>DROS_DROSI (Q6XMH8) Drosocin precursor|
          Length = 64

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2

Query: 38  YSPRPSRHDRPT*PRPAPIQTLPVHNAASLIRPPPV 145
           YSPRP+ H RP   R   +  +  H A + IRPPP+
Sbjct: 27  YSPRPTSHPRPIRVRREAL-AIEDHLAQAAIRPPPI 61

>DROS_DROME (P36193) Drosocin precursor|
          Length = 64

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = +2

Query: 38  YSPRPSRHDRPT*PRPAPIQTLPVHNAASLIRPPPV 145
           YSPRP+ H RP   R   +  +  H A + IRPPP+
Sbjct: 27  YSPRPTSHPRPIRVRREAL-AIEDHLAQAAIRPPPI 61

>PDC6I_HUMAN (Q8WUM4) Programmed cell death 6-interacting protein|
           (PDCD6-interacting protein) (ALG-2-interacting protein
           1) (Hp95)
          Length = 868

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +2

Query: 29  TPSYSPRPSRHDRPT*PRPAPIQTLPVHNAASLIRPPP 142
           TP+Y   P+    PT P PAP +T+P        RPPP
Sbjct: 724 TPAYQSSPAGGHAPTPPTPAP-RTMPPTKPQPPARPPP 760

>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)|
          Length = 1285

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = +2

Query: 20   PSWTPSYSPRPSRHDRPT*---PRPAPIQTLPVHNAASLIRPPPV 145
            PS TP+ SPRP     P+     +PAP+ T PV  A +++ P PV
Sbjct: 902  PSTTPT-SPRPQAQPSPSMVGHQQPAPVYTQPVCFAPNMMYPVPV 945

>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich|
           glycoprotein)
          Length = 620

 Score = 30.8 bits (68), Expect = 0.93
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +2

Query: 20  PSWTPSYSPRPSRHDRPT*PRPAPIQTLPVHNAASLIRPPPV 145
           P+ TP++SP P  +  P    P P   LP+ ++     PPPV
Sbjct: 311 PTPTPTFSPPPPAYSPPPTYSPPPPTYLPLPSSPIYSPPPPV 352



 Score = 27.7 bits (60), Expect = 7.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 50  PSRHDRPT*PRPAPIQTLPVHNAASLIRPPP 142
           PSRH  P  P  A     P+++ +  ++PPP
Sbjct: 172 PSRHGHPPPPTYAQPPPTPIYSPSPQVQPPP 202

>IF1C_SOYBN (Q94KR7) Translation initiation factor IF-1, chloroplast precursor|
          Length = 138

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 29  TPSYSPRPSRHDRPT*PRPAPIQTLPVHNAASLIRPPPV 145
           TP   PR   H  P+  + +P+   P H   S + PPP+
Sbjct: 7   TPILHPRYCHHPTPSCTQFSPLALPPFHRTLSFLAPPPL 45

>SC6A5_MOUSE (Q761V0) Sodium- and chloride-dependent glycine transporter 2|
           (GlyT2) (GlyT-2) (Solute carrier family 6 member 5)
          Length = 799

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 50  PSRHDRPT*PRPAPIQTLPVHNAASLIRPPPV 145
           P   D P  PR +P Q LP    A+ ++PP V
Sbjct: 22  PGHRDSPRAPRTSPEQDLPAEAPAATVQPPRV 53

>PGCB_BOVIN (Q28062) Brevican core protein precursor|
          Length = 912

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
 Frame = +2

Query: 32  PSYSPRPSRHDRPT*PRPA-----PIQTLPVHNAASLIRPPP 142
           P  SP P  +D P  PRP      P +TLP     +L  PPP
Sbjct: 518 PGVSPPP--YDEPEAPRPPRVLGPPTKTLPTPREGNLASPPP 557

>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional|
           activator IE175) (Alpha-4 protein)
          Length = 1298

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +2

Query: 44  PRPSRHDRPT*PRPAPIQTLPVHNAASLIRPPPVCMS 154
           P P+    P  P PAP Q      AA+  RP PV +S
Sbjct: 765 PAPAPPSTPPGPEPAPAQPAAPRAAAAQARPRPVAVS 801

>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)|
            (Trinucleotide repeat-containing gene 13 protein)
          Length = 1312

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = +2

Query: 20   PSWTPSYSPRPSRHDRPT*---PRPAPIQTLPVHNAASLIRPPPV 145
            PS TP+ SPRP     P+     +P P+ T PV  A +++ P PV
Sbjct: 930  PSTTPT-SPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPV 973

>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)|
          Length = 283

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 32  PSYSPRPSRHDRPT*PRPAPIQTLPVHNAASLIRPPP 142
           P+Y+P P     P  P+P P    P     S + PPP
Sbjct: 72  PTYTPSPKPTPPPATPKPTPPTYTPSPKPKSPVYPPP 108

>SC6A5_RAT (P58295) Sodium- and chloride-dependent glycine transporter 2|
           (GlyT2) (GlyT-2) (Solute carrier family 6 member 5)
          Length = 799

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 50  PSRHDRPT*PRPAPIQTLPVHNAASLIRPPPV 145
           P   D P  PR +P Q LP    A+ ++PP V
Sbjct: 22  PGHRDSPRAPRTSPEQDLPAAAPAAAVQPPRV 53

>ATR_DROME (Q9VXG8) Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia|
           telangiectasia and Rad3-related protein homolog) (ATR
           homolog) (dATR) (Meiotic protein 41)
          Length = 2517

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
 Frame = -2

Query: 161 HNMTYIQEGALLVTL----HYGQVASELELDAVKWVDHA-WMDVGCMT 33
           HN+   Q  +  +T     HY Q+   LE  A+ W   A W+D+GCMT
Sbjct: 215 HNVLRSQSASSWITNPDVGHYAQLT--LEATAIMWSAVAKWLDMGCMT 260

>PROK2_MOUSE (Q9QXU7) Prokineticin-2 precursor (PK2) (Protein Bv8 homolog)|
          Length = 128

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 153 DIHTGGGLISDAALWTGSV*IGAGRGQVGRSC 58
           D   GGG+    ++W  S+ I    GQVG SC
Sbjct: 36  DSQCGGGMCCAVSIWVKSIRICTPMGQVGDSC 67

>PROK2_RAT (Q8R413) Prokineticin-2 precursor (PK2)|
          Length = 107

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 153 DIHTGGGLISDAALWTGSV*IGAGRGQVGRSC 58
           D   GGG+    ++W  S+ I    GQVG SC
Sbjct: 36  DSQCGGGMCCAVSIWVKSIRICTPMGQVGDSC 67

>AMYG_CANAL (O74254) Glucoamylase 1 precursor (EC 3.2.1.3) (Glucan|
           1,4-alpha-glucosidase) (1,4-alpha-D-glucan
           glucohydrolase)
          Length = 946

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -1

Query: 213 HIDCTHA*LSIRTQSDWS-QYDIHTGGGLISDAALWTGSV*IGAGRGQ--VGRSCLDGRG 43
           H   THA     T +D + +YDIH   GLI + A++   + I   +    +GRS   G G
Sbjct: 560 HDLATHAISPNATHADGTVEYDIHNIYGLIQERAIYEALLEIHPNKRPFIIGRSSFAGSG 619

Query: 42  LYDG 31
            Y G
Sbjct: 620 KYMG 623

>GUNH_CLOTM (P16218) Endoglucanase H precursor (EC 3.2.1.4) (EGH)|
           (Endo-1,4-beta-glucanase) (Cellulase H)
          Length = 900

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +2

Query: 20  PSWTPSYSPRPSRHDRPT*PRPAP 91
           P   PSYSP+PS   RPT P   P
Sbjct: 631 PGTYPSYSPKPSPTPRPTKPPVTP 654

>ITCH_MOUSE (Q8C863) Itchy E3 ubiquitin protein ligase (EC 6.3.2.-)|
          Length = 864

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +2

Query: 32  PSYSPRPSRHDRPT*PRPAPIQTLPVHNAAS 124
           PS  PRPSR   PT  RPA +   P  N+ S
Sbjct: 209 PSRPPRPSRPPPPTPRRPASVNGSPSTNSDS 239

>ILVD_BACSK (Q5WEM9) Dihydroxy-acid dehydratase (EC 4.2.1.9) (DAD)|
          Length = 554

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = -1

Query: 183 IRTQSDWSQYDIHTGGGLISDAALWTGSV*IGAGRGQVGRSCLDGRGLYDGV 28
           I   SD+S  D+H  GG+   AA+    + +GA +G   R  + G+ LY+ V
Sbjct: 304 ISPASDYSMDDVHKAGGV---AAIMKELIEMGAVKGD--RITITGKSLYENV 350

>GLMU_STRSZ (Q8GQP7) Bifunctional protein glmU [Includes:|
           UDP-N-acetylglucosamine pyrophosphorylase (EC 2.7.7.23)
           (N-acetylglucosamine-1-phosphate uridyltransferase);
           Glucosamine-1-phosphate N-acetyltransferase (EC
           2.3.1.157)]
          Length = 460

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -1

Query: 189 LSIRTQSDWSQYDIHTGGGLISDAALWTGSV*IGAGRGQVGRSCLDGRGLYDGVQLGPHA 10
           ++++ Q+      + T G  I D+ L  G V        V +S ++G  L DGV +GP+A
Sbjct: 278 VTLKGQTRIGSRSVITNGSYILDSRLGEGVV--------VSQSVIEGSVLADGVTVGPYA 329

>GPDA_GLOVI (Q7NF59) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 305

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/57 (26%), Positives = 28/57 (49%)
 Frame = -1

Query: 183 IRTQSDWSQYDIHTGGGLISDAALWTGSV*IGAGRGQVGRSCLDGRGLYDGVQLGPH 13
           + T +DW   ++   GG++ +       V  G G G   ++ L  RGL + +++G H
Sbjct: 146 VYTSADWRGVEL---GGVLKNVIAIAAGVSDGLGLGANAKAALITRGLAEMIRVGTH 199

>PHC3_MOUSE (Q8CHP6) Polyhomeotic-like protein 3|
          Length = 981

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
 Frame = +2

Query: 29  TPSYSPRPSRHDRPT*PR---PAPIQTLPVHNAASLIRPPPVCMS 154
           +PS  P PS+H  P       PAP    P H +     PPP+ +S
Sbjct: 338 SPSQDPPPSQHCIPLPNHGLSPAPSNAQPQHCSPVQSHPPPLTVS 382

>K1543_HUMAN (Q9P1Y5) Protein KIAA1543|
          Length = 1249

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +2

Query: 20  PSWTPSYSPRPSRHDRPT*PRPAPIQTL--PVHNAASL 127
           P   PS SPR  +H RP   R AP+  +  P H+  SL
Sbjct: 770 PGPGPSQSPRSPKHTRPAELRLAPLTRVLTPPHDVDSL 807

>SAPS1_HUMAN (Q9UPN7) SAPS domain family member 1|
          Length = 881

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 17  GPSWTPSYSPRPSRHDRPT*PR 82
           GPSWT ++ P P+  D PT PR
Sbjct: 709 GPSWTATFDPVPT--DAPTSPR 728

>SNF5_YEAST (P18480) Transcription regulatory protein SNF5 (SWI/SNF complex|
           component SNF5) (Transcription factor TYE4)
          Length = 905

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 41  SPRPSRHDRPT*PRPAPIQTLPVHNAASLIRPPP 142
           SP P  H  P    P P Q+ P+ N ++   PPP
Sbjct: 71  SPPPQTHQSPP---PPPQQSQPIANQSATSTPPP 101

>CNG1_CHICK (Q90805) Cyclic nucleotide-gated channel, cone photoreceptor,|
           subunit alpha (CNG channel 1) (CNG-1)
          Length = 735

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 119 LHYGQVASELELDAVKWVDHAW 54
           +H+ +V  +LE   +KW D+ W
Sbjct: 466 MHFRKVTKDLEARVIKWFDYLW 487


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,519,197
Number of Sequences: 219361
Number of extensions: 922376
Number of successful extensions: 2550
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2538
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)