| Clone Name | baal30a15 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_493929.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2940 Score = 749 bits (378), Expect = 0.0 Identities = 568/630 (90%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 5 ttcagcccctctgagnctagcagtgactgctgagcctaatgacgagatgacagaggaaga 64 ||||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 736 ttcagcccctctgag-ctagcagtgactgctgagcctactgaggagatgacggaggaaga 794 Query: 65 gaagaaattgcatgacaaggttgagttgattcgtgtaaagtttctgcgccttgtctataa 124 |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 795 gaagaagctgcatgacaaggttgagttgatccgagtaaagtttctgcgccttgtctatag 854 Query: 125 attgggggcgacccctgaagagacagtagcagcacaagtgctgtaccgtctgagccttgc 184 ||||||||| || |||||||| ||||| |||||||| ||| ||||||||||||||||||| Sbjct: 855 attgggggctactcctgaagaaacagttgcagcacaggtgttgtaccgtctgagccttgc 914 Query: 185 cgagggtatccgacatggaaggcagacaaacagagctttcagccttgagaacgcacggaa 244 |||||||| ||||| ||||||||||||||| |||||||||||||||| || |||||||| Sbjct: 915 tgagggtattcgacacggaaggcagacaaaccgagctttcagccttgacaatgcacggaa 974 Query: 245 gaaagccttgctgcttgaagcggagggaaaagaggatttgagcttctcctgcaacatact 304 ||| ||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct: 975 gaaggccatgctgcttgaagcggagggaaaagaggagttgaacttctcatgcaacatact 1034 Query: 305 tgtcttggggaagattggagttggcaaaagtgcaactataaattctatatttggcgaagt 364 ||| ||||||||||| || || || |||||||||||||||||||| || ||||| |||| Sbjct: 1035 tgttttggggaagataggggtcggaaaaagtgcaactataaattcaatttttggtgaaga 1094 Query: 365 gaagtccaaaactgatgcttttggtgcagccaccaccagcgtgcgtgaaattgttggtaa 424 ||||||||||||||||||||| || ||||||||| ||| || || || ||||||||||| Sbjct: 1095 gaagtccaaaactgatgctttcagttcagccaccaacagtgtacgggagattgttggtaa 1154 Query: 425 tgtggatggtgtcaagattcggatcattgatacaccaggtcttcggcccaatgtgatgga 484 ||| ||||||||| |||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 1155 tgtcgatggtgtccagatacggatcattgatactccaggccttcgacccaatgtgatgga 1214 Query: 485 ccaaggagccaacaggaaaattctctcatccgtcaagaaatataccaagagatgtccccc 544 ||||||| ||||||| ||||| ||| | || ||||||||||||||||||||||| ||||| Sbjct: 1215 ccaaggatccaacagaaaaatcctcgcttctgtcaagaaatataccaagagatgcccccc 1274 Query: 545 agatatcgttctatatgtggaccgtctcgatagtctgagccgtgatcttaatgatttgcc 604 |||||| ||||| ||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 1275 agatattgttctgtatgtggaccgcctggatagtctgagccgtgatctcaatgatttgcc 1334 Query: 605 tcttctaaaaaccattacttctgttctggg 634 ||||||||| |||||||||||||||||||| Sbjct: 1335 tcttctaaagaccattacttctgttctggg 1364
>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07, complete sequence Length = 164898 Score = 749 bits (378), Expect = 0.0 Identities = 568/630 (90%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 5 ttcagcccctctgagnctagcagtgactgctgagcctaatgacgagatgacagaggaaga 64 ||||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 110333 ttcagcccctctgag-ctagcagtgactgctgagcctactgaggagatgacggaggaaga 110275 Query: 65 gaagaaattgcatgacaaggttgagttgattcgtgtaaagtttctgcgccttgtctataa 124 |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 110274 gaagaagctgcatgacaaggttgagttgatccgagtaaagtttctgcgccttgtctatag 110215 Query: 125 attgggggcgacccctgaagagacagtagcagcacaagtgctgtaccgtctgagccttgc 184 ||||||||| || |||||||| ||||| |||||||| ||| ||||||||||||||||||| Sbjct: 110214 attgggggctactcctgaagaaacagttgcagcacaggtgttgtaccgtctgagccttgc 110155 Query: 185 cgagggtatccgacatggaaggcagacaaacagagctttcagccttgagaacgcacggaa 244 |||||||| ||||| ||||||||||||||| |||||||||||||||| || |||||||| Sbjct: 110154 tgagggtattcgacacggaaggcagacaaaccgagctttcagccttgacaatgcacggaa 110095 Query: 245 gaaagccttgctgcttgaagcggagggaaaagaggatttgagcttctcctgcaacatact 304 ||| ||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct: 110094 gaaggccatgctgcttgaagcggagggaaaagaggagttgaacttctcatgcaacatact 110035 Query: 305 tgtcttggggaagattggagttggcaaaagtgcaactataaattctatatttggcgaagt 364 ||| ||||||||||| || || || |||||||||||||||||||| || ||||| |||| Sbjct: 110034 tgttttggggaagataggggtcggaaaaagtgcaactataaattcaatttttggtgaaga 109975 Query: 365 gaagtccaaaactgatgcttttggtgcagccaccaccagcgtgcgtgaaattgttggtaa 424 ||||||||||||||||||||| || ||||||||| ||| || || || ||||||||||| Sbjct: 109974 gaagtccaaaactgatgctttcagttcagccaccaacagtgtacgggagattgttggtaa 109915 Query: 425 tgtggatggtgtcaagattcggatcattgatacaccaggtcttcggcccaatgtgatgga 484 ||| ||||||||| |||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 109914 tgtcgatggtgtccagatacggatcattgatactccaggccttcgacccaatgtgatgga 109855 Query: 485 ccaaggagccaacaggaaaattctctcatccgtcaagaaatataccaagagatgtccccc 544 ||||||| ||||||| ||||| ||| | || ||||||||||||||||||||||| ||||| Sbjct: 109854 ccaaggatccaacagaaaaatcctcgcttctgtcaagaaatataccaagagatgcccccc 109795 Query: 545 agatatcgttctatatgtggaccgtctcgatagtctgagccgtgatcttaatgatttgcc 604 |||||| ||||| ||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 109794 agatattgttctgtatgtggaccgcctggatagtctgagccgtgatctcaatgatttgcc 109735 Query: 605 tcttctaaaaaccattacttctgttctggg 634 ||||||||| |||||||||||||||||||| Sbjct: 109734 tcttctaaagaccattacttctgttctggg 109705
>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16, complete sequence Length = 159525 Score = 749 bits (378), Expect = 0.0 Identities = 568/630 (90%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 5 ttcagcccctctgagnctagcagtgactgctgagcctaatgacgagatgacagaggaaga 64 ||||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 9738 ttcagcccctctgag-ctagcagtgactgctgagcctactgaggagatgacggaggaaga 9680 Query: 65 gaagaaattgcatgacaaggttgagttgattcgtgtaaagtttctgcgccttgtctataa 124 |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 9679 gaagaagctgcatgacaaggttgagttgatccgagtaaagtttctgcgccttgtctatag 9620 Query: 125 attgggggcgacccctgaagagacagtagcagcacaagtgctgtaccgtctgagccttgc 184 ||||||||| || |||||||| ||||| |||||||| ||| ||||||||||||||||||| Sbjct: 9619 attgggggctactcctgaagaaacagttgcagcacaggtgttgtaccgtctgagccttgc 9560 Query: 185 cgagggtatccgacatggaaggcagacaaacagagctttcagccttgagaacgcacggaa 244 |||||||| ||||| ||||||||||||||| |||||||||||||||| || |||||||| Sbjct: 9559 tgagggtattcgacacggaaggcagacaaaccgagctttcagccttgacaatgcacggaa 9500 Query: 245 gaaagccttgctgcttgaagcggagggaaaagaggatttgagcttctcctgcaacatact 304 ||| ||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct: 9499 gaaggccatgctgcttgaagcggagggaaaagaggagttgaacttctcatgcaacatact 9440 Query: 305 tgtcttggggaagattggagttggcaaaagtgcaactataaattctatatttggcgaagt 364 ||| ||||||||||| || || || |||||||||||||||||||| || ||||| |||| Sbjct: 9439 tgttttggggaagataggggtcggaaaaagtgcaactataaattcaatttttggtgaaga 9380 Query: 365 gaagtccaaaactgatgcttttggtgcagccaccaccagcgtgcgtgaaattgttggtaa 424 ||||||||||||||||||||| || ||||||||| ||| || || || ||||||||||| Sbjct: 9379 gaagtccaaaactgatgctttcagttcagccaccaacagtgtacgggagattgttggtaa 9320 Query: 425 tgtggatggtgtcaagattcggatcattgatacaccaggtcttcggcccaatgtgatgga 484 ||| ||||||||| |||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 9319 tgtcgatggtgtccagatacggatcattgatactccaggccttcgacccaatgtgatgga 9260 Query: 485 ccaaggagccaacaggaaaattctctcatccgtcaagaaatataccaagagatgtccccc 544 ||||||| ||||||| ||||| ||| | || ||||||||||||||||||||||| ||||| Sbjct: 9259 ccaaggatccaacagaaaaatcctcgcttctgtcaagaaatataccaagagatgcccccc 9200 Query: 545 agatatcgttctatatgtggaccgtctcgatagtctgagccgtgatcttaatgatttgcc 604 |||||| ||||| ||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 9199 agatattgttctgtatgtggaccgcctggatagtctgagccgtgatctcaatgatttgcc 9140 Query: 605 tcttctaaaaaccattacttctgttctggg 634 ||||||||| |||||||||||||||||||| Sbjct: 9139 tcttctaaagaccattacttctgttctggg 9110
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 749 bits (378), Expect = 0.0 Identities = 568/630 (90%), Gaps = 1/630 (0%) Strand = Plus / Minus Query: 5 ttcagcccctctgagnctagcagtgactgctgagcctaatgacgagatgacagaggaaga 64 ||||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 2915722 ttcagcccctctgag-ctagcagtgactgctgagcctactgaggagatgacggaggaaga 2915664 Query: 65 gaagaaattgcatgacaaggttgagttgattcgtgtaaagtttctgcgccttgtctataa 124 |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 2915663 gaagaagctgcatgacaaggttgagttgatccgagtaaagtttctgcgccttgtctatag 2915604 Query: 125 attgggggcgacccctgaagagacagtagcagcacaagtgctgtaccgtctgagccttgc 184 ||||||||| || |||||||| ||||| |||||||| ||| ||||||||||||||||||| Sbjct: 2915603 attgggggctactcctgaagaaacagttgcagcacaggtgttgtaccgtctgagccttgc 2915544 Query: 185 cgagggtatccgacatggaaggcagacaaacagagctttcagccttgagaacgcacggaa 244 |||||||| ||||| ||||||||||||||| |||||||||||||||| || |||||||| Sbjct: 2915543 tgagggtattcgacacggaaggcagacaaaccgagctttcagccttgacaatgcacggaa 2915484 Query: 245 gaaagccttgctgcttgaagcggagggaaaagaggatttgagcttctcctgcaacatact 304 ||| ||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct: 2915483 gaaggccatgctgcttgaagcggagggaaaagaggagttgaacttctcatgcaacatact 2915424 Query: 305 tgtcttggggaagattggagttggcaaaagtgcaactataaattctatatttggcgaagt 364 ||| ||||||||||| || || || |||||||||||||||||||| || ||||| |||| Sbjct: 2915423 tgttttggggaagataggggtcggaaaaagtgcaactataaattcaatttttggtgaaga 2915364 Query: 365 gaagtccaaaactgatgcttttggtgcagccaccaccagcgtgcgtgaaattgttggtaa 424 ||||||||||||||||||||| || ||||||||| ||| || || || ||||||||||| Sbjct: 2915363 gaagtccaaaactgatgctttcagttcagccaccaacagtgtacgggagattgttggtaa 2915304 Query: 425 tgtggatggtgtcaagattcggatcattgatacaccaggtcttcggcccaatgtgatgga 484 ||| ||||||||| |||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 2915303 tgtcgatggtgtccagatacggatcattgatactccaggccttcgacccaatgtgatgga 2915244 Query: 485 ccaaggagccaacaggaaaattctctcatccgtcaagaaatataccaagagatgtccccc 544 ||||||| ||||||| ||||| ||| | || ||||||||||||||||||||||| ||||| Sbjct: 2915243 ccaaggatccaacagaaaaatcctcgcttctgtcaagaaatataccaagagatgcccccc 2915184 Query: 545 agatatcgttctatatgtggaccgtctcgatagtctgagccgtgatcttaatgatttgcc 604 |||||| ||||| ||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 2915183 agatattgttctgtatgtggaccgcctggatagtctgagccgtgatctcaatgatttgcc 2915124 Query: 605 tcttctaaaaaccattacttctgttctggg 634 ||||||||| |||||||||||||||||||| Sbjct: 2915123 tcttctaaagaccattacttctgttctggg 2915094
>dbj|AK102924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D01, full insert sequence Length = 4269 Score = 749 bits (378), Expect = 0.0 Identities = 568/630 (90%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 5 ttcagcccctctgagnctagcagtgactgctgagcctaatgacgagatgacagaggaaga 64 ||||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 1845 ttcagcccctctgag-ctagcagtgactgctgagcctactgaggagatgacggaggaaga 1903 Query: 65 gaagaaattgcatgacaaggttgagttgattcgtgtaaagtttctgcgccttgtctataa 124 |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1904 gaagaagctgcatgacaaggttgagttgatccgagtaaagtttctgcgccttgtctatag 1963 Query: 125 attgggggcgacccctgaagagacagtagcagcacaagtgctgtaccgtctgagccttgc 184 ||||||||| || |||||||| ||||| |||||||| ||| ||||||||||||||||||| Sbjct: 1964 attgggggctactcctgaagaaacagttgcagcacaggtgttgtaccgtctgagccttgc 2023 Query: 185 cgagggtatccgacatggaaggcagacaaacagagctttcagccttgagaacgcacggaa 244 |||||||| ||||| ||||||||||||||| |||||||||||||||| || |||||||| Sbjct: 2024 tgagggtattcgacacggaaggcagacaaaccgagctttcagccttgacaatgcacggaa 2083 Query: 245 gaaagccttgctgcttgaagcggagggaaaagaggatttgagcttctcctgcaacatact 304 ||| ||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct: 2084 gaaggccatgctgcttgaagcggagggaaaagaggagttgaacttctcatgcaacatact 2143 Query: 305 tgtcttggggaagattggagttggcaaaagtgcaactataaattctatatttggcgaagt 364 ||| ||||||||||| || || || |||||||||||||||||||| || ||||| |||| Sbjct: 2144 tgttttggggaagataggggtcggaaaaagtgcaactataaattcaatttttggtgaaga 2203 Query: 365 gaagtccaaaactgatgcttttggtgcagccaccaccagcgtgcgtgaaattgttggtaa 424 ||||||||||||||||||||| || ||||||||| ||| || || || ||||||||||| Sbjct: 2204 gaagtccaaaactgatgctttcagttcagccaccaacagtgtacgggagattgttggtaa 2263 Query: 425 tgtggatggtgtcaagattcggatcattgatacaccaggtcttcggcccaatgtgatgga 484 ||| ||||||||| |||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 2264 tgtcgatggtgtccagatacggatcattgatactccaggccttcgacccaatgtgatgga 2323 Query: 485 ccaaggagccaacaggaaaattctctcatccgtcaagaaatataccaagagatgtccccc 544 ||||||| ||||||| ||||| ||| | || ||||||||||||||||||||||| ||||| Sbjct: 2324 ccaaggatccaacagaaaaatcctcgcttctgtcaagaaatataccaagagatgcccccc 2383 Query: 545 agatatcgttctatatgtggaccgtctcgatagtctgagccgtgatcttaatgatttgcc 604 |||||| ||||| ||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 2384 agatattgttctgtatgtggaccgcctggatagtctgagccgtgatctcaatgatttgcc 2443 Query: 605 tcttctaaaaaccattacttctgttctggg 634 ||||||||| |||||||||||||||||||| Sbjct: 2444 tcttctaaagaccattacttctgttctggg 2473
>dbj|AK065647.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038D10, full insert sequence Length = 3790 Score = 749 bits (378), Expect = 0.0 Identities = 568/630 (90%), Gaps = 1/630 (0%) Strand = Plus / Plus Query: 5 ttcagcccctctgagnctagcagtgactgctgagcctaatgacgagatgacagaggaaga 64 ||||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 1363 ttcagcccctctgag-ctagcagtgactgctgagcctactgaggagatgacggaggaaga 1421 Query: 65 gaagaaattgcatgacaaggttgagttgattcgtgtaaagtttctgcgccttgtctataa 124 |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1422 gaagaagctgcatgacaaggttgagttgatccgagtaaagtttctgcgccttgtctatag 1481 Query: 125 attgggggcgacccctgaagagacagtagcagcacaagtgctgtaccgtctgagccttgc 184 ||||||||| || |||||||| ||||| |||||||| ||| ||||||||||||||||||| Sbjct: 1482 attgggggctactcctgaagaaacagttgcagcacaggtgttgtaccgtctgagccttgc 1541 Query: 185 cgagggtatccgacatggaaggcagacaaacagagctttcagccttgagaacgcacggaa 244 |||||||| ||||| ||||||||||||||| |||||||||||||||| || |||||||| Sbjct: 1542 tgagggtattcgacacggaaggcagacaaaccgagctttcagccttgacaatgcacggaa 1601 Query: 245 gaaagccttgctgcttgaagcggagggaaaagaggatttgagcttctcctgcaacatact 304 ||| ||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||| Sbjct: 1602 gaaggccatgctgcttgaagcggagggaaaagaggagttgaacttctcatgcaacatact 1661 Query: 305 tgtcttggggaagattggagttggcaaaagtgcaactataaattctatatttggcgaagt 364 ||| ||||||||||| || || || |||||||||||||||||||| || ||||| |||| Sbjct: 1662 tgttttggggaagataggggtcggaaaaagtgcaactataaattcaatttttggtgaaga 1721 Query: 365 gaagtccaaaactgatgcttttggtgcagccaccaccagcgtgcgtgaaattgttggtaa 424 ||||||||||||||||||||| || ||||||||| ||| || || || ||||||||||| Sbjct: 1722 gaagtccaaaactgatgctttcagttcagccaccaacagtgtacgggagattgttggtaa 1781 Query: 425 tgtggatggtgtcaagattcggatcattgatacaccaggtcttcggcccaatgtgatgga 484 ||| ||||||||| |||| |||||||||||||| ||||| ||||| |||||||||||||| Sbjct: 1782 tgtcgatggtgtccagatacggatcattgatactccaggccttcgacccaatgtgatgga 1841 Query: 485 ccaaggagccaacaggaaaattctctcatccgtcaagaaatataccaagagatgtccccc 544 ||||||| ||||||| ||||| ||| | || ||||||||||||||||||||||| ||||| Sbjct: 1842 ccaaggatccaacagaaaaatcctcgcttctgtcaagaaatataccaagagatgcccccc 1901 Query: 545 agatatcgttctatatgtggaccgtctcgatagtctgagccgtgatcttaatgatttgcc 604 |||||| ||||| ||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct: 1902 agatattgttctgtatgtggaccgcctggatagtctgagccgtgatctcaatgatttgcc 1961 Query: 605 tcttctaaaaaccattacttctgttctggg 634 ||||||||| |||||||||||||||||||| Sbjct: 1962 tcttctaaagaccattacttctgttctggg 1991
>gb|BT018894.1| Zea mays clone EL01T0206D09.d mRNA sequence Length = 2400 Score = 505 bits (255), Expect = e-140 Identities = 495/575 (86%) Strand = Plus / Plus Query: 57 gaggaagagaagaaattgcatgacaaggttgagttgattcgtgtaaagtttctgcgcctt 116 |||||||||||||| ||||||||||||||||||||||| | |||||||||||||| || Sbjct: 9 gaggaagagaagaagctgcatgacaaggttgagttgattagagtaaagtttctgcgtctg 68 Query: 117 gtctataaattgggggcgacccctgaagagacagtagcagcacaagtgctgtaccgtctg 176 || || | |||||| || || |||||||| || || |||||||||||||||||||||||| Sbjct: 69 gtttacagattgggagctactcctgaagaaacggttgcagcacaagtgctgtaccgtctg 128 Query: 177 agccttgccgagggtatccgacatggaaggcagacaaacagagctttcagccttgagaac 236 |||||||| ||||||||||||||||| |||||||| ||| |||| ||||||||||| || Sbjct: 129 agccttgctgagggtatccgacatggcaggcagacgaaccgagcattcagccttgataat 188 Query: 237 gcacggaagaaagccttgctgcttgaagcggagggaaaagaggatttgagcttctcctgc 296 ||||||| ||| ||||| || |||||||| ||||||||||||||| ||| |||||| ||| Sbjct: 189 gcacggaggaaggccttacttcttgaagcagagggaaaagaggatctgaacttctcatgc 248 Query: 297 aacatacttgtcttggggaagattggagttggcaaaagtgcaactataaattctatattt 356 ||||||||||| | || || | |||||| ||||||||||||||||| |||||||||||| Sbjct: 249 aacatacttgttctaggaaaaactggagtcggcaaaagtgcaactatcaattctatattt 308 Query: 357 ggcgaagtgaagtccaaaactgatgcttttggtgcagccaccaccagcgtgcgtgaaatt 416 || |||| |||||||| |||||| || ||| | |||| ||||| | ||||| |||||| Sbjct: 309 ggtgaagagaagtccagaactgacgcctttagctcagcaaccacaaatgtgcgggaaatt 368 Query: 417 gttggtaatgtggatggtgtcaagattcggatcattgatacaccaggtcttcggcccaat 476 |||||| |||||||||||||||||||| | |||||||||||||| || ||||| || || Sbjct: 369 gttggtgatgtggatggtgtcaagattagaatcattgatacacctggccttcgacctaac 428 Query: 477 gtgatggaccaaggagccaacaggaaaattctctcatccgtcaagaaatataccaagaga 536 ||||||||||| ||| | ||||| || ||||| | | |||||||| |||||||||| | Sbjct: 429 gtgatggaccagggatcaaacagaaagattcttgctgctgtcaagaactataccaagaaa 488 Query: 537 tgtcccccagatatcgttctatatgtggaccgtctcgatagtctgagccgtgatcttaat 596 ||||| |||||||| |||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 489 tgtccgccagatattgttctatatgtggatcgtctggatagtctgagccgtgatctcaat 548 Query: 597 gatttgcctcttctaaaaaccattacttctgttct 631 |||||||||||||| || || |||||| ||||||| Sbjct: 549 gatttgcctcttctgaagactattactgctgttct 583
>dbj|AK061885.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F07, full insert sequence Length = 1993 Score = 297 bits (150), Expect = 2e-77 Identities = 231/258 (89%) Strand = Plus / Plus Query: 377 tgatgcttttggtgcagccaccaccagcgtgcgtgaaattgttggtaatgtggatggtgt 436 ||||||||| || ||||||||| ||| || || || |||||||||||||| |||||||| Sbjct: 1 tgatgctttcagttcagccaccaacagtgtacgggagattgttggtaatgtcgatggtgt 60 Query: 437 caagattcggatcattgatacaccaggtcttcggcccaatgtgatggaccaaggagccaa 496 | |||| |||||||||||||| ||||| ||||| ||||||||||||||||||||| |||| Sbjct: 61 ccagatacggatcattgatactccaggccttcgacccaatgtgatggaccaaggatccaa 120 Query: 497 caggaaaattctctcatccgtcaagaaatataccaagagatgtcccccagatatcgttct 556 ||| ||||| ||| | || ||||||||||||||||||||||| ||||||||||| ||||| Sbjct: 121 cagaaaaatcctcgcttctgtcaagaaatataccaagagatgccccccagatattgttct 180 Query: 557 atatgtggaccgtctcgatagtctgagccgtgatcttaatgatttgcctcttctaaaaac 616 ||||||||||| || |||||||||||||||||||| |||||||||||||||||||| || Sbjct: 181 gtatgtggaccgcctggatagtctgagccgtgatctcaatgatttgcctcttctaaagac 240 Query: 617 cattacttctgttctggg 634 |||||||||||||||||| Sbjct: 241 cattacttctgttctggg 258
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 277 aggatttgagcttctcctgcaacatacttgtcttggggaagattggagttggcaaaagtg 336 |||||||||||||||| ||||| ||||||||| | || |||||||| ||||| |||||| Sbjct: 14412271 aggatttgagcttctcatgcaatatacttgtcctaggaaagattggggttggtaaaagta 14412330 Query: 337 caactataaattc 349 || ||||||||| Sbjct: 14412331 cagttataaattc 14412343 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 ccaatgtgatggaccaagga 491 |||||||||||||||||||| Sbjct: 14412466 ccaatgtgatggaccaagga 14412485
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 277 aggatttgagcttctcctgcaacatacttgtcttggggaagattggagttggcaaaagtg 336 |||||||||||||||| ||||| ||||||||| | || |||||||| ||||| |||||| Sbjct: 73668 aggatttgagcttctcatgcaatatacttgtcctaggaaagattggggttggtaaaagta 73727 Query: 337 caactataaattc 349 || ||||||||| Sbjct: 73728 cagttataaattc 73740 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 ccaatgtgatggaccaagga 491 |||||||||||||||||||| Sbjct: 73863 ccaatgtgatggaccaagga 73882
>gb|AC157349.7| Medicago truncatula clone mth2-139l1, complete sequence Length = 116909 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 287 cttctcctgcaacatacttgtcttggggaagattggagttggcaaaagtgcaactataaa 346 ||||||||||| ||||||||| | || || | |||||||| |||||||| |||||||| Sbjct: 94992 cttctcctgcagaatacttgtccttggtaaaacaggagttggaaaaagtgccactataaa 95051 Query: 347 ttctatatttg 357 |||||||||| Sbjct: 95052 ctctatatttg 95062
>ref|NM_127216.3| Arabidopsis thaliana ATTOC132/TOC132; transmembrane receptor AT2G16640 (ATTOC132/TOC132) mRNA, complete cds Length = 3952 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 324 gttggcaaaagtgcaactataaattctatatttggcgaagtgaa 367 ||||| ||||||||||| || ||||||||||||| |||||||| Sbjct: 1821 gttggtaaaagtgcaacgatcaattctatatttgatgaagtgaa 1864
>gb|AY099660.1| Arabidopsis thaliana putative chloroplast outer membrane protein (At2g16640) mRNA, complete cds Length = 3951 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Plus Query: 324 gttggcaaaagtgcaactataaattctatatttggcgaagtgaa 367 ||||| ||||||||||| || ||||||||||||| |||||||| Sbjct: 1821 gttggtaaaagtgcaacgatcaattctatatttgatgaagtgaa 1864
>gb|AC005825.4| Arabidopsis thaliana chromosome 2 clone T24I21 map mi398, complete sequence Length = 112792 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 324 gttggcaaaagtgcaactataaattctatatttggcgaagtgaa 367 ||||| ||||||||||| || ||||||||||||| |||||||| Sbjct: 17744 gttggtaaaagtgcaacgatcaattctatatttgatgaagtgaa 17701
>emb|BX548026.10| Zebrafish DNA sequence from clone CH211-193D9, complete sequence Length = 147902 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 307 tcttggggaagattggagttggcaaaagtgca 338 |||||||||||| ||||||||| ||||||||| Sbjct: 29522 tcttggggaagactggagttgggaaaagtgca 29553
>emb|AL953865.9| Zebrafish DNA sequence from clone CH211-113E8 in linkage group 1, complete sequence Length = 157603 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 307 tcttggggaagattggagttggcaaaagtgca 338 |||||||||||| ||||||||| ||||||||| Sbjct: 75824 tcttggggaagactggagttgggaaaagtgca 75793
>gb|AF262939.1|AF262939 Pisum sativum chloroplast protein import component Toc159 mRNA, complete cds Length = 4725 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 540 cccccagatatcgttctatatgtggaccgtctcga 574 ||||| ||||| ||||||||||||||||| ||||| Sbjct: 2800 ccccctgatattgttctatatgtggaccgcctcga 2834
>emb|Z31581.1|PSCLOUEP P.sativum (miranda) mRNA for chloroplast outer envelope protein 86 Length = 3100 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 540 cccccagatatcgttctatatgtggaccgtctcga 574 ||||| ||||| ||||||||||||||||| ||||| Sbjct: 1175 ccccctgatattgttctatatgtggaccgcctcga 1209
>gb|L36857.1|PEAIAP86A Pisum sativum GTP-binding protein (IAP86) mRNA, complete cds Length = 2923 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Plus Query: 540 cccccagatatcgttctatatgtggaccgtctcga 574 ||||| ||||| ||||||||||||||||| ||||| Sbjct: 1023 ccccctgatattgttctatatgtggaccgcctcga 1057
>emb|AL354821.21| Human DNA sequence from clone RP11-538N17 on chromosome 13, complete sequence Length = 200087 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 agatgacagaggaagagaaga 69 ||||||||||||||||||||| Sbjct: 37894 agatgacagaggaagagaaga 37874
>ref|XM_787436.1| PREDICTED: Strongylocentrotus purpuratus similar to SWI/SNF-related, matrix associated, actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 (Enhancer trap locus homolog 1) (Etl-1) (LOC587725), mRNA Length = 1542 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 47 cgagatgacagaggaagagaagaaa 71 |||||||||||||||| |||||||| Sbjct: 678 cgagatgacagaggaacagaagaaa 702
>gb|AC096777.1| Mus musculus clone RP23-106L19, complete sequence Length = 209671 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 atgacagaggaagagaagaaa 71 ||||||||||||||||||||| Sbjct: 35767 atgacagaggaagagaagaaa 35787
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 taatgacgagatgacagagga 61 ||||||||||||||||||||| Sbjct: 9405819 taatgacgagatgacagagga 9405799
>gb|AC099053.2| Homo sapiens chromosome 3 clone RP11-464H2, complete sequence Length = 200069 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 agatgacagaggaagagaaga 69 ||||||||||||||||||||| Sbjct: 94712 agatgacagaggaagagaaga 94732
>dbj|AP003044.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0038C05 Length = 152941 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 taatgacgagatgacagagga 61 ||||||||||||||||||||| Sbjct: 134229 taatgacgagatgacagagga 134209
>emb|AL772280.10| Mouse DNA sequence from clone RP23-97P11 on chromosome 4, complete sequence Length = 152145 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 aaggagccaacaggaaaattc 507 ||||||||||||||||||||| Sbjct: 53270 aaggagccaacaggaaaattc 53290
>gb|AC154520.3| Mus musculus BAC clone RP23-471P16 from chromosome 14, complete sequence Length = 199186 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 tgacagaggaagagaagaaa 71 |||||||||||||||||||| Sbjct: 170473 tgacagaggaagagaagaaa 170454
>gb|DQ360811.1| Caenorhabditis elegans intraflagellar transport protein (osm-1) mRNA, complete cds Length = 5308 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 attggagttggcaaaagtgc 337 |||||||||||||||||||| Sbjct: 2183 attggagttggcaaaagtgc 2202
>gb|AC123614.6| Mus musculus chromosome 9, clone RP23-446P16, complete sequence Length = 210060 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tatatttggcgaagtgaagt 369 |||||||||||||||||||| Sbjct: 151583 tatatttggcgaagtgaagt 151602
>gb|AC139572.4| Mus musculus BAC clone RP24-196P9 from chromosome 7, complete sequence Length = 165198 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 cgacatggaaggcagacaaacaga 218 |||||||||||||||||| ||||| Sbjct: 105039 cgacatggaaggcagacacacaga 105016
>emb|CT009519.4| Mouse DNA sequence from clone RP23-145L1 on chromosome 14, complete sequence Length = 216678 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tgacagaggaagagaagaaa 71 |||||||||||||||||||| Sbjct: 190507 tgacagaggaagagaagaaa 190526
>ref|XM_749096.1| Aspergillus fumigatus Af293 DNA-directed RNA polymerase III largest subunit (Afu3g14370) partial mRNA Length = 4362 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gtatccgacatggaaggcag 209 |||||||||||||||||||| Sbjct: 318 gtatccgacatggaaggcag 299
>gb|AC123047.3| Mus musculus BAC clone RP24-378B22 from chromosome 7, complete sequence Length = 157795 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 caagtgctgtaccgtctgagcctt 182 |||||||||||||| ||||||||| Sbjct: 114357 caagtgctgtaccgactgagcctt 114380
>emb|Z50028.1|CEF46F6 Caenorhabditis elegans Cosmid F46F6, complete sequence Length = 25550 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 atgcttttggtgcagccaccacca 402 |||||||| ||||||||||||||| Sbjct: 5154 atgcttttagtgcagccaccacca 5131
>emb|AL592144.5| Human DNA sequence from clone RP11-476B1 on chromosome 1 Contains a novel gene, complete sequence Length = 197322 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 tgacagaggaagagaagaaa 71 |||||||||||||||||||| Sbjct: 46715 tgacagaggaagagaagaaa 46734
>emb|AL357075.17| Human DNA sequence from clone RP11-486M3 on chromosome 6 Contains the gene for similar to maguin-2; maguin-1 (LOC154043, FLJ31349) and a novel pseudogene. Contains a CpG island, complete sequence Length = 178461 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 42 aatgacgagatgacagaggaagagaaga 69 |||||| || |||||||||||||||||| Sbjct: 171230 aatgactagttgacagaggaagagaaga 171257
>gb|AC023684.4| Drosophila melanogaster X BAC RP98-7P13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178077 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 aaagtgcaactataaattct 350 |||||||||||||||||||| Sbjct: 91451 aaagtgcaactataaattct 91470
>ref|XM_774871.1| PREDICTED: Strongylocentrotus purpuratus similar to Insulin-degrading enzyme (Insulysin) (Insulinase) (Insulin protease) (LOC574555), mRNA Length = 795 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gacgagatgacagaggaaga 64 |||||||||||||||||||| Sbjct: 331 gacgagatgacagaggaaga 350
>emb|AL627258.5| Zebrafish DNA sequence from clone RP71-1I8 in linkage group 6 Contains a CpG island, complete sequence Length = 138081 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 caaaagtgcaactataaattctat 352 |||||||||||| ||||||||||| Sbjct: 117404 caaaagtgcaacaataaattctat 117381
>emb|BX322612.8| Zebrafish DNA sequence from clone RP71-80O10 in linkage group 23, complete sequence Length = 158403 Score = 40.1 bits (20), Expect = 8.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 310 tggggaagattggagttggcaaaagtgcaact 341 ||||||| | ||||||||| |||||||||||| Sbjct: 19615 tggggaaaactggagttggaaaaagtgcaact 19584
>gb|AC008599.7| Homo sapiens chromosome 5 clone CTB-104P14, complete sequence Length = 89174 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccttgtctataaattggggg 132 |||||||||||||||||||| Sbjct: 70173 ccttgtctataaattggggg 70154
>gb|AC034220.5| Homo sapiens chromosome 5 clone CTD-2049H4, complete sequence Length = 146797 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccttgtctataaattggggg 132 |||||||||||||||||||| Sbjct: 121096 ccttgtctataaattggggg 121115
>ref|NM_078280.3| Caenorhabditis elegans OSMotic avoidance abnormal family member (osm-1) (osm-1) mRNA, complete cds Length = 5383 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 attggagttggcaaaagtgc 337 |||||||||||||||||||| Sbjct: 2228 attggagttggcaaaagtgc 2247
>gb|AC016766.6| Homo sapiens BAC clone RP11-558I6 from 2, complete sequence Length = 194374 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 catgacaaggttgagttgat 94 |||||||||||||||||||| Sbjct: 32531 catgacaaggttgagttgat 32512
>emb|BX571719.3| Zebrafish DNA sequence from clone DKEY-183C2 in linkage group 4, complete sequence Length = 111614 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 610 taaaaaccattacttctgtt 629 |||||||||||||||||||| Sbjct: 7396 taaaaaccattacttctgtt 7415
>emb|BX469931.8| Zebrafish DNA sequence from clone DKEY-108D22 in linkage group 4, complete sequence Length = 204487 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 606 cttctaaaaaccattacttctgtt 629 |||||||||| ||||||||||||| Sbjct: 50248 cttctaaaaagcattacttctgtt 50225
>gb|AE003434.4| Drosophila melanogaster chromosome X, section 18 of 74 of the complete sequence Length = 303928 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 aaagtgcaactataaattct 350 |||||||||||||||||||| Sbjct: 174759 aaagtgcaactataaattct 174740
>emb|CR381686.16| Zebrafish DNA sequence from clone CH211-179L5 in linkage group 24, complete sequence Length = 137127 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 actgatgcttttggtgcagc 394 |||||||||||||||||||| Sbjct: 2511 actgatgcttttggtgcagc 2492
>gb|L81611.1|HSL81611 Homo sapiens (subclone 5_f7 from P1 H17) DNA sequence, complete sequence Length = 2786 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccttgtctataaattggggg 132 |||||||||||||||||||| Sbjct: 1210 ccttgtctataaattggggg 1191
>gb|U41020.1| Caenorhabditis elegans cosmid T27B1, complete sequence Length = 27763 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 attggagttggcaaaagtgc 337 |||||||||||||||||||| Sbjct: 21971 attggagttggcaaaagtgc 21990 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,798,709 Number of Sequences: 3902068 Number of extensions: 5798709 Number of successful extensions: 114980 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 114779 Number of HSP's gapped (non-prelim): 195 length of query: 642 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 619 effective length of database: 17,143,297,704 effective search space: 10611701278776 effective search space used: 10611701278776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)