| Clone Name | baal30c03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK064773.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A22, full insert sequence Length = 3746 Score = 446 bits (225), Expect = e-122 Identities = 397/453 (87%), Gaps = 1/453 (0%) Strand = Plus / Plus Query: 154 acacggacactgattttgaataggccaaagcagttgaatgccctctcctctgcaatggtt 213 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1214 acacggacattggttttgaataggccaaagcagttgaatgccctctcctctgcaatgata 1273 Query: 214 acaggacttctgaaatgtttcacttcttatgaggaagaaaacacagttaaactattgatt 273 || | || ||| || |||||| ||||||||||||| | |||||||||||||||| Sbjct: 1274 acgtgttttttgaggtgcttcactgcttatgaggaagatgatggagttaaactattgatt 1333 Query: 274 gtcaagggaaatggaagagcattttgcgcaggaggtgatgttgctgaagtcgcccaatct 333 || |||||||| |||||||||||||| ||||| || |||||||||| ||| | || ||| Sbjct: 1334 gtgaagggaaaaggaagagcattttgtgcaggtggagatgttgctgcagttgtccggtct 1393 Query: 334 ataaataatgatagctggaaatatggtgctgattttttccgtactgaatttctgttgaac 393 |||||||||||||||||||||||||||||| |||||||||| | |||||||||||| ||| Sbjct: 1394 ataaataatgatagctggaaatatggtgctcattttttccgaaatgaatttctgttaaac 1453 Query: 394 tatatcattgcaacttatagcaaaccacaggtttctctacttactggaatagtcatgggt 453 |||||||||||||| ||||||||||| |||||||| || || |||||||| ||||||||| Sbjct: 1454 tatatcattgcaacatatagcaaacctcaggtttcgcttctaactggaattgtcatgggt 1513 Query: 454 ggaggtgctggtgtttctatacatggaaggtttcgggttgccacggagaacacggttttt 513 |||||||||||||||||||||||||||||||| || |||| ||| || | |||||||||| Sbjct: 1514 ggaggtgctggtgtttctatacatggaaggttccgagttgtcacagatagcacggttttt 1573 Query: 514 gcaatgccagaaacagcactgggactcttcccagatataggggcttcttattttctttct 573 || |||||||||||||| |||| ||||| |||||||| |||||||| |||||||| ||| Sbjct: 1574 gctatgccagaaacagcgttgggtctctttccagatattggggcttcatattttctatct 1633 Query: 574 agactaccctgggttctatggagagtatgttgg 606 |||| | |||||||||||||||||||||||| Sbjct: 1634 cgact-tcttgggttctatggagagtatgttgg 1665
>dbj|AK100907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132F01, full insert sequence Length = 2189 Score = 438 bits (221), Expect = e-120 Identities = 393/449 (87%), Gaps = 1/449 (0%) Strand = Plus / Plus Query: 158 ggacactgattttgaataggccaaagcagttgaatgccctctcctctgcaatggttacag 217 ||||| || |||||||||||||||||||||||||||||||||||||||||||| | || Sbjct: 601 ggacattggttttgaataggccaaagcagttgaatgccctctcctctgcaatgataacgt 660 Query: 218 gacttctgaaatgtttcacttcttatgaggaagaaaacacagttaaactattgattgtca 277 | || ||| || |||||| ||||||||||||| | |||||||||||||||||| | Sbjct: 661 gttttttgaggtgcttcactgcttatgaggaagatgatggagttaaactattgattgtga 720 Query: 278 agggaaatggaagagcattttgcgcaggaggtgatgttgctgaagtcgcccaatctataa 337 ||||||| |||||||||||||| ||||| || |||||||||| ||| | || ||||||| Sbjct: 721 agggaaaaggaagagcattttgtgcaggtggagatgttgctgcagttgtccggtctataa 780 Query: 338 ataatgatagctggaaatatggtgctgattttttccgtactgaatttctgttgaactata 397 |||||||||||||||||||||||||| |||||||||| | |||||||||||| ||||||| Sbjct: 781 ataatgatagctggaaatatggtgctcattttttccgaaatgaatttctgttaaactata 840 Query: 398 tcattgcaacttatagcaaaccacaggtttctctacttactggaatagtcatgggtggag 457 |||||||||| ||||||||||| |||||||| || || |||||||| ||||||||||||| Sbjct: 841 tcattgcaacatatagcaaacctcaggtttcgcttctaactggaattgtcatgggtggag 900 Query: 458 gtgctggtgtttctatacatggaaggtttcgggttgccacggagaacacggtttttgcaa 517 |||||||||||||||||||||||||||| || |||| ||| || | |||||||||||| | Sbjct: 901 gtgctggtgtttctatacatggaaggttccgagttgtcacagatagcacggtttttgcta 960 Query: 518 tgccagaaacagcactgggactcttcccagatataggggcttcttattttctttctagac 577 ||||||||||||| |||| ||||| |||||||| |||||||| |||||||| ||| ||| Sbjct: 961 tgccagaaacagcgttgggtctctttccagatattggggcttcatattttctatctcgac 1020 Query: 578 taccctgggttctatggagagtatgttgg 606 | | |||||||||||||||||||||||| Sbjct: 1021 t-tcttgggttctatggagagtatgttgg 1048
>dbj|AK071318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086L03, full insert sequence Length = 2049 Score = 438 bits (221), Expect = e-120 Identities = 396/453 (87%), Gaps = 1/453 (0%) Strand = Plus / Plus Query: 154 acacggacactgattttgaataggccaaagcagttgaatgccctctcctctgcaatggtt 213 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 458 acacggacattggttttgaataggccaaagcagttgaatgccctctcctctgcaatgata 517 Query: 214 acaggacttctgaaatgtttcacttcttatgaggaagaaaacacagttaaactattgatt 273 || | || ||| || |||||| ||||||||||||| | |||||||||||||||| Sbjct: 518 acgtgttttttgaggtgcttcactgcttatgaggaagatgatggagttaaactattgatt 577 Query: 274 gtcaagggaaatggaagagcattttgcgcaggaggtgatgttgctgaagtcgcccaatct 333 || |||||||| |||||||||||||| ||||| || |||||||||| ||| | || ||| Sbjct: 578 gtgaagggaaaaggaagagcattttgtgcaggtggagatgttgctgcagttgtccggtct 637 Query: 334 ataaataatgatagctggaaatatggtgctgattttttccgtactgaatttctgttgaac 393 |||||||||||||||||||||||||||||| |||||||||| | |||||||||||| ||| Sbjct: 638 ataaataatgatagctggaaatatggtgctcattttttccgaaatgaatttctgttaaac 697 Query: 394 tatatcattgcaacttatagcaaaccacaggtttctctacttactggaatagtcatgggt 453 |||||||||||||| ||||||||||| |||||||| || || |||||||| ||||||||| Sbjct: 698 tatatcattgcaacatatagcaaacctcaggtttcgcttctaactggaattgtcatgggt 757 Query: 454 ggaggtgctggtgtttctatacatggaaggtttcgggttgccacggagaacacggttttt 513 |||||||||||||||||||||| ||||||||| || |||| ||| || | |||||||||| Sbjct: 758 ggaggtgctggtgtttctatacgtggaaggttccgagttgtcacagatagcacggttttt 817 Query: 514 gcaatgccagaaacagcactgggactcttcccagatataggggcttcttattttctttct 573 || |||||||||||||| |||| ||||| |||||||| |||||||| |||||||| ||| Sbjct: 818 gctatgccagaaacagcgttgggtctctttccagatattggggcttcatattttctatct 877 Query: 574 agactaccctgggttctatggagagtatgttgg 606 |||| | |||||||||||||||||||||||| Sbjct: 878 cgact-tcttgggttctatggagagtatgttgg 909
>ref|NM_197847.1| Oryza sativa (japonica cultivar-group) putative enoyl-CoA-hydratase (OSJNBa0003O19.10), mRNA Length = 580 Score = 432 bits (218), Expect = e-118 Identities = 421/486 (86%), Gaps = 2/486 (0%) Strand = Plus / Plus Query: 121 tccgaccaggtactggtggaagcaaatggctctacacggacactgattttgaataggcca 180 ||||||||||| |||| || |||||||| ||||||||| || || ||||||||||| Sbjct: 25 tccgaccaggttttggtagaggcaaatggtgtaacacggacattgcttatgaataggcca 84 Query: 181 aagcagttgaatgccctctcctctgcaatggttacaggacttctgaaatgtttcacttct 240 |||||||||||||||||||||||||||||| | |||||| || ||| || |||||| || Sbjct: 85 aagcagttgaatgccctctcctctgcaatgataacaggatttttgaggtgcttcactgct 144 Query: 241 tatgaggaagaaaacacagttaaactattgattgtcaagggaaatggaagagcattttgc 300 ||||||||||| | |||||||||||||||||| ||||| || |||||||||||||| Sbjct: 145 tatgaggaagatgaaggagttaaactattgattgtgaaggggaaaggaagagcattttgt 204 Query: 301 gcaggaggtgatgttgctgaagtcgcccaatctataaataatgatagctggaaatatggt 360 || || || |||||||||| ||| | || ||||||||||||||||||||||||||| || Sbjct: 205 gctggtggagatgttgctgcagttgtccggtctataaataatgatagctggaaatatagt 264 Query: 361 gctgattttttccgtactgaatttctgttgaactatatcattgcaacttatagcaaacca 420 ||| |||||||||| | |||||||||||||||||||||||||||||| |||| |||||| Sbjct: 265 gctcattttttccgaaatgaatttctgttgaactatatcattgcaacatataacaaacct 324 Query: 421 caggtttctctacttactggaatagtcatgggtggaggtgctggtgtttctatacatgga 480 |||||||| || || |||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 325 caggtttcacttctcactggaattgtcatgggtggaggtgccggtgtttctatacatgga 384 Query: 481 aggtttcgggttgccacggagaacacggtttttgcaatgccagaaacagcactgggactc 540 ||||| || |||| ||| |||| |||||||||||| ||||||||||||||| |||| ||| Sbjct: 385 aggttccgagttgtcacagagagcacggtttttgctatgccagaaacagcattgggtctc 444 Query: 541 ttcccagatataggggcttcttattttctttctagactaccctgggttctatggagagta 600 || |||||||| ||||| || |||||||| ||| |||| |||||||||||| ||||||| Sbjct: 445 tttccagatattggggcctcatattttctatctcgact-tcctgggttctat-gagagta 502 Query: 601 tgttgg 606 |||||| Sbjct: 503 tgttgg 508
>gb|AY106271.1| Zea mays PCO104773 mRNA sequence Length = 924 Score = 178 bits (90), Expect = 1e-41 Identities = 181/210 (86%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 397 atcattgcaacttatagcaaaccacaggtttctctacttactggaatagtcatgggtgga 456 |||||||| ||||| | ||||| |||||||| | |||| |||||| |||||||||||| Sbjct: 157 atcattgcgacttacataaaacctcaggtttccattcttagtggaattgtcatgggtgga 216 Query: 457 ggtgctggtgtttctatacatggaaggtttcgggttgccacggagaacacggtttttgca 516 || ||||||||||| ||||||||||| ||||| |||||||| || |||||| |||||||| Sbjct: 217 ggagctggtgtttcaatacatggaagatttcgagttgccactgataacacgatttttgca 276 Query: 517 atgccagaaacagcactgggactcttcccagatataggggcttcttattttctttctaga 576 |||||||||||||| || || ||||| |||||| ||||||| ||||||||||| ||| | Sbjct: 277 atgccagaaacagctctaggcctctttccagatgtaggggcctcttattttctatctcgg 336 Query: 577 ctaccctgggttctatggagagtatgttgg 606 ||| || |||||||||||||| |||||||| Sbjct: 337 cta-ccagggttctatggagaatatgttgg 365
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 343 gatagctggaaatatggtgctgattttttccgtactgaatttctgttgaactatatcatt 402 ||||||||||||||||||||| |||||||||| | |||||||||||| |||||||||||| Sbjct: 9357987 gatagctggaaatatggtgctcattttttccgaaatgaatttctgttaaactatatcatt 9358046 Query: 403 gcaacttatagcaaaccacaggt 425 ||||| ||||||||||| ||||| Sbjct: 9358047 gcaacatatagcaaacctcaggt 9358069 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 154 acacggacactgattttgaataggccaaagcagttgaatgccctctcctctgcaatggt 212 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9357021 acacggacattggttttgaataggccaaagcagttgaatgccctctcctctgcaatggt 9357079 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 422 aggtttctctacttactggaatagtcatgggtggaggtgctggtgtttctatacatggaa 481 ||||||| || || |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9358162 aggtttcgcttctaactggaattgtcatgggtggaggtgctggtgtttctatacatggaa 9358221 Query: 482 ggtt 485 |||| Sbjct: 9358222 ggtt 9358225 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 507 ggtttttgcaatgccagaaacagcactgggactcttcccagatataggggcttcttattt 566 ||||||||| |||||||||||||| |||| ||||| |||||||| |||||||| ||||| Sbjct: 9358417 ggtttttgctatgccagaaacagcgttgggtctctttccagatattggggcttcatattt 9358476 Query: 567 tctttctagact 578 ||| ||| |||| Sbjct: 9358477 tctatctcgact 9358488 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 278 agggaaatggaagagcattttgcgcaggaggtgatgttgctgaagtcgcccaatctataa 337 ||||||| |||||||||||||| ||||| || |||||||||| ||| | || ||||||| Sbjct: 9357725 agggaaaaggaagagcattttgtgcaggtggagatgttgctgcagttgtccggtctataa 9357784 Query: 338 ataatg 343 |||||| Sbjct: 9357785 ataatg 9357790 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 232 ttcacttcttatgaggaagaaaacacagttaaactattgattgtcaagg 280 |||||| ||||||||||||| | |||||||||||||||||| |||| Sbjct: 9357225 ttcactgcttatgaggaagatgatggagttaaactattgattgtgaagg 9357273
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 343 gatagctggaaatatggtgctgattttttccgtactgaatttctgttgaactatatcatt 402 ||||||||||||||||||||| |||||||||| | |||||||||||| |||||||||||| Sbjct: 9357872 gatagctggaaatatggtgctcattttttccgaaatgaatttctgttaaactatatcatt 9357931 Query: 403 gcaacttatagcaaaccacaggt 425 ||||| ||||||||||| ||||| Sbjct: 9357932 gcaacatatagcaaacctcaggt 9357954 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 154 acacggacactgattttgaataggccaaagcagttgaatgccctctcctctgcaatggt 212 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9356906 acacggacattggttttgaataggccaaagcagttgaatgccctctcctctgcaatggt 9356964 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Plus Query: 422 aggtttctctacttactggaatagtcatgggtggaggtgctggtgtttctatacatggaa 481 ||||||| || || |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9358047 aggtttcgcttctaactggaattgtcatgggtggaggtgctggtgtttctatacatggaa 9358106 Query: 482 ggtt 485 |||| Sbjct: 9358107 ggtt 9358110 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 507 ggtttttgcaatgccagaaacagcactgggactcttcccagatataggggcttcttattt 566 ||||||||| |||||||||||||| |||| ||||| |||||||| |||||||| ||||| Sbjct: 9358302 ggtttttgctatgccagaaacagcgttgggtctctttccagatattggggcttcatattt 9358361 Query: 567 tctttctagact 578 ||| ||| |||| Sbjct: 9358362 tctatctcgact 9358373 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 278 agggaaatggaagagcattttgcgcaggaggtgatgttgctgaagtcgcccaatctataa 337 ||||||| |||||||||||||| ||||| || |||||||||| ||| | || ||||||| Sbjct: 9357610 agggaaaaggaagagcattttgtgcaggtggagatgttgctgcagttgtccggtctataa 9357669 Query: 338 ataatg 343 |||||| Sbjct: 9357670 ataatg 9357675 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 232 ttcacttcttatgaggaagaaaacacagttaaactattgattgtcaagg 280 |||||| ||||||||||||| | |||||||||||||||||| |||| Sbjct: 9357110 ttcactgcttatgaggaagatgatggagttaaactattgattgtgaagg 9357158
>emb|AL731744.6|CNS08C7T Oryza sativa chromosome 12, . BAC OSJNBa0026C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 190718 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Minus Query: 343 gatagctggaaatatggtgctgattttttccgtactgaatttctgttgaactatatcatt 402 ||||||||||||||||||||| |||||||||| | |||||||||||| |||||||||||| Sbjct: 81068 gatagctggaaatatggtgctcattttttccgaaatgaatttctgttaaactatatcatt 81009 Query: 403 gcaacttatagcaaaccacaggt 425 ||||| ||||||||||| ||||| Sbjct: 81008 gcaacatatagcaaacctcaggt 80986 Score = 101 bits (51), Expect = 3e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 154 acacggacactgattttgaataggccaaagcagttgaatgccctctcctctgcaatggt 212 ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82034 acacggacattggttttgaataggccaaagcagttgaatgccctctcctctgcaatggt 81976 Score = 95.6 bits (48), Expect = 2e-16 Identities = 60/64 (93%) Strand = Plus / Minus Query: 422 aggtttctctacttactggaatagtcatgggtggaggtgctggtgtttctatacatggaa 481 ||||||| || || |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 80893 aggtttcgcttctaactggaattgtcatgggtggaggtgctggtgtttctatacatggaa 80834 Query: 482 ggtt 485 |||| Sbjct: 80833 ggtt 80830 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 507 ggtttttgcaatgccagaaacagcactgggactcttcccagatataggggcttcttattt 566 ||||||||| |||||||||||||| |||| ||||| |||||||| |||||||| ||||| Sbjct: 80638 ggtttttgctatgccagaaacagcgttgggtctctttccagatattggggcttcatattt 80579 Query: 567 tctttctagact 578 ||| ||| |||| Sbjct: 80578 tctatctcgact 80567 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 278 agggaaatggaagagcattttgcgcaggaggtgatgttgctgaagtcgcccaatctataa 337 ||||||| |||||||||||||| ||||| || |||||||||| ||| | || ||||||| Sbjct: 81330 agggaaaaggaagagcattttgtgcaggtggagatgttgctgcagttgtccggtctataa 81271 Query: 338 ataatg 343 |||||| Sbjct: 81270 ataatg 81265 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 232 ttcacttcttatgaggaagaaaacacagttaaactattgattgtcaagg 280 |||||| ||||||||||||| | |||||||||||||||||| |||| Sbjct: 81830 ttcactgcttatgaggaagatgatggagttaaactattgattgtgaagg 81782
>gb|AF190450.1|AF190450 Avicennia marina enoyl-CoA-hydratase mRNA, complete cds Length = 1536 Score = 115 bits (58), Expect = 2e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 415 aaaccacaggtttctctacttactggaatagtcatgggtggaggtgctggtgtttctata 474 ||||| ||||||||| | |||| |||||| |||||||| ||||| || |||| ||| ||| Sbjct: 230 aaaccccaggtttctattcttaatggaattgtcatgggaggaggagcaggtgcttccata 289 Query: 475 catggaaggtttcgggttgccacggagaacacggtttttgcaatgccagaaacagcactg 534 ||||| || || || ||||| |||||||| || ||||||||||||| |||||||||||| Sbjct: 290 catggtagattccgtgttgctacggagaattcgctttttgcaatgcctgaaacagcactg 349 Query: 535 ggactcttcccagatataggggcttc 560 ||||| |||||||| ||||| ||||| Sbjct: 350 ggacttttcccagacataggcgcttc 375 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 277 aagggaaatggaagagcattttgcgcaggaggtgatgtt 315 |||||||| |||||||||||||| || |||||||||||| Sbjct: 92 aagggaaaaggaagagcattttgtgctggaggtgatgtt 130
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 343 gatagctggaaatatggtgctgattttttccgtactgaatttctgttgaactatatcatt 402 ||||||||||||||| ||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 22218221 gatagctggaaatatagtgctcattttttccgaaatgaatttctgttgaactatatcatt 22218162 Query: 403 gcaacttatagcaaaccacaggt 425 ||||| |||| |||||| ||||| Sbjct: 22218161 gcaacatataacaaacctcaggt 22218139 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 422 aggtttctctacttactggaatagtcatgggtggaggtgctggtgtttctatacatggaa 481 ||||||| || || |||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 22218043 aggtttcacttctcactggaattgtcatgggtggaggtgccggtgtttctatacatggaa 22217984 Query: 482 ggtttcgggttgccacggagaacacggt 509 |||| || |||| ||| |||| |||||| Sbjct: 22217983 ggttccgagttgtcacagagagcacggt 22217956 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 154 acacggacactgattttgaataggccaaagcagttgaatgccctctcctctgcaatggt 212 ||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22219155 acacggacattgcttatgaataggccaaagcagttgaatgccctctcctctgcaatggt 22219097 Score = 77.8 bits (39), Expect = 4e-11 Identities = 76/87 (87%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 507 ggtttttgcaatgccagaaacagcactgggactcttcccagatataggggcttcttattt 566 ||||||||| ||||||||||||||| |||| ||||| |||||||| ||||| || ||||| Sbjct: 22217787 ggtttttgctatgccagaaacagcattgggtctctttccagatattggggcctcatattt 22217728 Query: 567 tctttctagactaccctgggttctatg 593 ||| ||| |||| ||||||||||||| Sbjct: 22217727 tctatctcgact-tcctgggttctatg 22217702 Score = 48.1 bits (24), Expect = 0.034 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 272 ttgtcaagggaaatggaagagcattttgcgcaggaggtgatgttgctgaagtcgcccaat 331 |||||| |||||| |||||||||||||| || || || |||||||||| ||| | || | Sbjct: 22218474 ttgtcaggggaaa-ggaagagcattttgtgctggtggagatgttgctgcagttgtccggt 22218416 Query: 332 ctataaataatg 343 |||||||||||| Sbjct: 22218415 ctataaataatg 22218404 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 232 ttcacttcttatgaggaagaaaacacagttaaactattgattgtcaagg 280 |||||| ||||||||||||| | |||||||||||||||||| |||| Sbjct: 22218951 ttcactgcttatgaggaagatgaaggagttaaactattgattgtgaagg 22218903
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 343 gatagctggaaatatggtgctgattttttccgtactgaatttctgttgaactatatcatt 402 ||||||||||||||| ||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 35464 gatagctggaaatatagtgctcattttttccgaaatgaatttctgttgaactatatcatt 35405 Query: 403 gcaacttatagcaaaccacaggt 425 ||||| |||| |||||| ||||| Sbjct: 35404 gcaacatataacaaacctcaggt 35382 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 422 aggtttctctacttactggaatagtcatgggtggaggtgctggtgtttctatacatggaa 481 ||||||| || || |||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 35286 aggtttcacttctcactggaattgtcatgggtggaggtgccggtgtttctatacatggaa 35227 Query: 482 ggtttcgggttgccacggagaacacggt 509 |||| || |||| ||| |||| |||||| Sbjct: 35226 ggttccgagttgtcacagagagcacggt 35199 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 154 acacggacactgattttgaataggccaaagcagttgaatgccctctcctctgcaatggt 212 ||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36398 acacggacattgcttatgaataggccaaagcagttgaatgccctctcctctgcaatggt 36340 Score = 77.8 bits (39), Expect = 4e-11 Identities = 76/87 (87%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 507 ggtttttgcaatgccagaaacagcactgggactcttcccagatataggggcttcttattt 566 ||||||||| ||||||||||||||| |||| ||||| |||||||| ||||| || ||||| Sbjct: 35030 ggtttttgctatgccagaaacagcattgggtctctttccagatattggggcctcatattt 34971 Query: 567 tctttctagactaccctgggttctatg 593 ||| ||| |||| ||||||||||||| Sbjct: 34970 tctatctcgact-tcctgggttctatg 34945 Score = 48.1 bits (24), Expect = 0.034 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 272 ttgtcaagggaaatggaagagcattttgcgcaggaggtgatgttgctgaagtcgcccaat 331 |||||| |||||| |||||||||||||| || || || |||||||||| ||| | || | Sbjct: 35717 ttgtcaggggaaa-ggaagagcattttgtgctggtggagatgttgctgcagttgtccggt 35659 Query: 332 ctataaataatg 343 |||||||||||| Sbjct: 35658 ctataaataatg 35647 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 232 ttcacttcttatgaggaagaaaacacagttaaactattgattgtcaagg 280 |||||| ||||||||||||| | |||||||||||||||||| |||| Sbjct: 36194 ttcactgcttatgaggaagatgaaggagttaaactattgattgtgaagg 36146
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Minus Query: 343 gatagctggaaatatggtgctgattttttccgtactgaatttctgttgaactatatcatt 402 ||||||||||||||| ||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 22230289 gatagctggaaatatagtgctcattttttccgaaatgaatttctgttgaactatatcatt 22230230 Query: 403 gcaacttatagcaaaccacaggt 425 ||||| |||| |||||| ||||| Sbjct: 22230229 gcaacatataacaaacctcaggt 22230207 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 422 aggtttctctacttactggaatagtcatgggtggaggtgctggtgtttctatacatggaa 481 ||||||| || || |||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 22230111 aggtttcacttctcactggaattgtcatgggtggaggtgccggtgtttctatacatggaa 22230052 Query: 482 ggtttcgggttgccacggagaacacggt 509 |||| || |||| ||| |||| |||||| Sbjct: 22230051 ggttccgagttgtcacagagagcacggt 22230024 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 154 acacggacactgattttgaataggccaaagcagttgaatgccctctcctctgcaatggt 212 ||||||||| || || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22231223 acacggacattgcttatgaataggccaaagcagttgaatgccctctcctctgcaatggt 22231165 Score = 77.8 bits (39), Expect = 4e-11 Identities = 76/87 (87%), Gaps = 1/87 (1%) Strand = Plus / Minus Query: 507 ggtttttgcaatgccagaaacagcactgggactcttcccagatataggggcttcttattt 566 ||||||||| ||||||||||||||| |||| ||||| |||||||| ||||| || ||||| Sbjct: 22229855 ggtttttgctatgccagaaacagcattgggtctctttccagatattggggcctcatattt 22229796 Query: 567 tctttctagactaccctgggttctatg 593 ||| ||| |||| ||||||||||||| Sbjct: 22229795 tctatctcgact-tcctgggttctatg 22229770 Score = 48.1 bits (24), Expect = 0.034 Identities = 61/72 (84%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 272 ttgtcaagggaaatggaagagcattttgcgcaggaggtgatgttgctgaagtcgcccaat 331 |||||| |||||| |||||||||||||| || || || |||||||||| ||| | || | Sbjct: 22230542 ttgtcaggggaaa-ggaagagcattttgtgctggtggagatgttgctgcagttgtccggt 22230484 Query: 332 ctataaataatg 343 |||||||||||| Sbjct: 22230483 ctataaataatg 22230472 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 232 ttcacttcttatgaggaagaaaacacagttaaactattgattgtcaagg 280 |||||| ||||||||||||| | |||||||||||||||||| |||| Sbjct: 22231019 ttcactgcttatgaggaagatgaaggagttaaactattgattgtgaagg 22230971
>gb|AF462210.1| Narcissus pseudonarcissus putative enoyl CoA hydratase mRNA, partial cds Length = 458 Score = 93.7 bits (47), Expect = 6e-16 Identities = 113/135 (83%) Strand = Plus / Plus Query: 438 tggaatagtcatgggtggaggtgctggtgtttctatacatggaaggtttcgggttgccac 497 |||||| || ||||| || || ||||||||||| || |||||||||||||||||||| || Sbjct: 21 tggaattgttatgggaggtggggctggtgtttccattcatggaaggtttcgggttgctac 80 Query: 498 ggagaacacggtttttgcaatgccagaaacagcactgggactcttcccagatataggggc 557 || || |||| ||||| ||||| ||||||| | |||| | |||||||| |||||||| Sbjct: 81 agaaaaatcggtgtttgccatgcctgaaacagtattgggtttgttcccagacataggggc 140 Query: 558 ttcttattttctttc 572 ||| ||||||||||| Sbjct: 141 ttcatattttctttc 155
>ref|NM_128617.2| Arabidopsis thaliana catalytic AT2G30650 mRNA, complete cds Length = 1269 Score = 67.9 bits (34), Expect = 4e-08 Identities = 92/110 (83%), Gaps = 1/110 (0%) Strand = Plus / Plus Query: 499 gagaacacggtttttgcaatgccagaaacagcactgggactcttcccagatataggggct 558 |||||||||||||| |||||||| || ||||| || || ||||| |||||| ||||||| Sbjct: 520 gagaacacggttttcgcaatgcctgagacagctctagggctctttccagatgtaggggcc 579 Query: 559 tcttattttctttctagactaccctgggttctatggagagtatgttggcc 608 ||||| || | || ||||| |||||| || | ||||||||||||||||| Sbjct: 580 tcttacttcttgtcaagact-ccctggattttttggagagtatgttggcc 628
>gb|DQ446582.1| Arabidopsis thaliana clone pENTR221-At2g30650 3-hydroxyisobutyryl-coenzyme A hydrolase (At2g30650) mRNA, complete cds Length = 1202 Score = 67.9 bits (34), Expect = 4e-08 Identities = 92/110 (83%), Gaps = 1/110 (0%) Strand = Plus / Plus Query: 499 gagaacacggtttttgcaatgccagaaacagcactgggactcttcccagatataggggct 558 |||||||||||||| |||||||| || ||||| || || ||||| |||||| ||||||| Sbjct: 453 gagaacacggttttcgcaatgcctgagacagctctagggctctttccagatgtaggggcc 512 Query: 559 tcttattttctttctagactaccctgggttctatggagagtatgttggcc 608 ||||| || | || ||||| |||||| || | ||||||||||||||||| Sbjct: 513 tcttacttcttgtcaagact-ccctggattttttggagagtatgttggcc 561
>ref|NM_001037078.1| Arabidopsis thaliana CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1); 3-hydroxyisobutyryl-CoA hydrolase AT5G65940 (CHY1) transcript variant AT5G65940.2 mRNA, complete cds Length = 1425 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 499 gagaacacggtttttgcaatgccagaaacagcactgggactcttcccagatatagg 554 ||||||||||||||||| ||||| || ||||| ||||| ||||| |||||| |||| Sbjct: 473 gagaacacggtttttgccatgcctgagacagctctggggctctttccagatgtagg 528
>ref|NM_125991.2| Arabidopsis thaliana CHY1 (BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1); 3-hydroxyisobutyryl-CoA hydrolase AT5G65940 (CHY1) transcript variant AT5G65940.1 mRNA, complete cds Length = 1385 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 499 gagaacacggtttttgcaatgccagaaacagcactgggactcttcccagatatagg 554 ||||||||||||||||| ||||| || ||||| ||||| ||||| |||||| |||| Sbjct: 428 gagaacacggtttttgccatgcctgagacagctctggggctctttccagatgtagg 483
>ref|NM_128618.2| Arabidopsis thaliana catalytic AT2G30660 mRNA, complete cds Length = 1137 Score = 56.0 bits (28), Expect = 1e-04 Identities = 122/152 (80%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 457 ggtgctggtgtttctatacatggaaggtttcgggttgccacggagaacacggtttttgca 516 ||||||||||| || || ||||| | ||||| |||| || ||||||||||||||||| Sbjct: 346 ggtgctggtgtctccatccatggtcgatttcgcattgcaactgagaacacggtttttgcc 405 Query: 517 atgccagaaacagcactgggactcttcccagatataggggcttcttattttctttctaga 576 ||||| || ||| | ||||| ||||| |||||| |||| || || ||||| || || | Sbjct: 406 atgccggagacatctctggggctctttccagatgtaggcgcctcctatttcctgtcacgg 465 Query: 577 ctaccctgggttctatggagagtatgttggcc 608 || |||||| || | ||||||||||||||||| Sbjct: 466 ct-ccctggattttttggagagtatgttggcc 496
>gb|BT011751.1| Arabidopsis thaliana At2g30660 gene, complete cds Length = 1137 Score = 56.0 bits (28), Expect = 1e-04 Identities = 122/152 (80%), Gaps = 1/152 (0%) Strand = Plus / Plus Query: 457 ggtgctggtgtttctatacatggaaggtttcgggttgccacggagaacacggtttttgca 516 ||||||||||| || || ||||| | ||||| |||| || ||||||||||||||||| Sbjct: 346 ggtgctggtgtctccatccatggtcgatttcgcattgcaactgagaacacggtttttgcc 405 Query: 517 atgccagaaacagcactgggactcttcccagatataggggcttcttattttctttctaga 576 ||||| || ||| | ||||| ||||| |||||| |||| || || ||||| || || | Sbjct: 406 atgccggagacatctctggggctctttccagatgtaggcgcctcctatttcctgtcacgg 465 Query: 577 ctaccctgggttctatggagagtatgttggcc 608 || |||||| || | ||||||||||||||||| Sbjct: 466 ct-ccctggattttttggagagtatgttggcc 496
>gb|BT000956.1| Arabidopsis thaliana clone C105271 putative 3-hydroxyisobutyryl-coenzyme A hydrolase (At5g65940) mRNA, complete cds Length = 1168 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 499 gagaacacggtttttgcaatgccagaaacagcactgggactcttcccagatatagg 554 ||||||||||||||||| ||||| || ||||| ||||| ||||| |||||| |||| Sbjct: 400 gagaacacggtttttgccatgcctgagacagctctggggctctttccagatgtagg 455
>gb|AY080759.1| Arabidopsis thaliana At5g65940 mRNA sequence Length = 1385 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 499 gagaacacggtttttgcaatgccagaaacagcactgggactcttcccagatatagg 554 ||||||||||||||||| ||||| || ||||| ||||| ||||| |||||| |||| Sbjct: 397 gagaacacggtttttgccatgcctgagacagctctggggctctttccagatgtagg 452
>gb|AF276301.1|AF276301 Arabidopsis thaliana CoA-thioester hydrolase CHY1 mRNA, complete cds; nuclear gene for peroxisomal product Length = 1180 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 499 gagaacacggtttttgcaatgccagaaacagcactgggactcttcccagatatagg 554 ||||||||||||||||| ||||| || ||||| ||||| ||||| |||||| |||| Sbjct: 428 gagaacacggtttttgccatgcctgagacagctctggggctctttccagatgtagg 483
>emb|BX832408.1|CNS0A0ZW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZF11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1532 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 499 gagaacacggtttttgcaatgccagaaacagcactgggactcttcccagatatagg 554 ||||||||||||||||| ||||| || ||||| ||||| ||||| |||||| |||| Sbjct: 514 gagaacacggtttttgccatgcctgagacagctctggggctctttccagatgtagg 569
>emb|BX831141.1|CNS0A0TS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS60ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 933 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 499 gagaacacggtttttgcaatgccagaaacagcactgggactcttcccagatatagg 554 ||||||||||||||||| ||||| || ||||| ||||| ||||| |||||| |||| Sbjct: 72 gagaacacggtttttgccatgcctgagacagctctggggctctttccagatgtagg 127
>emb|BX830964.1|CNS0A0SW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS42ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1315 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 499 gagaacacggtttttgcaatgccagaaacagcactgggactcttcccagatatagg 554 ||||||||||||||||| ||||| || ||||| ||||| ||||| |||||| |||| Sbjct: 363 gagaacacggtttttgccatgcctgagacagctctggggctctttccagatgtagg 418
>ref|NM_171127.2| Caenorhabditis elegans F09F7.4b (F09F7.4) mRNA, complete cds Length = 1165 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 514 gcaatgccagaaacagcactgggactcttcccaga 548 |||||||||||||| ||||| |||||||||||||| Sbjct: 509 gcaatgccagaaaccgcacttggactcttcccaga 543
>ref|NM_171126.2| Caenorhabditis elegans F09F7.4a (F09F7.4) mRNA, complete cds Length = 1408 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 514 gcaatgccagaaacagcactgggactcttcccaga 548 |||||||||||||| ||||| |||||||||||||| Sbjct: 511 gcaatgccagaaaccgcacttggactcttcccaga 545
>gb|U00050.1| Caenorhabditis elegans cosmid F09F7, complete sequence Length = 32202 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 514 gcaatgccagaaacagcactgggactcttcccaga 548 |||||||||||||| ||||| |||||||||||||| Sbjct: 9540 gcaatgccagaaaccgcacttggactcttcccaga 9574
>ref|NM_001031243.1| Gallus gallus 3-hydroxyisobutyryl-Coenzyme A hydrolase (HIBCH), mRNA Length = 2946 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 508 gtttttgcaatgccagaaacagca 531 |||||||||||||||||||||||| Sbjct: 525 gtttttgcaatgccagaaacagca 548
>emb|AJ720574.1| Gallus gallus mRNA for hypothetical protein, clone 20j11 Length = 2946 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 508 gtttttgcaatgccagaaacagca 531 |||||||||||||||||||||||| Sbjct: 525 gtttttgcaatgccagaaacagca 548
>gb|AC093006.4| Homo sapiens 3 BAC RP11-394D14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 215577 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 451 ggtggaggtgctggtgtttctataca 476 ||||||||||||||||||||| |||| Sbjct: 105188 ggtggaggtgctggtgtttctgtaca 105213
>gb|AC152456.1| Pan troglodytes chromosome X clone PTB-055J03 map human ortholog q25, complete sequence Length = 142891 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 390 gaactatatcattgcaactta 410 ||||||||||||||||||||| Sbjct: 27214 gaactatatcattgcaactta 27234
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 ggcatcaccggcgagcagcga 119 ||||||||||||||||||||| Sbjct: 1995401 ggcatcaccggcgagcagcga 1995421
>ref|XM_843596.1| PREDICTED: Canis familiaris similar to 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 (LOC607040), mRNA Length = 1220 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 509 tttttgcaatgccagaaacagcactgggactcttccc 545 ||||||| ||||||||||||||| | ||||| ||||| Sbjct: 410 tttttgcgatgccagaaacagcaataggactattccc 446
>gb|AC079061.8| Homo sapiens chromosome 8, clone RP11-422N16, complete sequence Length = 202392 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 225 gaaatgtttcacttcttatga 245 ||||||||||||||||||||| Sbjct: 63480 gaaatgtttcacttcttatga 63460
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 cgaccaggtactggtggaagc 143 ||||||||||||||||||||| Sbjct: 6627939 cgaccaggtactggtggaagc 6627959
>gb|AC135960.14| Pan troglodytes clone rp43-55o12, complete sequence Length = 157430 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 cgcaggaggtgatgttgctga 320 ||||||||||||||||||||| Sbjct: 40133 cgcaggaggtgatgttgctga 40113
>gb|AC040172.5| Homo sapiens chromosome 16 clone RP11-60I4, complete sequence Length = 145003 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 aataatgatagctggaaatat 357 ||||||||||||||||||||| Sbjct: 63831 aataatgatagctggaaatat 63851
>gb|AC000068.2| Homo sapiens Chromosome 22q11.2 Cosmid Clone 102g9 In DGCR Region, complete sequence Length = 43934 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 300 cgcaggaggtgatgttgctga 320 ||||||||||||||||||||| Sbjct: 26863 cgcaggaggtgatgttgctga 26843
>ref|XM_396249.2| PREDICTED: Apis mellifera similar to CG5044-PA, isoform A (LOC412796), mRNA Length = 1702 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 tttgcaatgccagaaacagca 531 ||||||||||||||||||||| Sbjct: 730 tttgcaatgccagaaacagca 750
>gb|AC009147.9| Homo sapiens chromosome 16 clone RP11-55H18, complete sequence Length = 163719 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 aataatgatagctggaaatat 357 ||||||||||||||||||||| Sbjct: 106279 aataatgatagctggaaatat 106259
>dbj|AP004292.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1590E11 Length = 158466 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 gaaatgtttcacttcttatga 245 ||||||||||||||||||||| Sbjct: 122024 gaaatgtttcacttcttatga 122044
>dbj|AP004281.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1157A1 Length = 138830 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 225 gaaatgtttcacttcttatga 245 ||||||||||||||||||||| Sbjct: 22685 gaaatgtttcacttcttatga 22705
>gb|AF398930.1| Homo sapiens CLCN6 (CLCN6) gene, partial cds; and methylenetetrahydrofolate reductase (MTHFR) gene, partial cds, alternatively spliced Length = 11154 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 aatgatagctggaaatatggtgct 363 ||||||| |||||||||||||||| Sbjct: 961 aatgatacctggaaatatggtgct 938
>gb|AC006610.1| Caenorhabditis elegans cosmid C30F12, complete sequence Length = 45867 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 557 cttcttattttctttctaga 576 |||||||||||||||||||| Sbjct: 4868 cttcttattttctttctaga 4849
>ref|XM_361538.1| Magnaporthe grisea 70-15 hypothetical protein (MG04012.4) partial mRNA Length = 1428 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 ttttgcgcaggaggtgatgt 314 |||||||||||||||||||| Sbjct: 262 ttttgcgcaggaggtgatgt 281
>ref|XM_615997.2| PREDICTED: Bos taurus similar to 3-hydroxyisobutyryl-Coenzyme A hydrolase isoform 1 (LOC535883), mRNA Length = 1420 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 508 gtttttgcaatgccagaaacagca 531 |||||||| ||||||||||||||| Sbjct: 529 gtttttgcgatgccagaaacagca 552
>gb|BC113274.1| Bos taurus 3-hydroxyisobutyryl-Coenzyme A hydrolase, mRNA (cDNA clone MGC:137758 IMAGE:8082460), complete cds Length = 1471 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 508 gtttttgcaatgccagaaacagca 531 |||||||| ||||||||||||||| Sbjct: 549 gtttttgcgatgccagaaacagca 572
>gb|AY815607.1| Schistosoma japonicum SJCHGC06345 protein mRNA, complete cds Length = 1780 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tgaactatatcattgcaact 408 |||||||||||||||||||| Sbjct: 1300 tgaactatatcattgcaact 1281
>gb|AC129295.4| Mus musculus BAC clone RP24-560M23 from chromosome 1, complete sequence Length = 121538 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 taaactattgattgtcaagg 280 |||||||||||||||||||| Sbjct: 83832 taaactattgattgtcaagg 83813
>emb|AL953897.6| Human DNA sequence from clone RP11-56N19 on chromosome 1 Contains the 3' end of a novel gene, the AGTRAP gene for angiotensin II receptor-associated protein, two novel genes, the MTHFR gene for 5,10-methylenetetrahydrofolate reductase (NADPH), the 5' end of the CLCN6 gene for chloride channel 6 and a CpG island, complete sequence Length = 102509 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 aatgatagctggaaatatggtgct 363 ||||||| |||||||||||||||| Sbjct: 98753 aatgatacctggaaatatggtgct 98776
>emb|AL591925.11| Human DNA sequence from clone RP13-453C5 on chromosome 13, complete sequence Length = 21298 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 330 atctataaataatgatagct 349 |||||||||||||||||||| Sbjct: 16375 atctataaataatgatagct 16394
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ggtggcgtccaactccttcc 20 |||||||||||||||||||| Sbjct: 2922740 ggtggcgtccaactccttcc 2922721
>emb|BX510918.13| Zebrafish DNA sequence from clone CH211-249O9 in linkage group 5, complete sequence Length = 199447 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 atagcaaaccacaggtttct 429 |||||||||||||||||||| Sbjct: 182629 atagcaaaccacaggtttct 182648
>gb|AF410153.1| Swinepox virus isolate 17077-99, complete genome Length = 146454 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 aatctataaataatgatagc 348 |||||||||||||||||||| Sbjct: 15763 aatctataaataatgatagc 15744
>gb|AF257666.1|F257661S06 Bos taurus bovine growth hormone-releasing hormone receptor (GHRH-R) gene, exon 6 Length = 456 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 agtcatgggtggaggtgctggtgt 467 |||||||||||| ||||||||||| Sbjct: 139 agtcatgggtgggggtgctggtgt 162
>gb|AC157660.2| Mus musculus BAC clone RP23-263I16 from chromosome 1, complete sequence Length = 192026 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 taaactattgattgtcaagg 280 |||||||||||||||||||| Sbjct: 16220 taaactattgattgtcaagg 16239
>gb|AC010663.6| Drosophila melanogaster 3L BAC RP98-17M18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 193914 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 aacacggtttttgcaatgccagaa 525 ||||||||||||||| |||||||| Sbjct: 84127 aacacggtttttgcagtgccagaa 84104
>gb|AC125492.1| Homo sapiens 12 BAC RP11-416G10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 105400 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 407 cttatagcaaaccacaggtt 426 |||||||||||||||||||| Sbjct: 74196 cttatagcaaaccacaggtt 74215
>ref|XM_552425.1| Anopheles gambiae str. PEST ENSANGP00000029203 (ENSANGG00000023067), partial mRNA Length = 210 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ccgtactgaatttctgttga 391 |||||||||||||||||||| Sbjct: 198 ccgtactgaatttctgttga 179
>gb|AE002786.2| Drosophila melanogaster chromosome 3L, section 81 of 83 of the complete sequence Length = 100825 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 aacacggtttttgcaatgccagaa 525 ||||||||||||||| |||||||| Sbjct: 4107 aacacggtttttgcagtgccagaa 4084
>gb|AC117700.22| Mus musculus chromosome 15, clone RP23-455J20, complete sequence Length = 187994 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 aagggaaatggaagagcatt 296 |||||||||||||||||||| Sbjct: 128502 aagggaaatggaagagcatt 128521
>gb|CP000206.1| Drosophila melanogaster genomic scaffold 211000022280664 Length = 169021 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 aacacggtttttgcaatgccagaa 525 ||||||||||||||| |||||||| Sbjct: 142747 aacacggtttttgcagtgccagaa 142724
>gb|CP000201.1| Drosophila melanogaster genomic scaffold 211000022280746 Length = 237751 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 aacacggtttttgcaatgccagaa 525 ||||||||||||||| |||||||| Sbjct: 210214 aacacggtttttgcagtgccagaa 210191
>gb|CP000200.1| Drosophila melanogaster genomic scaffold 211000022280753 Length = 68415 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 502 aacacggtttttgcaatgccagaa 525 ||||||||||||||| |||||||| Sbjct: 31465 aacacggtttttgcagtgccagaa 31488
>gb|CP000194.1| Drosophila melanogaster genomic scaffold 211000022280737 Length = 77432 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 aacacggtttttgcaatgccagaa 525 ||||||||||||||| |||||||| Sbjct: 72979 aacacggtttttgcagtgccagaa 72956
>gb|CP000181.1| Drosophila melanogaster genomic scaffold 211000022280332 Length = 60619 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 aacacggtttttgcaatgccagaa 525 ||||||||||||||| |||||||| Sbjct: 19219 aacacggtttttgcagtgccagaa 19196
>gb|AC148982.4| Mus musculus BAC clone RP23-174I22 from 1, complete sequence Length = 195580 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 taaactattgattgtcaagg 280 |||||||||||||||||||| Sbjct: 181232 taaactattgattgtcaagg 181251
>gb|AC162461.6| Mus musculus chromosome 5, clone RP23-265I19, complete sequence Length = 233632 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cactgggactcttcccagat 549 |||||||||||||||||||| Sbjct: 85282 cactgggactcttcccagat 85263 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,046,600 Number of Sequences: 3902068 Number of extensions: 6046600 Number of successful extensions: 121596 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121310 Number of HSP's gapped (non-prelim): 268 length of query: 608 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 585 effective length of database: 17,143,297,704 effective search space: 10028829156840 effective search space used: 10028829156840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)