ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal29p17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK072081.1| Oryza sativa (japonica cultivar-group) cDNA clon... 692 0.0
2dbj|AK060388.1| Oryza sativa (japonica cultivar-group) cDNA clon... 692 0.0
3ref|NM_193993.1| Oryza sativa (japonica cultivar-group), predic... 363 4e-97
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 319 6e-84
5dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic D... 319 6e-84
6ref|NM_100172.2| Arabidopsis thaliana unknown protein AT1G02910 ... 72 2e-09
7emb|BX815720.1|CNS0ADV7 Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
8emb|BX813549.1|CNS0ADM3 Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
9gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 geno... 56 1e-04
10emb|BX816140.1|CNS0ADB7 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
11emb|AL359313.11| Human DNA sequence from clone RP1-321C2 on chro... 44 0.53
12gb|AY744675.1| Homo sapiens matrix metalloproteinase 10 (stromel... 42 2.1
13gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosom... 42 2.1
14emb|AL451136.11| Human DNA sequence from clone RP11-291L19 on ch... 42 2.1
15ref|XM_500221.1| Yarrowia lipolytica CLIB122, YALI0A18898g predi... 42 2.1
16gb|AF525010.1| Acacia galpinii psbA gene, partial sequence; psbA... 42 2.1
17gb|AF524971.1| Enterolobium contortisiliquum psbA gene, partial ... 42 2.1
18gb|AF524970.1| Ebenopsis ebano psbA gene, partial sequence; psbA... 42 2.1
19emb|Z99111.2|BSUB0008 Bacillus subtilis complete genome (section... 42 2.1
20emb|AL596169.1| Listeria innocua Clip11262 complete genome, segm... 42 2.1
21emb|CR931738.1| Medicago truncatula chromosome 5 clone mth2-56k1... 42 2.1
22gb|AF012285.1|AF012285 Bacillus subtilis mobA-nprE gene region 42 2.1
23gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, co... 42 2.1
24dbj|AP000647.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 2.1
25dbj|AP000619.5| Homo sapiens genomic DNA, chromosome 11 clone:CM... 42 2.1
26emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 42 2.1
27gb|AC154044.2| Drosophila melanogaster clone BACR32E02, complete... 40 8.2
28gb|BC094614.1| Mus musculus profilin family, member 4, mRNA (cDN... 40 8.2
29gb|AC079274.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.2
30gb|AC044804.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.2
31gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 8.2
32gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosom... 40 8.2
33gb|AC124381.4| Mus musculus BAC clone RP24-406E24 from chromosom... 40 8.2
34gb|AC127323.3| Mus musculus BAC clone RP23-242D19 from 18, compl... 40 8.2
35emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chr... 40 8.2
36emb|Z98254.1|DMC114E2 Drosophila melanogaster cosmid 114E2 40 8.2
37gb|AC087222.21| Homo sapiens chromosome 17, clone RP11-497H17, c... 40 8.2
38gb|AC130371.4| Homo sapiens chromosome 17, clone RP11-1197K16, c... 40 8.2
39dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.2
40gb|AE003428.4| Drosophila melanogaster chromosome X, section 12 ... 40 8.2
41gb|AF052173.1|AF052173 Homo sapiens clone 24417 mRNA sequence 40 8.2
42gb|S48551.1|S48551 {tandem repeat P1 monomer} [Cacatua goffini=g... 40 8.2

>dbj|AK072081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G03, full
           insert sequence
          Length = 1683

 Score =  692 bits (349), Expect = 0.0
 Identities = 541/605 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcggagtcgtgcgtcaacctcggcctcgagttcttctccaagggcagggtgaaggacgca 60
           |||||||||||||||||||| || |||||| ||||||||||||||||||||||||| || 
Sbjct: 255 gcggagtcgtgcgtcaacctgggactcgagctcttctccaagggcagggtgaaggatgct 314

                                                                       
Query: 61  cttgaacaatttgacaaggccctagagctgaatccaaatcctaccgaagcccaagcagcg 120
           |||||||||||||| || ||||||||||||||||||||||||   |||||||||||||| 
Sbjct: 315 cttgaacaatttgagaatgccctagagctgaatccaaatcctgttgaagcccaagcagca 374

                                                                       
Query: 121 ttctataacaaggcatgctgccatgcatacagggaagaaagcaaaaaagctgcagattgc 180
            | || || || ||||||||||||||||  |||||||||||||| |||||||||||||||
Sbjct: 375 ctatacaataaagcatgctgccatgcatttagggaagaaagcaacaaagctgcagattgc 434

                                                                       
Query: 181 ttgagaatagctttgcgagattacaatctcaaatttggcacagtacttaatgatccagac 240
           || || | |||| |||||||||| |||||||| ||||| ||  ||||||||||||| |||
Sbjct: 435 ttaaggacagctctgcgagattataatctcaagtttggtactatacttaatgatcctgac 494

                                                                       
Query: 241 atggcgccattcagggcatcaccagaatttaaggaacttcaagaggaggcattgcgtggt 300
            |||| || |||||||||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 495 ttggcaccgttcagggcatcaccggaattcaaggaacttcaagaagaggcattgcgtggt 554

                                                                       
Query: 301 ggagaagatattggttctggattccgaagagatctaaagcttattagtgaagtacaagca 360
           |||||||||||||||||||| ||||||||||| || || || ||||||||||||||||||
Sbjct: 555 ggagaagatattggttctgggttccgaagagacctgaaactcattagtgaagtacaagca 614

                                                                       
Query: 361 ccatttcgtggtgtccggaggttcttttatgtggcgttcattgcagcggctggaatttca 420
           ||||||||||||||||| |||||||||||||||||||| | |||||| ||||||||||||
Sbjct: 615 ccatttcgtggtgtccgaaggttcttttatgtggcgttaactgcagcagctggaatttca 674

                                                                       
Query: 421 acattctttaccattcccagacttatacttgcacttcaaggtggtgatggtgctccagat 480
           ||||||||||||||||| ||||||||||||||| |||||||||| |||||||| || |||
Sbjct: 675 acattctttaccattcctagacttatacttgcagttcaaggtggcgatggtgcccctgat 734

                                                                       
Query: 481 tttctggaaacggctgggaatgctgccattaatattggaggtattgttgtgctcgtggct 540
            | |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 735 ctgctggaaactgttgggaatgctgccatcaatattggaggtattgttgtgctcgtggct 794

                                                                       
Query: 541 ttatttgtctgggaaaacaagaaagaagaagagcagattacaaatatctctcgtaatgaa 600
           || | | ||||||||||||||||||||||  ||||||| ||| | || ||||| ||||||
Sbjct: 795 ttgtatttctgggaaaacaagaaagaagagcagcagatcacacaaatttctcgcaatgaa 854

                
Query: 601 accct 605
           |||||
Sbjct: 855 accct 859



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>dbj|AK060388.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-G10, full
           insert sequence
          Length = 1542

 Score =  692 bits (349), Expect = 0.0
 Identities = 541/605 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcggagtcgtgcgtcaacctcggcctcgagttcttctccaagggcagggtgaaggacgca 60
           |||||||||||||||||||| || |||||| ||||||||||||||||||||||||| || 
Sbjct: 257 gcggagtcgtgcgtcaacctgggactcgagctcttctccaagggcagggtgaaggatgct 316

                                                                       
Query: 61  cttgaacaatttgacaaggccctagagctgaatccaaatcctaccgaagcccaagcagcg 120
           |||||||||||||| || ||||||||||||||||||||||||   |||||||||||||| 
Sbjct: 317 cttgaacaatttgagaatgccctagagctgaatccaaatcctgttgaagcccaagcagca 376

                                                                       
Query: 121 ttctataacaaggcatgctgccatgcatacagggaagaaagcaaaaaagctgcagattgc 180
            | || || || ||||||||||||||||  |||||||||||||| |||||||||||||||
Sbjct: 377 ctatacaataaagcatgctgccatgcatttagggaagaaagcaacaaagctgcagattgc 436

                                                                       
Query: 181 ttgagaatagctttgcgagattacaatctcaaatttggcacagtacttaatgatccagac 240
           || || | |||| |||||||||| |||||||| ||||| ||  ||||||||||||| |||
Sbjct: 437 ttaaggacagctctgcgagattataatctcaagtttggtactatacttaatgatcctgac 496

                                                                       
Query: 241 atggcgccattcagggcatcaccagaatttaaggaacttcaagaggaggcattgcgtggt 300
            |||| || |||||||||||||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 497 ttggcaccgttcagggcatcaccggaattcaaggaacttcaagaagaggcattgcgtggt 556

                                                                       
Query: 301 ggagaagatattggttctggattccgaagagatctaaagcttattagtgaagtacaagca 360
           |||||||||||||||||||| ||||||||||| || || || ||||||||||||||||||
Sbjct: 557 ggagaagatattggttctgggttccgaagagacctgaaactcattagtgaagtacaagca 616

                                                                       
Query: 361 ccatttcgtggtgtccggaggttcttttatgtggcgttcattgcagcggctggaatttca 420
           ||||||||||||||||| |||||||||||||||||||| | |||||| ||||||||||||
Sbjct: 617 ccatttcgtggtgtccgaaggttcttttatgtggcgttaactgcagcagctggaatttca 676

                                                                       
Query: 421 acattctttaccattcccagacttatacttgcacttcaaggtggtgatggtgctccagat 480
           ||||||||||||||||| ||||||||||||||| |||||||||| |||||||| || |||
Sbjct: 677 acattctttaccattcctagacttatacttgcagttcaaggtggcgatggtgcccctgat 736

                                                                       
Query: 481 tttctggaaacggctgggaatgctgccattaatattggaggtattgttgtgctcgtggct 540
            | |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 737 ctgctggaaactgttgggaatgctgccatcaatattggaggtattgttgtgctcgtggct 796

                                                                       
Query: 541 ttatttgtctgggaaaacaagaaagaagaagagcagattacaaatatctctcgtaatgaa 600
           || | | ||||||||||||||||||||||  ||||||| ||| | || ||||| ||||||
Sbjct: 797 ttgtatttctgggaaaacaagaaagaagagcagcagatcacacaaatttctcgcaatgaa 856

                
Query: 601 accct 605
           |||||
Sbjct: 857 accct 861



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>ref|NM_193993.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 813

 Score =  363 bits (183), Expect = 4e-97
 Identities = 252/275 (91%)
 Strand = Plus / Plus

                                                                       
Query: 248 cattcagggcatcaccagaatttaaggaacttcaagaggaggcattgcgtggtggagaag 307
           |||| ||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 377 catttagggcatcaccggaattcaaggaacttcaagaagaggcattgcgtggtggagaag 436

                                                                       
Query: 308 atattggttctggattccgaagagatctaaagcttattagtgaagtacaagcaccatttc 367
           ||||||||||||| ||||||||||| || || || |||||||||||||||||||||||||
Sbjct: 437 atattggttctgggttccgaagagacctgaaactcattagtgaagtacaagcaccatttc 496

                                                                       
Query: 368 gtggtgtccggaggttcttttatgtggcgttcattgcagcggctggaatttcaacattct 427
           |||||||||| |||||||||||||||||||| | |||||| |||||||||||||||||||
Sbjct: 497 gtggtgtccgaaggttcttttatgtggcgttaactgcagcagctggaatttcaacattct 556

                                                                       
Query: 428 ttaccattcccagacttatacttgcacttcaaggtggtgatggtgctccagattttctgg 487
           |||||||||| ||||||||||||||| |||||||||| |||||||| || ||| | ||||
Sbjct: 557 ttaccattcctagacttatacttgcagttcaaggtggcgatggtgcccctgatctgctgg 616

                                              
Query: 488 aaacggctgggaatgctgccattaatattggaggt 522
           |||| | ||||||||||||||| ||||||||||||
Sbjct: 617 aaactgttgggaatgctgccatcaatattggaggt 651



 Score =  167 bits (84), Expect = 5e-38
 Identities = 132/148 (89%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcggagtcgtgcgtcaacctcggcctcgagttcttctccaagggcagggtgaaggacgca 60
           |||||||||||||||||||| || |||||| ||||||||||||||||||||||||| || 
Sbjct: 232 gcggagtcgtgcgtcaacctgggactcgagctcttctccaagggcagggtgaaggatgct 291

                                                                       
Query: 61  cttgaacaatttgacaaggccctagagctgaatccaaatcctaccgaagcccaagcagcg 120
           |||||||||||||| || ||||||||||||||||||||||||   |||||||||||||| 
Sbjct: 292 cttgaacaatttgagaatgccctagagctgaatccaaatcctgttgaagcccaagcagca 351

                                       
Query: 121 ttctataacaaggcatgctgccatgcat 148
            | || || || ||||||||||||||||
Sbjct: 352 ctatacaataaagcatgctgccatgcat 379



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  319 bits (161), Expect = 6e-84
 Identities = 218/237 (91%)
 Strand = Plus / Minus

                                                                            
Query: 287      aggcattgcgtggtggagaagatattggttctggattccgaagagatctaaagcttatta 346
                |||||||||||||||||||||||||||||||||| ||||||||||| || || || ||||
Sbjct: 14493237 aggcattgcgtggtggagaagatattggttctgggttccgaagagacctgaaactcatta 14493178

                                                                            
Query: 347      gtgaagtacaagcaccatttcgtggtgtccggaggttcttttatgtggcgttcattgcag 406
                ||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||
Sbjct: 14493177 gtgaagtacaagcaccatttcgtggtgtccgaaggttcttttatgtggcgttaactgcag 14493118

                                                                            
Query: 407      cggctggaatttcaacattctttaccattcccagacttatacttgcacttcaaggtggtg 466
                | ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |
Sbjct: 14493117 cagctggaatttcaacattctttaccattcctagacttatacttgcagttcaaggtggcg 14493058

                                                                         
Query: 467      atggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggta 523
                ||||||| || ||| | |||||||| | ||||||||||||||| |||||||||||||
Sbjct: 14493057 atggtgcccctgatctgctggaaactgttgggaatgctgccatcaatattggaggta 14493001



 Score =  143 bits (72), Expect = 8e-31
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                            
Query: 150      cagggaagaaagcaaaaaagctgcagattgcttgagaatagctttgcgagattacaatct 209
                ||||||||||||||| ||||||||||||||||| || | |||| |||||||||| |||||
Sbjct: 14493898 cagggaagaaagcaacaaagctgcagattgcttaaggacagctctgcgagattataatct 14493839

                                                                            
Query: 210      caaatttggcacagtacttaatgatccagacatggcgccattcagggcatcaccagaatt 269
                ||| ||||| ||  ||||||||||||| ||| |||| || |||||||||||||| |||||
Sbjct: 14493838 caagtttggtactatacttaatgatcctgacttggcaccgttcagggcatcaccggaatt 14493779

                                    
Query: 270      taaggaacttcaagaggagg 289
                 |||||||||||||| ||||
Sbjct: 14493778 caaggaacttcaagaagagg 14493759



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                            
Query: 48       ggtgaaggacgcacttgaacaatttgacaaggccctagagctgaatccaaatcctaccga 107
                ||||||||| || |||||||||||||| || ||||||||||||||||||||||||   ||
Sbjct: 14494086 ggtgaaggatgctcttgaacaatttgagaatgccctagagctgaatccaaatcctgttga 14494027

                                                         
Query: 108      agcccaagcagcgttctataacaaggcatgctgccatgcat 148
                ||||||||||||  | || || || ||||||||||||||||
Sbjct: 14494026 agcccaagcagcactatacaataaagcatgctgccatgcat 14493986



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                            
Query: 519      aggtattgttgtgctcgtggctttatttgtctgggaaaacaagaaagaagaagagcagat 578
                |||||||||||||||||||||||| | | ||||||||||||||||||||||  |||||||
Sbjct: 14492154 aggtattgttgtgctcgtggctttgtatttctgggaaaacaagaaagaagagcagcagat 14492095

                                           
Query: 579      tacaaatatctctcgtaatgaaaccct 605
                 ||| | || ||||| |||||||||||
Sbjct: 14492094 cacacaaatttctcgcaatgaaaccct 14492068



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                    
Query: 1        gcggagtcgtgcgtcaacctcggcctcgagttcttctccaagggcagggtga 52
                |||||||||||||||||||| || |||||| |||||||||||||||||||||
Sbjct: 14495756 gcggagtcgtgcgtcaacctgggactcgagctcttctccaagggcagggtga 14495705



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 383      tcttttatgtggcgttcatt 402
                ||||||||||||||||||||
Sbjct: 29973941 tcttttatgtggcgttcatt 29973922



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>dbj|AP003275.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0514H03
          Length = 167230

 Score =  319 bits (161), Expect = 6e-84
 Identities = 218/237 (91%)
 Strand = Plus / Minus

                                                                         
Query: 287   aggcattgcgtggtggagaagatattggttctggattccgaagagatctaaagcttatta 346
             |||||||||||||||||||||||||||||||||| ||||||||||| || || || ||||
Sbjct: 52550 aggcattgcgtggtggagaagatattggttctgggttccgaagagacctgaaactcatta 52491

                                                                         
Query: 347   gtgaagtacaagcaccatttcgtggtgtccggaggttcttttatgtggcgttcattgcag 406
             ||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||
Sbjct: 52490 gtgaagtacaagcaccatttcgtggtgtccgaaggttcttttatgtggcgttaactgcag 52431

                                                                         
Query: 407   cggctggaatttcaacattctttaccattcccagacttatacttgcacttcaaggtggtg 466
             | ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |
Sbjct: 52430 cagctggaatttcaacattctttaccattcctagacttatacttgcagttcaaggtggcg 52371

                                                                      
Query: 467   atggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggta 523
             ||||||| || ||| | |||||||| | ||||||||||||||| |||||||||||||
Sbjct: 52370 atggtgcccctgatctgctggaaactgttgggaatgctgccatcaatattggaggta 52314



 Score =  143 bits (72), Expect = 8e-31
 Identities = 123/140 (87%)
 Strand = Plus / Minus

                                                                         
Query: 150   cagggaagaaagcaaaaaagctgcagattgcttgagaatagctttgcgagattacaatct 209
             ||||||||||||||| ||||||||||||||||| || | |||| |||||||||| |||||
Sbjct: 53211 cagggaagaaagcaacaaagctgcagattgcttaaggacagctctgcgagattataatct 53152

                                                                         
Query: 210   caaatttggcacagtacttaatgatccagacatggcgccattcagggcatcaccagaatt 269
             ||| ||||| ||  ||||||||||||| ||| |||| || |||||||||||||| |||||
Sbjct: 53151 caagtttggtactatacttaatgatcctgacttggcaccgttcagggcatcaccggaatt 53092

                                 
Query: 270   taaggaacttcaagaggagg 289
              |||||||||||||| ||||
Sbjct: 53091 caaggaacttcaagaagagg 53072



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 88/101 (87%)
 Strand = Plus / Minus

                                                                         
Query: 48    ggtgaaggacgcacttgaacaatttgacaaggccctagagctgaatccaaatcctaccga 107
             ||||||||| || |||||||||||||| || ||||||||||||||||||||||||   ||
Sbjct: 53399 ggtgaaggatgctcttgaacaatttgagaatgccctagagctgaatccaaatcctgttga 53340

                                                      
Query: 108   agcccaagcagcgttctataacaaggcatgctgccatgcat 148
             ||||||||||||  | || || || ||||||||||||||||
Sbjct: 53339 agcccaagcagcactatacaataaagcatgctgccatgcat 53299



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                         
Query: 519   aggtattgttgtgctcgtggctttatttgtctgggaaaacaagaaagaagaagagcagat 578
             |||||||||||||||||||||||| | | ||||||||||||||||||||||  |||||||
Sbjct: 51467 aggtattgttgtgctcgtggctttgtatttctgggaaaacaagaaagaagagcagcagat 51408

                                        
Query: 579   tacaaatatctctcgtaatgaaaccct 605
              ||| | || ||||| |||||||||||
Sbjct: 51407 cacacaaatttctcgcaatgaaaccct 51381



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                 
Query: 1     gcggagtcgtgcgtcaacctcggcctcgagttcttctccaagggcagggtga 52
             |||||||||||||||||||| || |||||| |||||||||||||||||||||
Sbjct: 55069 gcggagtcgtgcgtcaacctgggactcgagctcttctccaagggcagggtga 55018



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>ref|NM_100172.2| Arabidopsis thaliana unknown protein AT1G02910 mRNA, complete cds
          Length = 1557

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 463 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 522
           ||||||||||||||| || ||||||||||  | || |||||||| ||||| |||||||||
Sbjct: 708 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggaggt 767

                   
Query: 523 attgttgt 530
           ||||||||
Sbjct: 768 attgttgt 775



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>emb|BX815720.1|CNS0ADV7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS88ZA05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1574

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 463 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 522
           ||||||||||||||| || ||||||||||  | || |||||||| ||||| |||||||||
Sbjct: 725 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggaggt 784

                   
Query: 523 attgttgt 530
           ||||||||
Sbjct: 785 attgttgt 792



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>emb|BX813549.1|CNS0ADM3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB23ZG01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1514

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                       
Query: 463 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 522
           ||||||||||||||| || ||||||||||  | || |||||||| ||||| |||||||||
Sbjct: 696 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggaggt 755

                   
Query: 523 attgttgt 530
           ||||||||
Sbjct: 756 attgttgt 763



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>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete
             sequence
          Length = 100239

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 463   ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggaggt 522
             ||||||||||||||| || ||||||||||  | || |||||||| ||||| |||||||||
Sbjct: 35593 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggaggt 35652



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>emb|BX816140.1|CNS0ADB7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH30ZC04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1492

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                     
Query: 463 ggtgatggtgctccagattttctggaaacggctgggaatgctgccattaatattggag 520
           ||||||||||||||| || ||||||||||  | || |||||||| ||||| |||||||
Sbjct: 672 ggtgatggtgctccaaatcttctggaaactacgggaaatgctgcaattaacattggag 729



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>emb|AL359313.11| Human DNA sequence from clone RP1-321C2 on chromosome 6 Contains part
             of novel gene, complete sequence
          Length = 52461

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 566   aagaagagcagattacaaatat 587
             ||||||||||||||||||||||
Sbjct: 22746 aagaagagcagattacaaatat 22767



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>gb|AY744675.1| Homo sapiens matrix metalloproteinase 10 (stromelysin 2) (MMP10)
            gene, complete cds
          Length = 13828

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 539  ctttatttgtctgggaaaacaagaaagaa 567
            ||||||||| ||| |||||||||||||||
Sbjct: 1101 ctttatttggctgagaaaacaagaaagaa 1129



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>gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosome 9, complete sequence
          Length = 162530

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 448   cttgcacttcaaggtggtgat 468
             |||||||||||||||||||||
Sbjct: 60272 cttgcacttcaaggtggtgat 60292



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>emb|AL451136.11| Human DNA sequence from clone RP11-291L19 on chromosome 1 Contains the 5'
              end of the TESK2 gene for testis-specific kinase 2, a
              peptidylprolyl isomerase A (cyclophilin A) (PPIA)
              pseudogene, a novel gene, a novel gene (DKFZP564I122) and
              the 3' end of the PRDX1 gene for peroxiredoxin 1, complete
              sequence
          Length = 137143

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 146    catacagggaagaaagcaaaaaagc 170
              |||||||||||||||||| ||||||
Sbjct: 102678 catacagggaagaaagcataaaagc 102702



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>ref|XM_500221.1| Yarrowia lipolytica CLIB122, YALI0A18898g predicted mRNA
          Length = 1407

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 12   cgtcaacctcggcctcgagttcttc 36
            ||||||||||||||||| |||||||
Sbjct: 1030 cgtcaacctcggcctcgggttcttc 1006



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>gb|AF525010.1| Acacia galpinii psbA gene, partial sequence; psbA-trnH intergenic
           spacer, complete sequence; and tRNA-His (trnH) gene,
           partial sequence; chloroplast genes for chloroplast
           products
          Length = 487

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 415 atttcaacattctttaccatt 435
           |||||||||||||||||||||
Sbjct: 186 atttcaacattctttaccatt 206



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>gb|AF524971.1| Enterolobium contortisiliquum psbA gene, partial sequence;
           psbA-trnH intergenic spacer, complete sequence; and
           tRNA-His (trnH) gene, partial sequence; chloroplast
           genes for chloroplast products
          Length = 483

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 415 atttcaacattctttaccatt 435
           |||||||||||||||||||||
Sbjct: 187 atttcaacattctttaccatt 207



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>gb|AF524970.1| Ebenopsis ebano psbA gene, partial sequence; psbA-trnH intergenic
           spacer, complete sequence; and tRNA-His (trnH) gene,
           partial sequence; chloroplast genes for chloroplast
           products
          Length = 454

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 415 atttcaacattctttaccatt 435
           |||||||||||||||||||||
Sbjct: 186 atttcaacattctttaccatt 206



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>emb|Z99111.2|BSUB0008 Bacillus subtilis complete genome (section 8 of 21): from 1410943 to
              1602922
          Length = 191980

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 556    aacaagaaagaagaagagcagatta 580
              ||||||||| |||||||||||||||
Sbjct: 101500 aacaagaaaaaagaagagcagatta 101524



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>emb|AL596169.1| Listeria innocua Clip11262 complete genome, segment 7/12
          Length = 239050

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 195    gcgagattacaatctcaaatt 215
              |||||||||||||||||||||
Sbjct: 179238 gcgagattacaatctcaaatt 179258



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>emb|CR931738.1| Medicago truncatula chromosome 5 clone mth2-56k10, COMPLETE SEQUENCE
          Length = 132450

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 416   tttcaacattctttaccattc 436
             |||||||||||||||||||||
Sbjct: 98223 tttcaacattctttaccattc 98203



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>gb|AF012285.1|AF012285 Bacillus subtilis mobA-nprE gene region
          Length = 46864

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 556   aacaagaaagaagaagagcagatta 580
             ||||||||| |||||||||||||||
Sbjct: 18238 aacaagaaaaaagaagagcagatta 18262



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>gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, complete sequence
          Length = 192542

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 484    ctggaaacggctgggaatgct 504
              |||||||||||||||||||||
Sbjct: 108998 ctggaaacggctgggaatgct 108978



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>dbj|AP000647.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-75I23, complete
             sequence
          Length = 118818

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 539   ctttatttgtctgggaaaacaagaaagaa 567
             ||||||||| ||| |||||||||||||||
Sbjct: 82252 ctttatttggctgagaaaacaagaaagaa 82224



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>dbj|AP000619.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-42C6, complete
             sequence
          Length = 103181

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 539   ctttatttgtctgggaaaacaagaaagaa 567
             ||||||||| ||| |||||||||||||||
Sbjct: 33030 ctttatttggctgagaaaacaagaaagaa 33002



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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 12      cgtcaacctcggcctcgagttcttc 36
               ||||||||||||||||| |||||||
Sbjct: 2033742 cgtcaacctcggcctcgggttcttc 2033718



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>gb|AC154044.2| Drosophila melanogaster clone BACR32E02, complete sequence
          Length = 186002

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 561   gaaagaagaagagcagatta 580
             ||||||||||||||||||||
Sbjct: 64689 gaaagaagaagagcagatta 64708



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>gb|BC094614.1| Mus musculus profilin family, member 4, mRNA (cDNA clone
            IMAGE:6852241), with apparent retained intron
          Length = 4800

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 546  tgtctgggaaaacaagaaagaagaagag 573
            ||||| ||||||||| ||||||||||||
Sbjct: 2925 tgtctcggaaaacaaaaaagaagaagag 2952



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>gb|AC079274.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-142L8, complete
             sequence
          Length = 113724

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 571   gagcagattacaaatatctc 590
             ||||||||||||||||||||
Sbjct: 98663 gagcagattacaaatatctc 98682



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>gb|AC044804.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-15K8, complete
            sequence
          Length = 253000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 571  gagcagattacaaatatctc 590
            ||||||||||||||||||||
Sbjct: 6173 gagcagattacaaatatctc 6192



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>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome
          Length = 1827111

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 414     aatttcaacattctttacca 433
               ||||||||||||||||||||
Sbjct: 1620363 aatttcaacattctttacca 1620344



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>gb|AC139886.3| Mus musculus BAC clone RP23-120M10 from chromosome 15, complete sequence
          Length = 211336

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 551    gggaaaacaagaaagaagaa 570
              ||||||||||||||||||||
Sbjct: 190564 gggaaaacaagaaagaagaa 190583



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>gb|AC124381.4| Mus musculus BAC clone RP24-406E24 from chromosome 15, complete
             sequence
          Length = 176561

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 551   gggaaaacaagaaagaagaa 570
             ||||||||||||||||||||
Sbjct: 14730 gggaaaacaagaaagaagaa 14749



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>gb|AC127323.3| Mus musculus BAC clone RP23-242D19 from 18, complete sequence
          Length = 208152

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 470    gtgctccagattttctggaa 489
              ||||||||||||||||||||
Sbjct: 150919 gtgctccagattttctggaa 150900



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>emb|AL354853.12| Human DNA sequence from clone RP11-555F9 on chromosome 9q22.1-22.33
             Contains the 5' end of a novel gene and the 3' end of a
             novel gene, complete sequence
          Length = 176422

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 472   gctccagattttctggaaac 491
             ||||||||||||||||||||
Sbjct: 42405 gctccagattttctggaaac 42386



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>emb|Z98254.1|DMC114E2 Drosophila melanogaster cosmid 114E2
          Length = 37467

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 561   gaaagaagaagagcagatta 580
             ||||||||||||||||||||
Sbjct: 27973 gaaagaagaagagcagatta 27992



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>gb|AC087222.21| Homo sapiens chromosome 17, clone RP11-497H17, complete sequence
          Length = 70000

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 563   aagaagaagagcagattaca 582
             ||||||||||||||||||||
Sbjct: 60996 aagaagaagagcagattaca 60977



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>gb|AC130371.4| Homo sapiens chromosome 17, clone RP11-1197K16, complete sequence
          Length = 195613

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 563    aagaagaagagcagattaca 582
              ||||||||||||||||||||
Sbjct: 189864 aagaagaagagcagattaca 189883



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>dbj|AP003453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0480C01
          Length = 151100

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 383    tcttttatgtggcgttcatt 402
              ||||||||||||||||||||
Sbjct: 118499 tcttttatgtggcgttcatt 118480



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>gb|AE003428.4| Drosophila melanogaster chromosome X, section 12 of 74 of the complete
              sequence
          Length = 203546

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    gaaagaagaagagcagatta 580
              ||||||||||||||||||||
Sbjct: 115241 gaaagaagaagagcagatta 115222



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>gb|AF052173.1|AF052173 Homo sapiens clone 24417 mRNA sequence
          Length = 1545

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 563  aagaagaagagcagattaca 582
            ||||||||||||||||||||
Sbjct: 1071 aagaagaagagcagattaca 1052



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>gb|S48551.1|S48551 {tandem repeat P1 monomer} [Cacatua goffini=goffins cockatoo,
           Genomic, 195 nt]
          Length = 195

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 552 ggaaaacaagaaagaagaag 571
           ||||||||||||||||||||
Sbjct: 14  ggaaaacaagaaagaagaag 33


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,295,932
Number of Sequences: 3902068
Number of extensions: 6295932
Number of successful extensions: 134348
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134189
Number of HSP's gapped (non-prelim): 159
length of query: 605
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 582
effective length of database: 17,143,297,704
effective search space: 9977399263728
effective search space used: 9977399263728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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