaaggaaacagaatttctcagggcatt 1678 Query: 527 agctgtgcggatgtagcagatatctgtgtcaaagcattgcatgattccacggcgagaaac 586 || || |||||||| || ||||| |||||||| ||| |||| ||||| || || |||||| Sbjct: 1679 agttgcgcggatgtggctgatatatgtgtcaaggcactgcacgattcaaccgccagaaac 1738 Query: 587 a 587 | Sbjct: 1739 a 1739 Score = 67.9 bits (34), Expect = 4e-08 Identities = 190/242 (78%) Strand = Plus / Plus Query: 3 ttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtccactgg 62 ||||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| Sbjct: 1152 ttctttctgttggtgggaatggaagatcctatgttgtaatccttgaagctggtccatcat 1211 Query: 63 ctgacacctcgcagagtaagaagtattttgctcggatgactacaaaagtaggcttttgta 122 | || | || ||||| || ||||||| ||| |||| | ||| |||| ||| |||||| Sbjct: 1212 cagatatgtctcagagcaaacagtatttcgctaggatcagtaccaaagcagggttttgtc 1271 Query: 123 gggtaagagtacctttttcggctttccgccctgtaaaaccagaagatcctcccctagacc 182 ||||||| || || ||||| ||||| || || || || ||||||||||| || ||||| | Sbjct: 1272 gggtaagggtgccattttcagcttttcgaccggtcaacccagaagatccaccgctagatc 1331 Query: 183 cttttcttgtgcataccttcacaattaggtttgaaccaaaaagacagagacctggtgatg 242 | |||||||| || || || ||||| | ||||| || ||||||||||| |||| ||||| Sbjct: 1332 catttcttgttcacacattgacaatacgctttgagcctaaaagacagaggcctgttgatg 1391 Query: 243 ga 244 || Sbjct: 1392 ga 1393
>gb|AC144538.23| Medicago truncatula clone mth2-31l21, complete sequence Length = 135050 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 461 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctc 518 |||||||||||||| || |||||||| || || |||||||||||| ||||||| |||| Sbjct: 45235 caggaagaacctggtgggcagcgtgctctaatatttgatcaaggagacagaatatctc 45292 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 177 tagacccttttcttgtgcataccttcacaattaggtttgaaccaaaaagacag 229 |||||||||||||||| ||||| || ||||| ||||||| || | ||||||| Sbjct: 42878 tagacccttttcttgtacatacattaacaatacggtttgagcctagaagacag 42930 Score = 40.1 bits (20), Expect = 8.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 103 tacaaaagtaggcttttgtagggtaaga 130 ||||||||| || ||||||||||||||| Sbjct: 42662 tacaaaagtgggattttgtagggtaaga 42689
>gb|AC011808.4|AC011808 Arabidopsis thaliana chromosome I BAC F19K19 genomic sequence, complete sequence Length = 93485 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 462 aggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcagg 521 |||| ||||| ||||| || || || ||||| |||||||||||||||||||| ||||||| Sbjct: 12992 aggaggaaccaggcgggcaacgagctctgatatttgatcaaggaaacagaatttctcagg 12933 Score = 48.1 bits (24), Expect = 0.033 Identities = 48/56 (85%) Strand = Plus / Minus Query: 3 ttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtcca 58 ||||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| Sbjct: 13968 ttctttctgttggtgggaatggaagatcctatgttgtaatccttgaagctggtcca 13913 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 tcaggccttggatacacaat 441 |||||||||||||||||||| Sbjct: 13098 tcaggccttggatacacaat 13079
>gb|AC026237.4|AC026237 Arabidopsis thaliana chromosome I BAC F17F16 genomic sequence, complete sequence Length = 90498 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 462 aggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcagg 521 |||| ||||| ||||| || || || ||||| |||||||||||||||||||| ||||||| Sbjct: 75269 aggaggaaccaggcgggcaacgagctctgatatttgatcaaggaaacagaatttctcagg 75210 Score = 48.1 bits (24), Expect = 0.033 Identities = 48/56 (85%) Strand = Plus / Minus Query: 3 ttctttcagtgggtggaaatggaagatcatatgttgttattcttgagactggtcca 58 ||||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| Sbjct: 76245 ttctttctgttggtgggaatggaagatcctatgttgtaatccttgaagctggtcca 76190 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 tcaggccttggatacacaat 441 |||||||||||||||||||| Sbjct: 75375 tcaggccttggatacacaat 75356
>dbj|AP007265.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11L01, TM1658, complete sequence Length = 99089 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Minus Query: 461 caggaagaacctggcggtcagcgtgcactgatctttgatcaaggaaacagaatctctcag 520 |||||||||||||| || ||||| || || || |||||||||||||| |||| |||||| Sbjct: 26564 caggaagaacctggtgggcagcgcgctctaatatttgatcaaggaaatcgaatatctcag 26505 Query: 521 g 521 | Sbjct: 26504 g 26504 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 103 tacaaaagtaggcttttgtagggtaagagta 133 ||||||||| || |||||||||||||||||| Sbjct: 29772 tacaaaagtgggattttgtagggtaagagta 29742 Score = 40.1 bits (20), Expect = 8.0 Identities = 53/64 (82%) Strand = Plus / Minus Query: 524 atcagctgtgcggatgtagcagatatctgtgtcaaagcattgcatgattccacggcgaga 583 ||||||||||| ||||| || ||||| ||||| || ||| | |||||||| || || ||| Sbjct: 26352 atcagctgtgctgatgtggctgatatatgtgtgaaggcactacatgattcaactgcaaga 26293 Query: 584 aaca 587 |||| Sbjct: 26292 aaca 26289
>gb|AF233439.7| Homo sapiens chromosome 8 clones GS1-24F4, CTD-2629I16 map p23.1, complete sequences Length = 231283 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 gatcatatgttgttattcttgagac 51 |||||||||| |||||||||||||| Sbjct: 63666 gatcatatgtggttattcttgagac 63690
>gb|AF205406.5| Homo sapiens chromosome 8 clone SCb-633e22 map p23.1, complete sequence Length = 168907 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 gatcatatgttgttattcttgagac 51 |||||||||| |||||||||||||| Sbjct: 16373 gatcatatgtggttattcttgagac 16397
>gb|AF298854.5| Homo sapiens chromosome 8 clone SCb-207i3 map p23.1, complete sequence Length = 110283 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 gatcatatgttgttattcttgagac 51 |||||||||| |||||||||||||| Sbjct: 26394 gatcatatgtggttattcttgagac 26418
>gb|AY342055.1| Siphonodentalium lobatum mitochondrion, complete genome Length = 13932 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 ggtccgctgcaggaagaacct 472 ||||||||||||||||||||| Sbjct: 7677 ggtccgctgcaggaagaacct 7657
>gb|AC118470.2| Homo sapiens chromosome 1 clone RP11-634B7, complete sequence Length = 59105 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 ttcagtgggtggaaatggaag 27 ||||||||||||||||||||| Sbjct: 9478 ttcagtgggtggaaatggaag 9458
>gb|AC008919.9| Homo sapiens chromosome 5 clone CTD-2276O24, complete sequence Length = 106689 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 agcaaagaaggctggggagga 408 ||||||||||||||||||||| Sbjct: 56863 agcaaagaaggctggggagga 56843
>gb|AC022441.5| Homo sapiens chromosome 5 clone RP11-317O24, complete sequence Length = 193057 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 agcaaagaaggctggggagga 408 ||||||||||||||||||||| Sbjct: 175202 agcaaagaaggctggggagga 175222
>gb|AC133940.4| Mus musculus BAC clone RP23-433D1 from 16, complete sequence Length = 172079 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 356 attgaacctaacagaagagaa 376 ||||||||||||||||||||| Sbjct: 122993 attgaacctaacagaagagaa 123013
>emb|AL606921.6| Mouse DNA sequence from clone RP23-209C6 on chromosome 4, complete sequence Length = 173639 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 agacagagacctggtgatgga 244 ||||||||||||||||||||| Sbjct: 114597 agacagagacctggtgatgga 114617
>emb|AL831770.3| Human DNA sequence from clone RP13-297M11 on chromosome 1, complete sequence Length = 151857 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 388 agcaaagaaggctggggagga 408 ||||||||||||||||||||| Sbjct: 47494 agcaaagaaggctggggagga 47514
>gb|AC121842.3| Mus musculus BAC clone RP24-80L24 from chromosome 3, complete sequence Length = 173273 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 aaatggaagatcatatgttg 38 |||||||||||||||||||| Sbjct: 73076 aaatggaagatcatatgttg 73057
>emb|AL627132.4| Zebrafish DNA sequence from clone RP71-1H3 in linkage group 13 Contains part of a putative novel gene, a novel LINE element similar to X. laevis TX1 and two CpG islands, complete sequence Length = 146039 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 agcaaagaaggctggggagg 407 |||||||||||||||||||| Sbjct: 122095 agcaaagaaggctggggagg 122076
>gb|AC087732.11| Homo sapiens chromosome 15, clone RP11-565O12, complete sequence Length = 40080 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 556 caaagcattgcatgattcca 575 |||||||||||||||||||| Sbjct: 8248 caaagcattgcatgattcca 8229
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tctctcaggctatcagctgt 532 |||||||||||||||||||| Sbjct: 48954 tctctcaggctatcagctgt 48973
>gb|AC154178.1| Mus musculus BAC clone RP23-465N18 from 17, complete sequence Length = 191399 Score = 40.1 bits (20), Expect = 8.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 atatctgtgtcaaagcattgcatg 569 |||| ||||||||||||||||||| Sbjct: 72803 atatatgtgtcaaagcattgcatg 72826 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,224,804 Number of Sequences: 3902068 Number of extensions: 5224804 Number of successful extensions: 94869 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94695 Number of HSP's gapped (non-prelim): 168 length of query: 587 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 564 effective length of database: 17,143,297,704 effective search space: 9668819905056 effective search space used: 9668819905056 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)