>BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 693

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
 Frame = +3

Query: 228 LEEIRQKRAAERMQQQQTPAATASH-GDPHGNQRAAAELLARVXXXXXXXXXXXXXXXML 404
           +EE+   +     +  QT    ++   + H N+    +LL ++                 
Sbjct: 270 IEELENYKQLNEKELAQTRLEISNLLSEKHSNEEEREDLLHQIEKLKASNTDLTLTNESF 329

Query: 405 MSKFAEKEVEKDSLVSRLNDLEKNVVPSLKKSLNDISLEKD 527
           +SKF E   EKD+   +++   +  + SLK    +++LEKD
Sbjct: 330 LSKFQELAKEKDTFQEKISSDFEKTLESLK--AQNLALEKD 368

>XAG2_XENLA (P55869) Probable secreted protein XAG-2 precursor (Secreted|
           protein np77)
          Length = 185

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 19/61 (31%), Positives = 24/61 (39%)
 Frame = -2

Query: 283 GVCCCCILSAALFCRISSSCHTRNRDRSLGHQKLTGEARRGSEPPPASRKGKKVKSGGWR 104
           G+   C++   L C +      R   R  G     G A+  SEP P   KG K    GW 
Sbjct: 4   GLSLACLV---LLCSVLGEAALRKPKRQAGATDTNGAAK--SEPAPVKTKGLKTLDRGWG 58

Query: 103 E 101
           E
Sbjct: 59  E 59

>TWST1_PONPY (Q8MIB9) Twist-related protein 1|
          Length = 203

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -2

Query: 157 EPPPASRKGKKVKSGGWREAYGAAAPGG 74
           +PP   R G+K +S   R A G A PGG
Sbjct: 28  QPPSGKRGGRKRRSSSRRSAGGGAGPGG 55

>CLPB_CHLMU (Q9PKS5) Chaperone clpB|
          Length = 867

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 12/31 (38%), Positives = 23/31 (74%)
 Frame = +3

Query: 411 KFAEKEVEKDSLVSRLNDLEKNVVPSLKKSL 503
           KFAE+E E+ +  +R+ +L  +++PSL+K +
Sbjct: 482 KFAEEEAERTADYNRVAELRYSLIPSLEKEI 512

>Y1882_ARCFU (O28397) Hypothetical protein AF1882 precursor|
          Length = 198

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
 Frame = -3

Query: 522 SPVRCHLETSSTRALHFSR-GHLIG*PGNPFQLPSQQTWTSAF-----GFPSPIP 376
           SPV+ HL  S  R+L F R GH+        Q+  Q T+ S F      +PSP+P
Sbjct: 103 SPVQRHLSISIFRSLPFLRMGHMT-------QMAGQATFQSPFSGASLSYPSPLP 150

>TPA_HUMAN (P00750) Tissue-type plasminogen activator precursor (EC 3.4.21.68)|
           (tPA) (t-PA) (t-plasminogen activator) (Alteplase)
           (Reteplase) [Contains: Tissue-type plasminogen activator
           chain A; Tissue-type plasminogen activator chain B]
          Length = 562

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -2

Query: 298 DAVAAGVCCCCILSAALFCRISSSCHTRNRDRSLGHQ 188
           DA+  G+CC  +L  A+F   S   H R R  +  +Q
Sbjct: 2   DAMKRGLCCVLLLCGAVFVSPSQEIHARFRRGARSYQ 38

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 23/60 (38%), Positives = 27/60 (45%)
 Frame = +1

Query: 10  PRILPXSRPGRSIARRDGVSPRLQGPPHRTPPSTPRF*LSFLFWRREAAQIRASLRPSAS 189
           PR    SR  R  + R   SPR + PP R PP  PR        RR  + +R   R SAS
Sbjct: 299 PRRRHRSRSRRRPSPRRRPSPRRRTPPRRMPP-PPRH-------RRSRSPVRRRRRSSAS 350


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,351,275
Number of Sequences: 219361
Number of extensions: 1311518
Number of successful extensions: 5198
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5175
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4200495993
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)