ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal30b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CR... 36 0.055
2CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CR... 36 0.055
3TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (S... 31 1.8
4GP110_MOUSE (Q8VEC3) G-protein coupled receptor 110 precursor 31 2.3
5YDB4_SCHPO (Q10357) Hypothetical protein C22E12.04 in chromosome I 30 2.5
6YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor 30 3.0
7SP96_DICDI (P14328) Spore coat protein SP96 30 3.0
8RSP5_YEAST (P39940) E3 ubiquitin--protein ligase RSP5 (EC 6.3.2.-) 30 3.0
9IF37_ARATH (P56820) Eukaryotic translation initiation factor 3 s... 30 3.9
10Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1 30 3.9
11LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late en... 30 5.1
12LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late en... 30 5.1
13BUR2_YEAST (Q05949) Protein BUR2 (Bypass UAS requirement protein... 30 5.1
14YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in... 29 8.7
15LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late en... 29 8.7
16DOF14_ARATH (Q9FZA4) Hypothetical Dof zinc finger protein DOF1.4... 29 8.7

>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)|
          Length = 508

 Score = 36.2 bits (82), Expect = 0.055
 Identities = 23/66 (34%), Positives = 27/66 (40%)
 Frame = -2

Query: 199 YPHQPSHQCHVLAPQKLLS*TRWRGTRWQYHHQTQPHAHPCSHRWSVSPPLCTAG*LCHV 20
           YPHQ  H  H   PQ        +     +H  +  HAHP  H+ S  PPL T G    V
Sbjct: 290 YPHQHQHPAHHPHPQP-----HHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHT-GNQAQV 343

Query: 19  HPPQNQ 2
            P   Q
Sbjct: 344 SPATQQ 349



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>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)|
           (Fragment)
          Length = 353

 Score = 36.2 bits (82), Expect = 0.055
 Identities = 23/66 (34%), Positives = 27/66 (40%)
 Frame = -2

Query: 199 YPHQPSHQCHVLAPQKLLS*TRWRGTRWQYHHQTQPHAHPCSHRWSVSPPLCTAG*LCHV 20
           YPHQ  H  H   PQ        +     +H  +  HAHP  H+ S  PPL T G    V
Sbjct: 135 YPHQHQHPAHHPHPQP-----HHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHT-GNQAQV 188

Query: 19  HPPQNQ 2
            P   Q
Sbjct: 189 SPATQQ 194



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>TIR1_YEAST (P10863) Cold shock-induced protein TIR1 precursor (Serine-rich|
           protein 1)
          Length = 254

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 27/104 (25%), Positives = 45/104 (43%)
 Frame = -1

Query: 320 AINGS*WSAPAPHHAVPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLL 141
           ++NG   S+ AP  +    +    +S  +P       +++  SS+ A  P +   K+S  
Sbjct: 108 SLNGDASSSAAPSSSAAPTSSAAPSSSAAPTSSAASSSSEAKSSSAA--PSSSEAKSS-- 163

Query: 140 NSVARHSMAISSPNAAARPSLFSSMVSKPSSVYCRVIMSCSSST 9
            S A  S    S +AA   S   S  + PSS   ++  +  SST
Sbjct: 164 -SAAPSSSEAKSSSAAPSSSEAKSSSAAPSSTEAKITSAAPSST 206



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>GP110_MOUSE (Q8VEC3) G-protein coupled receptor 110 precursor|
          Length = 908

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
 Frame = +3

Query: 327 PPACYSRQGSCCTLRKG---GCCCSL*SAMQSSQFCHRS*SAELWSNIYAQE 473
           PP+C   Q +CC    G    C CSL    QS  FC R   A++W      E
Sbjct: 112 PPSCLDPQ-NCCLHTTGPVPSCNCSLRGLRQSVNFCER---AKVWGTFEIDE 159



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>YDB4_SCHPO (Q10357) Hypothetical protein C22E12.04 in chromosome I|
          Length = 297

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +3

Query: 258 SIHEGNSMVWCWCGPLRAIDRHRPPACYSRQGSCCTLRKGGCC 386
           S++EG+S     C    +    +P  C   + SCC+ +K  CC
Sbjct: 218 SVNEGSSC----CSKKDSSPSEKPSCCSQEKKSCCSSKKPSCC 256



 Score = 28.1 bits (61), Expect(2) = 2.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 318 RHRPPACYSRQGSCCTLRKGGCC 386
           + +   C S++ SCC+  K GCC
Sbjct: 242 QEKKSCCSSKKPSCCSQEKKGCC 264



 Score = 21.2 bits (43), Expect(2) = 2.5
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +2

Query: 149 KFLWCKHMALMRWLMRITACSSSRTSLEEKSVMC 250
           K LW +H  L       + CS   +S  EK   C
Sbjct: 207 KSLWTEHAELKSVNEGSSCCSKKDSSPSEKPSCC 240



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>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor|
          Length = 374

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 21/67 (31%), Positives = 37/67 (55%)
 Frame = -1

Query: 248 TSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPNAAARPSLFSS 69
           +S +S        ++  SSS+ +SVP   +T +S  +S    S + SS ++++RPS  SS
Sbjct: 184 SSSSSSSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSS----SSSSSSSSSSSRPSSSSS 239

Query: 68  MVSKPSS 48
            ++  SS
Sbjct: 240 FITTMSS 246



 Score = 29.3 bits (64), Expect = 6.7
 Identities = 23/79 (29%), Positives = 39/79 (49%)
 Frame = -1

Query: 248 TSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPNAAARPSLFSS 69
           +S +SP        T  SSS+ +S   + ++ +S  +S +  S + SS ++++  S  SS
Sbjct: 139 SSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 198

Query: 68  MVSKPSSVYCRVIMSCSSS 12
             S  SS    +  S SSS
Sbjct: 199 SSSSSSSSSVPITSSTSSS 217



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>SP96_DICDI (P14328) Spore coat protein SP96|
          Length = 600

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
 Frame = -1

Query: 248 TSQTSPLGRCGRKNTQ----LSSSTIASVPCACTTKTSLLNSVARHSMAISSPN---AAA 90
           TS +S LG     +      +SSS   S   + +  +S  +S    S A SSP+   A++
Sbjct: 426 TSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSAASS 485

Query: 89  RPSLFSSMVSKPSSVYCRVIMSCSSSTEP 3
            PS  +S  S PSS       S SSS+ P
Sbjct: 486 SPSSSASSSSSPSS-------SASSSSAP 507



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>RSP5_YEAST (P39940) E3 ubiquitin--protein ligase RSP5 (EC 6.3.2.-)|
          Length = 809

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = -3

Query: 477 SPLGHRCCSTTRHSSSGDKIGSTASPTKDYNNNHPS 370
           +P GH   S+T  SS+    G + S T++++ +HPS
Sbjct: 147 APSGHTASSSTNTSSTTRTNGHSTSSTRNHSTSHPS 182



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>IF37_ARATH (P56820) Eukaryotic translation initiation factor 3 subunit 7|
           (eIF-3 zeta) (eIF3d) (p66)
          Length = 591

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 22/79 (27%), Positives = 40/79 (50%)
 Frame = -1

Query: 278 AVPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHSMAISSPN 99
           AVPF +   G    S +       +  +++ + +VP A  +++  L  VA  +  +S+P 
Sbjct: 10  AVPFNSDGWGPPDASDVSSSASPTSVAAANLLPNVPFASFSRSDKLGRVADWTRNLSNP- 68

Query: 98  AAARPSLFSSMVSKPSSVY 42
            +ARP+  S   S PS+V+
Sbjct: 69  -SARPNTGSK--SDPSAVF 84



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>Y34F_DROME (Q9W5D0) Hypothetical protein CG12467 in chromosome 1|
          Length = 1561

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 28/84 (33%), Positives = 38/84 (45%)
 Frame = -1

Query: 299 SAPAPHHAVPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHS 120
           S+    HAV   +    +S T         NT+ S+S  AS P   + KTS   S A+ S
Sbjct: 463 SSDGEDHAVMLTHHSHNSSSTD--------NTETSTSGSASSPSK-SLKTSSSLSPAKRS 513

Query: 119 MAISSPNAAARPSLFSSMVSKPSS 48
            + S  NA AR  + S   + PSS
Sbjct: 514 GSESPKNAKARVHIQSRTSTTPSS 537



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>LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late envelope protein|
           3)
          Length = 118

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 333 ACYSRQGSCCTLRKGGCCCSL*SAMQSSQFCHR 431
           +C S  G CC+   GGCC S     +    CHR
Sbjct: 59  SCGSSSGGCCSSGGGGCCLS--HHRRRRSHCHR 89



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>LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late envelope protein|
           2) (Small proline-rich-like epidermal differentiation
           complex protein 2A)
          Length = 118

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 333 ACYSRQGSCCTLRKGGCCCSL*SAMQSSQFCHR 431
           +C S  G CC+   GGCC S     +    CHR
Sbjct: 59  SCGSSSGGCCSSGGGGCCLS--HHRRRRSHCHR 89



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>BUR2_YEAST (Q05949) Protein BUR2 (Bypass UAS requirement protein 2)|
           (Chromosome stability protein 4)
          Length = 395

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = -3

Query: 438 SSSGD--KIGSTASPTKDYNNNHPSSKYNSCLVWSNMLEDGGDQWL 307
           SSSGD  K  +   PT + +    SS +N+  +W +++E   +QW+
Sbjct: 5   SSSGDVKKFQAVPKPTSNASPPPASSGFNARTLWPDLIETPENQWV 50



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>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
 Frame = -1

Query: 275 VPFMNRKMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSVARHSMAIS-SPN 99
           +P  +  M +S ++        ++ LSSS+  S P + +  TSL++S ++ S + S S  
Sbjct: 41  IPSSSSSMLSSSSATAISSSSSSSPLSSSSFTS-PASSSFITSLVSSSSQQSSSSSASLT 99

Query: 98  AAARPSLFSSMVSKPSSVYCRVIMSCSSST 9
           +++  +L SS  + P+S      +S SSS+
Sbjct: 100 SSSSATLTSSSSASPTSSSSSHALSSSSSS 129



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>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein|
           18) (Small proline-rich-like epidermal differentiation
           complex protein 5A)
          Length = 118

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 336 CYSRQGSCCTLRKGGCCCS 392
           C S  G CC+   GGCC S
Sbjct: 52  CGSSSGGCCSSEGGGCCLS 70



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>DOF14_ARATH (Q9FZA4) Hypothetical Dof zinc finger protein DOF1.4 (AtDOF1.4)|
          Length = 311

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
 Frame = -1

Query: 302 WSAPAPHHAVPFMNR---KMGTSQTSPLGRCGRKNTQLSSSTIASVPCACTTKTSLLNSV 132
           +S   P H      R   + GT +  P+G   RKN ++   + A+   A T  T+  NS 
Sbjct: 45  YSLSQPRHFCKACKRYWTRGGTLRNVPVGGSYRKNKRVKRPSTATTTTASTVSTT--NS- 101

Query: 131 ARHSMAISSPNAAARPSLFSSMVSKP 54
                  SSPN   + S FSSM   P
Sbjct: 102 -------SSPNNPHQISHFSSMNHHP 120


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,720,770
Number of Sequences: 219361
Number of extensions: 1675542
Number of successful extensions: 5148
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5134
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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