| Clone Name | baal30b10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_183451.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1771 Score = 402 bits (203), Expect = e-109 Identities = 311/347 (89%) Strand = Plus / Plus Query: 26 acataatcaccctgcagtacacagaggagggcttactgaccatcgatgagaacagggatg 85 |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 782 acataatcactctgcagtacacagaggaaggcttactgaccatcgatgagaaccgggatg 841 Query: 86 ggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctcgccaccgagttcaaga 145 | | ||| || || ||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 842 gccatgctgcagcttttggtgatgatattgctatcgagtgcctggcaaccgagttcaaga 901 Query: 146 gagaagtttttgtggtgcaagcacatggcactgatgcgatggttgatgaggataactgcg 205 ||||||||| |||||||||||||||||| | ||||| |||||||||||||| ||||| | Sbjct: 902 gagaagtttatgtggtgcaagcacatggagcggatgcaatggttgatgaggacaactgtg 961 Query: 206 tgttcttcctcccgcacctccctagaggagaagtctgtgatgtgcccatctttctattca 265 |||||||||| || |||| ||||||||||||| | || || ||| || ||||| |||| Sbjct: 962 tgttcttcctaccacaccgccctagaggagaaatttgcgagccgccgatttttcttttca 1021 Query: 266 tgaagggaacagcatggtgtggtgctggtgcggaccattacgagccattgatcgccaccg 325 ||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| | Sbjct: 1022 tgaagggaacagcatggtgtggtgctggtgccgaccattatgagcctttgatagccactg 1081 Query: 326 tcctccagcatgttactccagacaaggcagctgttgtactttgagga 372 |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1082 tcctccagaatgttactccagacaaggcagctgttgtactttgagga 1128 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 404 gatgcagtcgagccaattttgtcaccggagctagagtgccgagttgtggagcaacatcta 463 |||| ||||||||||||||||| | | |||||||| ||| ||| |||||||| |||| Sbjct: 1167 gatggagtcgagccaattttgtaatctgagctagattgctttattgaggagcaacgtcta 1226 Query: 464 tgcccaagagga 475 |||||||||||| Sbjct: 1227 tgcccaagagga 1238
>dbj|AK100002.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135E13, full insert sequence Length = 1771 Score = 402 bits (203), Expect = e-109 Identities = 311/347 (89%) Strand = Plus / Plus Query: 26 acataatcaccctgcagtacacagaggagggcttactgaccatcgatgagaacagggatg 85 |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 782 acataatcactctgcagtacacagaggaaggcttactgaccatcgatgagaaccgggatg 841 Query: 86 ggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctcgccaccgagttcaaga 145 | | ||| || || ||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 842 gccatgctgcagcttttggtgatgatattgctatcgagtgcctggcaaccgagttcaaga 901 Query: 146 gagaagtttttgtggtgcaagcacatggcactgatgcgatggttgatgaggataactgcg 205 ||||||||| |||||||||||||||||| | ||||| |||||||||||||| ||||| | Sbjct: 902 gagaagtttatgtggtgcaagcacatggagcggatgcaatggttgatgaggacaactgtg 961 Query: 206 tgttcttcctcccgcacctccctagaggagaagtctgtgatgtgcccatctttctattca 265 |||||||||| || |||| ||||||||||||| | || || ||| || ||||| |||| Sbjct: 962 tgttcttcctaccacaccgccctagaggagaaatttgcgagccgccgatttttcttttca 1021 Query: 266 tgaagggaacagcatggtgtggtgctggtgcggaccattacgagccattgatcgccaccg 325 ||||||||||||||||||||||||||||||| |||||||| ||||| ||||| ||||| | Sbjct: 1022 tgaagggaacagcatggtgtggtgctggtgccgaccattatgagcctttgatagccactg 1081 Query: 326 tcctccagcatgttactccagacaaggcagctgttgtactttgagga 372 |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1082 tcctccagaatgttactccagacaaggcagctgttgtactttgagga 1128 Score = 48.1 bits (24), Expect = 0.029 Identities = 60/72 (83%) Strand = Plus / Plus Query: 404 gatgcagtcgagccaattttgtcaccggagctagagtgccgagttgtggagcaacatcta 463 |||| ||||||||||||||||| | | |||||||| ||| ||| |||||||| |||| Sbjct: 1167 gatggagtcgagccaattttgtaatctgagctagattgctttattgaggagcaacgtcta 1226 Query: 464 tgcccaagagga 475 |||| ||||||| Sbjct: 1227 tgccaaagagga 1238
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 26 acataatcaccctgcagtacacagaggagggcttactgaccatcgatgagaacagggatg 85 |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 142298 acataatcactctgcagtacacagaggaaggcttactgaccatcgatgagaaccgggatg 142357 Query: 86 ggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctcgccaccgagttcaaga 145 | | ||| || || ||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 142358 gccatgctgcagcttttggtgatgatattgctatcgagtgcctggcaaccgagttcaaga 142417 Query: 146 gagaagtttttgtggt 161 ||||||||| |||||| Sbjct: 142418 gagaagtttatgtggt 142433 Score = 147 bits (74), Expect = 4e-32 Identities = 92/98 (93%) Strand = Plus / Plus Query: 275 cagcatggtgtggtgctggtgcggaccattacgagccattgatcgccaccgtcctccagc 334 |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||| Sbjct: 142814 cagcatggtgtggtgctggtgccgaccattatgagcctttgatagccactgtcctccaga 142873 Query: 335 atgttactccagacaaggcagctgttgtactttgagga 372 |||||||||||||||||||||||||||||||||||||| Sbjct: 142874 atgttactccagacaaggcagctgttgtactttgagga 142911 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 159 ggtgcaagcacatggcactgatgcgatggttgatgaggataactgcgtgttcttcctccc 218 ||||||||||||||| | ||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 142562 ggtgcaagcacatggagcggatgcaatggttgatgaggacaactgtgtgttcttcctacc 142621 Query: 219 gcacctccctagaggagaagtctgtgatgtgcccatctttctattcatgaagggaacag 277 |||| ||||||||||||| | || || ||| || ||||| |||||||||||||||| Sbjct: 142622 acaccgccctagaggagaaatttgcgagccgccgatttttcttttcatgaagggaacag 142680 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 404 gatgcagtcgagccaattttgtcaccggagctagagtgccgagttgtggagcaacatcta 463 |||| ||||||||||||||||| | | |||||||| ||| ||| |||||||| |||| Sbjct: 142950 gatggagtcgagccaattttgtaatctgagctagattgctttattgaggagcaacgtcta 143009 Query: 464 tgcccaagagga 475 |||||||||||| Sbjct: 143010 tgcccaagagga 143021
>dbj|AP003727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0672D08 Length = 173729 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 26 acataatcaccctgcagtacacagaggagggcttactgaccatcgatgagaacagggatg 85 |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 140100 acataatcactctgcagtacacagaggaaggcttactgaccatcgatgagaaccgggatg 140159 Query: 86 ggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctcgccaccgagttcaaga 145 | | ||| || || ||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 140160 gccatgctgcagcttttggtgatgatattgctatcgagtgcctggcaaccgagttcaaga 140219 Query: 146 gagaagtttttgtggt 161 ||||||||| |||||| Sbjct: 140220 gagaagtttatgtggt 140235 Score = 147 bits (74), Expect = 4e-32 Identities = 92/98 (93%) Strand = Plus / Plus Query: 275 cagcatggtgtggtgctggtgcggaccattacgagccattgatcgccaccgtcctccagc 334 |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||| Sbjct: 140616 cagcatggtgtggtgctggtgccgaccattatgagcctttgatagccactgtcctccaga 140675 Query: 335 atgttactccagacaaggcagctgttgtactttgagga 372 |||||||||||||||||||||||||||||||||||||| Sbjct: 140676 atgttactccagacaaggcagctgttgtactttgagga 140713 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 159 ggtgcaagcacatggcactgatgcgatggttgatgaggataactgcgtgttcttcctccc 218 ||||||||||||||| | ||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 140364 ggtgcaagcacatggagcggatgcaatggttgatgaggacaactgtgtgttcttcctacc 140423 Query: 219 gcacctccctagaggagaagtctgtgatgtgcccatctttctattcatgaagggaacag 277 |||| ||||||||||||| | || || ||| || ||||| |||||||||||||||| Sbjct: 140424 acaccgccctagaggagaaatttgcgagccgccgatttttcttttcatgaagggaacag 140482 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 404 gatgcagtcgagccaattttgtcaccggagctagagtgccgagttgtggagcaacatcta 463 |||| ||||||||||||||||| | | |||||||| ||| ||| |||||||| |||| Sbjct: 140752 gatggagtcgagccaattttgtaatctgagctagattgctttattgaggagcaacgtcta 140811 Query: 464 tgcccaagagga 475 |||||||||||| Sbjct: 140812 tgcccaagagga 140823
>dbj|AP002969.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0455C04 Length = 147940 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 26 acataatcaccctgcagtacacagaggagggcttactgaccatcgatgagaacagggatg 85 |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 90844 acataatcactctgcagtacacagaggaaggcttactgaccatcgatgagaaccgggatg 90903 Query: 86 ggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctcgccaccgagttcaaga 145 | | ||| || || ||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 90904 gccatgctgcagcttttggtgatgatattgctatcgagtgcctggcaaccgagttcaaga 90963 Query: 146 gagaagtttttgtggt 161 ||||||||| |||||| Sbjct: 90964 gagaagtttatgtggt 90979 Score = 147 bits (74), Expect = 4e-32 Identities = 92/98 (93%) Strand = Plus / Plus Query: 275 cagcatggtgtggtgctggtgcggaccattacgagccattgatcgccaccgtcctccagc 334 |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||| Sbjct: 91360 cagcatggtgtggtgctggtgccgaccattatgagcctttgatagccactgtcctccaga 91419 Query: 335 atgttactccagacaaggcagctgttgtactttgagga 372 |||||||||||||||||||||||||||||||||||||| Sbjct: 91420 atgttactccagacaaggcagctgttgtactttgagga 91457 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 159 ggtgcaagcacatggcactgatgcgatggttgatgaggataactgcgtgttcttcctccc 218 ||||||||||||||| | ||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 91108 ggtgcaagcacatggagcggatgcaatggttgatgaggacaactgtgtgttcttcctacc 91167 Query: 219 gcacctccctagaggagaagtctgtgatgtgcccatctttctattcatgaagggaacag 277 |||| ||||||||||||| | || || ||| || ||||| |||||||||||||||| Sbjct: 91168 acaccgccctagaggagaaatttgcgagccgccgatttttcttttcatgaagggaacag 91226 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 404 gatgcagtcgagccaattttgtcaccggagctagagtgccgagttgtggagcaacatcta 463 |||| ||||||||||||||||| | | |||||||| ||| ||| |||||||| |||| Sbjct: 91496 gatggagtcgagccaattttgtaatctgagctagattgctttattgaggagcaacgtcta 91555 Query: 464 tgcccaagagga 475 |||||||||||| Sbjct: 91556 tgcccaagagga 91567
>dbj|AP003610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0402A09 Length = 141966 Score = 174 bits (88), Expect = 2e-40 Identities = 124/136 (91%) Strand = Plus / Plus Query: 26 acataatcaccctgcagtacacagaggagggcttactgaccatcgatgagaacagggatg 85 |||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 127228 acataatcactctgcagtacacagaggaaggcttactgaccatcgatgagaaccgggatg 127287 Query: 86 ggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctcgccaccgagttcaaga 145 | | ||| || || ||||||||||||||||| ||||||||||| || ||||||||||||| Sbjct: 127288 gccatgctgcagcttttggtgatgatattgctatcgagtgcctggcaaccgagttcaaga 127347 Query: 146 gagaagtttttgtggt 161 ||||||||| |||||| Sbjct: 127348 gagaagtttatgtggt 127363 Score = 147 bits (74), Expect = 4e-32 Identities = 92/98 (93%) Strand = Plus / Plus Query: 275 cagcatggtgtggtgctggtgcggaccattacgagccattgatcgccaccgtcctccagc 334 |||||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||| Sbjct: 127744 cagcatggtgtggtgctggtgccgaccattatgagcctttgatagccactgtcctccaga 127803 Query: 335 atgttactccagacaaggcagctgttgtactttgagga 372 |||||||||||||||||||||||||||||||||||||| Sbjct: 127804 atgttactccagacaaggcagctgttgtactttgagga 127841 Score = 93.7 bits (47), Expect = 5e-16 Identities = 101/119 (84%) Strand = Plus / Plus Query: 159 ggtgcaagcacatggcactgatgcgatggttgatgaggataactgcgtgttcttcctccc 218 ||||||||||||||| | ||||| |||||||||||||| ||||| ||||||||||| || Sbjct: 127492 ggtgcaagcacatggagcggatgcaatggttgatgaggacaactgtgtgttcttcctacc 127551 Query: 219 gcacctccctagaggagaagtctgtgatgtgcccatctttctattcatgaagggaacag 277 |||| ||||||||||||| | || || ||| || ||||| |||||||||||||||| Sbjct: 127552 acaccgccctagaggagaaatttgcgagccgccgatttttcttttcatgaagggaacag 127610 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Plus Query: 404 gatgcagtcgagccaattttgtcaccggagctagagtgccgagttgtggagcaacatcta 463 |||| ||||||||||||||||| | | |||||||| ||| ||| |||||||| |||| Sbjct: 127880 gatggagtcgagccaattttgtaatctgagctagattgctttattgaggagcaacgtcta 127939 Query: 464 tgcccaagagga 475 |||||||||||| Sbjct: 127940 tgcccaagagga 127951
>ref|NM_121313.3| Arabidopsis thaliana unknown protein AT5G13100 mRNA, complete cds Length = 1495 Score = 79.8 bits (40), Expect = 8e-12 Identities = 196/248 (79%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 895 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 954 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 189 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 955 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 1014 Query: 190 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 249 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 1015 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1074 Query: 250 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 309 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 1075 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1134 Query: 310 ccattgat 317 || ||||| Sbjct: 1135 cccttgat 1142
>gb|BT020363.1| Arabidopsis thaliana At5g13100 gene, complete cds Length = 1065 Score = 79.8 bits (40), Expect = 8e-12 Identities = 196/248 (79%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 766 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 825 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 189 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 826 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 885 Query: 190 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 249 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 886 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 945 Query: 250 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 309 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 946 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1005 Query: 310 ccattgat 317 || ||||| Sbjct: 1006 cccttgat 1013
>gb|AY058168.1| Arabidopsis thaliana AT5g13100/T19L5_60 mRNA, complete cds Length = 1479 Score = 79.8 bits (40), Expect = 8e-12 Identities = 196/248 (79%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 879 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 938 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 189 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 939 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 998 Query: 190 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 249 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 999 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1058 Query: 250 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 309 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 1059 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1118 Query: 310 ccattgat 317 || ||||| Sbjct: 1119 cccttgat 1126
>emb|BX830714.1|CNS0A1NX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS17ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1463 Score = 79.8 bits (40), Expect = 8e-12 Identities = 196/248 (79%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 869 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 928 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 189 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 929 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 988 Query: 190 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 249 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 989 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1048 Query: 250 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 309 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 1049 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1108 Query: 310 ccattgat 317 || ||||| Sbjct: 1109 cccttgat 1116
>emb|BX829394.1|CNS0A04Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1421 Score = 79.8 bits (40), Expect = 8e-12 Identities = 196/248 (79%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 862 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 921 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 189 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 922 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 981 Query: 190 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 249 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 982 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1041 Query: 250 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 309 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 1042 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1101 Query: 310 ccattgat 317 || ||||| Sbjct: 1102 cccttgat 1109
>emb|BX829632.1|CNS09ZZI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1360 Score = 79.8 bits (40), Expect = 8e-12 Identities = 196/248 (79%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 825 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 884 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 189 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 885 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 944 Query: 190 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 249 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 945 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1004 Query: 250 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 309 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 1005 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1064 Query: 310 ccattgat 317 || ||||| Sbjct: 1065 cccttgat 1072
>emb|BX830955.1|CNS09ZJC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZE10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1423 Score = 79.8 bits (40), Expect = 8e-12 Identities = 196/248 (79%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 862 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 921 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 189 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 922 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 981 Query: 190 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 249 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 982 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1041 Query: 250 cccatctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgag 309 || |||||||||||||||| || || | |||||||||| ||| || |||||||||||| Sbjct: 1042 ccagtctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgag 1101 Query: 310 ccattgat 317 || ||||| Sbjct: 1102 cccttgat 1109
>emb|BX831736.1|CNS09ZRQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH26ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1374 Score = 77.8 bits (39), Expect = 3e-11 Identities = 117/143 (81%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 815 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatcgcaatcgagtgtcta 874 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 189 ||||| |||||||| ||||| | | |||||||||||| |||||| | |||| |||||| Sbjct: 875 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggctcagatgggatggta 934 Query: 190 gatgaggataactgcgtgttctt 212 || || || ||||| |||||||| Sbjct: 935 gaggaagagaactgtgtgttctt 957 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 254 tctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgagccat 313 |||||||||||||||| || || | |||||||||| ||| || |||||||||||||| | Sbjct: 1000 tctttctattcatgaaaggcactggttggtgtggtggtggagcagaccattacgagccct 1059 Query: 314 tgat 317 |||| Sbjct: 1060 tgat 1063
>emb|BX832255.1|CNS09ZVQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH61ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1415 Score = 73.8 bits (37), Expect = 5e-10 Identities = 197/249 (79%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 852 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 911 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 189 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 912 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 971 Query: 190 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 249 || || || ||||| |||||||| || || ||| || ||| | ||||| ||| || Sbjct: 972 gaggaagagaactgtgtgttctttcttcctcacaaaccaagaagtgaagttcttgaagtc 1031 Query: 250 cccatctttctattcatgaagggaacagcatggt-gtggtgctggtgcggaccattacga 308 || |||||||||||||||| ||||| | |||| |||||| ||| || ||||||||||| Sbjct: 1032 ccagtctttctattcatgaaaggaactggttggtcgtggtggtggagcagaccattacga 1091 Query: 309 gccattgat 317 ||| ||||| Sbjct: 1092 gcccttgat 1100
>emb|BX832168.1|CNS09ZMD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH56ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1366 Score = 73.8 bits (37), Expect = 5e-10 Identities = 197/249 (79%), Gaps = 1/249 (0%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 816 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 875 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 189 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 876 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 935 Query: 190 gatgaggataactgcgtgttcttcctcccgcacctccctagaggagaagtctgtgatgtg 249 || || || ||||| |||||||||| ||| ||| ||| | | | ||||| ||| || Sbjct: 936 gaggaagagaactgtgtgttcttccccccccacaacccaacaagtgaagttcttgaagtc 995 Query: 250 cccatctttctattcatgaagggaacagcatggt-gtggtgctggtgcggaccattacga 308 || |||||||||||||||| || || | |||| |||||| ||| || ||||||||||| Sbjct: 996 ccagtctttctattcatgaaaggcactggttggtcgtggtggtggagcagaccattacga 1055 Query: 309 gccattgat 317 ||| ||||| Sbjct: 1056 gcccttgat 1064
>emb|BX832139.1|CNS09ZOS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH54ZB10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1463 Score = 69.9 bits (35), Expect = 8e-09 Identities = 116/143 (81%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 895 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 954 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 189 ||||| |||||||| ||||| | | |||||||||||| ||||| | |||| |||||| Sbjct: 955 gccactgagttcaaacgagaaatctatgtggtgcaagcgcatggatcagatgggatggta 1014 Query: 190 gatgaggataactgcgtgttctt 212 || || || ||||| |||||||| Sbjct: 1015 gaggaagagaactgtgtgttctt 1037
>gb|AY089155.1| Arabidopsis thaliana clone 39563 mRNA, complete sequence Length = 1396 Score = 67.9 bits (34), Expect = 3e-08 Identities = 118/146 (80%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 823 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 882 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatggcactgatgcgatggtt 189 ||||| |||||||| || || | | |||||||||||| ||||| | |||| |||||| Sbjct: 883 gccactgagttcaaacgaaaaatctatgtggtgcaagcgcatggatcagatgggatggta 942 Query: 190 gatgaggataactgcgtgttcttcct 215 || || || ||||| ||||||||||| Sbjct: 943 gaggaagagaactgtgtgttcttcct 968
>emb|BX832403.1|CNS09ZNV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH70ZE01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1413 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 857 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 916 Query: 130 gccaccgagttcaagagagaagtttttgtggtgcaagcacatgg 173 ||||| |||||||| ||||| | | ||||||| |||| ||||| Sbjct: 917 gccactgagttcaaacgagaaatctatgtggtgaaagcgcatgg 960
>emb|AL391711.1|ATT19L5 Arabidopsis thaliana DNA chromosome 5, BAC clone T19L5 (ESSA project) Length = 82207 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 70 gatgagaacagggatgggcgtgcggctgcgtttggtgatgatattgccatcgagtgcctc 129 ||||||||| | || || ||||| ||||||||||| ||||| || || |||||||| || Sbjct: 31075 gatgagaaccgagaaggacgtgcagctgcgtttggggatgacatagcaatcgagtgtcta 31134 Query: 130 gccaccgagttcaa 143 ||||| |||||||| Sbjct: 31135 gccactgagttcaa 31148 Score = 44.1 bits (22), Expect = 0.45 Identities = 34/38 (89%) Strand = Plus / Plus Query: 280 tggtgtggtgctggtgcggaccattacgagccattgat 317 |||||||||| ||| || |||||||||||||| ||||| Sbjct: 31472 tggtgtggtggtggagcagaccattacgagcccttgat 31509
>emb|BX830344.1|CNS0A07W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB74ZE09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1427 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 254 tctttctattcatgaagggaacagcatggtgtggtgctggtgcggaccattacgagc 310 |||||||||||||||| ||||| | |||||||||| ||| || |||||| |||||| Sbjct: 1048 tctttctattcatgaaaggaactggttggtgtggtggtggagcagaccatcacgagc 1104
>gb|AC141209.11| Mus musculus chromosome 3, clone RP23-199M5, complete sequence Length = 192274 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 271 ggaacagcatggtgtggtgctg 292 |||||||||||||||||||||| Sbjct: 86791 ggaacagcatggtgtggtgctg 86770
>emb|AM075208.1| Enterobacter sakazakii partial genome, BAC clone 10 C 10 Length = 86823 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 gctgcgtttggtgatgatatt 114 ||||||||||||||||||||| Sbjct: 45535 gctgcgtttggtgatgatatt 45555
>emb|CR728004.2|CNS0GOOA Tetraodon nigroviridis full-length cDNA Length = 1404 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 156 tgtggtgcaagcacatggcac 176 ||||||||||||||||||||| Sbjct: 999 tgtggtgcaagcacatggcac 1019
>gb|AY738618.1| Haloferax volcanii DS2 DnaK chaperone system gene cluster, complete sequence; and conserved hypothetical protein gene, complete cds Length = 7680 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 catcgagtgcctcgccaccgagttc 141 ||||||||| ||||||||||||||| Sbjct: 3992 catcgagtggctcgccaccgagttc 4016
>ref|NM_125509.2| Arabidopsis thaliana AACT1; transferase AT5G61160 (AACT1) mRNA, complete cds Length = 1581 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 tctatgcccaagaggagagatggt 483 |||||| ||||||||||||||||| Sbjct: 1306 tctatgtccaagaggagagatggt 1329
>gb|DP000013.1| Otolemur garnettii target 1 genomic scaffold Length = 1743090 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggttctgtggaggatgaa 21 |||||||||||||||||||| Sbjct: 465413 ctggttctgtggaggatgaa 465432
>gb|AC125643.3| Rattus norvegicus 4 BAC CH230-55N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 216677 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ttctattcatgaagggaaca 276 |||||||||||||||||||| Sbjct: 124820 ttctattcatgaagggaaca 124839
>gb|AY813544.1| Schistosoma japonicum SJCHGC05862 protein mRNA, complete cds Length = 1884 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 agaagtctgtgatgtgcccatctt 257 ||||||||||||| |||||||||| Sbjct: 1116 agaagtctgtgatctgcccatctt 1093
>gb|BT011800.1| Arabidopsis thaliana At5g61160 mRNA sequence Length = 1357 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 tctatgcccaagaggagagatggt 483 |||||| ||||||||||||||||| Sbjct: 1246 tctatgtccaagaggagagatggt 1269
>emb|CR376731.13| Zebrafish DNA sequence from clone DKEY-117K10 in linkage group 8, complete sequence Length = 130762 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 468 caagaggagagatggtctgtctaa 491 |||||||||||||| ||||||||| Sbjct: 42888 caagaggagagatgatctgtctaa 42865
>gb|AC114982.2| Homo sapiens chromosome 5 clone RP11-95I19, complete sequence Length = 175079 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ccctagaggagaagtctgtg 244 |||||||||||||||||||| Sbjct: 21944 ccctagaggagaagtctgtg 21925
>gb|AC099466.7| Rattus norvegicus 4 BAC CH230-63I9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227298 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ttctattcatgaagggaaca 276 |||||||||||||||||||| Sbjct: 221761 ttctattcatgaagggaaca 221780
>gb|AY133543.1| Arabidopsis thaliana At5g61160/maf19_160 mRNA, complete cds Length = 1359 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 tctatgcccaagaggagagatggt 483 |||||| ||||||||||||||||| Sbjct: 1249 tctatgtccaagaggagagatggt 1272
>gb|AC091237.6| Mus musculus Strain C57BL7/J Chromosome 14 RP23-470F15, complete sequence Length = 177104 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tctttctattcatgaaggga 273 |||||||||||||||||||| Sbjct: 125045 tctttctattcatgaaggga 125064
>gb|AC008859.5| Homo sapiens chromosome 5 clone CTD-2183N12, complete sequence Length = 120491 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 ccctagaggagaagtctgtg 244 |||||||||||||||||||| Sbjct: 455 ccctagaggagaagtctgtg 474
>gb|AY037199.1| Arabidopsis thaliana AT5g61160/maf19_160 mRNA, complete cds Length = 1562 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 tctatgcccaagaggagagatggt 483 |||||| ||||||||||||||||| Sbjct: 1306 tctatgtccaagaggagagatggt 1329
>gb|AC146881.3| Otolemur garnettii clone CH256-571D18, complete sequence Length = 240447 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 ctggttctgtggaggatgaa 21 |||||||||||||||||||| Sbjct: 142136 ctggttctgtggaggatgaa 142155
>dbj|AB006696.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAF19 Length = 78379 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 460 tctatgcccaagaggagagatggt 483 |||||| ||||||||||||||||| Sbjct: 58966 tctatgtccaagaggagagatggt 58989
>emb|AL831706.19| Mouse DNA sequence from clone RP23-74B12 on chromosome 2, complete sequence Length = 193178 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gtgttcttcctcccgcacctccct 228 |||||||||||||| ||||||||| Sbjct: 180016 gtgttcttcctcccccacctccct 180039 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,707,571 Number of Sequences: 3902068 Number of extensions: 4707571 Number of successful extensions: 83560 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83423 Number of HSP's gapped (non-prelim): 122 length of query: 515 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 492 effective length of database: 17,143,297,704 effective search space: 8434502470368 effective search space used: 8434502470368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)