ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal30b06 |
|---|---|
| Clone Library Name | barley_pub |
>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC| 2.4.1.12) (AtCesA-8) (Irregular xylem protein 1) (AtIRX1) Length = 985 Score = 114 bits (285), Expect = 2e-25 Identities = 84/253 (33%), Positives = 110/253 (43%), Gaps = 49/253 (19%) Frame = +1 Query: 10 KAPXHRHNFQAGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIH 189 K P ++H+ +AGA N L RVSAV+TNAP +LN+DCD + NN + AMC L+ Sbjct: 437 KRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAVREAMCFLMDPVVGQD 496 Query: 190 SGFVQVPQKFYGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPP 369 FVQ PQ+F G K D + N+ V TG RR+ +YG PP Sbjct: 497 VCFVQFPQRFDGIDKSDRYANRNIVFFDVNMRGLDGIQGPVYVGTGTVFRRQALYGYSPP 556 Query: 370 DTVKHETRGSPS-----------------YKE---------------------------- 414 + + S S YK+ Sbjct: 557 SKPRILPQSSSSSCCCLTKKKQPQDPSEIYKDAKREELDAAIFNLGDLDNYDEYDRSMLI 616 Query: 415 ----LQVRFGSSKVLIESSRNIISGDLLARPTVDVSSRIEMAKQVGDCNYEAGTCWGKEI 582 + FG S V IES+ G +V+ S+ I+ A V C YE T WGKEI Sbjct: 617 SQTSFEKTFGLSTVFIESTLMENGG---VPDSVNPSTLIKEAIHVISCGYEEKTEWGKEI 673 Query: 583 GWVYGSMTEDILT 621 GW+YGS+TEDILT Sbjct: 674 GWIYGSITEDILT 686
>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9| [UDP-forming] (EC 2.4.1.12) (AtCesA-9) Length = 1088 Score = 113 bits (282), Expect = 5e-25 Identities = 83/260 (31%), Positives = 112/260 (43%), Gaps = 56/260 (21%) Frame = +1 Query: 10 KAPXHRHNFQAGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIH 189 K P H+ +AGAMN L RVSAV++NAP +LNVDCD + NN + AMC ++ Sbjct: 535 KRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIREAMCFMMDPQSGKK 594 Query: 190 SGFVQVPQKFYGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYG---- 357 +VQ PQ+F G + D + N+ V TGC RR+ +YG Sbjct: 595 ICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGFDAP 654 Query: 358 ---MPPPDT---------------------VKHETRGSP--------------------- 402 PP T VK R P Sbjct: 655 KKKQPPGRTCNCWPKWCCLCCGMRKKKTGKVKDNQRKKPKETSKQIHALEHIEEGLQVTN 714 Query: 403 -------SYKELQVRFGSSKVLIESSRNIISGDLLARPTVDVSSRIEMAKQVGDCNYEAG 561 + +L+ +FG S VL+ S+ + G V+ +S + + QV C YE Sbjct: 715 AENNSETAQLKLEKKFGQSPVLVASTLLLNGG---VPSNVNPASLLRESIQVISCGYEEK 771 Query: 562 TCWGKEIGWVYGSMTEDILT 621 T WGKEIGW+YGS+TEDILT Sbjct: 772 TEWGKEIGWIYGSVTEDILT 791
>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC| 2.4.1.12) (AtCesA-5) Length = 1069 Score = 112 bits (279), Expect = 1e-24 Identities = 83/260 (31%), Positives = 112/260 (43%), Gaps = 56/260 (21%) Frame = +1 Query: 10 KAPXHRHNFQAGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIH 189 K P H+ +AGAMN L RVS V++NAP +LNVDCD + NN + AMC ++ Sbjct: 517 KRPGFDHHKKAGAMNSLIRVSGVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKK 576 Query: 190 SGFVQVPQKFYGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPP 369 +VQ PQ+F G K D + N+ V TGC RR+ +YG P Sbjct: 577 ICYVQFPQRFDGIDKSDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYGFDAP 636 Query: 370 ------------------------------------------------DTVKHETRG--- 396 + ++ T+G Sbjct: 637 KKKKTKRMTCNCWPKWCLFCCGLRKNRKSKTTDKKKKNREASKQIHALENIEEGTKGTND 696 Query: 397 ---SPSYKELQV--RFGSSKVLIESSRNIISGDLLARPTVDVSSRIEMAKQVGDCNYEAG 561 SP +L++ +FG S V + S+ G LAR +S + A QV C YE Sbjct: 697 AAKSPEAAQLKLEKKFGQSPVFVASAGMENGG--LAR-NASPASLLREAIQVISCGYEDK 753 Query: 562 TCWGKEIGWVYGSMTEDILT 621 T WGKEIGW+YGS+TEDILT Sbjct: 754 TEWGKEIGWIYGSVTEDILT 773
>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC| 2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1 protein 1) (Isoxaben resistant protein 1) (Ath-B) Length = 1065 Score = 111 bits (278), Expect = 1e-24 Identities = 78/257 (30%), Positives = 111/257 (43%), Gaps = 53/257 (20%) Frame = +1 Query: 10 KAPXHRHNFQAGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIH 189 K P +H+ +AGAMN L RVSAV+TN P +LN+DCD + NN + AMC L+ + Sbjct: 512 KRPGFQHHKKAGAMNALVRVSAVLTNGPFILNLDCDHYINNSKALREAMCFLMDPNLGKQ 571 Query: 190 SGFVQVPQKFYGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPP 369 +VQ PQ+F G K+D + N+ V TGC R +YG PP Sbjct: 572 VCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPP 631 Query: 370 DTVKHE-------------TRGSPSYKELQVR--------------------------FG 432 VKH+ + S + KE + F Sbjct: 632 IKVKHKKPSLLSKLCGGSRKKNSKAKKESDKKKSGRHTDSTVPVFNLDDIEEGVEGAGFD 691 Query: 433 SSKVLIESSRNI----------ISGDLLAR----PTVDVSSRIEMAKQVGDCNYEAGTCW 570 K L+ S ++ ++ L+ P+ + ++ A V C YE + W Sbjct: 692 DEKALLMSQMSLEKRFGQSAVFVASTLMENGGVPPSATPENLLKEAIHVISCGYEDKSDW 751 Query: 571 GKEIGWVYGSMTEDILT 621 G EIGW+YGS+TEDILT Sbjct: 752 GMEIGWIYGSVTEDILT 768
>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC| 2.4.1.12) (AtCesA-7) (Irregular xylem protein 3) (AtIRX3) Length = 1026 Score = 110 bits (275), Expect = 3e-24 Identities = 75/242 (30%), Positives = 104/242 (42%), Gaps = 38/242 (15%) Frame = +1 Query: 10 KAPXHRHNFQAGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIH 189 K P +H+ +AGAMN L RV+ V+TNAP MLN+DCD + NN + AMC L+ Sbjct: 491 KRPGFQHHKKAGAMNALVRVAGVLTNAPFMLNLDCDHYVNNSKAVREAMCFLMDPQIGKK 550 Query: 190 SGFVQVPQKFYGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPP 369 +VQ PQ+F G +D + N+ V TGC +R+ +YG PP Sbjct: 551 VCYVQFPQRFDGIDTNDRYANRNTVFFDINMKGLDGIQGPVYVGTGCVFKRQALYGYEPP 610 Query: 370 DTVKHETR-------------------------------GSPSYKE-------LQVRFGS 435 K G+ KE + FG Sbjct: 611 KGPKRPKMISCGCCPCFGRRRKNKKFSKNDMNGDVAALGGAEGDKEHLMSEMNFEKTFGQ 670 Query: 436 SKVLIESSRNIISGDLLARPTVDVSSRIEMAKQVGDCNYEAGTCWGKEIGWVYGSMTEDI 615 S + + S+ G P+ + ++ A V C YE T WG E+GW+YGS+TEDI Sbjct: 671 SSIFVTSTLMEEGG---VPPSSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDI 727 Query: 616 LT 621 LT Sbjct: 728 LT 729
>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10| [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13) Length = 1065 Score = 107 bits (267), Expect = 3e-23 Identities = 81/259 (31%), Positives = 110/259 (42%), Gaps = 55/259 (21%) Frame = +1 Query: 10 KAPXHRHNFQAGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIH 189 K P +H+ +AGAMN L RVSAV+TN +LNVDCD + NN + AMC ++ Sbjct: 515 KRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGKK 574 Query: 190 SGFVQVPQKFYGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPP- 366 +VQ PQ+F G D + N+ V TGC R+ +YG P Sbjct: 575 CCYVQFPQRFDGIDLHDRYANRNTVFFDINLKGLDGIQGPVYVGTGCCFNRQALYGYDPV 634 Query: 367 -------PDTV---------KHETRGSPSY------------------------------ 408 P+ + K ++R P+Y Sbjct: 635 LTEEDLEPNIIVKSCFGSRKKGKSRKIPNYEDNRSIKRSDSNVPLFNMEDIDEDVEGYED 694 Query: 409 --------KELQVRFGSSKVLIESSRNIISGDLLARPTVDVSSRIEMAKQVGDCNYEAGT 564 K L+ RFG S V I ++ G T + + ++ A V C YEA T Sbjct: 695 EMSLLVSQKRLEKRFGQSPVFIAATFMEQGG---LPSTTNPLTLLKEAIHVISCGYEAKT 751 Query: 565 CWGKEIGWVYGSMTEDILT 621 WGKEIGW+YGS+TEDILT Sbjct: 752 DWGKEIGWIYGSVTEDILT 770
>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC| 2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2) (Protein PROCUSTE1) (Protein Quill) (AraxCelA) Length = 1084 Score = 103 bits (257), Expect = 4e-22 Identities = 79/260 (30%), Positives = 106/260 (40%), Gaps = 56/260 (21%) Frame = +1 Query: 10 KAPXHRHNFQAGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIH 189 K P H+ +AGAMN L RVS V++NAP +LNVDCD + NN + AMC ++ Sbjct: 529 KRPGFDHHKKAGAMNSLIRVSGVLSNAPYLLNVDCDHYINNSKALREAMCFMMDPQSGKK 588 Query: 190 SGFVQVPQKFYGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPP 369 +VQ PQ+F G + D + N+ V TGC RR+ +YG P Sbjct: 589 ICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRQALYGFDAP 648 Query: 370 DTVKHETRGSPSY-KELQVRFGSSK-------------------VLIESSRNIISGDLLA 489 K + + K + FGS K I + NI G + Sbjct: 649 KKKKGPRKTCNCWPKWCLLCFGSRKNRKAKTVAADKKKKNREASKQIHALENIEEGRVTK 708 Query: 490 RPTVDVSSR------------------------------------IEMAKQVGDCNYEAG 561 V+ S+ ++ A QV C YE Sbjct: 709 GSNVEQSTEAMQMKLEKKFGQSPVFVASARMENGGMARNASPACLLKEAIQVISCGYEDK 768 Query: 562 TCWGKEIGWVYGSMTEDILT 621 T WGKEIGW+YGS+TEDILT Sbjct: 769 TEWGKEIGWIYGSVTEDILT 788
>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC| 2.4.1.12) (AtCesA-2) (Ath-A) Length = 1084 Score = 103 bits (257), Expect = 4e-22 Identities = 74/258 (28%), Positives = 102/258 (39%), Gaps = 54/258 (20%) Frame = +1 Query: 10 KAPXHRHNFQAGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIH 189 K P H+ +AGAMN L RVSAV++NAP +LNVDCD + NN + +MC ++ Sbjct: 530 KRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAIRESMCFMMDPQSGKK 589 Query: 190 SGFVQVPQKFYGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPP 369 +VQ PQ+F G + D + N+ V TGC RR+ +YG P Sbjct: 590 VCYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGFDAP 649 Query: 370 DTVKH------------------ETRGSPSYKELQVRFGSSKVLIESSRNIISGDLLARP 495 K + K+ + + I + N+ G ++ Sbjct: 650 KKKKPPGKTCNCWPKWCCLCCGLRKKSKTKAKDKKTNTKETSKQIHALENVDEGVIVPVS 709 Query: 496 TVDVSSRIEMAK------------------------------------QVGDCNYEAGTC 567 V+ S K QV C YE T Sbjct: 710 NVEKRSEATQLKLEKKFGQSPVFVASAVLQNGGVPRNASPACLLREAIQVISCGYEDKTE 769 Query: 568 WGKEIGWVYGSMTEDILT 621 WGKEIGW+YGS+TEDILT Sbjct: 770 WGKEIGWIYGSVTEDILT 787
>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC| 2.4.1.12) (AtCesA-1) (Radially swollen protein 1) (AtRSW1) Length = 1081 Score = 99.4 bits (246), Expect = 8e-21 Identities = 74/256 (28%), Positives = 111/256 (43%), Gaps = 52/256 (20%) Frame = +1 Query: 10 KAPXHRHNFQAGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIH 189 K P +H+ +AGAMN L RVSAV+TN +LNVDCD + NN + AMC ++ Sbjct: 528 KRPGFQHHKKAGAMNALIRVSAVLTNGAYLLNVDCDHYFNNSKAIKEAMCFMMDPAIGKK 587 Query: 190 SGFVQVPQKFYGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPP- 366 +VQ PQ+F G D + N+ V TGC R+ +YG P Sbjct: 588 CCYVQFPQRFDGIDLHDRYANRNIVFFDINMKGLDGIQGPVYVGTGCCFNRQALYGYDPV 647 Query: 367 -------PDTV-------KHETRGSPSYKELQVR-----------------------FGS 435 P+ + + + + S Y + R + Sbjct: 648 LTEEDLEPNIIVKSCCGSRKKGKSSKKYNYEKRRGINRSDSNAPLFNMEDIDEGFEGYDD 707 Query: 436 SKVLIESSRNI----------ISGDLLAR----PTVDVSSRIEMAKQVGDCNYEAGTCWG 573 + ++ S R++ I+ + + PT + ++ ++ A V C YE T WG Sbjct: 708 ERSILMSQRSVEKRFGQSPVFIAATFMEQGGIPPTTNPATLLKEAIHVISCGYEDKTEWG 767 Query: 574 KEIGWVYGSMTEDILT 621 KEIGW+YGS+TEDILT Sbjct: 768 KEIGWIYGSVTEDILT 783
>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC| 2.4.1.12) (AtCesA-4) (Irregular xylem protein 5) (AtIRX5) Length = 1049 Score = 83.2 bits (204), Expect = 6e-16 Identities = 46/126 (36%), Positives = 64/126 (50%) Frame = +1 Query: 10 KAPXHRHNFQAGAMNVLTRVSAVMTNAPIMLNVDCDMFANNPQVALHAMCLLLGFDDEIH 189 K P + H+ +AGAMN + RVSAV+TNAP MLN+DCD + NN + +MC L+ Sbjct: 468 KRPGYAHHKKAGAMNAMVRVSAVLTNAPFMLNLDCDHYINNSKAIRESMCFLMDPQLGKK 527 Query: 190 SGFVQVPQKFYGGLKDDPFGNQMQVITKKXXXXXXXXXXXXXXXTGCFHRRKVIYGMPPP 369 +VQ PQ+F G +D + N+ V TGC R +YG PP Sbjct: 528 LCYVQFPQRFDGIDLNDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRPALYGYEPP 587 Query: 370 DTVKHE 387 + K + Sbjct: 588 VSEKRK 593 Score = 61.2 bits (147), Expect = 2e-09 Identities = 36/73 (49%), Positives = 44/73 (60%) Frame = +1 Query: 403 SYKELQVRFGSSKVLIESSRNIISGDLLARPTVDVSSRIEMAKQVGDCNYEAGTCWGKEI 582 S K + RFG S V I S+ ++ L T + SS I+ A V C YE T WGKEI Sbjct: 682 SQKNFEKRFGMSPVFIAST--LMENGGLPEAT-NTSSLIKEAIHVISCGYEEKTEWGKEI 738 Query: 583 GWVYGSMTEDILT 621 GW+YGS+TEDILT Sbjct: 739 GWIYGSVTEDILT 751
>FTZF1_DROME (P33244) Nuclear hormone receptor FTZ-F1 (FTZ-F1 alpha)| Length = 1027 Score = 31.2 bits (69), Expect = 2.6 Identities = 26/102 (25%), Positives = 41/102 (40%) Frame = +2 Query: 122 SPTIRRSPYTRCASYWGSTTRSTAGSSKCHRSSTVASRTIPLATRCRL*PRKLEVESPGS 301 S T P + AS GS + S +GS R+ A+ T + P + + S Sbjct: 276 STTTTTGPGSGSAS--GSGSGSGSGSGSIARTIGTATPTTTTSMSNTANPTRSSLHSIEE 333 Query: 302 KACSTAARAVFTAGKSFTACRHLTPSNTRQEVHHLTRSCKSG 427 A S+ A + + T+ TP +Q+ HH+ SG Sbjct: 334 LAASSCAPRAASPNSNHTSSASTTPQQQQQQQHHMQSGNHSG 375
>ILVD_CORJK (Q4JUN3) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)| Length = 615 Score = 29.6 bits (65), Expect = 7.5 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Frame = -2 Query: 213 LWHLDEPAVDLVVEPQ*EAHRV*GDLRIVGEHVAVHIQHDGSVGHHG----*HPCQNIHG 46 +WH + A LVVE Q EA RV D ++ HV V ++++G G G HP + G Sbjct: 449 IWHFEGKA--LVVESQEEAVRVILDKKVKPGHVVV-VRYEGPAGGPGMQEMLHPTAFLKG 505 Query: 45 TSL 37 L Sbjct: 506 AGL 508
>ATG15_ASPFU (Q4X180) Putative lipase atg15 (EC 3.1.1.3) (Autophagy-related| protein 15) Length = 650 Score = 29.3 bits (64), Expect = 9.8 Identities = 20/77 (25%), Positives = 35/77 (45%) Frame = +2 Query: 110 TATCSPTIRRSPYTRCASYWGSTTRSTAGSSKCHRSSTVASRTIPLATRCRL*PRKLEVE 289 T T +PT R+ + +WG ST ++ +ST + T + C+ P + Sbjct: 477 TTTTAPTTTRTSTCKTPGWWGCLDESTTTTT---TTSTTTTTTTTTTSTCKT-PGWFGCK 532 Query: 290 SPGSKACSTAARAVFTA 340 P + +TAA +V T+ Sbjct: 533 DPTTTTEATAAPSVTTS 549
>PCX1_FUGRU (Q98UF7) Pecanex-like protein 1 (Pecanex homolog)| Length = 1703 Score = 29.3 bits (64), Expect = 9.8 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Frame = +2 Query: 113 ATCSPTIRRSPYTRCASYWGSTTRSTAGSSKCHRSST--VASRTIPLATRCRL 265 A S + S Y +S S ST G C RSST ++ RT+P + + RL Sbjct: 1485 ARASVVSQSSSYRYSSSRHSSLRTSTTGLEPCRRSSTSQLSLRTLPTSLQLRL 1537 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 102,869,111 Number of Sequences: 219361 Number of extensions: 2405954 Number of successful extensions: 6840 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 6460 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6818 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5653129581 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
