ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal30d09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY107563.1| Zea mays PCO093543 mRNA sequence Length = 995 Score = 297 bits (150), Expect = 2e-77 Identities = 246/278 (88%) Strand = Plus / Plus Query: 14 ggacaacatccgcatggcgatgcactggctggtgcaggggtgcagctacggcgactccct 73 |||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 44 ggacaacatccggatggcgatgcagtggctggtgcaggggtgcagcagcggcgactccct 103 Query: 74 ggtgttccagttctccggcatgggcgcgcaggtccccgacgacgacggcgacgagctgga 133 ||||||||| ||||| || |||||||||||||| |||||| ||| ||||||||| ||| Sbjct: 104 ggtgttccacttctctgggctgggcgcgcaggtcgccgacgcggactgcgacgagcagga 163 Query: 134 cggcatggacgaggccctctgccccgtggactcgttccagcagggccccatcctggacga 193 ||| ||||||||| ||||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 164 cgggtacgacgaggccatctgcccggtggactcgttccagaagggccccatcctggacga 223 Query: 194 cgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgccatcgt 253 ||||||||||||| |||||||||| ||||| |||| ||||| |||||| |||||| |||| Sbjct: 224 cgagatcaacgagaccatcgtccggccgctggtgcccggcgccaagctccacgccgtcgt 283 Query: 254 cgatgcctgccacagcgccaccgtcctcgacctcccct 291 ||| || |||||||||| |||||||||||||||||| Sbjct: 284 cgacgcgtgccacagcgattccgtcctcgacctcccct 321 Score = 85.7 bits (43), Expect = 2e-13 Identities = 159/197 (80%), Gaps = 3/197 (1%) Strand = Plus / Plus Query: 352 cgggcgcctgcaagggcaccagcggaggccaggccgtgctcatcagtggcagcagcaacg 411 |||||| |||||||||||| ||||| |||||||| ||||| ||||| ||| |||| ||| Sbjct: 379 cgggcgtctgcaagggcacgagcggcggccaggcggtgcttatcagcggctacagcgacg 438 Query: 412 ggaagagcaacatgagcgtgctgcctgagccctacgccacgatcggcgccatgacgcaca 471 | || ||||| | ||| || ||| ||| ||| ||| || | || |||||||| |||| Sbjct: 439 gcaaaagcaagttcagcatgacgccggaggcctgcgcggcggtgggggccatgacccaca 498 Query: 472 gcttcatcagagcggtggagtgcgagccgc---gcaccacctacggccgcctgctcacct 528 ||||||||| |||||||| |||||||| | | ||||||||||||||||||||||| Sbjct: 499 gcttcatcaaggcggtggaatgcgagccccagggggtcacctacggccgcctgctcacct 558 Query: 529 ccatgagggccatcatg 545 |||||| ||||||||| Sbjct: 559 ccatgaaagccatcatg 575
>ref|XM_470787.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1481 Score = 281 bits (142), Expect = 1e-72 Identities = 241/274 (87%) Strand = Plus / Plus Query: 18 aacatccgcatggcgatgcactggctggtgcaggggtgcagctacggcgactccctggtg 77 |||||| | ||||||||| |||||||||||||||||||||||| ||| ||||| |||||| Sbjct: 503 aacatcaggatggcgatgaactggctggtgcaggggtgcagctccggtgactcgctggtg 562 Query: 78 ttccagttctccggcatgggcgcgcaggtccccgacgacgacggcgacgagctggacggc 137 ||||| |||||||| || || | |||||| || |||||||||||||||||| ||||||| Sbjct: 563 ttccacttctccgggatcggggtgcaggtgccggacgacgacggcgacgaggtggacggg 622 Query: 138 atggacgaggccctctgccccgtggactcgttccagcagggccccatcctggacgacgag 197 |||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 623 tacgacgaggcgatctgccccatggactcgttcagccagggccccatcctggacgacgag 682 Query: 198 atcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgat 257 ||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||| Sbjct: 683 atcaacgaggccatcgtccgcccgctcgtccacggcgccaagctccacgccgtcgtcgac 742 Query: 258 gcctgccacagcgccaccgtcctcgacctcccct 291 ||| |||||| ||||||||||||||||||||| Sbjct: 743 gccgagcacagctccaccgtcctcgacctcccct 776 Score = 174 bits (88), Expect = 2e-40 Identities = 133/148 (89%) Strand = Plus / Plus Query: 459 gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgcaccacctacggccgc 518 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || Sbjct: 941 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgcgccacctacggcagc 1000 Query: 519 ctgctcacctccatgagggccatcatgcgcgacagcggcggcaactgcaacctccaaggc 578 ||||||||| |||||||| ||||||||||||| |||||| || ||||||||| || ||| Sbjct: 1001 ctgctcaccaccatgaggagcatcatgcgcgacggcggcgtcacctgcaacctgcagggc 1060 Query: 579 cccatcggcggctccatccgcagggtcg 606 |||||||||| | ||||||||| ||||| Sbjct: 1061 cccatcggcgcccccatccgcaaggtcg 1088
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 281 bits (142), Expect = 1e-72 Identities = 241/274 (87%) Strand = Plus / Minus Query: 18 aacatccgcatggcgatgcactggctggtgcaggggtgcagctacggcgactccctggtg 77 |||||| | ||||||||| |||||||||||||||||||||||| ||| ||||| |||||| Sbjct: 15370033 aacatcaggatggcgatgaactggctggtgcaggggtgcagctccggtgactcgctggtg 15369974 Query: 78 ttccagttctccggcatgggcgcgcaggtccccgacgacgacggcgacgagctggacggc 137 ||||| |||||||| || || | |||||| || |||||||||||||||||| ||||||| Sbjct: 15369973 ttccacttctccgggatcggggtgcaggtgccggacgacgacggcgacgaggtggacggg 15369914 Query: 138 atggacgaggccctctgccccgtggactcgttccagcagggccccatcctggacgacgag 197 |||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 15369913 tacgacgaggcgatctgccccatggactcgttcagccagggccccatcctggacgacgag 15369854 Query: 198 atcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgat 257 ||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||| Sbjct: 15369853 atcaacgaggccatcgtccgcccgctcgtccacggcgccaagctccacgccgtcgtcgac 15369794 Query: 258 gcctgccacagcgccaccgtcctcgacctcccct 291 ||| |||||| ||||||||||||||||||||| Sbjct: 15369793 gccgagcacagctccaccgtcctcgacctcccct 15369760 Score = 174 bits (88), Expect = 2e-40 Identities = 133/148 (89%) Strand = Plus / Minus Query: 459 gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgcaccacctacggccgc 518 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || Sbjct: 15369512 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgcgccacctacggcagc 15369453 Query: 519 ctgctcacctccatgagggccatcatgcgcgacagcggcggcaactgcaacctccaaggc 578 ||||||||| |||||||| ||||||||||||| |||||| || ||||||||| || ||| Sbjct: 15369452 ctgctcaccaccatgaggagcatcatgcgcgacggcggcgtcacctgcaacctgcagggc 15369393 Query: 579 cccatcggcggctccatccgcagggtcg 606 |||||||||| | ||||||||| ||||| Sbjct: 15369392 cccatcggcgcccccatccgcaaggtcg 15369365 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 182 catcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagct 241 |||| |||||||||| |||||||| ||||||||| |||||| || ||||| ||||| Sbjct: 15409806 catcttggacgacgacatcaacgatgccatcgtcaagccgctcacccaaggcgtgaagct 15409747 Query: 242 gcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccctacc 294 |||||||||| |||| |||||||||||| |||| | |||||||||||||||| Sbjct: 15409746 gcacgccatcatcgacacctgccacagcggcaccatgctcgacctcccctacc 15409694 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 182 catcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagct 241 |||||| |||||||||||||||||| |||||||||| || ||||| |||||| ||||| Sbjct: 15424423 catcctcgacgacgagatcaacgagaccatcgtccggccactcgtcgccggcgtgaagct 15424364 Query: 242 gcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 291 || |||||||| || | |||||||||| |||| |||| |||||||||| Sbjct: 15424363 ccatgccatcgtggacacgtgccacagcggcaccatcctggacctcccct 15424314 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 183 atcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctg 242 ||||| |||||||||||||||||| |||||||||| || ||||| ||||| ||||| Sbjct: 15402359 atcctcgacgacgagatcaacgagaccatcgtccggcccctcgtcgccggcgcgaagctc 15402300 Query: 243 cacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 291 ||||||||||| || | |||||||||| |||| |||| |||||||||| Sbjct: 15402299 cacgccatcgtggacacgtgccacagcggcaccatcctggacctcccct 15402251 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Minus Query: 29 ggcgatgcactggctggtgcaggggtgcagctacggcgactccctggtgttccagttctc 88 |||||||| ||||||||| | ||||||||| ||||||||| |||||| |||| ||||| Sbjct: 15424576 ggcgatgcggtggctggtggaagggtgcagcgccggcgactcgctggtgctccacttctc 15424517 Query: 89 cggcatgggcgcgcaggtccccgacgacgacggcgacgagctggacggcatggacgaggc 148 |||| |||| |||| | |||| ||||||||||||| ||||||| |||||||| Sbjct: 15424516 cggccacggcgtgcagaagctggacgtcgacggcgacgaggcggacggctacgacgaggc 15424457 Query: 149 cctctgccccgtggact 165 || ||||||||||||| Sbjct: 15424456 gctgtgccccgtggact 15424440 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 39 tggctggtgcaggggtgcagctacggcgactccctggtgttccagttctccggc 92 ||||||||| |||||||| || ||||||||| ||||||||||| ||||||||| Sbjct: 15409949 tggctggtggaggggtgccgcgccggcgactcgctggtgttccacttctccggc 15409896 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 451 cgatcggcgccatgacgcacagcttcatcagagcggtggagt 492 ||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 15401998 cgatcggggcgatgacgtacagcttcatcagggcggtggagt 15401957 Score = 50.1 bits (25), Expect = 0.009 Identities = 109/137 (79%) Strand = Plus / Minus Query: 29 ggcgatgcactggctggtgcaggggtgcagctacggcgactccctggtgttccagttctc 88 |||||||| ||||||||| | |||||| | ||||||||| ||||||||||| ||||| Sbjct: 15402513 ggcgatgcggtggctggtggaagggtgcgacgccggcgactcgctggtgttccacttctc 15402454 Query: 89 cggcatgggcgcgcaggtccccgacgacgacggcgacgagctggacggcatggacgaggc 148 |||| |||| |||| | |||| ||||||||||| |||||||| ||||||| Sbjct: 15402453 cggccacggcgtgcagaagctggacgtgaacggcgacgaggtggacggctacaacgaggc 15402394 Query: 149 cctctgccccgtggact 165 |||||||||||||||| Sbjct: 15402393 gctctgccccgtggact 15402377 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 111 gacgacgacggcgacgagctggacggcatggacgaggccctctgccccgtggact 165 |||||| ||||||||||| |||||||| ||||||| |||||||| ||||||| Sbjct: 15409877 gacgacaacggcgacgaggtggacggccgagacgaggagctctgcccagtggact 15409823 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 459 gccatgacgcacagcttcatcagagcggtggag 491 ||||||||| |||||||||||| ||||||||| Sbjct: 15423436 gccatgacgtacagcttcatcaaggcggtggag 15423404 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 12301015 cgacgacgacggcgacgagc 12300996
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 281 bits (142), Expect = 1e-72 Identities = 241/274 (87%) Strand = Plus / Plus Query: 18 aacatccgcatggcgatgcactggctggtgcaggggtgcagctacggcgactccctggtg 77 |||||| | ||||||||| |||||||||||||||||||||||| ||| ||||| |||||| Sbjct: 131493 aacatcaggatggcgatgaactggctggtgcaggggtgcagctccggtgactcgctggtg 131552 Query: 78 ttccagttctccggcatgggcgcgcaggtccccgacgacgacggcgacgagctggacggc 137 ||||| |||||||| || || | |||||| || |||||||||||||||||| ||||||| Sbjct: 131553 ttccacttctccgggatcggggtgcaggtgccggacgacgacggcgacgaggtggacggg 131612 Query: 138 atggacgaggccctctgccccgtggactcgttccagcagggccccatcctggacgacgag 197 |||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 131613 tacgacgaggcgatctgccccatggactcgttcagccagggccccatcctggacgacgag 131672 Query: 198 atcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgat 257 ||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||| Sbjct: 131673 atcaacgaggccatcgtccgcccgctcgtccacggcgccaagctccacgccgtcgtcgac 131732 Query: 258 gcctgccacagcgccaccgtcctcgacctcccct 291 ||| |||||| ||||||||||||||||||||| Sbjct: 131733 gccgagcacagctccaccgtcctcgacctcccct 131766 Score = 174 bits (88), Expect = 2e-40 Identities = 133/148 (89%) Strand = Plus / Plus Query: 459 gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgcaccacctacggccgc 518 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || Sbjct: 132014 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgcgccacctacggcagc 132073 Query: 519 ctgctcacctccatgagggccatcatgcgcgacagcggcggcaactgcaacctccaaggc 578 ||||||||| |||||||| ||||||||||||| |||||| || ||||||||| || ||| Sbjct: 132074 ctgctcaccaccatgaggagcatcatgcgcgacggcggcgtcacctgcaacctgcagggc 132133 Query: 579 cccatcggcggctccatccgcagggtcg 606 |||||||||| | ||||||||| ||||| Sbjct: 132134 cccatcggcgcccccatccgcaaggtcg 132161 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Plus Query: 182 catcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagct 241 |||| |||||||||| |||||||| ||||||||| |||||| || ||||| ||||| Sbjct: 91720 catcttggacgacgacatcaacgatgccatcgtcaagccgctcacccaaggcgtgaagct 91779 Query: 242 gcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccctacc 294 |||||||||| |||| |||||||||||| |||| | |||||||||||||||| Sbjct: 91780 gcacgccatcatcgacacctgccacagcggcaccatgctcgacctcccctacc 91832 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 182 catcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagct 241 |||||| |||||||||||||||||| |||||||||| || ||||| |||||| ||||| Sbjct: 77103 catcctcgacgacgagatcaacgagaccatcgtccggccactcgtcgccggcgtgaagct 77162 Query: 242 gcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 291 || |||||||| || | |||||||||| |||| |||| |||||||||| Sbjct: 77163 ccatgccatcgtggacacgtgccacagcggcaccatcctggacctcccct 77212 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 183 atcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctg 242 ||||| |||||||||||||||||| |||||||||| || ||||| ||||| ||||| Sbjct: 99167 atcctcgacgacgagatcaacgagaccatcgtccggcccctcgtcgccggcgcgaagctc 99226 Query: 243 cacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 291 ||||||||||| || | |||||||||| |||| |||| |||||||||| Sbjct: 99227 cacgccatcgtggacacgtgccacagcggcaccatcctggacctcccct 99275 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 29 ggcgatgcactggctggtgcaggggtgcagctacggcgactccctggtgttccagttctc 88 |||||||| ||||||||| | ||||||||| ||||||||| |||||| |||| ||||| Sbjct: 76950 ggcgatgcggtggctggtggaagggtgcagcgccggcgactcgctggtgctccacttctc 77009 Query: 89 cggcatgggcgcgcaggtccccgacgacgacggcgacgagctggacggcatggacgaggc 148 |||| |||| |||| | |||| ||||||||||||| ||||||| |||||||| Sbjct: 77010 cggccacggcgtgcagaagctggacgtcgacggcgacgaggcggacggctacgacgaggc 77069 Query: 149 cctctgccccgtggact 165 || ||||||||||||| Sbjct: 77070 gctgtgccccgtggact 77086 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 39 tggctggtgcaggggtgcagctacggcgactccctggtgttccagttctccggc 92 ||||||||| |||||||| || ||||||||| ||||||||||| ||||||||| Sbjct: 91577 tggctggtggaggggtgccgcgccggcgactcgctggtgttccacttctccggc 91630 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 451 cgatcggcgccatgacgcacagcttcatcagagcggtggagt 492 ||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 99528 cgatcggggcgatgacgtacagcttcatcagggcggtggagt 99569 Score = 50.1 bits (25), Expect = 0.009 Identities = 109/137 (79%) Strand = Plus / Plus Query: 29 ggcgatgcactggctggtgcaggggtgcagctacggcgactccctggtgttccagttctc 88 |||||||| ||||||||| | |||||| | ||||||||| ||||||||||| ||||| Sbjct: 99013 ggcgatgcggtggctggtggaagggtgcgacgccggcgactcgctggtgttccacttctc 99072 Query: 89 cggcatgggcgcgcaggtccccgacgacgacggcgacgagctggacggcatggacgaggc 148 |||| |||| |||| | |||| ||||||||||| |||||||| ||||||| Sbjct: 99073 cggccacggcgtgcagaagctggacgtgaacggcgacgaggtggacggctacaacgaggc 99132 Query: 149 cctctgccccgtggact 165 |||||||||||||||| Sbjct: 99133 gctctgccccgtggact 99149 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 111 gacgacgacggcgacgagctggacggcatggacgaggccctctgccccgtggact 165 |||||| ||||||||||| |||||||| ||||||| |||||||| ||||||| Sbjct: 91649 gacgacaacggcgacgaggtggacggccgagacgaggagctctgcccagtggact 91703 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 459 gccatgacgcacagcttcatcagagcggtggag 491 ||||||||| |||||||||||| ||||||||| Sbjct: 78090 gccatgacgtacagcttcatcaaggcggtggag 78122
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 281 bits (142), Expect = 1e-72 Identities = 241/274 (87%) Strand = Plus / Minus Query: 18 aacatccgcatggcgatgcactggctggtgcaggggtgcagctacggcgactccctggtg 77 |||||| | ||||||||| |||||||||||||||||||||||| ||| ||||| |||||| Sbjct: 15364567 aacatcaggatggcgatgaactggctggtgcaggggtgcagctccggtgactcgctggtg 15364508 Query: 78 ttccagttctccggcatgggcgcgcaggtccccgacgacgacggcgacgagctggacggc 137 ||||| |||||||| || || | |||||| || |||||||||||||||||| ||||||| Sbjct: 15364507 ttccacttctccgggatcggggtgcaggtgccggacgacgacggcgacgaggtggacggg 15364448 Query: 138 atggacgaggccctctgccccgtggactcgttccagcagggccccatcctggacgacgag 197 |||||||| |||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 15364447 tacgacgaggcgatctgccccatggactcgttcagccagggccccatcctggacgacgag 15364388 Query: 198 atcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctgcacgccatcgtcgat 257 ||||||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||| Sbjct: 15364387 atcaacgaggccatcgtccgcccgctcgtccacggcgccaagctccacgccgtcgtcgac 15364328 Query: 258 gcctgccacagcgccaccgtcctcgacctcccct 291 ||| |||||| ||||||||||||||||||||| Sbjct: 15364327 gccgagcacagctccaccgtcctcgacctcccct 15364294 Score = 174 bits (88), Expect = 2e-40 Identities = 133/148 (89%) Strand = Plus / Minus Query: 459 gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgcaccacctacggccgc 518 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || Sbjct: 15364046 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgcgccacctacggcagc 15363987 Query: 519 ctgctcacctccatgagggccatcatgcgcgacagcggcggcaactgcaacctccaaggc 578 ||||||||| |||||||| ||||||||||||| |||||| || ||||||||| || ||| Sbjct: 15363986 ctgctcaccaccatgaggagcatcatgcgcgacggcggcgtcacctgcaacctgcagggc 15363927 Query: 579 cccatcggcggctccatccgcagggtcg 606 |||||||||| | ||||||||| ||||| Sbjct: 15363926 cccatcggcgcccccatccgcaaggtcg 15363899 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Minus Query: 182 catcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagct 241 |||| |||||||||| |||||||| ||||||||| |||||| || ||||| ||||| Sbjct: 15404340 catcttggacgacgacatcaacgatgccatcgtcaagccgctcacccaaggcgtgaagct 15404281 Query: 242 gcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccctacc 294 |||||||||| |||| |||||||||||| |||| | |||||||||||||||| Sbjct: 15404280 gcacgccatcatcgacacctgccacagcggcaccatgctcgacctcccctacc 15404228 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 182 catcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagct 241 |||||| |||||||||||||||||| |||||||||| || ||||| |||||| ||||| Sbjct: 15418957 catcctcgacgacgagatcaacgagaccatcgtccggccactcgtcgccggcgtgaagct 15418898 Query: 242 gcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 291 || |||||||| || | |||||||||| |||| |||| |||||||||| Sbjct: 15418897 ccatgccatcgtggacacgtgccacagcggcaccatcctggacctcccct 15418848 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 183 atcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctg 242 ||||| |||||||||||||||||| |||||||||| || ||||| ||||| ||||| Sbjct: 15396893 atcctcgacgacgagatcaacgagaccatcgtccggcccctcgtcgccggcgcgaagctc 15396834 Query: 243 cacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 291 ||||||||||| || | |||||||||| |||| |||| |||||||||| Sbjct: 15396833 cacgccatcgtggacacgtgccacagcggcaccatcctggacctcccct 15396785 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Minus Query: 29 ggcgatgcactggctggtgcaggggtgcagctacggcgactccctggtgttccagttctc 88 |||||||| ||||||||| | ||||||||| ||||||||| |||||| |||| ||||| Sbjct: 15419110 ggcgatgcggtggctggtggaagggtgcagcgccggcgactcgctggtgctccacttctc 15419051 Query: 89 cggcatgggcgcgcaggtccccgacgacgacggcgacgagctggacggcatggacgaggc 148 |||| |||| |||| | |||| ||||||||||||| ||||||| |||||||| Sbjct: 15419050 cggccacggcgtgcagaagctggacgtcgacggcgacgaggcggacggctacgacgaggc 15418991 Query: 149 cctctgccccgtggact 165 || ||||||||||||| Sbjct: 15418990 gctgtgccccgtggact 15418974 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 39 tggctggtgcaggggtgcagctacggcgactccctggtgttccagttctccggc 92 ||||||||| |||||||| || ||||||||| ||||||||||| ||||||||| Sbjct: 15404483 tggctggtggaggggtgccgcgccggcgactcgctggtgttccacttctccggc 15404430 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 451 cgatcggcgccatgacgcacagcttcatcagagcggtggagt 492 ||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 15396532 cgatcggggcgatgacgtacagcttcatcagggcggtggagt 15396491 Score = 50.1 bits (25), Expect = 0.009 Identities = 109/137 (79%) Strand = Plus / Minus Query: 29 ggcgatgcactggctggtgcaggggtgcagctacggcgactccctggtgttccagttctc 88 |||||||| ||||||||| | |||||| | ||||||||| ||||||||||| ||||| Sbjct: 15397047 ggcgatgcggtggctggtggaagggtgcgacgccggcgactcgctggtgttccacttctc 15396988 Query: 89 cggcatgggcgcgcaggtccccgacgacgacggcgacgagctggacggcatggacgaggc 148 |||| |||| |||| | |||| ||||||||||| |||||||| ||||||| Sbjct: 15396987 cggccacggcgtgcagaagctggacgtgaacggcgacgaggtggacggctacaacgaggc 15396928 Query: 149 cctctgccccgtggact 165 |||||||||||||||| Sbjct: 15396927 gctctgccccgtggact 15396911 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 111 gacgacgacggcgacgagctggacggcatggacgaggccctctgccccgtggact 165 |||||| ||||||||||| |||||||| ||||||| |||||||| ||||||| Sbjct: 15404411 gacgacaacggcgacgaggtggacggccgagacgaggagctctgcccagtggact 15404357 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 459 gccatgacgcacagcttcatcagagcggtggag 491 ||||||||| |||||||||||| ||||||||| Sbjct: 15417970 gccatgacgtacagcttcatcaaggcggtggag 15417938 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 12297778 cgacgacgacggcgacgagc 12297759
>ref|XM_470786.1| Oryza sativa (japonica cultivar-group), mRNA Length = 857 Score = 174 bits (88), Expect = 2e-40 Identities = 133/148 (89%) Strand = Plus / Plus Query: 459 gccatgacgcacagcttcatcagagcggtggagtgcgagccgcgcaccacctacggccgc 518 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| || Sbjct: 284 gccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgcgccacctacggcagc 343 Query: 519 ctgctcacctccatgagggccatcatgcgcgacagcggcggcaactgcaacctccaaggc 578 ||||||||| |||||||| ||||||||||||| |||||| || ||||||||| || ||| Sbjct: 344 ctgctcaccaccatgaggagcatcatgcgcgacggcggcgtcacctgcaacctgcagggc 403 Query: 579 cccatcggcggctccatccgcagggtcg 606 |||||||||| | ||||||||| ||||| Sbjct: 404 cccatcggcgcccccatccgcaaggtcg 431
>ref|XM_470794.1| Oryza sativa (japonica cultivar-group), mRNA Length = 909 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Plus Query: 182 catcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagct 241 |||| |||||||||| |||||||| ||||||||| |||||| || ||||| ||||| Sbjct: 369 catcttggacgacgacatcaacgatgccatcgtcaagccgctcacccaaggcgtgaagct 428 Query: 242 gcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccctacc 294 |||||||||| |||| |||||||||||| |||| | |||||||||||||||| Sbjct: 429 gcacgccatcatcgacacctgccacagcggcaccatgctcgacctcccctacc 481 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 39 tggctggtgcaggggtgcagctacggcgactccctggtgttccagttctccggc 92 ||||||||| |||||||| || ||||||||| ||||||||||| ||||||||| Sbjct: 226 tggctggtggaggggtgccgcgccggcgactcgctggtgttccacttctccggc 279 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 111 gacgacgacggcgacgagctggacggcatggacgaggccctctgccccgtggact 165 |||||| ||||||||||| |||||||| ||||||| |||||||| ||||||| Sbjct: 298 gacgacaacggcgacgaggtggacggccgagacgaggagctctgcccagtggact 352
>dbj|AK063170.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-G09, full insert sequence Length = 1347 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/113 (84%) Strand = Plus / Plus Query: 182 catcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagct 241 |||| |||||||||| |||||||| ||||||||| |||||| || ||||| ||||| Sbjct: 403 catcttggacgacgacatcaacgatgccatcgtcaagccgctcacccaaggcgtgaagct 462 Query: 242 gcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccctacc 294 |||||||||| |||| |||||||||||| |||| | |||||||||||||||| Sbjct: 463 gcacgccatcatcgacacctgccacagcggcaccatgctcgacctcccctacc 515 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 39 tggctggtgcaggggtgcagctacggcgactccctggtgttccagttctccggc 92 ||||||||| |||||||| || ||||||||| ||||||||||| ||||||||| Sbjct: 260 tggctggtggaggggtgccgcgccggcgactcgctggtgttccacttctccggc 313 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Plus Query: 111 gacgacgacggcgacgagctggacggcatggacgaggccctctgccccgtggact 165 |||||| ||||||||||| |||||||| ||||||| |||||||| ||||||| Sbjct: 332 gacgacaacggcgacgaggtggacggccgagacgaggagctctgcccagtggact 386
>ref|XM_470796.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 182 catcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagct 241 |||||| |||||||||||||||||| |||||||||| || ||||| |||||| ||||| Sbjct: 606 catcctcgacgacgagatcaacgagaccatcgtccggccactcgtcgccggcgtgaagct 665 Query: 242 gcacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 291 || |||||||| || | |||||||||| |||| |||| |||||||||| Sbjct: 666 ccatgccatcgtggacacgtgccacagcggcaccatcctggacctcccct 715 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 29 ggcgatgcactggctggtgcaggggtgcagctacggcgactccctggtgttccagttctc 88 |||||||| ||||||||| | ||||||||| ||||||||| |||||| |||| ||||| Sbjct: 453 ggcgatgcggtggctggtggaagggtgcagcgccggcgactcgctggtgctccacttctc 512 Query: 89 cggcatgggcgcgcaggtccccgacgacgacggcgacgagctggacggcatggacgaggc 148 |||| |||| |||| | |||| ||||||||||||| ||||||| |||||||| Sbjct: 513 cggccacggcgtgcagaagctggacgtcgacggcgacgaggcggacggctacgacgaggc 572 Query: 149 cctctgccccgtggact 165 || ||||||||||||| Sbjct: 573 gctgtgccccgtggact 589 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 459 gccatgacgcacagcttcatcagagcggtggag 491 ||||||||| |||||||||||| ||||||||| Sbjct: 883 gccatgacgtacagcttcatcaaggcggtggag 915
>ref|XM_470792.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1203 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Plus Query: 183 atcctggacgacgagatcaacgaggccatcgtccgcccgctcgtgcacggcgtcaagctg 242 ||||| |||||||||||||||||| |||||||||| || ||||| ||||| ||||| Sbjct: 673 atcctcgacgacgagatcaacgagaccatcgtccggcccctcgtcgccggcgcgaagctc 732 Query: 243 cacgccatcgtcgatgcctgccacagcgccaccgtcctcgacctcccct 291 ||||||||||| || | |||||||||| |||| |||| |||||||||| Sbjct: 733 cacgccatcgtggacacgtgccacagcggcaccatcctggacctcccct 781 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 451 cgatcggcgccatgacgcacagcttcatcagagcggtggagt 492 ||||||| || |||||| ||||||||||||| |||||||||| Sbjct: 956 cgatcggggcgatgacgtacagcttcatcagggcggtggagt 997 Score = 50.1 bits (25), Expect = 0.009 Identities = 109/137 (79%) Strand = Plus / Plus Query: 29 ggcgatgcactggctggtgcaggggtgcagctacggcgactccctggtgttccagttctc 88 |||||||| ||||||||| | |||||| | ||||||||| ||||||||||| ||||| Sbjct: 519 ggcgatgcggtggctggtggaagggtgcgacgccggcgactcgctggtgttccacttctc 578 Query: 89 cggcatgggcgcgcaggtccccgacgacgacggcgacgagctggacggcatggacgaggc 148 |||| |||| |||| | |||| ||||||||||| |||||||| ||||||| Sbjct: 579 cggccacggcgtgcagaagctggacgtgaacggcgacgaggtggacggctacaacgaggc 638 Query: 149 cctctgccccgtggact 165 |||||||||||||||| Sbjct: 639 gctctgccccgtggact 655
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 498 ccgcgcaccacctacggccgcctgctc 524 ||||||||||| ||||||||||||||| Sbjct: 5654417 ccgcgcaccacgtacggccgcctgctc 5654443 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 cgacgacgacggcgacgagctgga 133 |||||||||||||||||| ||||| Sbjct: 3794353 cgacgacgacggcgacgacctgga 3794376
>ref|XM_468337.1| Oryza sativa (japonica cultivar-group), mRNA Length = 747 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 116 cgacggcgacgagctggacggc 137 |||||||||||||||||||||| Sbjct: 231 cgacggcgacgagctggacggc 210
>ref|XM_877373.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor (Alpha-2-M), transcript variant 6 (LOC513856), mRNA Length = 4896 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 gccaggccgtgctcatcagtgg 400 |||||||||||||||||||||| Sbjct: 1512 gccaggccgtgctcatcagtgg 1491
>ref|XM_877327.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor (Alpha-2-M), transcript variant 5 (LOC513856), mRNA Length = 4848 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 gccaggccgtgctcatcagtgg 400 |||||||||||||||||||||| Sbjct: 1512 gccaggccgtgctcatcagtgg 1491
>ref|XM_877276.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor (Alpha-2-M), transcript variant 4 (LOC513856), mRNA Length = 4923 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 gccaggccgtgctcatcagtgg 400 |||||||||||||||||||||| Sbjct: 1512 gccaggccgtgctcatcagtgg 1491
>ref|XM_877233.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor (Alpha-2-M), transcript variant 3 (LOC513856), mRNA Length = 2803 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 gccaggccgtgctcatcagtgg 400 |||||||||||||||||||||| Sbjct: 1512 gccaggccgtgctcatcagtgg 1491
>ref|XM_865861.1| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor (Alpha-2-M), transcript variant 2 (LOC513856), mRNA Length = 4911 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 gccaggccgtgctcatcagtgg 400 |||||||||||||||||||||| Sbjct: 1512 gccaggccgtgctcatcagtgg 1491
>ref|XM_591612.2| PREDICTED: Bos taurus similar to Alpha-2-macroglobulin precursor (Alpha-2-M), transcript variant 1 (LOC513856), mRNA Length = 5019 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 gccaggccgtgctcatcagtgg 400 |||||||||||||||||||||| Sbjct: 1512 gccaggccgtgctcatcagtgg 1491
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 cgacggcgacgagctggacggc 137 |||||||||||||||||||||| Sbjct: 34707386 cgacggcgacgagctggacggc 34707407 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 tccccgacgacgacggcgacga 127 |||||||||||||||||||||| Sbjct: 18005189 tccccgacgacgacggcgacga 18005210 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 10093990 cgacgacgacggcgacgagc 10093971
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0016F11 Length = 134907 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 cgacggcgacgagctggacggc 137 |||||||||||||||||||||| Sbjct: 25234 cgacggcgacgagctggacggc 25255
>dbj|AP004081.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E04 Length = 94096 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 116 cgacggcgacgagctggacggc 137 |||||||||||||||||||||| Sbjct: 64337 cgacggcgacgagctggacggc 64358
>dbj|AP005285.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F04 Length = 139563 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 tccccgacgacgacggcgacga 127 |||||||||||||||||||||| Sbjct: 66783 tccccgacgacgacggcgacga 66804
>dbj|AK111446.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-B03, full insert sequence Length = 1587 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 116 cgacggcgacgagctggacggc 137 |||||||||||||||||||||| Sbjct: 732 cgacggcgacgagctggacggc 711
>dbj|AK068973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001O14, full insert sequence Length = 3801 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 tccccgacgacgacggcgacga 127 |||||||||||||||||||||| Sbjct: 270 tccccgacgacgacggcgacga 291
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 325 ggaggtggagggatgagcgcc 345 ||||||||||||||||||||| Sbjct: 75813 ggaggtggagggatgagcgcc 75833
>ref|XM_573691.1| PREDICTED: Rattus norvegicus similar to myozenin 1 (LOC498440), mRNA Length = 1394 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 361 gcaagggcaccagcggaggccaggc 385 ||||||||| ||||||||||||||| Sbjct: 560 gcaagggcagcagcggaggccaggc 584
>ref|XM_464933.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2057 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 79 cgacgacgacggcgacgagc 98
>ref|NM_190381.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2376 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ctgcacgccatcgtcgatgc 259 |||||||||||||||||||| Sbjct: 1738 ctgcacgccatcgtcgatgc 1719
>gb|AY022423.1| Oryza sativa microsatellite MRG4748 containing (ACG)X12, closest to marker R758, genomic sequence Length = 236 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 126 cgacgacgacggcgacgagc 145
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 141912 cgacgacgacggcgacgagc 141893
>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene cluster, complete sequence Length = 84868 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ttccagttctccggcatggg 97 |||||||||||||||||||| Sbjct: 35088 ttccagttctccggcatggg 35107
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 493 gcgagccgcgcaccacctacggccgcctgctc 524 ||||||||||| |||||| |||| |||||||| Sbjct: 4749076 gcgagccgcgcgccaccttcggctgcctgctc 4749107
>ref|NM_001032932.1| Macaca mulatta aryl-hydrocarbon interacting protein-like 1 (AIPL1), mRNA Length = 1179 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 cctgctcacctccatgaggg 537 |||||||||||||||||||| Sbjct: 222 cctgctcacctccatgaggg 241
>ref|XM_988711.1| PREDICTED: Mus musculus zinc finger protein 167 (Zfp167), mRNA Length = 2400 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 gaggccaggccgtgctcatc 395 |||||||||||||||||||| Sbjct: 713 gaggccaggccgtgctcatc 694
>ref|XM_539234.2| PREDICTED: Canis familiaris similar to Wolfram syndrome 1 (LOC482113), mRNA Length = 2667 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 111 gacgacgacggcgacgagctggacggca 138 |||||||||| ||||||||||| ||||| Sbjct: 799 gacgacgacgacgacgagctggccggca 826
>gb|AC125374.4| Mus musculus BAC clone RP23-438P19 from chromosome 9, complete sequence Length = 175440 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gaggccaggccgtgctcatc 395 |||||||||||||||||||| Sbjct: 64334 gaggccaggccgtgctcatc 64353
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ccggcatgggcgcgcaggtc 107 |||||||||||||||||||| Sbjct: 237069 ccggcatgggcgcgcaggtc 237050
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcatggcgatgcactggctg 44 |||||||||||||||||||| Sbjct: 2523548 gcatggcgatgcactggctg 2523529
>gb|AE005847.1| Caulobacter crescentus CB15 section 173 of 359 of the complete genome Length = 10886 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 236 caagctgcacgccatcgtcgatgc 259 ||||||||||| |||||||||||| Sbjct: 6056 caagctgcacgacatcgtcgatgc 6033
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 505 ccacctacggccgcctgctcacctccat 532 |||||||||||||||||| |||| |||| Sbjct: 3642444 ccacctacggccgcctgcgcaccgccat 3642471
>gb|BC042569.1| Mus musculus zinc finger protein 167, mRNA (cDNA clone IMAGE:3994925), with apparent retained intron Length = 3973 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 gaggccaggccgtgctcatc 395 |||||||||||||||||||| Sbjct: 1367 gaggccaggccgtgctcatc 1348
>gb|AF296414.1|AF296414 Papio cynocephalus aryl-hydrocarbon interacting protein-like 1 (Aipl1) mRNA, complete cds Length = 1119 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 cctgctcacctccatgaggg 537 |||||||||||||||||||| Sbjct: 222 cctgctcacctccatgaggg 241
>gb|AF296411.1|AF296411 Macaca mulatta aryl-hydrocarbon interacting protein-like 1 (Aipl1) mRNA, complete cds Length = 1179 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 cctgctcacctccatgaggg 537 |||||||||||||||||||| Sbjct: 222 cctgctcacctccatgaggg 241
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cccgacgacgacggcgacga 127 |||||||||||||||||||| Sbjct: 129745 cccgacgacgacggcgacga 129764
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 27266944 cgacgacgacggcgacgagc 27266925
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ctgcacgccatcgtcgatgc 259 |||||||||||||||||||| Sbjct: 35155167 ctgcacgccatcgtcgatgc 35155148
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ctgcacgccatcgtcgatgc 259 |||||||||||||||||||| Sbjct: 34251 ctgcacgccatcgtcgatgc 34232
>gb|AY189899.1| Pseudorabies virus strain Ea UL15 (UL15), UL17 (UL17), UL16 (UL16), and UL14 (UL14) genes, complete cds; and UL13 (UL13) gene, partial cds Length = 6671 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 ccgacgacgacggcgacgag 128 |||||||||||||||||||| Sbjct: 4985 ccgacgacgacggcgacgag 4966
>ref|XM_220206.3| PREDICTED: Rattus norvegicus kringle containing transmembrane protein 2 (predicted) (Kremen2_predicted), mRNA Length = 1284 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 399 ggcagcagcaacgggaagag 418 |||||||||||||||||||| Sbjct: 53 ggcagcagcaacgggaagag 34
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 70548 cgacgacgacggcgacgagc 70529
>gb|AE005078.1| Halobacterium sp. NRC-1 section 109 of 170 of the complete genome Length = 11449 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 cccgacgacgacggcgacga 127 |||||||||||||||||||| Sbjct: 4647 cccgacgacgacggcgacga 4666
>dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0413A11 Length = 188440 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 168683 cgacgacgacggcgacgagc 168664
>dbj|AP004770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017G06 Length = 150628 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 41684 cgacgacgacggcgacgagc 41665
>ref|XM_316513.2| Anopheles gambiae str. PEST ENSANGP00000013494 (ENSANGG00000011005), partial mRNA Length = 2530 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 cgacgacgacggcgacgagctgga 133 ||||||||||| |||||||||||| Sbjct: 105 cgacgacgacgacgacgagctgga 128
>dbj|AK108674.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-H12, full insert sequence Length = 1783 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 326 cgacgacgacggcgacgagc 345
>dbj|AK071664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106B19, full insert sequence Length = 2056 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 78 cgacgacgacggcgacgagc 97
>dbj|AK071170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080J08, full insert sequence Length = 1468 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 cgacgacgacggcgacgagc 129 |||||||||||||||||||| Sbjct: 683 cgacgacgacggcgacgagc 702
>gb|AY105507.1| Zea mays PCO119884 mRNA sequence Length = 1145 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 110 cgacgacgacggcgacgagctggacggc 137 |||||||||||||| ||||| ||||||| Sbjct: 119 cgacgacgacggcggcgagcaggacggc 92
>emb|AL160471.5|CNS01RH4 Human chromosome 14 DNA sequence BAC R-304L20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 193559 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 ctggaggtggagggatgagc 342 |||||||||||||||||||| Sbjct: 177719 ctggaggtggagggatgagc 177738
>gb|AC165888.18| Mus musculus chromosome 3, clone RP24-352B14, complete sequence Length = 181505 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 gtgctcatcagtggcagcag 406 |||||||||||||||||||| Sbjct: 116162 gtgctcatcagtggcagcag 116143
>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1, ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10, ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and ORF19 Length = 86080 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ttccagttctccggcatggg 97 |||||||||||||||||||| Sbjct: 35006 ttccagttctccggcatggg 35025
>emb|AL805958.8| Mouse DNA sequence from clone RP23-179F9 on chromosome 2, complete sequence Length = 198627 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 gcaccgtgtccaagcagacc 317 |||||||||||||||||||| Sbjct: 55078 gcaccgtgtccaagcagacc 55097 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,571,582 Number of Sequences: 3902068 Number of extensions: 4571582 Number of successful extensions: 106965 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105368 Number of HSP's gapped (non-prelim): 1588 length of query: 612 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 589 effective length of database: 17,143,297,704 effective search space: 10097402347656 effective search space used: 10097402347656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
