ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal30c19 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009632.1| Triticum aestivum clone wre1n.pk174.a10:fis, full insert mRNA sequence Length = 913 Score = 975 bits (492), Expect = 0.0 Identities = 570/596 (95%) Strand = Plus / Plus Query: 2 gcggtgttcgtgtccggcgggggctccaacttccggtcgatccacggggccgccctgggt 61 ||||||||||| || ||||||||||| ||||||||||||||||||| ||||| |||||| Sbjct: 16 gcggtgttcgtctcaggcgggggctcgaacttccggtcgatccacgaggccgttctgggt 75 Query: 62 gggaaggtgaacggggatgtggttgcgctcgtcaccgataagccaggctgcggtggcgcc 121 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76 gggaaggtgaacggggatgttgttgcgctcgtcaccgataagccaggctgcggtggcgcg 135 Query: 122 gagtatgcaaggtgcaatggcattcccgtggtcgtgtttcccaagtcgaaatccgcacca 181 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || Sbjct: 136 gagtatgcaaggtgcaatggcatgcccgtggtcgtgtttcccaagtcgaaatcggcgccg 195 Query: 182 gagggggtctccacagatgaacttctgaatgctctgagggatctgaaggtagacttcatt 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 196 gagggggtctccacagatgaacttctgaatgttctgagggatctgaaggtagactttatt 255 Query: 242 ctacttgctggttacttgaagctcatacctggtgagctagttcaggcatttcccagatcc 301 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct: 256 ctacttgctggttacttgaagctcatacctggtgagctagttaagtcatttcccagatcc 315 Query: 302 atgctgaatatacacccttcactgctccctgcatttggaggcaagggttattatggttta 361 |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 316 atgctgaatatacatccttcactgctcccggcatttggaggcaagggttattatggtttg 375 Query: 362 aaagtgcataaagcagtcattgcatctggagccagatactcaggaccaactgtgcacttt 421 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 aaagtgcataaagcagttattgcatctggagccagatactcaggaccaactgtgcacttt 435 Query: 422 gtggatgagcagttcgacacagggaaaaccttagcccaaagagttgttcctgtgttagcc 481 |||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| Sbjct: 436 gtggatgagcagttcgacacagggaaaaccttggcccaaagagttgtgccagtgttagcc 495 Query: 482 aatgatactccagagcaattggctgcaagggttcttcatgaggagaaccaagtttacgtt 541 |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct: 496 aatgatactccagagcaattggctgcaagggttcttcacgaggagcaccaagtttacgtt 555 Query: 542 gaggcagttgctgccttgtgcgaggatcgaattgtgtggcgagacgatggtgtccc 597 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 gaggcagttgctgccttgtgtgaggatcgaattgtgtggcgagacgatggtgtccc 611
>ref|XM_483193.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1447 Score = 462 bits (233), Expect = e-127 Identities = 503/593 (84%) Strand = Plus / Plus Query: 2 gcggtgttcgtgtccggcgggggctccaacttccggtcgatccacggggccgccctgggt 61 ||||||||||| ||||| ||||| |||||||||||| ||||||||| ||||| |||||| Sbjct: 359 gcggtgttcgtttccggtgggggatccaacttccgggcgatccacgacgccgctctgggt 418 Query: 62 gggaaggtgaacggggatgtggttgcgctcgtcaccgataagccaggctgcggtggcgcc 121 ||| ||||||| || |||||||||||| | || |||||||| |||||||| || || || Sbjct: 419 ggggaggtgaatggtgatgtggttgcgttggttaccgataaaccaggctgtggaggagcg 478 Query: 122 gagtatgcaaggtgcaatggcattcccgtggtcgtgtttcccaagtcgaaatccgcacca 181 ||| |||| ||| | ||||| || || ||||| ||||| || |||||||| || || ||| Sbjct: 479 gagcatgcgaggggtaatgggataccggtggttgtgttcccgaagtcgaagtctgctcca 538 Query: 182 gagggggtctccacagatgaacttctgaatgctctgagggatctgaaggtagacttcatt 241 |||||||| || | ||||| | |||||||||||||||| || | ||||||||||||| Sbjct: 539 gagggggtttctattgatgagttgttgaatgctctgagggaactcagggtagacttcatt 598 Query: 242 ctacttgctggttacttgaagctcatacctggtgagctagttcaggcatttcccagatcc 301 ||||||||||||||| |||| || ||||||| |||||||||||||| || ||| | |||| Sbjct: 599 ctacttgctggttacctgaaacttatacctgttgagctagttcaggaatatccaaaatcc 658 Query: 302 atgctgaatatacacccttcactgctccctgcatttggaggcaagggttattatggttta 361 || ||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 659 attttgaatattcacccttcactactcccagcatttggaggcaaaggttattatggtttg 718 Query: 362 aaagtgcataaagcagtcattgcatctggagccagatactcaggaccaactgtgcacttt 421 || ||||||||||||||||| ||||| || ||||| || || || ||||||||||||||| Sbjct: 719 aaggtgcataaagcagtcatcgcatcaggggccaggtattcgggtccaactgtgcacttt 778 Query: 422 gtggatgagcagttcgacacagggaaaaccttagcccaaagagttgttcctgtgttagcc 481 ||||||||||| | |||||||| | || |||||||||| ||||| |||||| ||||| Sbjct: 779 gtggatgagcactatgacacaggaaggactctagcccaaagggttgtacctgtgctagcc 838 Query: 482 aatgatactccagagcaattggctgcaagggttcttcatgaggagaaccaagtttacgtt 541 ||||||||||||||||||||||||||||| || ||||||||||| | || ||||| ||| Sbjct: 839 aatgatactccagagcaattggctgcaagagtccttcatgaggaacatcaggtttatgtt 898 Query: 542 gaggcagttgctgccttgtgcgaggatcgaattgtgtggcgagacgatggtgt 594 ||||||||||||||| | || || || |||||||||||| |||| |||||||| Sbjct: 899 gaggcagttgctgccctatgtgatgaccgaattgtgtggagagaagatggtgt 951
>dbj|AK102314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090F02, full insert sequence Length = 1446 Score = 462 bits (233), Expect = e-127 Identities = 503/593 (84%) Strand = Plus / Plus Query: 2 gcggtgttcgtgtccggcgggggctccaacttccggtcgatccacggggccgccctgggt 61 ||||||||||| ||||| ||||| |||||||||||| ||||||||| ||||| |||||| Sbjct: 358 gcggtgttcgtttccggtgggggatccaacttccgggcgatccacgacgccgctctgggt 417 Query: 62 gggaaggtgaacggggatgtggttgcgctcgtcaccgataagccaggctgcggtggcgcc 121 ||| ||||||| || |||||||||||| | || |||||||| |||||||| || || || Sbjct: 418 ggggaggtgaatggtgatgtggttgcgttggttaccgataaaccaggctgtggaggagcg 477 Query: 122 gagtatgcaaggtgcaatggcattcccgtggtcgtgtttcccaagtcgaaatccgcacca 181 ||| |||| ||| | ||||| || || ||||| ||||| || |||||||| || || ||| Sbjct: 478 gagcatgcgaggggtaatgggataccggtggttgtgttcccgaagtcgaagtctgctcca 537 Query: 182 gagggggtctccacagatgaacttctgaatgctctgagggatctgaaggtagacttcatt 241 |||||||| || | ||||| | |||||||||||||||| || | ||||||||||||| Sbjct: 538 gagggggtttctattgatgagttgttgaatgctctgagggaactcagggtagacttcatt 597 Query: 242 ctacttgctggttacttgaagctcatacctggtgagctagttcaggcatttcccagatcc 301 ||||||||||||||| |||| || ||||||| |||||||||||||| || ||| | |||| Sbjct: 598 ctacttgctggttacctgaaacttatacctgttgagctagttcaggaatatccaaaatcc 657 Query: 302 atgctgaatatacacccttcactgctccctgcatttggaggcaagggttattatggttta 361 || ||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| Sbjct: 658 attttgaatattcacccttcactactcccagcatttggaggcaaaggttattatggtttg 717 Query: 362 aaagtgcataaagcagtcattgcatctggagccagatactcaggaccaactgtgcacttt 421 || ||||||||||||||||| ||||| || ||||| || || || ||||||||||||||| Sbjct: 718 aaggtgcataaagcagtcatcgcatcaggggccaggtattcgggtccaactgtgcacttt 777 Query: 422 gtggatgagcagttcgacacagggaaaaccttagcccaaagagttgttcctgtgttagcc 481 ||||||||||| | |||||||| | || |||||||||| ||||| |||||| ||||| Sbjct: 778 gtggatgagcactatgacacaggaaggactctagcccaaagggttgtacctgtgctagcc 837 Query: 482 aatgatactccagagcaattggctgcaagggttcttcatgaggagaaccaagtttacgtt 541 ||||||||||||||||||||||||||||| || ||||||||||| | || ||||| ||| Sbjct: 838 aatgatactccagagcaattggctgcaagagtccttcatgaggaacatcaggtttatgtt 897 Query: 542 gaggcagttgctgccttgtgcgaggatcgaattgtgtggcgagacgatggtgt 594 ||||||||||||||| | || || || |||||||||||| |||| |||||||| Sbjct: 898 gaggcagttgctgccctatgtgatgaccgaattgtgtggagagaagatggtgt 950
>ref|XM_476249.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 717 Score = 448 bits (226), Expect = e-122 Identities = 502/594 (84%) Strand = Plus / Plus Query: 4 ggtgttcgtgtccggcgggggctccaacttccggtcgatccacggggccgccctgggtgg 63 ||||||||||||||| ||||| |||||||||||| ||||||||| ||||| |||||||| Sbjct: 84 ggtgttcgtgtccggtgggggatccaacttccgggcgatccacgatgccgctctgggtgg 143 Query: 64 gaaggtgaacggggatgtggttgcgctcgtcaccgataagccaggctgcggtggcgccga 123 | | ||||| || | |||||||||| | || |||||||| |||||||| || || || || Sbjct: 144 ggacgtgaatggcgttgtggttgcgttggttaccgataaaccaggctgtggaggagcaga 203 Query: 124 gtatgcaaggtgcaatggcattcccgtggtcgtgtttcccaagtcgaaatccgcaccaga 183 | |||| ||| | |||||||| || || || ||||| || |||| ||| || || ||||| Sbjct: 204 gcatgcgaggggtaatggcataccggtcgttgtgttccctaagttgaagtctgctccaga 263 Query: 184 gggggtctccacagatgaacttctgaatgctctgagggatctgaaggtagacttcattct 243 |||||| || || ||||| || |||||| ||||||||| || | ||||||||||||||| Sbjct: 264 gggggtatctactgatgagctgttgaatggtctgagggaactcagggtagacttcattct 323 Query: 244 acttgctggttacttgaagctcatacctggtgagctagttcaggcatttcccagatccat 303 ||||||||| ||| ||||||| ||||| | ||||||||||||||||| ||| | |||||| Sbjct: 324 acttgctggctacctgaagcttataccggttgagctagttcaggcatatccaaaatccat 383 Query: 304 gctgaatatacacccttcactgctccctgcatttggaggcaagggttattatggtttaaa 363 ||||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| || Sbjct: 384 tttgaatattcacccttcactactcccggcatttggaggcaaaggttattatggtttgaa 443 Query: 364 agtgcataaagcagtcattgcatctggagccagatactcaggaccaactgtgcactttgt 423 ||||||||||||||||| ||||| |||||||| ||||| || ||||||||||||||||| Sbjct: 444 ggtgcataaagcagtcatcgcatcaggagccaggtactcgggtccaactgtgcactttgt 503 Query: 424 ggatgagcagttcgacacagggaaaaccttagcccaaagagttgttcctgtgttagccaa 483 ||||||||| | |||||||| | || |||||||||| ||||| |||||| |||||| Sbjct: 504 ggatgagcactatgacacaggaaggactctagcccaaagggttgtacctgtgcaagccaa 563 Query: 484 tgatactccagagcaattggctgcaagggttcttcatgaggagaaccaagtttacgttga 543 |||||||||||||||||||||| |||| || ||||||||||| | || ||||| ||||| Sbjct: 564 tgatactccagagcaattggctacaagagtccttcatgaggaacatcaggtttatgttga 623 Query: 544 ggcagttgctgccttgtgcgaggatcgaattgtgtggcgagacgatggtgtccc 597 ||||||| ||||| | || ||||| |||||||||||| |||| |||||| |||| Sbjct: 624 ggcagttactgccctatgtgaggaccgaattgtgtggagagaagatggtatccc 677
>gb|AC115634.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1653_D06, complete sequence Length = 71193 Score = 192 bits (97), Expect = 9e-46 Identities = 154/173 (89%) Strand = Plus / Plus Query: 229 ggtagacttcattctacttgctggttacttgaagctcatacctggtgagctagttcaggc 288 |||||||||||||||||||||||| ||| ||||||| ||||| | ||||||||||||||| Sbjct: 31842 ggtagacttcattctacttgctggctacctgaagcttataccggttgagctagttcaggc 31901 Query: 289 atttcccagatccatgctgaatatacacccttcactgctccctgcatttggaggcaaggg 348 || ||| | |||||| ||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 31902 atatccaaaatccattttgaatattcacccttcactactcccggcatttggaggcaaagg 31961 Query: 349 ttattatggtttaaaagtgcataaagcagtcattgcatctggagccagatact 401 |||||||||||| || ||||||||||||||||| ||||| |||||||| |||| Sbjct: 31962 ttattatggtttgaaggtgcataaagcagtcatcgcatcaggagccaggtact 32014 Score = 117 bits (59), Expect = 4e-23 Identities = 110/127 (86%) Strand = Plus / Plus Query: 398 tactcaggaccaactgtgcactttgtggatgagcagttcgacacagggaaaaccttagcc 457 ||||| || |||||||||||||||||||||||||| | |||||||| | || ||||| Sbjct: 32220 tactcgggtccaactgtgcactttgtggatgagcactatgacacaggaaggactctagcc 32279 Query: 458 caaagagttgttcctgtgttagccaatgatactccagagcaattggctgcaagggttctt 517 ||||| ||||| |||||| |||||||||||||||||||||||||||| |||| || ||| Sbjct: 32280 caaagggttgtacctgtgcaagccaatgatactccagagcaattggctacaagagtcctt 32339 Query: 518 catgagg 524 ||||||| Sbjct: 32340 catgagg 32346 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 4 ggtgttcgtgtccggcgggggctccaacttccggtcgatccacggggccgccctgggtgg 63 ||||||||||||||| ||||| |||||||||||| ||||||||| ||||| |||||||| Sbjct: 30889 ggtgttcgtgtccggtgggggatccaacttccgggcgatccacgatgccgctctgggtgg 30948 Query: 64 gaaggtgaacggggatgtggttgcgctcgtcaccgataagccagg 108 | | ||||| || | |||||||||| | || |||||||| ||||| Sbjct: 30949 ggacgtgaatggcgttgtggttgcgttggttaccgataaaccagg 30993 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 533 gtttacgttgaggcagttgctgccttgtgcgaggatcgaattgtgtggcgagacgatggt 592 ||||| |||||||||||| ||||| | || ||||| |||||||||||| |||| |||||| Sbjct: 32470 gtttatgttgaggcagttactgccctatgtgaggaccgaattgtgtggagagaagatggt 32529 Query: 593 gtccc 597 |||| Sbjct: 32530 atccc 32534
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 192 bits (97), Expect = 9e-46 Identities = 154/173 (89%) Strand = Plus / Plus Query: 229 ggtagacttcattctacttgctggttacttgaagctcatacctggtgagctagttcaggc 288 |||||||||||||||||||||||| ||| ||||||| ||||| | ||||||||||||||| Sbjct: 10814910 ggtagacttcattctacttgctggctacctgaagcttataccggttgagctagttcaggc 10814969 Query: 289 atttcccagatccatgctgaatatacacccttcactgctccctgcatttggaggcaaggg 348 || ||| | |||||| ||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 10814970 atatccaaaatccattttgaatattcacccttcactactcccggcatttggaggcaaagg 10815029 Query: 349 ttattatggtttaaaagtgcataaagcagtcattgcatctggagccagatact 401 |||||||||||| || ||||||||||||||||| ||||| |||||||| |||| Sbjct: 10815030 ttattatggtttgaaggtgcataaagcagtcatcgcatcaggagccaggtact 10815082 Score = 117 bits (59), Expect = 4e-23 Identities = 110/127 (86%) Strand = Plus / Plus Query: 398 tactcaggaccaactgtgcactttgtggatgagcagttcgacacagggaaaaccttagcc 457 ||||| || |||||||||||||||||||||||||| | |||||||| | || ||||| Sbjct: 10815288 tactcgggtccaactgtgcactttgtggatgagcactatgacacaggaaggactctagcc 10815347 Query: 458 caaagagttgttcctgtgttagccaatgatactccagagcaattggctgcaagggttctt 517 ||||| ||||| |||||| |||||||||||||||||||||||||||| |||| || ||| Sbjct: 10815348 caaagggttgtacctgtgcaagccaatgatactccagagcaattggctacaagagtcctt 10815407 Query: 518 catgagg 524 ||||||| Sbjct: 10815408 catgagg 10815414 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 4 ggtgttcgtgtccggcgggggctccaacttccggtcgatccacggggccgccctgggtgg 63 ||||||||||||||| ||||| |||||||||||| ||||||||| ||||| |||||||| Sbjct: 10813957 ggtgttcgtgtccggtgggggatccaacttccgggcgatccacgatgccgctctgggtgg 10814016 Query: 64 gaaggtgaacggggatgtggttgcgctcgtcaccgataagccagg 108 | | ||||| || | |||||||||| | || |||||||| ||||| Sbjct: 10814017 ggacgtgaatggcgttgtggttgcgttggttaccgataaaccagg 10814061 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 533 gtttacgttgaggcagttgctgccttgtgcgaggatcgaattgtgtggcgagacgatggt 592 ||||| |||||||||||| ||||| | || ||||| |||||||||||| |||| |||||| Sbjct: 10815538 gtttatgttgaggcagttactgccctatgtgaggaccgaattgtgtggagagaagatggt 10815597 Query: 593 gtccc 597 |||| Sbjct: 10815598 atccc 10815602
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 184 bits (93), Expect = 2e-43 Identities = 153/173 (88%) Strand = Plus / Plus Query: 229 ggtagacttcattctacttgctggttacttgaagctcatacctggtgagctagttcaggc 288 |||||||||||||||||||||||||||| |||| || ||||||| |||||||||||||| Sbjct: 24725670 ggtagacttcattctacttgctggttacctgaaacttatacctgttgagctagttcagga 24725729 Query: 289 atttcccagatccatgctgaatatacacccttcactgctccctgcatttggaggcaaggg 348 || ||| | |||||| ||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 24725730 atatccaaaatccattttgaatattcacccttcactactcccagcatttggaggcaaagg 24725789 Query: 349 ttattatggtttaaaagtgcataaagcagtcattgcatctggagccagatact 401 |||||||||||| || ||||||||||||||||| ||||| || ||||| |||| Sbjct: 24725790 ttattatggtttgaaggtgcataaagcagtcatcgcatcaggggccaggtact 24725842 Score = 153 bits (77), Expect = 8e-34 Identities = 131/149 (87%) Strand = Plus / Plus Query: 229 ggtagacttcattctacttgctggttacttgaagctcatacctggtgagctagttcaggc 288 ||||||||||||| |||||||||||||| |||| || ||||| | |||||||||||||| Sbjct: 24742101 ggtagacttcattatacttgctggttacgtgaaacttataccggttgagctagttcagga 24742160 Query: 289 atttcccagatccatgctgaatatacacccttcactgctccctgcatttggaggcaaggg 348 || ||| | |||||| ||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 24742161 atatccaaaatccattttgaatattcacccttcactactcccagcatttggaggcaaagg 24742220 Query: 349 ttattatggtttaaaagtgcataaagcag 377 |||||||||||| || ||||||||||||| Sbjct: 24742221 ttattatggtttgaaggtgcataaagcag 24742249 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 407 ccaactgtgcactttgtggatgagcagttcgacacagggaaaaccttagcccaaagagtt 466 |||||||||||||||||||||||||| | |||||||| | || |||||||||| ||| Sbjct: 24726056 ccaactgtgcactttgtggatgagcactatgacacaggaaggactctagcccaaagggtt 24726115 Query: 467 gttcctgtgttagccaatgatactccagagcaattggctgcaagggttcttcatgagg 524 || |||||| |||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 24726116 gtacctgtgctagccaatgatactccagagcaattggctgcaagagtccttcatgagg 24726173 Score = 125 bits (63), Expect = 2e-25 Identities = 111/127 (87%) Strand = Plus / Plus Query: 398 tactcaggaccaactgtgcactttgtggatgagcagttcgacacagggaaaaccttagcc 457 ||||| || |||||||||||||||||||||||||| | | |||||| | || ||||| Sbjct: 24742423 tactcgggtccaactgtgcactttgtggatgagcactatggcacaggaagtactctagcc 24742482 Query: 458 caaagagttgttcctgtgttagccaatgatactccagagcaattggctgcaagggttctt 517 ||||| ||||| |||||| |||||||||||||||||||||||||||||||||| || ||| Sbjct: 24742483 caaagggttgtgcctgtgctagccaatgatactccagagcaattggctgcaagagtcctt 24742542 Query: 518 catgagg 524 ||||||| Sbjct: 24742543 catgagg 24742549 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 2 gcggtgttcgtgtccggcgggggctccaacttccggtcgatccacggggccgccctgggt 61 ||||||||||| ||||| ||||| |||||||||||| ||||||||| ||||| |||||| Sbjct: 24724706 gcggtgttcgtttccggtgggggatccaacttccgggcgatccacgacgccgctctgggt 24724765 Query: 62 gggaaggtgaacggggatgtggttgcgctcgtcaccgataagccagg 108 ||| ||||||| || |||||||||||| | || |||||||| ||||| Sbjct: 24724766 ggggaggtgaatggtgatgtggttgcgttggttaccgataaaccagg 24724812 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 533 gtttacgttgaggcagttgctgccttgtgcgaggatcgaattgtgtggcgagacgatggt 592 ||||| |||||||||||||||||| | || || || |||||||||||| |||| |||||| Sbjct: 24726304 gtttatgttgaggcagttgctgccctatgtgatgaccgaattgtgtggagagaagatggt 24726363 Query: 593 gt 594 || Sbjct: 24726364 gt 24726365
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 184 bits (93), Expect = 2e-43 Identities = 153/173 (88%) Strand = Plus / Plus Query: 229 ggtagacttcattctacttgctggttacttgaagctcatacctggtgagctagttcaggc 288 |||||||||||||||||||||||||||| |||| || ||||||| |||||||||||||| Sbjct: 26471 ggtagacttcattctacttgctggttacctgaaacttatacctgttgagctagttcagga 26530 Query: 289 atttcccagatccatgctgaatatacacccttcactgctccctgcatttggaggcaaggg 348 || ||| | |||||| ||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 26531 atatccaaaatccattttgaatattcacccttcactactcccagcatttggaggcaaagg 26590 Query: 349 ttattatggtttaaaagtgcataaagcagtcattgcatctggagccagatact 401 |||||||||||| || ||||||||||||||||| ||||| || ||||| |||| Sbjct: 26591 ttattatggtttgaaggtgcataaagcagtcatcgcatcaggggccaggtact 26643 Score = 153 bits (77), Expect = 8e-34 Identities = 131/149 (87%) Strand = Plus / Plus Query: 229 ggtagacttcattctacttgctggttacttgaagctcatacctggtgagctagttcaggc 288 ||||||||||||| |||||||||||||| |||| || ||||| | |||||||||||||| Sbjct: 42902 ggtagacttcattatacttgctggttacgtgaaacttataccggttgagctagttcagga 42961 Query: 289 atttcccagatccatgctgaatatacacccttcactgctccctgcatttggaggcaaggg 348 || ||| | |||||| ||||||| ||||||||||| ||||| |||||||||||||| || Sbjct: 42962 atatccaaaatccattttgaatattcacccttcactactcccagcatttggaggcaaagg 43021 Query: 349 ttattatggtttaaaagtgcataaagcag 377 |||||||||||| || ||||||||||||| Sbjct: 43022 ttattatggtttgaaggtgcataaagcag 43050 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 407 ccaactgtgcactttgtggatgagcagttcgacacagggaaaaccttagcccaaagagtt 466 |||||||||||||||||||||||||| | |||||||| | || |||||||||| ||| Sbjct: 26857 ccaactgtgcactttgtggatgagcactatgacacaggaaggactctagcccaaagggtt 26916 Query: 467 gttcctgtgttagccaatgatactccagagcaattggctgcaagggttcttcatgagg 524 || |||||| |||||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 26917 gtacctgtgctagccaatgatactccagagcaattggctgcaagagtccttcatgagg 26974 Score = 125 bits (63), Expect = 2e-25 Identities = 111/127 (87%) Strand = Plus / Plus Query: 398 tactcaggaccaactgtgcactttgtggatgagcagttcgacacagggaaaaccttagcc 457 ||||| || |||||||||||||||||||||||||| | | |||||| | || ||||| Sbjct: 43224 tactcgggtccaactgtgcactttgtggatgagcactatggcacaggaagtactctagcc 43283 Query: 458 caaagagttgttcctgtgttagccaatgatactccagagcaattggctgcaagggttctt 517 ||||| ||||| |||||| |||||||||||||||||||||||||||||||||| || ||| Sbjct: 43284 caaagggttgtgcctgtgctagccaatgatactccagagcaattggctgcaagagtcctt 43343 Query: 518 catgagg 524 ||||||| Sbjct: 43344 catgagg 43350 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Plus Query: 2 gcggtgttcgtgtccggcgggggctccaacttccggtcgatccacggggccgccctgggt 61 ||||||||||| ||||| ||||| |||||||||||| ||||||||| ||||| |||||| Sbjct: 25507 gcggtgttcgtttccggtgggggatccaacttccgggcgatccacgacgccgctctgggt 25566 Query: 62 gggaaggtgaacggggatgtggttgcgctcgtcaccgataagccagg 108 ||| ||||||| || |||||||||||| | || |||||||| ||||| Sbjct: 25567 ggggaggtgaatggtgatgtggttgcgttggttaccgataaaccagg 25613 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 533 gtttacgttgaggcagttgctgccttgtgcgaggatcgaattgtgtggcgagacgatggt 592 ||||| |||||||||||||||||| | || || || |||||||||||| |||| |||||| Sbjct: 27105 gtttatgttgaggcagttgctgccctatgtgatgaccgaattgtgtggagagaagatggt 27164 Query: 593 gt 594 || Sbjct: 27165 gt 27166
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 233 gacttcattctacttgctggttacttgaagctcatacctggtgagctagttcaggcattt 292 |||| ||||||||||||| | |||| ||| || ||||||| ||||||||||||||| | | Sbjct: 12961263 gactccattctacttgctagctactcgaaacttatacctgttgagctagttcaggcgtat 12961204 Query: 293 cccagatccatgctgaatatacacccttcactgctccctgcatttggaggcaagggttat 352 || ||||| || |||||| ||||||||| | ||||||||||||||||||||||||||| Sbjct: 12961203 ccgagatctatatggaatatccacccttcattactccctgcatttggaggcaagggttat 12961144 Query: 353 tatggtttaaaagtgcataaagcagtcattgcatctggagc 393 ||||||||||| ||||||||||||||| |||||||| |||| Sbjct: 12961143 tatggtttaaaggtgcataaagcagtcgttgcatctagagc 12961103 Score = 101 bits (51), Expect = 3e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 394 cagatactcaggaccaactgtgcactttgtggatgagcagttcgacacagggaaaacctt 453 |||||||||||| |||||||||||||||||||||||||| | |||| ||| | || || Sbjct: 12960856 cagatactcaggtccaactgtgcactttgtggatgagcactatgacataggaaggacttt 12960797 Query: 454 agcccaaagagttgttcctgtgttagccaatgatactccagagcaattggctgcaagggt 513 ||||||||||||||| || ||||||| ||||||| ||||||||||||| |||| || Sbjct: 12960796 agcccaaagagttgtgtctatgttagcaaatgatatattagagcaattggctacaagagt 12960737 Query: 514 tcttcatgagg 524 |||||||||| Sbjct: 12960736 ccttcatgagg 12960726 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 530 caagtttacgttgaggcagttgctgccttgtgcgaggatcgaattgtgtggcgagacgat 589 |||||||| ||||| | |||| |||||||||| || || |||||||||||| | || ||| Sbjct: 12960600 caagtttatgttgatgtagttactgccttgtgtgatgaccgaattgtgtggagggaagat 12960541 Query: 590 ggtgtccc 597 |||||||| Sbjct: 12960540 ggtgtccc 12960533 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cggggatgtggttgcgctcg 92 |||||||||||||||||||| Sbjct: 4401831 cggggatgtggttgcgctcg 4401812
>dbj|AP003619.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0577H07 Length = 126757 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 233 gacttcattctacttgctggttacttgaagctcatacctggtgagctagttcaggcattt 292 |||| ||||||||||||| | |||| ||| || ||||||| ||||||||||||||| | | Sbjct: 43640 gactccattctacttgctagctactcgaaacttatacctgttgagctagttcaggcgtat 43581 Query: 293 cccagatccatgctgaatatacacccttcactgctccctgcatttggaggcaagggttat 352 || ||||| || |||||| ||||||||| | ||||||||||||||||||||||||||| Sbjct: 43580 ccgagatctatatggaatatccacccttcattactccctgcatttggaggcaagggttat 43521 Query: 353 tatggtttaaaagtgcataaagcagtcattgcatctggagc 393 ||||||||||| ||||||||||||||| |||||||| |||| Sbjct: 43520 tatggtttaaaggtgcataaagcagtcgttgcatctagagc 43480 Score = 101 bits (51), Expect = 3e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 394 cagatactcaggaccaactgtgcactttgtggatgagcagttcgacacagggaaaacctt 453 |||||||||||| |||||||||||||||||||||||||| | |||| ||| | || || Sbjct: 43233 cagatactcaggtccaactgtgcactttgtggatgagcactatgacataggaaggacttt 43174 Query: 454 agcccaaagagttgttcctgtgttagccaatgatactccagagcaattggctgcaagggt 513 ||||||||||||||| || ||||||| ||||||| ||||||||||||| |||| || Sbjct: 43173 agcccaaagagttgtgtctatgttagcaaatgatatattagagcaattggctacaagagt 43114 Query: 514 tcttcatgagg 524 |||||||||| Sbjct: 43113 ccttcatgagg 43103 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 530 caagtttacgttgaggcagttgctgccttgtgcgaggatcgaattgtgtggcgagacgat 589 |||||||| ||||| | |||| |||||||||| || || |||||||||||| | || ||| Sbjct: 42977 caagtttatgttgatgtagttactgccttgtgtgatgaccgaattgtgtggagggaagat 42918 Query: 590 ggtgtccc 597 |||||||| Sbjct: 42917 ggtgtccc 42910
>gb|AY321442.1| Glycine max glycinamide ribonucleotide transformylase (pur3) pseudogene, complete sequence Length = 2036 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 335 tttggaggcaagggttattatggtttaaaagtgcataaagcagtcattgcatctggagc 393 |||||||||||||| | |||||| | ||||||||||||||||| ||||| |||||||| Sbjct: 1141 tttggaggcaagggcttttatggcatgaaagtgcataaagcagtaattgcttctggagc 1199 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 464 gttgttcctgtgttagccaatgatactccagagcaattggctgcaagggttct 516 ||||| |||||| | |||||||||||| | || | ||||||||||||||||| Sbjct: 1373 gttgtccctgtgcttgccaatgatactgctgaagagttggctgcaagggttct 1425
>gb|AY424958.1| Solanum tuberosum glycinamide ribonucleotide transformylase mRNA, complete cds Length = 1166 Score = 58.0 bits (29), Expect = 3e-05 Identities = 128/161 (79%) Strand = Plus / Plus Query: 233 gacttcattctacttgctggttacttgaagctcatacctggtgagctagttcaggcattt 292 ||||||||||| | ||||| ||||| ||||| || ||| |||| |||| || |||||| Sbjct: 517 gacttcattcttttagctgggtacttaaagcttattcctactgagttagtccaagcattt 576 Query: 293 cccagatccatgctgaatatacacccttcactgctccctgcatttggaggcaagggttat 352 || ||||| || | ||||| || || ||||| || || | ||||||||||| || || Sbjct: 577 ccaagatcgatatttaatattcatccgtcacttcttccatcttttggaggcaaaggctac 636 Query: 353 tatggtttaaaagtgcataaagcagtcattgcatctggagc 393 ||||| |||| ||||||||||||||||| || |||||||| Sbjct: 637 tatggcataaaggtgcataaagcagtcatagcttctggagc 677
>gb|AY189138.1| Vigna unguiculata clone pGARTN6 glycinamide ribonucleotide transformylase (pur3) mRNA, complete cds; alternatively spliced Length = 1480 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 482 aatgatactccagagcaattggctgcaagggttcttcatgaggagaaccaagtttacgtt 541 ||||||||| ||||| | ||||||||||||||||| |||||||| ||||| | || ||| Sbjct: 1043 aatgatactgcagaggagttggctgcaagggttctcaatgaggagcaccaattatatgtt 1102 Query: 542 gagg 545 |||| Sbjct: 1103 gagg 1106 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 335 tttggaggcaagggttattatggtttaaaagtgcataaagcagtcattgcatctggagc 393 |||||||||||||| || ||||| | || || ||||||||||| ||||| |||||||| Sbjct: 896 tttggaggcaagggctactatggcatgaaggttcataaagcagtaattgcttctggagc 954
>gb|AY189137.1| Vigna unguiculata clone pGARTN8 glycinamide ribonucleotide transformylase (pur3) mRNA, complete cds; alternatively spliced Length = 1458 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 482 aatgatactccagagcaattggctgcaagggttcttcatgaggagaaccaagtttacgtt 541 ||||||||| ||||| | ||||||||||||||||| |||||||| ||||| | || ||| Sbjct: 1041 aatgatactgcagaggagttggctgcaagggttctcaatgaggagcaccaattatatgtt 1100 Query: 542 gagg 545 |||| Sbjct: 1101 gagg 1104 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 335 tttggaggcaagggttattatggtttaaaagtgcataaagcagtcattgcatctggagc 393 |||||||||||||| || ||||| | || || ||||||||||| ||||| |||||||| Sbjct: 894 tttggaggcaagggctactatggcatgaaggttcataaagcagtaattgcttctggagc 952
>gb|U30875.2| Vigna unguiculata glycinamide ribonucleotide transformylase (Vupur3) mRNA, complete cds Length = 1631 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 482 aatgatactccagagcaattggctgcaagggttcttcatgaggagaaccaagtttacgtt 541 ||||||||| ||||| | ||||||||||||||||| |||||||| ||||| | || ||| Sbjct: 1157 aatgatactgcagaggagttggctgcaagggttctcaatgaggagcaccaattatatgtt 1216 Query: 542 gagg 545 |||| Sbjct: 1217 gagg 1220 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 335 tttggaggcaagggttattatggtttaaaagtgcataaagcagtcattgcatctggagc 393 |||||||||||||| || ||||| | || || ||||||||||| ||||| |||||||| Sbjct: 1010 tttggaggcaagggctactatggcatgaaggttcataaagcagtaattgcttctggagc 1068
>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0531C01 Length = 158574 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 233 gacttcattctacttgctggttacttgaagctcatacctggtgagctagttcaggc 288 |||| ||||||||||||| | |||| ||| || ||||||| ||||||||||||||| Sbjct: 64 gactccattctacttgctagctactcgaaacttatacctgttgagctagttcaggc 9
>gb|AY321444.1| Glycine max glycinamide ribonucleotide transformylase (pur3) mRNA, complete cds Length = 1376 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 335 tttggaggcaagggttattatggtttaaaagtgcataaagcagtcattgcatctggagc 393 |||||||||||||| | ||||| | |||||||| |||||||| ||||| |||||||| Sbjct: 890 tttggaggcaagggattctatggcatgaaagtgcacaaagcagtaattgcttctggagc 948
>gb|AY321443.1| Glycine max glycinamide ribonucleotide transformylase (pur3) gene, complete cds Length = 2307 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 335 tttggaggcaagggttattatggtttaaaagtgcataaagcagtcattgcatctggagc 393 |||||||||||||| | ||||| | |||||||| |||||||| ||||| |||||||| Sbjct: 1423 tttggaggcaagggattctatggcatgaaagtgcacaaagcagtaattgcttctggagc 1481
>gb|AF160196.2| Vigna unguiculata glycinamide ribonucleotide transformylase (pur3) gene, complete cds Length = 6385 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 482 aatgatactccagagcaattggctgcaagggttct 516 ||||||||| ||||| | ||||||||||||||||| Sbjct: 2629 aatgatactgcagaggagttggctgcaagggttct 2663 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 335 tttggaggcaagggttattatggtttaaaagtgcataaagcagtcattgcatctggagc 393 |||||||||||||| || ||||| | || || ||||||||||| ||||| |||||||| Sbjct: 2385 tttggaggcaagggctactatggcatgaaggttcataaagcagtaattgcttctggagc 2443
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 301 catgctgaatatacacccttcactgct 327 ||||||||| ||||||||||||||||| Sbjct: 1937502 catgctgaacatacacccttcactgct 1937476
>ref|NM_102860.2| Arabidopsis thaliana formyltetrahydrofolate deformylase/ hydroxymethyl-, formyl- and related transferase AT1G31220 mRNA, complete cds Length = 1416 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 ggaggcaagggttattatggtttaaaagtgcataaagc 375 |||||||| ||| ||||||| |||||||||||||||| Sbjct: 842 ggaggcaaaggtctttatggtataaaagtgcataaagc 879 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 482 aatgatactccagagcaattggctgcaagggttcttcatgagga 525 |||||||| ||||| ||||||| |||||||||||||||||| Sbjct: 986 aatgatacaccagaagaattggccaaaagggttcttcatgagga 1029
>gb|AC125459.4| Mus musculus BAC clone RP24-418N13 from chromosome 8, complete sequence Length = 194237 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 502 ggctgcaagggttcttcatgag 523 |||||||||||||||||||||| Sbjct: 125927 ggctgcaagggttcttcatgag 125948
>emb|X74767.2|ATPUR3 Arabidopsis thaliana mRNA for phosphoribosylglycinamide formyltransferase encoded by PUR3 gene Length = 1308 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 ggaggcaagggttattatggtttaaaagtgcataaagc 375 |||||||| ||| ||||||| |||||||||||||||| Sbjct: 750 ggaggcaaaggtctttatggtataaaagtgcataaagc 787 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 482 aatgatactccagagcaattggctgcaagggttcttcatgagga 525 |||||||| ||||| ||||||| |||||||||||||||||| Sbjct: 894 aatgatacaccagaagaattggccaaaagggttcttcatgagga 937
>gb|BT006080.1| Arabidopsis thaliana clone U20591 putative phosphoribosylglycinamide formyltransferase (At1g31220) mRNA, complete cds Length = 910 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 ggaggcaagggttattatggtttaaaagtgcataaagc 375 |||||||| ||| ||||||| |||||||||||||||| Sbjct: 580 ggaggcaaaggtctttatggtataaaagtgcataaagc 617 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 482 aatgatactccagagcaattggctgcaagggttcttcatgagga 525 |||||||| ||||| ||||||| |||||||||||||||||| Sbjct: 724 aatgatacaccagaagaattggccaaaagggttcttcatgagga 767
>emb|BX816234.1|CNS0ABXA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH36ZC09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1377 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 ggaggcaagggttattatggtttaaaagtgcataaagc 375 |||||||| ||| ||||||| |||||||||||||||| Sbjct: 858 ggaggcaaaggtctttatggtataaaagtgcataaagc 895
>gb|BT003877.1| Arabidopsis thaliana clone RAFL15-13-J10 (R20591) putative phosphoribosylglycinamide formyltransferase (At1g31220) mRNA, complete cds Length = 1425 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 ggaggcaagggttattatggtttaaaagtgcataaagc 375 |||||||| ||| ||||||| |||||||||||||||| Sbjct: 842 ggaggcaaaggtctttatggtataaaagtgcataaagc 879 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 482 aatgatactccagagcaattggctgcaagggttcttcatgagga 525 |||||||| ||||| ||||||| |||||||||||||||||| Sbjct: 986 aatgatacaccagaagaattggccaaaagggttcttcatgagga 1029
>gb|AC004793.2|F28K20 Arabidopsis thaliana chromosome 1 BAC F28K20 sequence, complete sequence Length = 76458 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Plus Query: 338 ggaggcaagggttattatggtttaaaagtgcataaagc 375 |||||||| ||| ||||||| |||||||||||||||| Sbjct: 69062 ggaggcaaaggtctttatggtataaaagtgcataaagc 69099
>gb|AC130537.4| Mus musculus BAC clone RP23-412D3 from 8, complete sequence Length = 194088 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 502 ggctgcaagggttcttcatgag 523 |||||||||||||||||||||| Sbjct: 6302 ggctgcaagggttcttcatgag 6323
>gb|AC108163.3| Homo sapiens BAC clone RP11-694K14 from 4, complete sequence Length = 95304 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 aaaaccttagcccaaagagtt 466 ||||||||||||||||||||| Sbjct: 70104 aaaaccttagcccaaagagtt 70124
>ref|XM_634951.1| Dictyostelium discoideum hypothetical protein (DDB0220651), partial mRNA Length = 2388 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gtatgcaaggtgcaatggca 143 |||||||||||||||||||| Sbjct: 431 gtatgcaaggtgcaatggca 450
>gb|AC148310.2| Pan troglodytes BAC clone RP43-31J11 from 7, complete sequence Length = 203635 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 tgaatgctctgagggatctg 226 |||||||||||||||||||| Sbjct: 114088 tgaatgctctgagggatctg 114107
>gb|AC087421.2| Felis catus clone RP86-177C24, complete sequence Length = 141881 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 204 ttctgaatgctctgagggat 223 |||||||||||||||||||| Sbjct: 73469 ttctgaatgctctgagggat 73488
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 413 gtgcactttgtggatgagca 432 |||||||||||||||||||| Sbjct: 3572358 gtgcactttgtggatgagca 3572377
>gb|AC144726.6| Medicago truncatula clone mth2-7k13, complete sequence Length = 138586 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gcatttggaggcaagggtta 351 |||||||||||||||||||| Sbjct: 135149 gcatttggaggcaagggtta 135168
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 gccaggctgcggtggcgccg 122 |||||||||||||||||||| Sbjct: 3290218 gccaggctgcggtggcgccg 3290199
>gb|AC095056.3| Homo sapiens BAC clone RP11-373J21 from 4, complete sequence Length = 176993 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 306 tgaatatacacccttcactgctcc 329 ||||||||||||||||||| |||| Sbjct: 35494 tgaatatacacccttcactactcc 35471
>gb|AC068669.21| Homo sapiens chromosome 17, clone RP11-749I16, complete sequence Length = 194780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 ccacagatgaacttctgaat 211 |||||||||||||||||||| Sbjct: 185447 ccacagatgaacttctgaat 185428
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ggcattcccgtggtcgtgtt 159 |||||||||||||||||||| Sbjct: 2468974 ggcattcccgtggtcgtgtt 2468955
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cggggatgtggttgcgctcg 92 |||||||||||||||||||| Sbjct: 49512 cggggatgtggttgcgctcg 49493
>dbj|AK105241.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-D06, full insert sequence Length = 1800 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cggggatgtggttgcgctcg 92 |||||||||||||||||||| Sbjct: 764 cggggatgtggttgcgctcg 783
>emb|AL928792.9| Mouse DNA sequence from clone RP23-88O15 on chromosome 2, complete sequence Length = 257463 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 accagagggggtctccacag 197 |||||||||||||||||||| Sbjct: 203124 accagagggggtctccacag 203105 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,462,693 Number of Sequences: 3902068 Number of extensions: 4462693 Number of successful extensions: 91702 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91427 Number of HSP's gapped (non-prelim): 259 length of query: 597 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 574 effective length of database: 17,143,297,704 effective search space: 9840252882096 effective search space used: 9840252882096 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
