ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal29n24 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X57408.1|TAPSB0 Wheat PsbO mRNA for 33kDa oxygen evolving protein of photosystem II Length = 1217 Score = 902 bits (455), Expect = 0.0 Identities = 535/557 (96%), Gaps = 6/557 (1%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 180 ggtcgcaagcaagtgcgccgacgccgccaag-atggccggcttcgccctcgccacctctg 238 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 ||||||||||||| ||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 239 ccctcctcgtctccggcgcgacggcggagggggcgcccaagaggctgaccttcgacgaga 298 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 358 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 418 Query: 242 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccgg 301 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 419 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccgccgc 478 Query: 302 ccttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcc 361 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 479 gcttccagaagaccaagctcatgacccgtctcacctacacccttgacgagatggaaggcc 538 Query: 362 cgctcgaggt-cggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactac 420 |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 539 cgctcgaggtacggcgccgacgg-accctcaagttcgaggagaaggacggcatcgactac 597 Query: 421 gcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaag 480 ||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 598 gcggccgtcaccgtgcagctccccggaggcgagcgcgttgccttcctcttcaccgtcaag 657 Query: 481 cagctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctac 540 ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 658 cagctcgtcgccaccggcaagcccgagagcttca---ggcccttcctcgtgcccagctac 714 Query: 541 aggggttcctctttcct 557 |||||||| |||||||| Sbjct: 715 aggggttcgtctttcct 731
>ref|NM_193698.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1002 Score = 557 bits (281), Expect = e-155 Identities = 488/556 (87%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 174 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 232 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 | || |||||||| ||||| || |||||||| | ||| | |||||| ||||||||||| | Sbjct: 233 ctctgctcgtctcgggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgaga 292 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 293 ttcagagtaagacgtacatggaggtgaagggaaccggcacggcgaaccagtgcccgacgg 352 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 241 | || |||||||||||||||||| |||||||||||||||||||| | ||||||||||||| Sbjct: 353 tggagggcggcgtcgactccttcgccttcaaggccggcaagtacaacatgaagaagttct 412 Query: 242 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccgg 301 |||||||||| || ||||||||||| ||||| |||||| | ||||||| |||||| | Sbjct: 413 gcctggagccgacgtccttcaccgttaaggcggagggcgtggccaagaacgcgccacccg 472 Query: 302 ccttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcc 361 |||||||||||||||||||||||||| || || |||||||| |||||||| || |||| Sbjct: 473 agttccagaagaccaagctcatgacccgcctgacctacaccctcgacgagatcgagggcc 532 Query: 362 cgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacg 421 ||||||||||| || ||||||| ||| |||||||||||||||||||||| |||||||||| Sbjct: 533 cgctcgaggtcagctccgacggaaccatcaagttcgaggagaaggacggaatcgactacg 592 Query: 422 cggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagc 481 | |||||||| |||||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 593 ccgccgtcaccgtgcagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaaga 652 Query: 482 agctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctaca 541 | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 653 atctggtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctacc 712 Query: 542 ggggttcctctttcct 557 | ||||| || ||||| Sbjct: 713 gtggttcgtccttcct 728
>dbj|AK119188.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G10, full insert sequence Length = 1217 Score = 557 bits (281), Expect = e-155 Identities = 488/556 (87%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 246 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 304 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 | || |||||||| ||||| || |||||||| | ||| | |||||| ||||||||||| | Sbjct: 305 ctctgctcgtctcgggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgaga 364 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 365 ttcagagtaagacgtacatggaggtgaagggaaccggcacggcgaaccagtgcccgacgg 424 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 241 | || |||||||||||||||||| |||||||||||||||||||| | ||||||||||||| Sbjct: 425 tggagggcggcgtcgactccttcgccttcaaggccggcaagtacaacatgaagaagttct 484 Query: 242 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccgg 301 |||||||||| || ||||||||||| ||||| |||||| | ||||||| |||||| | Sbjct: 485 gcctggagccgacgtccttcaccgttaaggcggagggcgtggccaagaacgcgccacccg 544 Query: 302 ccttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcc 361 |||||||||||||||||||||||||| || || |||||||| |||||||| || |||| Sbjct: 545 agttccagaagaccaagctcatgacccgcctgacctacaccctcgacgagatcgagggcc 604 Query: 362 cgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacg 421 ||||||||||| || ||||||| ||| |||||||||||||||||||||| |||||||||| Sbjct: 605 cgctcgaggtcagctccgacggaaccatcaagttcgaggagaaggacggaatcgactacg 664 Query: 422 cggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagc 481 | |||||||| |||||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 665 ccgccgtcaccgtgcagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaaga 724 Query: 482 agctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctaca 541 | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 725 atctggtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctacc 784 Query: 542 ggggttcctctttcct 557 | ||||| || ||||| Sbjct: 785 gtggttcgtccttcct 800
>dbj|AK104760.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G12, full insert sequence Length = 1292 Score = 557 bits (281), Expect = e-155 Identities = 488/556 (87%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 243 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 301 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 | || |||||||| ||||| || |||||||| | ||| | |||||| ||||||||||| | Sbjct: 302 ctctgctcgtctcgggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgaga 361 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 362 ttcagagtaagacgtacatggaggtgaagggaaccggcacggcgaaccagtgcccgacgg 421 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 241 | || |||||||||||||||||| |||||||||||||||||||| | ||||||||||||| Sbjct: 422 tggagggcggcgtcgactccttcgccttcaaggccggcaagtacaacatgaagaagttct 481 Query: 242 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccgg 301 |||||||||| || ||||||||||| ||||| |||||| | ||||||| |||||| | Sbjct: 482 gcctggagccgacgtccttcaccgttaaggcggagggcgtggccaagaacgcgccacccg 541 Query: 302 ccttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcc 361 |||||||||||||||||||||||||| || || |||||||| |||||||| || |||| Sbjct: 542 agttccagaagaccaagctcatgacccgcctgacctacaccctcgacgagatcgagggcc 601 Query: 362 cgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacg 421 ||||||||||| || ||||||| ||| |||||||||||||||||||||| |||||||||| Sbjct: 602 cgctcgaggtcagctccgacggaaccatcaagttcgaggagaaggacggaatcgactacg 661 Query: 422 cggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagc 481 | |||||||| |||||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 662 ccgccgtcaccgtgcagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaaga 721 Query: 482 agctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctaca 541 | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 722 atctggtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctacc 781 Query: 542 ggggttcctctttcct 557 | ||||| || ||||| Sbjct: 782 gtggttcgtccttcct 797
>dbj|AK104649.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B02, full insert sequence Length = 1272 Score = 557 bits (281), Expect = e-155 Identities = 488/556 (87%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 223 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 281 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 | || |||||||| ||||| || |||||||| | ||| | |||||| ||||||||||| | Sbjct: 282 ctctgctcgtctcgggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgaga 341 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 342 ttcagagtaagacgtacatggaggtgaagggaaccggcacggcgaaccagtgcccgacgg 401 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 241 | || |||||||||||||||||| |||||||||||||||||||| | ||||||||||||| Sbjct: 402 tggagggcggcgtcgactccttcgccttcaaggccggcaagtacaacatgaagaagttct 461 Query: 242 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccgg 301 |||||||||| || ||||||||||| ||||| |||||| | ||||||| |||||| | Sbjct: 462 gcctggagccgacgtccttcaccgttaaggcggagggcgtggccaagaacgcgccacccg 521 Query: 302 ccttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcc 361 |||||||||||||||||||||||||| || || |||||||| |||||||| || |||| Sbjct: 522 agttccagaagaccaagctcatgacccgcctgacctacaccctcgacgagatcgagggcc 581 Query: 362 cgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacg 421 ||||||||||| || ||||||| ||| |||||||||||||||||||||| |||||||||| Sbjct: 582 cgctcgaggtcagctccgacggaaccatcaagttcgaggagaaggacggaatcgactacg 641 Query: 422 cggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagc 481 | |||||||| |||||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 642 ccgccgtcaccgtgcagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaaga 701 Query: 482 agctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctaca 541 | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 702 atctggtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctacc 761 Query: 542 ggggttcctctttcct 557 | ||||| || ||||| Sbjct: 762 gtggttcgtccttcct 777
>dbj|AK104080.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-A06, full insert sequence Length = 1159 Score = 557 bits (281), Expect = e-155 Identities = 488/556 (87%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 223 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 281 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 | || |||||||| ||||| || |||||||| | ||| | |||||| ||||||||||| | Sbjct: 282 ctctgctcgtctcgggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgaga 341 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 342 ttcagagtaagacgtacatggaggtgaagggaaccggcacggcgaaccagtgcccgacgg 401 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 241 | || |||||||||||||||||| |||||||||||||||||||| | ||||||||||||| Sbjct: 402 tggagggcggcgtcgactccttcgccttcaaggccggcaagtacaacatgaagaagttct 461 Query: 242 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccgg 301 |||||||||| || ||||||||||| ||||| |||||| | ||||||| |||||| | Sbjct: 462 gcctggagccgacgtccttcaccgttaaggcggagggcgtggccaagaacgcgccacccg 521 Query: 302 ccttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcc 361 |||||||||||||||||||||||||| || || |||||||| |||||||| || |||| Sbjct: 522 agttccagaagaccaagctcatgacccgcctgacctacaccctcgacgagatcgagggcc 581 Query: 362 cgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacg 421 ||||||||||| || ||||||| ||| |||||||||||||||||||||| |||||||||| Sbjct: 582 cgctcgaggtcagctccgacggaaccatcaagttcgaggagaaggacggaatcgactacg 641 Query: 422 cggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagc 481 | |||||||| |||||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 642 ccgccgtcaccgtgcagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaaga 701 Query: 482 agctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctaca 541 | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 702 atctggtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctacc 761 Query: 542 ggggttcctctttcct 557 | ||||| || ||||| Sbjct: 762 gtggttcgtccttcct 777
>gb|AY109341.1| Zea mays CL4601_3 mRNA sequence Length = 1460 Score = 551 bits (278), Expect = e-154 Identities = 413/458 (90%) Strand = Plus / Plus Query: 100 aagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggc 159 ||||||||||||| |||||| ||||||||||| || ||||||||||||||||| || ||| Sbjct: 593 aagaggctgacctacgacgagatccagagcaaaacgtacatggaggtgaagggcacgggc 652 Query: 160 accgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggc 219 || |||||||||||||||||||||||||||||||| || || ||||| |||||||||||| Sbjct: 653 acggcgaaccagtgcccgaccatcgacggcggcgtggagtcgttcccgttcaaggccggc 712 Query: 220 aagtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggc 279 |||||| ||||||||||| | ||||||||||| || ||||||||||||||||| |||||| Sbjct: 713 aagtaccagatgaagaagctgtgcctggagccgacgtccttcaccgtcaaggcggagggc 772 Query: 280 atccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttac 339 ||| ||||||| || || | |||||||||||||||||||||||||| ||||| ||| Sbjct: 773 atcgccaagaacgccccgcccgagttccagaagaccaagctcatgacccgcctcacgtac 832 Query: 340 acccttgacgagatggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgag 399 || || |||||||| || |||||||||||||||||| |||||||||| |||||||||||| Sbjct: 833 acgctggacgagatcgagggcccgctcgaggtcggctccgacggcacgctcaagttcgag 892 Query: 400 gagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtg 459 ||||||||||||||||||||||| |||||||| ||||||||||| | |||||||||||| Sbjct: 893 gagaaggacggcatcgactacgccgccgtcaccgtgcagctcccggcgggcgagcgcgtg 952 Query: 460 ccgttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagcttcagcggg 519 |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| Sbjct: 953 ccgttcctcttcaccgtcaagcagctcgtcgccaccggcaagcccgagagcttcggcggg 1012 Query: 520 cccttcctcgtgcccagctacaggggttcctctttcct 557 ||||||||||||||||||||| | || ||||| ||||| Sbjct: 1013 cccttcctcgtgcccagctaccgtggctcctccttcct 1050 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/70 (84%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 3 gtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctgc 62 ||||| |||| ||||| ||||||||| ||| | ||||||||||| ||||| ||||| || Sbjct: 497 gtcgccagcaggtgcgtcgacgccgcgaagc-tcgccggcttcgcgctcgccacctcggc 555 Query: 63 cctcctcgtc 72 ||||||||| Sbjct: 556 gctcctcgtc 565
>dbj|AK119515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D11, full insert sequence Length = 1286 Score = 549 bits (277), Expect = e-153 Identities = 487/556 (87%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 239 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 297 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 | || |||||||| ||||| || |||||||| | ||| | |||||| ||||||||||| | Sbjct: 298 ctctgctcgtctcgggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgaga 357 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 358 ttcagagtaagacgtacatggaggtgaagggaaccggcacggcgaaccagtgcccgacgg 417 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 241 | || |||||||||||||||||| ||||||||||| |||||||| | ||||||||||||| Sbjct: 418 tggagggcggcgtcgactccttcgccttcaaggccagcaagtacaacatgaagaagttct 477 Query: 242 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccgg 301 |||||||||| || ||||||||||| ||||| |||||| | ||||||| |||||| | Sbjct: 478 gcctggagccgacgtccttcaccgttaaggcggagggcgtggccaagaacgcgccacccg 537 Query: 302 ccttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcc 361 |||||||||||||||||||||||||| || || |||||||| |||||||| || |||| Sbjct: 538 agttccagaagaccaagctcatgacccgcctgacctacaccctcgacgagatcgagggcc 597 Query: 362 cgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacg 421 ||||||||||| || ||||||| ||| |||||||||||||||||||||| |||||||||| Sbjct: 598 cgctcgaggtcagctccgacggaaccatcaagttcgaggagaaggacggaatcgactacg 657 Query: 422 cggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagc 481 | |||||||| |||||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 658 ccgccgtcaccgtgcagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaaga 717 Query: 482 agctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctaca 541 | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 718 atctggtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctacc 777 Query: 542 ggggttcctctttcct 557 | ||||| || ||||| Sbjct: 778 gtggttcgtccttcct 793
>dbj|AK103920.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B04, full insert sequence Length = 1313 Score = 549 bits (277), Expect = e-153 Identities = 487/556 (87%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 226 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 284 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 | || |||||||| ||||| || |||||||| | ||| | |||||| ||||||||||| | Sbjct: 285 ctctgctcgtctcgggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgaga 344 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 345 ttcagagtaagacgtacatggaggtgaagggaaccggcacggcgaaccagtgcccgacgg 404 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 241 | || |||||||||||||||||| |||||||||||||||||||| | ||||||||||||| Sbjct: 405 tggagggcggcgtcgactccttcgccttcaaggccggcaagtacaacatgaagaagttct 464 Query: 242 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccgg 301 |||||||||| || ||||||||||| ||||| |||||| | ||||||| |||||| | Sbjct: 465 gcctggagccgacgtccttcaccgttaaggcggagggcgtggccaagaacgcgccacccg 524 Query: 302 ccttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcc 361 |||||||||||||||||||||||||| || || |||||||| |||||||| || |||| Sbjct: 525 agttccagaagaccaagctcatgacccgcctgacctacaccctcgacgagatcgagggcc 584 Query: 362 cgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacg 421 ||||||||||| || | ||||| ||| |||||||||||||||||||||| |||||||||| Sbjct: 585 cgctcgaggtcagctctgacggaaccatcaagttcgaggagaaggacggaatcgactacg 644 Query: 422 cggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagc 481 | |||||||| |||||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 645 ccgccgtcaccgtgcagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaaga 704 Query: 482 agctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctaca 541 | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 705 atctggtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctacc 764 Query: 542 ggggttcctctttcct 557 | ||||| || ||||| Sbjct: 765 gtggttcgtccttcct 780
>dbj|AK067715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119C03, full insert sequence Length = 1332 Score = 549 bits (277), Expect = e-153 Identities = 487/556 (87%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 248 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 306 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 | || |||||||| ||||| || |||||||| | ||| | |||||| ||||||||||| | Sbjct: 307 ctctgctcgtctcgggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgaga 366 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 367 ttcagagtaagacgtacatggaggtgaagggaaccggcacggcgaaccagtgcccgacgg 426 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 241 | || |||||||||||||||||| |||||||||||||||||||| | ||||||||||||| Sbjct: 427 tggagggcggcgtcgactccttcgccttcaaggccggcaagtacaacatgaagaagttct 486 Query: 242 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccgg 301 |||||||||| || ||||||||||| ||||| |||||| | ||||||| |||||| | Sbjct: 487 gcctggagccgacgtccttcaccgttaaggcggagggcgtggccaagaacgcgccacccg 546 Query: 302 ccttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcc 361 |||||||||||||||||||||||||| || || |||||||| |||||||| || |||| Sbjct: 547 agttccagaagaccaagctcatgacccgcctgacctacaccctcgacgagatcgagggcc 606 Query: 362 cgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacg 421 ||||||||||| || ||||||| ||| |||||||||||||||| ||||| |||||||||| Sbjct: 607 cgctcgaggtcagctccgacggaaccatcaagttcgaggagaatgacggaatcgactacg 666 Query: 422 cggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagc 481 | |||||||| |||||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 667 ccgccgtcaccgtgcagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaaga 726 Query: 482 agctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctaca 541 | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 727 atctggtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctacc 786 Query: 542 ggggttcctctttcct 557 | ||||| || ||||| Sbjct: 787 gtggttcgtccttcct 802
>dbj|AK103937.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G02, full insert sequence Length = 1290 Score = 541 bits (273), Expect = e-151 Identities = 486/556 (87%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 243 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 301 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 | || |||||||| ||||| || |||||||| | ||| | |||||| ||||||||||| | Sbjct: 302 ctctgctcgtctcgggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgaga 361 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 362 ttcagagtaagacgtacatggaggtgaagggaaccggcacggcgaaccagtgcccgacgg 421 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 241 | || |||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 422 tggagggcggcgtcgactccttcgccttcaaggccggcaagtacagcatgaagaagttct 481 Query: 242 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccgg 301 |||||||||| || ||||||||||| ||||| |||||| | ||||||| |||||| | Sbjct: 482 gcctggagccgacgtccttcaccgttaaggcggagggcgtggccaagaacgcgccacccg 541 Query: 302 ccttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcc 361 |||||||||||||||||||||||||| || || |||||||| |||||||| || |||| Sbjct: 542 agttccagaagaccaagctcatgacccgcctgacctacaccctcgacgagatcgagggcc 601 Query: 362 cgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacg 421 ||||||||||| || ||||||| ||| |||||||||||||||||||||| |||||||||| Sbjct: 602 cgctcgaggtcagctccgacggaaccatcaagttcgaggagaaggacggaatcgactacg 661 Query: 422 cggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagc 481 | |||||||| |||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 662 ccgccgtcaccgtgcagctgctgggaggcgagcgcgtgccgttcctcttcaccatcaaga 721 Query: 482 agctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctaca 541 | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 722 atctggtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctacc 781 Query: 542 ggggttcctctttcct 557 | ||||| || ||||| Sbjct: 782 gtggttcgtccttcct 797
>dbj|AK060886.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B05, full insert sequence Length = 1208 Score = 541 bits (273), Expect = e-151 Identities = 486/556 (87%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 243 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 301 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 | || |||||||| ||||| || |||||||| | ||| | |||||| ||||||||||| | Sbjct: 302 ctctgctcgtctcgggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgaga 361 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 362 ttcagagtaagacgtacatggaggtgaagggaaccggcacggcgaaccagtgcccgacgg 421 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 241 | || |||||||||||||||||| |||||||||||||||||||| | ||||||||||||| Sbjct: 422 tggagggcggcgtcgactccttcgccttcaaggccggcaagtacaacatgaagaagttct 481 Query: 242 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccgg 301 |||||||||| || ||||||||||| ||||| |||||| | ||||||| | |||| | Sbjct: 482 gcctggagccgacgtccttcaccgttaaggcggagggcgtggccaagaacgcgtcacccg 541 Query: 302 ccttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcc 361 |||||||||||||||||||||||||| || || |||||||| |||||||| | |||| Sbjct: 542 agttccagaagaccaagctcatgacccgcctgacctacaccctcgacgagatcaagggcc 601 Query: 362 cgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacg 421 ||||||||||| || ||||||| ||| |||||||||||||||||||||| |||||||||| Sbjct: 602 cgctcgaggtcagctccgacggaaccatcaagttcgaggagaaggacggaatcgactacg 661 Query: 422 cggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagc 481 | |||||||| |||||||| || |||||||||||||||||||||||||||||| ||||| Sbjct: 662 ccgccgtcaccgtgcagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaaga 721 Query: 482 agctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctaca 541 | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 722 atctggtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctacc 781 Query: 542 ggggttcctctttcct 557 | ||||| || ||||| Sbjct: 782 gtggttcgtccttcct 797
>dbj|AK119163.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D09, full insert sequence Length = 1293 Score = 533 bits (269), Expect = e-148 Identities = 486/556 (87%), Gaps = 2/556 (0%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 247 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 305 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 | || |||||| | ||||| || |||||||| | ||| | |||||| ||||||||||| | Sbjct: 306 ctctgctcgtc-cgggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgaga 364 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 365 ttcagagtaagacgtacatggaggtgaagggaaccggcacggcgaaccagtgcccgacgg 424 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttct 241 | || |||||||||||||||||| |||||||||||||||||||| | ||||||||||||| Sbjct: 425 tggagggcggcgtcgactccttcgccttcaaggccggcaagtacaacatgaagaagttct 484 Query: 242 gcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccgg 301 |||||||||| || ||||||||||| ||||| |||||| | ||||||| |||||| | Sbjct: 485 gcctggagccgacgtccttcaccgttaaggcggagggcgtggccaagaacgcgccacccg 544 Query: 302 ccttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcc 361 |||||||||||||||||||||||||| || || |||||||| |||||||| || |||| Sbjct: 545 agttccagaagaccaagctcatgacccgcctgacctacaccctcgacgagatcgagggcc 604 Query: 362 cgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacg 421 ||||||||||| || ||||||| ||| |||||||||||||||||||||| |||||||||| Sbjct: 605 cgctcgaggtcagctccgacggaaccatcaagttcgaggagaaggacggaatcgactacg 664 Query: 422 cggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagc 481 | |||||||| |||||||| || |||||||||||||||||||||||||||||| ||| | Sbjct: 665 ccgccgtcaccgtgcagctgccgggaggcgagcgcgtgccgttcctcttcaccatcatga 724 Query: 482 agctcgtcgccaccggcaagccggagagcttcagcgggcccttcctcgtgcccagctaca 541 | || ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 725 atctggtcgccaccggcaagccggagagcttcggcgggcccttcctcgtgcccagctacc 784 Query: 542 ggggttcctctttcct 557 | ||||| || ||||| Sbjct: 785 gtggttcgtccttcct 800
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 504 bits (254), Expect = e-139 Identities = 425/482 (88%) Strand = Plus / Plus Query: 76 ggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacc 135 ||||| || |||||||| | ||| | |||||| ||||||||||| || ||||| ||||| Sbjct: 17345883 ggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgagattcagagtaagacg 17345942 Query: 136 tacatggaggtgaagggtaccggcaccgcgaaccagtgcccgaccatcgacggcggcgtc 195 ||||||||||||||||| |||||||| ||||||||||||||||| | || ||||||||| Sbjct: 17345943 tacatggaggtgaagggaaccggcacggcgaaccagtgcccgacggtggagggcggcgtc 17346002 Query: 196 gactccttccccttcaaggccggcaagtacgagatgaagaagttctgcctggagcccacc 255 ||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| || Sbjct: 17346003 gactccttcgccttcaaggccggcaagtacaacatgaagaagttctgcctggagccgacg 17346062 Query: 256 tccttcaccgtcaaggccgagggcatccagaagaacgagccaccggccttccagaagacc 315 ||||||||||| ||||| |||||| | ||||||| |||||| | |||||||||||| Sbjct: 17346063 tccttcaccgttaaggcggagggcgtggccaagaacgcgccacccgagttccagaagacc 17346122 Query: 316 aagctcatgacccgtctcacttacacccttgacgagatggaaggcccgctcgaggtcggc 375 |||||||||||||| || || |||||||| |||||||| || ||||||||||||||| || Sbjct: 17346123 aagctcatgacccgcctgacctacaccctcgacgagatcgagggcccgctcgaggtcagc 17346182 Query: 376 gccgacggcaccctcaagttcgaggagaaggacggcatcgactacgcggccgtcacagtg 435 ||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 17346183 tccgacggaaccatcaagttcgaggagaaggacggaatcgactacgccgccgtcaccgtg 17346242 Query: 436 cagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgccacc 495 ||||| || |||||||||||||||||||||||||||||| ||||| | || ||||||||| Sbjct: 17346243 cagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaagaatctggtcgccacc 17346302 Query: 496 ggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggttcctctttc 555 |||||||||||||||||| |||||||||||||||||||||||||| | ||||| || ||| Sbjct: 17346303 ggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggttcgtccttc 17346362 Query: 556 ct 557 || Sbjct: 17346363 ct 17346364 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 17345693 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 17345751 Query: 62 ccctcctcgtctc 74 | || |||||||| Sbjct: 17345752 ctctgctcgtctc 17345764
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 504 bits (254), Expect = e-139 Identities = 425/482 (88%) Strand = Plus / Plus Query: 76 ggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacc 135 ||||| || |||||||| | ||| | |||||| ||||||||||| || ||||| ||||| Sbjct: 112144 ggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgagattcagagtaagacg 112203 Query: 136 tacatggaggtgaagggtaccggcaccgcgaaccagtgcccgaccatcgacggcggcgtc 195 ||||||||||||||||| |||||||| ||||||||||||||||| | || ||||||||| Sbjct: 112204 tacatggaggtgaagggaaccggcacggcgaaccagtgcccgacggtggagggcggcgtc 112263 Query: 196 gactccttccccttcaaggccggcaagtacgagatgaagaagttctgcctggagcccacc 255 ||||||||| |||||||||||||||||||| | ||||||||||||||||||||||| || Sbjct: 112264 gactccttcgccttcaaggccggcaagtacaacatgaagaagttctgcctggagccgacg 112323 Query: 256 tccttcaccgtcaaggccgagggcatccagaagaacgagccaccggccttccagaagacc 315 ||||||||||| ||||| |||||| | ||||||| |||||| | |||||||||||| Sbjct: 112324 tccttcaccgttaaggcggagggcgtggccaagaacgcgccacccgagttccagaagacc 112383 Query: 316 aagctcatgacccgtctcacttacacccttgacgagatggaaggcccgctcgaggtcggc 375 |||||||||||||| || || |||||||| |||||||| || ||||||||||||||| || Sbjct: 112384 aagctcatgacccgcctgacctacaccctcgacgagatcgagggcccgctcgaggtcagc 112443 Query: 376 gccgacggcaccctcaagttcgaggagaaggacggcatcgactacgcggccgtcacagtg 435 ||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct: 112444 tccgacggaaccatcaagttcgaggagaaggacggaatcgactacgccgccgtcaccgtg 112503 Query: 436 cagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgccacc 495 ||||| || |||||||||||||||||||||||||||||| ||||| | || ||||||||| Sbjct: 112504 cagctgccgggaggcgagcgcgtgccgttcctcttcaccatcaagaatctggtcgccacc 112563 Query: 496 ggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggttcctctttc 555 |||||||||||||||||| |||||||||||||||||||||||||| | ||||| || ||| Sbjct: 112564 ggcaagccggagagcttcggcgggcccttcctcgtgcccagctaccgtggttcgtccttc 112623 Query: 556 ct 557 || Sbjct: 112624 ct 112625 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 111954 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 112012 Query: 62 ccctcctcgtctc 74 | || |||||||| Sbjct: 112013 ctctgctcgtctc 112025
>gb|AF037457.1|AF037457 Fritillaria agrestis photosystem II oxygen evolving complex protein 1 precursor (psbO) mRNA, complete cds Length = 1140 Score = 331 bits (167), Expect = 1e-87 Identities = 452/546 (82%), Gaps = 1/546 (0%) Strand = Plus / Plus Query: 12 aagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctgccctcctcgt 71 |||||| |||| ||||||||| | ||||||||||||||||| || ||||||||| || | Sbjct: 208 aagtgcaccgatgccgccaagc-tcgccggcttcgccctcgccacatctgccctcgtcat 266 Query: 72 ctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaa 131 ||| || ||||| || ||||| | ||| |||||||||||||| || || ||||||||||| Sbjct: 267 ctcgggagcaagcgctgagggagtgccgaagaggctgacctttgatgagatccagagcaa 326 Query: 132 gacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgaccatcgacggcgg 191 ||||||||||||||||||||| | ||| || ||||| ||||||||||||||||| ||||| Sbjct: 327 gacctacatggaggtgaagggcagcgggactgcgaatcagtgcccgaccatcgagggcgg 386 Query: 192 cgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttctgcctggagcc 251 || |||||| || |||| ||||||||||| ||||||| ||||||| ||||| Sbjct: 387 gactgagtccttcggctacaagaccggcaagtacaccctgaagaaactctgccttgagcc 446 Query: 252 cacctccttcaccgtcaaggccgagggcatccagaagaacgagccaccggccttccagaa 311 |||||||||||||||||| || ||||||||| | || |||| || || | |||||||| Sbjct: 447 cacctccttcaccgtcaaagctgagggcatcaacaaaaacgcaccccctgagttccagaa 506 Query: 312 gaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcccgctcgaggt 371 || ||||| |||||||| ||||| ||||| ||||||||||| || || || ||||||| Sbjct: 507 aactaagctaatgacccgcctcacctacactcttgacgagattgagggacccttcgaggt 566 Query: 372 cggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacgcggccgtcac 431 | | | ||||| || ||||||||||||||||||| || || |||||||| || || || Sbjct: 567 tgcccctgacggtactgtcaagttcgaggagaaggatggtattgactacgcagctgtaac 626 Query: 432 agtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgc 491 ||||||||| || ||||| ||||| ||||||||| | |||||||| |||||||| || || Sbjct: 627 agtgcagctgcctggaggggagcgtgtgccgttcttgttcaccgtgaagcagctggtggc 686 Query: 492 caccggcaagccggagagcttcagcgggcccttcctcgtgcccagctacaggggttcctc 551 ||||| ||||||||||||||||||||| | | ||||||||| |||||| ||||||| || Sbjct: 687 taccgggaagccggagagcttcagcgggtcgtacctcgtgccgagctaccggggttcgtc 746 Query: 552 tttcct 557 ||||| Sbjct: 747 gttcct 752
>dbj|AK062941.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-B10, full insert sequence Length = 620 Score = 208 bits (105), Expect = 1e-50 Identities = 195/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 2 ggtcgcaagcaagtgcgccgacgccgccaagnatggccggcttcgccctcgcaacctctg 61 |||||| | |||||||||||| ||||||||| | ||||||||||||||||| ||||| | Sbjct: 238 ggtcgccaacaagtgcgccgatgccgccaagc-tcgccggcttcgccctcgccacctcag 296 Query: 62 ccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaa 121 | || |||||||| ||||| || |||||||| | ||| | |||||| ||||||||||| | Sbjct: 297 ctctgctcgtctcgggcgccagcgcggagggcgtgccgaggaggcttaccttcgacgaga 356 Query: 122 tccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacca 181 | ||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 357 ttcagagtaagacgtacatggaggtgaagggaaccggcacggcgaaccagtgcccgacgg 416 Query: 182 tcgacggcggcgtcgactccttccccttcaaggccggcaagtac 225 | || |||||||||||||||||| |||||||||||||||||||| Sbjct: 417 tggagggcggcgtcgactccttcgccttcaaggccggcaagtac 460
>dbj|AP006108.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT11O06, TM0194, complete sequence Length = 108277 Score = 176 bits (89), Expect = 5e-41 Identities = 323/401 (80%) Strand = Plus / Minus Query: 79 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 138 ||||||||||| || || || |||||||| |||||||| ||||||||||||||||| ||| Sbjct: 67315 gcaagtgcggaaggtgctccgaagaggctaaccttcgatgaaatccagagcaagacatac 67256 Query: 139 atggaggtgaagggtaccggcaccgcgaaccagtgcccgaccatcgacggcggcgtcgac 198 ||||| |||||||| ||||| ||||| ||||||||||| ||||| || || || || || Sbjct: 67255 atggaagtgaagggaaccggaaccgcaaaccagtgccccaccattgaagggggagtggaa 67196 Query: 199 tccttccccttcaaggccggcaagtacgagatgaagaagttctgcctggagcccacctcc 258 || || ||||||||||||| |||||| | |||||||||||||| || ||||| || Sbjct: 67195 tcattttccttcaaggccgggaagtacaatgccaagaagttctgccttgaacccacttca 67136 Query: 259 ttcaccgtcaaggccgagggcatccagaagaacgagccaccggccttccagaagaccaag 318 ||||| || ||||| ||||| | ||||||| |||| | ||||| || |||||| Sbjct: 67135 ttcacagtgaaggcagagggagtagccaagaacgccccacttgagttccaaaacaccaag 67076 Query: 319 ctcatgacccgtctcacttacacccttgacgagatggaaggcccgctcgaggtcggcgcc 378 |||||||| ||||| || |||||||| |||||||| ||||| || | ||||| | | Sbjct: 67075 ctcatgacacgtctgacctacaccctcgacgagatcgaaggaccctttgaggtttcctct 67016 Query: 379 gacggcaccctcaagttcgaggagaaggacggcatcgactacgcggccgtcacagtgcag 438 || ||||| |||||||||||||||| || ||||| |||||||| || |||||||| ||| Sbjct: 67015 gatggcactgtcaagttcgaggagaaagatggcattgactacgctgctgtcacagttcag 66956 Query: 439 ctccccggaggcgagcgcgtgccgttcctcttcaccgtcaa 479 || ||||| |||||||| || || ||||| |||||| |||| Sbjct: 66955 cttcccggtggcgagcgtgttccattccttttcaccatcaa 66915
>gb|AF139818.1|AF139818 Brassica napus 33 kDa oxygen evolving protein of photosystem II (psbo) mRNA, complete cds Length = 1247 Score = 127 bits (64), Expect = 4e-26 Identities = 256/320 (80%) Strand = Plus / Plus Query: 52 gcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgacc 111 ||||||||||| ||| ||||||| || |||||||| || || || || ||||| |||| Sbjct: 226 gcaacctctgctctcgtcgtctcgggagcaagtgcagaaggagctccgaagagattgact 285 Query: 112 ttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccag 171 | ||| || || ||||||||||| |||||||| |||||||| || || ||||| |||||| Sbjct: 286 tacgatgagatacagagcaagacatacatggaagtgaagggaactggaaccgccaaccag 345 Query: 172 tgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatg 231 ||||| ||||| ||||| ||| || | ||| ||||||| | || ||||||| Sbjct: 346 tgcccaaccattgacggtggctctgagactttctccttcaaaccgggaaagtacgccggc 405 Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 291 |||||||||||| | ||||| || ||||||||||||||||| ||| | | |||||| Sbjct: 406 aagaagttctgcttcgagcctacttccttcaccgtcaaggctgagagtgttagcaagaac 465 Query: 292 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 351 | || || | ||||||||| ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 466 gcacctcctgacttccagaacaccaagctcatgacccgtctcacctacactcttgacgag 525 Query: 352 atggaaggcccgctcgaggt 371 || |||||||| ||||||| Sbjct: 526 atcgaaggccccttcgaggt 545
>ref|NM_114942.2| Arabidopsis thaliana PSBO-2/PSBO2; oxygen evolving AT3G50820 (PSBO-2/PSBO2) mRNA, complete cds Length = 1243 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 291 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 512 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 571 Query: 292 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 351 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 572 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 631 Query: 352 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 411 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 632 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 691 Query: 412 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 471 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 692 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 751 Query: 472 accgtcaagcagctcg 487 || || |||||||||| Sbjct: 752 acggttaagcagctcg 767 Score = 85.7 bits (43), Expect = 1e-13 Identities = 128/155 (82%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 19 ccgacgccgccaagnatggccggcttcgccctcgcaacctctgccctcctcgtctctggc 78 |||||||||||||| || ||||| || || || || |||||||| ||| | ||||| || Sbjct: 300 ccgacgccgccaag-atcgccggttttgctctagccacctctgctctcgttgtctcgggg 358 Query: 79 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 138 || |||||||||| || || |||||||| || | |||||| || ||||||||||| ||| Sbjct: 359 gccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttac 418 Query: 139 atggaggtgaagggtaccggcaccgcgaaccagtg 173 |||||||| ||||||||||| || || |||||||| Sbjct: 419 atggaggtaaagggtaccggtacggcaaaccagtg 453
>gb|BT015545.1| Arabidopsis thaliana At3g50820 mRNA sequence Length = 738 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 291 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 139 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 198 Query: 292 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 351 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 199 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 258 Query: 352 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 411 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 259 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 318 Query: 412 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 471 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 319 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 378 Query: 472 accgtcaagcagctcg 487 || || |||||||||| Sbjct: 379 acggttaagcagctcg 394 Score = 67.9 bits (34), Expect = 3e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 100 aagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggc 159 |||||||| || | |||||| || ||||||||||| ||||||||||| ||||||||||| Sbjct: 7 aagaggctaacgtacgacgagatacagagcaagacttacatggaggtaaagggtaccggt 66 Query: 160 accgcgaaccagtg 173 || || |||||||| Sbjct: 67 acggcaaaccagtg 80
>gb|AY116934.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 996 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 291 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 397 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 456 Query: 292 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 351 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 457 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 516 Query: 352 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 411 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 517 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 576 Query: 412 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 471 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 577 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 636 Query: 472 accgtcaagcagctcg 487 || || |||||||||| Sbjct: 637 acggttaagcagctcg 652 Score = 85.7 bits (43), Expect = 1e-13 Identities = 128/155 (82%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 19 ccgacgccgccaagnatggccggcttcgccctcgcaacctctgccctcctcgtctctggc 78 |||||||||||||| || ||||| || || || || |||||||| ||| | ||||| || Sbjct: 185 ccgacgccgccaag-atcgccggttttgctctagccacctctgctctcgttgtctcgggg 243 Query: 79 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 138 || |||||||||| || || |||||||| || | |||||| || ||||||||||| ||| Sbjct: 244 gccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttac 303 Query: 139 atggaggtgaagggtaccggcaccgcgaaccagtg 173 |||||||| ||||||||||| || || |||||||| Sbjct: 304 atggaggtaaagggtaccggtacggcaaaccagtg 338
>gb|AY050362.1| Arabidopsis thaliana AT3g50820/F18B3_100 mRNA, complete cds Length = 1127 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 291 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 455 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 514 Query: 292 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 351 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 515 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 574 Query: 352 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 411 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 575 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 634 Query: 412 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 471 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 635 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 694 Query: 472 accgtcaagcagctcg 487 || || |||||||||| Sbjct: 695 acggttaagcagctcg 710 Score = 85.7 bits (43), Expect = 1e-13 Identities = 128/155 (82%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 19 ccgacgccgccaagnatggccggcttcgccctcgcaacctctgccctcctcgtctctggc 78 |||||||||||||| || ||||| || || || || |||||||| ||| | ||||| || Sbjct: 243 ccgacgccgccaag-atcgccggttttgctctagccacctctgctctcgttgtctcgggg 301 Query: 79 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 138 || |||||||||| || || |||||||| || | |||||| || ||||||||||| ||| Sbjct: 302 gccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttac 361 Query: 139 atggaggtgaagggtaccggcaccgcgaaccagtg 173 |||||||| ||||||||||| || || |||||||| Sbjct: 362 atggaggtaaagggtaccggtacggcaaaccagtg 396
>emb|BX823920.1|CNS0A6OQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1067 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 291 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 403 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 462 Query: 292 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 351 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 463 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 522 Query: 352 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 411 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 523 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 582 Query: 412 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 471 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 583 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 642 Query: 472 accgtcaagcagctcg 487 || || |||||||||| Sbjct: 643 acggttaagcagctcg 658 Score = 85.7 bits (43), Expect = 1e-13 Identities = 128/155 (82%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 19 ccgacgccgccaagnatggccggcttcgccctcgcaacctctgccctcctcgtctctggc 78 |||||||||||||| || ||||| || || || || |||||||| ||| | ||||| || Sbjct: 191 ccgacgccgccaag-atcgccggttttgctctagccacctctgctctcgttgtctcgggg 249 Query: 79 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 138 || |||||||||| || || |||||||| || | |||||| || ||||||||||| ||| Sbjct: 250 gccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttac 309 Query: 139 atggaggtgaagggtaccggcaccgcgaaccagtg 173 |||||||| ||||||||||| || || |||||||| Sbjct: 310 atggaggtaaagggtaccggtacggcaaaccagtg 344
>gb|AY088799.1| Arabidopsis thaliana clone 95531 mRNA, complete sequence Length = 1189 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 291 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 512 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 571 Query: 292 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 351 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 572 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 631 Query: 352 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 411 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 632 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 691 Query: 412 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 471 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 692 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 751 Query: 472 accgtcaagcagctcg 487 || || |||||||||| Sbjct: 752 acggttaagcagctcg 767 Score = 85.7 bits (43), Expect = 1e-13 Identities = 128/155 (82%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 19 ccgacgccgccaagnatggccggcttcgccctcgcaacctctgccctcctcgtctctggc 78 |||||||||||||| || ||||| || || || || |||||||| ||| | ||||| || Sbjct: 300 ccgacgccgccaag-atcgccggttttgctctagccacctctgctctcgttgtctcgggg 358 Query: 79 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 138 || |||||||||| || || |||||||| || | |||||| || ||||||||||| ||| Sbjct: 359 gccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttac 418 Query: 139 atggaggtgaagggtaccggcaccgcgaaccagtg 173 |||||||| ||||||||||| || || |||||||| Sbjct: 419 atggaggtaaagggtaccggtacggcaaaccagtg 453
>emb|AJ145957.1|ATH145957 Arabidopsis thaliana mRNA for precursor of the 33 kDa subunit of the oxygen evolving complex (psbO2 gene) Length = 1159 Score = 119 bits (60), Expect = 1e-23 Identities = 207/256 (80%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 291 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 433 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 492 Query: 292 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 351 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 493 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 552 Query: 352 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 411 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 553 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 612 Query: 412 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 471 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 613 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 672 Query: 472 accgtcaagcagctcg 487 || || |||||||||| Sbjct: 673 acggttaagcagctcg 688 Score = 85.7 bits (43), Expect = 1e-13 Identities = 128/155 (82%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 19 ccgacgccgccaagnatggccggcttcgccctcgcaacctctgccctcctcgtctctggc 78 |||||||||||||| || ||||| || || || || |||||||| ||| | ||||| || Sbjct: 221 ccgacgccgccaag-atcgccggttttgctctagccacctctgctctcgttgtctcgggg 279 Query: 79 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 138 || |||||||||| || || |||||||| || | |||||| || ||||||||||| ||| Sbjct: 280 gccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttac 339 Query: 139 atggaggtgaagggtaccggcaccgcgaaccagtg 173 |||||||| ||||||||||| || || |||||||| Sbjct: 340 atggaggtaaagggtaccggtacggcaaaccagtg 374
>emb|BX822412.1|CNS0A77V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB35ZE10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1004 Score = 105 bits (53), Expect = 2e-19 Identities = 207/257 (80%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 291 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 417 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 476 Query: 292 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 351 | || |||| ||||| || |||||||||||||||||||| |||||||| || || ||| Sbjct: 477 gcaccgccggatttccaaaacaccaagctcatgacccgtcttacttacacactcgatgag 536 Query: 352 atggaaggcccgctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggc 411 || ||||| || ||||||| || | ||||| | | | |||||| |||| | || || Sbjct: 537 atcgaaggacccttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggt 596 Query: 412 atcgactacgcggccgtcacagtgc-agctccccggaggcgagcgcgtgccgttcctctt 470 ||||| ||||| || |||||||||| |||| || ||||| || ||||||||||||||||| Sbjct: 597 atcgattacgcagcagtcacagtgccagcttccgggaggagaacgcgtgccgttcctctt 656 Query: 471 caccgtcaagcagctcg 487 ||| || |||||||||| Sbjct: 657 cacggttaagcagctcg 673 Score = 85.7 bits (43), Expect = 1e-13 Identities = 128/155 (82%), Gaps = 1/155 (0%) Strand = Plus / Plus Query: 19 ccgacgccgccaagnatggccggcttcgccctcgcaacctctgccctcctcgtctctggc 78 |||||||||||||| || ||||| || || || || |||||||| ||| | ||||| || Sbjct: 205 ccgacgccgccaag-atcgccggttttgctctagccacctctgctctcgttgtctcgggg 263 Query: 79 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 138 || |||||||||| || || |||||||| || | |||||| || ||||||||||| ||| Sbjct: 264 gccggtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttac 323 Query: 139 atggaggtgaagggtaccggcaccgcgaaccagtg 173 |||||||| ||||||||||| || || |||||||| Sbjct: 324 atggaggtaaagggtaccggtacggcaaaccagtg 358
>emb|BX823297.1|CNS0A6KS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 629 Score = 103 bits (52), Expect = 6e-19 Identities = 151/184 (82%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcccg 363 ||||| || ||||||||||||||||||||||||||||| || || ||||| ||||| || Sbjct: 36 ttccaaaacaccaagctcatgacccgtctcacttacacactcgatgagatcgaaggaccc 95 Query: 364 ctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacgcg 423 ||||||| || | ||||| | | | |||||| |||| | || || ||||| ||||| Sbjct: 96 ttcgaggttggttcagacggaagcgtgaagttcaaggaagaagatggtatcgattacgca 155 Query: 424 gccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcag 483 || |||||||| ||||| || ||||| || |||||||||||||||||||| || |||||| Sbjct: 156 gcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttcacggttaagcag 215 Query: 484 ctcg 487 |||| Sbjct: 216 ctcg 219
>dbj|AP006540.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01C03, TM0559, complete sequence Length = 80535 Score = 103 bits (52), Expect = 6e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 397 gaggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgc 456 |||||||| || ||||| ||||| || || |||||||| ||||||||||||||||||||| Sbjct: 73173 gaggagaaagatggcattgactatgctgctgtcacagtccagctccccggaggcgagcgc 73232 Query: 457 gtgccgttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagctt 512 ||||| ||||||||||||||||| ||| | || || |||| ||||| |||||||| Sbjct: 73233 gtgcctttcctcttcaccgtcaaacagttggtggcatccgggaagcctgagagctt 73288 Score = 93.7 bits (47), Expect = 6e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 104 ggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcaccg 163 ||||||||||||| ||||||||||||||||| |||||||| |||||||| || || || | Sbjct: 72880 ggctgaccttcgatgaaatccagagcaagacatacatggaagtgaagggaactggaactg 72939 Query: 164 cgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccgg 218 | ||||||||||| ||||| || || || || ||||| ||| | ||||||||||| Sbjct: 72940 ctaaccagtgcccaaccattgaaggtggagtggactcattcgcgttcaaggccgg 72994
>gb|AY456395.1| 'Chlorella' ellipsoidea oxygen-evolving enhancer protein 1 mRNA, partial cds Length = 817 Score = 101 bits (51), Expect = 2e-18 Identities = 80/90 (88%) Strand = Plus / Plus Query: 398 aggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcg 457 ||||| ||||||||||||||||||| |||||||| ||||| | |||||||||||||| | Sbjct: 92 aggaggaggacggcatcgactacgccgccgtcaccgtgcanatgcccggaggcgagcgtg 151 Query: 458 tgccgttcctcttcaccgtcaagcagctcg 487 |||| |||||||||||| ||||| |||||| Sbjct: 152 tgcccttcctcttcaccatcaaggagctcg 181
>gb|AY641568.1| Brassica oleracea photosystem II protein (psbO) mRNA, complete cds Length = 1158 Score = 93.7 bits (47), Expect = 6e-16 Identities = 263/335 (78%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || ||||||||||| ||| ||||||| || |||||||| ||||| || Sbjct: 269 gccggattcgctcttgcaacctctgctctcgtcgtctcgggagcaagtgcagagggagct 328 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| || || | ||||| || ||||||||||| |||||||| || || || ||| Sbjct: 329 ccgaagagactcacatatgacgagatacagagcaagacatacatggaagtcaaaggaacc 388 Query: 157 ggcaccgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggcc 216 || || || |||||||| || || || ||||| ||| || | ||| |||||||| | Sbjct: 389 ggaactgccaaccagtgtccaactattgacggtggctctgagactttctccttcaagcca 448 Query: 217 ggcaagtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgag 276 || ||||||| |||||||||||| | ||||| || |||||||||||||| |||||| Sbjct: 449 ggtaagtacgctggcaagaagttctgcttcgagcctacttccttcaccgtcaaagccgag 508 Query: 277 ggcatccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcact 336 | | ||||||| || || | |||||||| ||||||||||||||||||||||| Sbjct: 509 agtgttagtaagaacgcacctcccgagttccagaacaccaagctcatgacccgtctcacc 568 Query: 337 tacacccttgacgagatggaaggcccgctcgaggt 371 | ||| |||||||| || |||||||| ||||||| Sbjct: 569 tgcactcttgacgaaatcgaaggccccttcgaggt 603 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 406 gacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttc 465 ||||| ||||||||||| || ||||| || |||||||| ||||||||||| ||||| ||| Sbjct: 638 gacggaatcgactacgctgcagtcactgttcagctcccaggaggcgagcgtgtgccattc 697 Query: 466 ctcttcaccgtcaagcagct 485 |||||||| ||||||||||| Sbjct: 698 ctcttcacagtcaagcagct 717
>gb|AY843522.1| Ammopiptanthus mongolicus clone F19 cold-induced mRNA Length = 834 Score = 87.7 bits (44), Expect = 4e-14 Identities = 86/100 (86%) Strand = Plus / Plus Query: 43 ttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaag 102 ||||||||||| |||||||| ||| | || ||||| ||||||||||| || | || ||| Sbjct: 262 ttcgccctcgccacctctgctctcgttgtatctggagcaagtgcggaaggtgttccaaag 321 Query: 103 aggctgaccttcgacgaaatccagagcaagacctacatgg 142 ||||| |||| ||||||||||||||||||||| ||||||| Sbjct: 322 aggctaacctacgacgaaatccagagcaagacatacatgg 361
>dbj|AB043960.2| Bruguiera gymnorrhiza psbO mRNA for oxygen evolving enhancer protein 1 precursor, complete cds Length = 1102 Score = 83.8 bits (42), Expect = 6e-13 Identities = 201/254 (79%) Strand = Plus / Plus Query: 100 aagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggc 159 |||||||| |||| |||||||||||||||||||| || |||| || ||||| ||||| Sbjct: 274 aagaggctaacctatgacgaaatccagagcaagacatatctggaagtaaagggaaccgga 333 Query: 160 accgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggc 219 || || ||||| ||||| || ||||| || || || ||||| || |||||||| | ||| Sbjct: 334 actgctaaccaatgcccaacaatcgaaggtggggttgactcatttgccttcaagccaggc 393 Query: 220 aagtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggc 279 |||||| | ||||||| || |||||||| || || || |||||||||||||| || || Sbjct: 394 aagtacaatgtgaagaaattatgcctggaaccaacttcattcaccgtcaaggctgaaggt 453 Query: 280 atccagaagaacgagccaccggccttccagaagaccaagctcatgacccgtctcacttac 339 | | ||||| | ||||| | |||||||| |||||||||||||| ||| | || ||| Sbjct: 454 gtaaacaagaatgccccacccgagttccagaacaccaagctcatgactcgtttaacctac 513 Query: 340 acccttgacgagat 353 || || |||||||| Sbjct: 514 acactcgacgagat 527 Score = 63.9 bits (32), Expect = 5e-07 Identities = 77/92 (83%) Strand = Plus / Plus Query: 427 gtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcagctc 486 ||||| |||||||| || || ||||| || ||||| ||||||||||| ||||||||||| Sbjct: 601 gtcaccgtgcagctgcctggtggcgaacgtgtgccattcctcttcacagtcaagcagcta 660 Query: 487 gtcgccaccggcaagccggagagcttcagcgg 518 || || || |||||||| || ||||| ||||| Sbjct: 661 gtagcaacaggcaagccagaaagctttagcgg 692
>gb|AY364014.1| Brassica rapa photosystem II protein (psbO) mRNA, complete cds Length = 1156 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 406 gacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttc 465 ||||| ||||||||||| || ||||| || ||||| || ||||||||||| ||||||||| Sbjct: 629 gacggaatcgactacgctgcagtcactgttcagcttccaggaggcgagcgtgtgccgttc 688 Query: 466 ctcttcaccgtcaagcagct 485 |||||||| | ||||||||| Sbjct: 689 ctcttcacagccaagcagct 708 Score = 79.8 bits (40), Expect = 9e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 307 cagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggccc 362 ||||| ||||||||||||||||||||||| |||||||||||||| || |||||||| Sbjct: 529 cagaataccaagctcatgacccgtctcacctacacccttgacgaaatcgaaggccc 584 Score = 71.9 bits (36), Expect = 2e-09 Identities = 189/240 (78%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || ||||||||||| ||| ||||||| || |||||||| ||||| || Sbjct: 259 gccggattcgctcttgcaacctctgctctcgtcgtctcgggagcaagtgcagagggagct 318 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| || || | ||||| || ||||||||||| |||||||| || || || ||| Sbjct: 319 ccgaagagactcacttatgacgagatacagagcaagacatacatggaagtcaaaggaacc 378 Query: 157 ggcaccgcgaaccagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggcc 216 || || || |||||||| || || || ||||| ||| || | ||| ||||||| || Sbjct: 379 ggaactgccaaccagtgtccaactattgacggtggctctgagactttctccttcaaaccc 438 Query: 217 ggcaagtacgagatgaagaagttctgcctggagcccacctccttcaccgtcaaggccgag 276 || ||||||| |||||||||||| | ||||| || |||||||||||||| |||||| Sbjct: 439 ggtaagtacgctggcaagaagttctgcttcgagcctacttccttcaccgtcaaagccgag 498
>gb|DQ226849.1| Boechera divaricarpa isolate SLW-C-D01 mRNA sequence Length = 379 Score = 79.8 bits (40), Expect = 9e-12 Identities = 115/140 (82%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||| ||||| || Sbjct: 193 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcagagggagct 252 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| ||||||| ||| || || ||||||||||| |||||||| ||||| || || Sbjct: 253 ccaaagagactgacctacgatgagattcagagcaagacatacatggaagtgaaaggaact 312 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 313 ggaacggctaaccagtgccc 332
>emb|AL049862.1|ATF18B3 Arabidopsis thaliana DNA chromosome 3, BAC clone F18B3 Length = 89469 Score = 79.8 bits (40), Expect = 9e-12 Identities = 106/128 (82%) Strand = Plus / Minus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggccgagggcatccagaagaac 291 |||||||||||| | |||||||| ||||||||||||||||| || || || ||||| Sbjct: 40342 aagaagttctgcttcgagcccacttccttcaccgtcaaggcagatagcgtcagcaagaat 40283 Query: 292 gagccaccggccttccagaagaccaagctcatgacccgtctcacttacacccttgacgag 351 | || |||| ||||| || ||||||||||||||||||||||||||||| || || ||| Sbjct: 40282 gcaccgccggatttccaaaacaccaagctcatgacccgtctcacttacacactcgatgag 40223 Query: 352 atggaagg 359 || ||||| Sbjct: 40222 atcgaagg 40215 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Minus Query: 83 gtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctacatgg 142 |||||||||| || || |||||||| || | |||||| || ||||||||||| ||||||| Sbjct: 40491 gtgcggagggagcaccaaagaggctaacgtacgacgagatacagagcaagacttacatgg 40432 Query: 143 aggtgaagggtaccggcaccgcgaaccagtg 173 |||| ||||||||||| || || |||||||| Sbjct: 40431 aggtaaagggtaccggtacggcaaaccagtg 40401 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 412 atcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttc 471 ||||| ||||| || |||||||| ||||| || ||||| || |||||||||||||||||| Sbjct: 40064 atcgattacgcagcagtcacagtccagcttccgggaggagaacgcgtgccgttcctcttc 40005 Query: 472 accgtcaagcagctcg 487 || || |||||||||| Sbjct: 40004 acggttaagcagctcg 39989
>emb|X05548.1|SOPS33 Spinach mRNA for 33kDA precursor protein (associated with photosynthetic water oxidation complex) Length = 1153 Score = 79.8 bits (40), Expect = 9e-12 Identities = 145/180 (80%) Strand = Plus / Plus Query: 303 cttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggccc 362 |||||| || |||||||||||||||||| | || |||||||| |||||||| || || || Sbjct: 514 cttccaaaacaccaagctcatgacccgtttaacctacaccctcgacgagatcgagggacc 573 Query: 363 gctcgaggtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacgc 422 | |||||| |||| ||||| ||||||| |||||||| ||||| || |||||||| Sbjct: 574 ctttgaggtctcgtccgatggcacggtcaagtttgaggagaaagacggtattgactacgc 633 Query: 423 ggccgtcacagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagca 482 || ||||| || |||||||| || || ||||| || |||||| | |||||| ||||||| Sbjct: 634 tgcagtcacggtccagctccctggtggggagcgtgtcccgttcttgttcaccatcaagca 693 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 107 tgaccttcgacgaaatccagagcaagac 134 |||||| |||||| |||||||||||||| Sbjct: 318 tgacctacgacgagatccagagcaagac 345
>dbj|D13297.1|PEAPSBO Pisum sativum mRNA for precursor for 33-kDa protein of photosystem II, complete cds Length = 1221 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Plus Query: 394 ttcgaggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgag 453 ||||||||||| ||||| || || ||||| || |||||||| ||||| || ||||||||| Sbjct: 611 ttcgaggagaaagacggaattgattacgctgcagtcacagttcagcttcctggaggcgag 670 Query: 454 cgcgtgccgttcctcttcaccgtcaagcag 483 || || |||||||| |||||| |||||||| Sbjct: 671 cgtgttccgttccttttcaccatcaagcag 700 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 70 gtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagc 129 |||||||| |||||||| || || || || |||||||| || |||||||||||||| ||| Sbjct: 287 gtctctggagcaagtgcagaaggtgctccaaagaggctaactttcgacgaaatccaaagc 346 Query: 130 aa 131 || Sbjct: 347 aa 348
>ref|NM_126055.2| Arabidopsis thaliana PSBO-1 (OXYGEN-EVOLVING ENHANCER 33) AT5G66570 (PSBO-1) mRNA, complete cds Length = 1239 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 558 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 613 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 291 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 350 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| |||||| || || || ||||||||||| |||||||| ||||| || || Sbjct: 351 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaaaggaact 410 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 411 ggaacggctaaccagtgccc 430 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 486 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 526
>gb|BT015528.1| Arabidopsis thaliana At5g66570 mRNA sequence Length = 744 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 217 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 272 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 145 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 185 Score = 42.1 bits (21), Expect = 1.9 Identities = 45/53 (84%) Strand = Plus / Plus Query: 124 cagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgccc 176 ||||||||||| |||||||| ||||| || || || || || ||||||||||| Sbjct: 37 cagagcaagacatacatggaagtgaaaggaactggaacggctaaccagtgccc 89
>gb|BT000407.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1031 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 472 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 527 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 205 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 264 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| |||||| || || || ||||||||||| |||||||| ||||| || || Sbjct: 265 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaaaggaact 324 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 325 ggaacggctaaccagtgccc 344 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 400 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 440
>gb|AY136291.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (OEC) in photosystem II (At5g66570) mRNA, complete cds Length = 1114 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 517 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 572 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 250 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 309 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| |||||| || || || ||||||||||| |||||||| ||||| || || Sbjct: 310 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaaaggaact 369 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 370 ggaacggctaaccagtgccc 389 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 445 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 485
>gb|AY061924.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 999 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 472 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 527 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 205 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 264 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| |||||| || || || ||||||||||| |||||||| ||||| || || Sbjct: 265 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaaaggaact 324 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 325 ggaacggctaaccagtgccc 344 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 400 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 440
>gb|AF424626.1|AF424626 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1141 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 506 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 561 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 239 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 298 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| |||||| || || || ||||||||||| |||||||| ||||| || || Sbjct: 299 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaaaggaact 358 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 359 ggaacggctaaccagtgccc 378 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 434 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 474
>gb|AY056401.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1156 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 512 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 567 Score = 65.9 bits (33), Expect = 1e-07 Identities = 99/121 (81%) Strand = Plus / Plus Query: 56 cctctgccctcctcgtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcg 115 ||||||| ||| ||||||| || |||||||||||||| || || ||||| |||||| | Sbjct: 264 cctctgctctcgtcgtctcgggagcaagtgcggagggagctccaaagagattgacctatg 323 Query: 116 acgaaatccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcc 175 | || || ||||||||||| |||||||| ||||| || || || || || |||||||||| Sbjct: 324 atgagattcagagcaagacatacatggaagtgaaaggaactggaacggctaaccagtgcc 383 Query: 176 c 176 | Sbjct: 384 c 384 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 440 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 480
>gb|AY054583.1| Arabidopsis thaliana 33 kDa polypeptide of oxygen-evolving complex (At5g66570; K1F13.25) mRNA, complete cds Length = 1118 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 508 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 563 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 241 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 300 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| |||||| || || || ||||||||||| |||||||| ||||| || || Sbjct: 301 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaaagggact 360 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 361 ggaacggctaaccagtgccc 380 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 436 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 476
>gb|AY052299.1| Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1132 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 506 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 561 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 239 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 298 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| |||||| || || || ||||||||||| |||||||| ||||| || || Sbjct: 299 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaaaggaact 358 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 359 ggaacggctaaccagtgccc 378 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 434 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 474
>gb|AF372898.1|AF372898 Arabidopsis thaliana AT5g66570/K1F13_25 mRNA, complete cds Length = 1150 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 506 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 561 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 239 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 298 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| |||||| || || || ||||||||||| |||||||| ||||| || || Sbjct: 299 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaaaggaact 358 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 359 ggaacggctaaccagtgccc 378 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 434 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 474
>emb|BX830360.1|CNS0A01E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB75ZG08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1088 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 504 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 559 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 237 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 296 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| |||||| || || || ||||||||||| |||||||| ||||| || || Sbjct: 297 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaaaggaact 356 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 357 ggaacggctaaccagtgccc 376 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 432 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 472
>emb|BX831462.1|CNS09ZGC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZC11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 497 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 552 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 230 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 289 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| |||||| || || || ||||||||||| |||||||| ||||| || || Sbjct: 290 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaaaggaact 349 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 350 ggaacggctaaccagtgccc 369 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 425 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 465
>emb|BX831411.1|CNS09ZD1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS88ZC06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 488 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 543 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 221 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 280 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| |||||| || || || ||||||||||| |||||||| ||||| || || Sbjct: 281 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaaaggaact 340 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 341 ggaacggctaaccagtgccc 360 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 416 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 456
>gb|AY087630.1| Arabidopsis thaliana clone 37218 mRNA, complete sequence Length = 1202 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 558 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 613 Score = 71.9 bits (36), Expect = 2e-09 Identities = 114/140 (81%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 291 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 350 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaagggtacc 156 || ||||| |||||| || || || ||||||||||| |||||||| ||||| || || Sbjct: 351 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaaaggaact 410 Query: 157 ggcaccgcgaaccagtgccc 176 || || || ||||||||||| Sbjct: 411 ggaacggctaaccagtgccc 430 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 486 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 526
>dbj|AB013389.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K1F13 Length = 83511 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 58427 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 58482 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 79 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 138 |||||||||||||| || || ||||| |||||| || || || ||||||||||| ||| Sbjct: 58202 gcaagtgcggagggagctccaaagagattgacctatgatgagattcagagcaagacatac 58261 Query: 139 atggaggtgaagggtaccggcaccgcgaaccagtgccc 176 ||||| ||||| || || || || || ||||||||||| Sbjct: 58262 atggaagtgaaaggaactggaacggctaaccagtgccc 58299 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 58355 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 58395
>emb|Y15433.1|ATY15433 Arabidopsis thaliana psbO gene Length = 1520 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 802 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 857 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 730 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 770 Score = 44.1 bits (22), Expect = 0.48 Identities = 79/98 (80%) Strand = Plus / Plus Query: 79 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 138 |||||||||||||| || || ||||| |||| | || || || ||||||||||| ||| Sbjct: 577 gcaagtgcggagggagctccaaagagattgacttatgatgagattcagagcaagacatac 636 Query: 139 atggaggtgaagggtaccggcaccgcgaaccagtgccc 176 ||||| ||||| || || || || || ||||||||||| Sbjct: 637 atggaagtgaaaggaactggaacggctaaccagtgccc 674
>emb|X52428.1|ATOEP A.thaliana mRNA for 33 kDa oxygen-evolving protein Length = 1140 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagatggaagg 359 |||||||| || ||||||||||||||||| || ||||||||||||||||| ||||| Sbjct: 505 ttccagaacacaaagctcatgacccgtcttacctacacccttgacgagatcgaagg 560 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 37 gccggcttcgccctcgcaacctctgccctcctcgtctctggcgcaagtgcggagggggcg 96 ||||| ||||| || || |||||||| ||| ||||||| || |||||||||||||| || Sbjct: 238 gccggattcgctcttgccacctctgctctcgtcgtctcgggagcaagtgcggagggagct 297 Query: 97 cccaagaggctgaccttcgacgaaatccagagcaagacctacatggaggtgaa 149 || ||||| |||||| || || || ||||||||||| |||||||| ||||| Sbjct: 298 ccaaagagattgacctatgatgagattcagagcaagacatacatggaagtgaa 350 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 433 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 473
>emb|AJ821800.1| Guillardia theta partial mRNA for oxygen-evolving enhancer (oee gene) Length = 792 Score = 69.9 bits (35), Expect = 8e-09 Identities = 95/115 (82%) Strand = Plus / Plus Query: 379 gacggcaccctcaagttcgaggagaaggacggcatcgactacgcggccgtcacagtgcag 438 |||||| |||||| ||| |||||||||| || |||||||||| ||| ||| || ||| Sbjct: 286 gacggctccctcaccttccaggagaaggagggtctcgactacgccgccaccaccgtccag 345 Query: 439 ctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgcca 493 || || ||||||||||| || || ||| |||||||| ||||| |||||||||||| Sbjct: 346 cttcctggaggcgagcgtgttcccttcttcttcaccatcaaggagctcgtcgcca 400
>gb|AY116669.1| Isochrysis galbana CCMP1323 oxygen evolving enhancer 1 precursor (psbO) mRNA, complete cds; nuclear gene for plastid product Length = 1244 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 400 gagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtg 459 ||||||||||| || |||||||| || ||| |||||||| || || |||||||||||| Sbjct: 514 gagaaggacggtattgactacgcagcgaccaccgtgcagctgccgggcggcgagcgcgtg 573 Query: 460 ccgttcctcttcaccgt 476 || |||||||||||||| Sbjct: 574 cccttcctcttcaccgt 590
>emb|AJ784854.1| Cyanophora paradoxa mRNA for oxygen-evolving enhancer protein 1 (psbO gene) Length = 1338 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Plus Query: 400 gagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtg 459 |||||||||||| |||||||| |||| | || || |||||||||| ||||||| ||| Sbjct: 590 gagaaggacggcttcgactaccaggccctgaccgtcaagctccccggtggcgagctcgtc 649 Query: 460 ccgttcctcttcaccgtcaagcagctcgtcgcca 493 ||| | ||||||||||| ||| ||||| |||||| Sbjct: 650 ccgatgctcttcaccgttaaggagctcatcgcca 683
>gb|DQ122908.1| Chlamydomonas incerta chloroplast oxygen-evolving enhancer protein 1 (Psb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1213 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 406 gacggcatcgactacgcggccgtcacagtgcagctccccggaggcgagcgcgtgccgttc 465 |||||||| |||||||| ||| ||| || ||||| ||||| |||||||||||| | ||| Sbjct: 478 gacggcattgactacgccgccaccaccgtccagctgcccggtggcgagcgcgtggctttc 537 Query: 466 ctcttcaccgtcaagcag 483 || |||||| |||||||| Sbjct: 538 ctgttcaccatcaagcag 555
>gb|AY952375.1| Nicotiana benthamiana chloroplast photosynthetic oxygen-evolving protein 33 kDa subunit (psbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1048 Score = 60.0 bits (30), Expect = 8e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 109 accttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcaccgcgaac 168 |||||||||||||| || |||||||| |||||||| || ||||| || || || || ||| Sbjct: 287 accttcgacgaaattcaaagcaagacatacatggaagtaaagggaactggaactgctaac 346 Query: 169 cagtgcccgaccat 182 |||||||| ||||| Sbjct: 347 cagtgcccaaccat 360 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagat 353 |||||||| |||||||||||||| || | || ||||||||||| ||||| Sbjct: 482 ttccagaaaaccaagctcatgacacgcttaacctacacccttgatgagat 531 Score = 40.1 bits (20), Expect = 7.6 Identities = 101/128 (78%) Strand = Plus / Plus Query: 391 aagttcgaggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggc 450 ||||| ||||||||||| || || || || || || || ||||| ||||| || || || Sbjct: 569 aagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggt 628 Query: 451 gagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagc 510 ||||| ||||| ||||||||||| |||| ||||| || || | |||||| || || ||| Sbjct: 629 gagcgtgtgcccttcctcttcactatcaaacagctagtggcaagcggcaaaccagaaagc 688 Query: 511 ttcagcgg 518 || ||||| Sbjct: 689 tttagcgg 696
>emb|X15350.1|PS33KDA Pea mRNA for the 33kDa polypeptide of the water-oxidizing complex of photosystem II Length = 1054 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 394 ttcgaggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggcgag 453 ||||||||||| ||||| || || ||||| || ||||| || ||||| || ||||||||| Sbjct: 562 ttcgaggagaaagacggaattgattacgctgcagtcaccgttcagcttcctggaggcgag 621 Query: 454 cgcgtgccgttcctcttcaccgtcaagcag 483 || || || ||||| |||||| |||||||| Sbjct: 622 cgtgttccattccttttcaccatcaagcag 651 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 70 gtctctggcgcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagc 129 |||||||| |||||||| || || || || |||||||| || |||||||||||||| ||| Sbjct: 238 gtctctggagcaagtgcagaaggtgctccaaagaggctaactttcgacgaaatccaaagc 297 Query: 130 aa 131 || Sbjct: 298 aa 299
>emb|X13826.1|CROEE1 C.reinhardtii psb1 mRNA for OEE1 protein of photosystem II (oxygen-evolving enhancer protein) Length = 1714 Score = 60.0 bits (30), Expect = 8e-06 Identities = 138/174 (79%) Strand = Plus / Plus Query: 310 aagaccaagctcatgacccgtctcacttacacccttgacgagatggaaggcccgctcgag 369 |||||||||||||||||||| || || |||||||| |||| ||| ||| || || || Sbjct: 514 aagaccaagctcatgacccgcctgacctacaccctggacgccatgtccggctcgttcaag 573 Query: 370 gtcggcgccgacggcaccctcaagttcgaggagaaggacggcatcgactacgcggccgtc 429 |||||| | |||||| || || | ||||| | |||||||| |||||||| ||| | Sbjct: 574 gtcggctctgacggctccgctgagctgaaggaggatgacggcattgactacgccgccacc 633 Query: 430 acagtgcagctccccggaggcgagcgcgtgccgttcctcttcaccgtcaagcag 483 || || ||||| ||||| |||||||||||| | ||||| |||||| |||||||| Sbjct: 634 accgtccagctgcccggtggcgagcgcgtggctttcctgttcaccatcaagcag 687
>emb|BX830796.1|CNS09ZFE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS24ZC09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1499 Score = 58.0 bits (29), Expect = 3e-05 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccg-tctcacttacacccttgacgagatggaagg 359 |||||||| || |||||||||||||| ||| || ||||||||||||||||| ||||| Sbjct: 801 ttccagaacacaaagctcatgacccgctcttacctacacccttgacgagatcgaagg 857 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 232 aagaagttctgcctggagcccacctccttcaccgtcaaggc 272 |||||||||||| | ||||| || ||||||||||||||||| Sbjct: 729 aagaagttctgcttcgagcctacttccttcaccgtcaaggc 769 Score = 44.1 bits (22), Expect = 0.48 Identities = 79/98 (80%) Strand = Plus / Plus Query: 79 gcaagtgcggagggggcgcccaagaggctgaccttcgacgaaatccagagcaagacctac 138 |||||||||||||| || || |||| |||||| || || || ||||||||||| ||| Sbjct: 575 gcaagtgcggagggagctccagagagattgacctatgatgagattcagagcaagacatac 634 Query: 139 atggaggtgaagggtaccggcaccgcgaaccagtgccc 176 ||||| ||||| || || || || || ||||||||||| Sbjct: 635 atggaagtgaaaggaactggaacggctaaccagtgccc 672
>gb|AY220076.1| Nicotiana tabacum oxygen evolving complex 33 kDa photosystem II protein (PsbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1263 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 109 accttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcaccgcgaac 168 |||||||||||||| || |||||||| |||||||| || ||||| || || || || ||| Sbjct: 293 accttcgacgaaattcaaagcaagacatacatggaagtaaagggaactggaactgctaac 352 Query: 169 cagtgccc 176 |||||||| Sbjct: 353 cagtgccc 360 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagat 353 |||||||| |||||||||||||| || | || ||||||||||| ||||| Sbjct: 488 ttccagaaaaccaagctcatgacacgcttaacctacacccttgatgagat 537 Score = 40.1 bits (20), Expect = 7.6 Identities = 101/128 (78%) Strand = Plus / Plus Query: 391 aagttcgaggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggc 450 ||||| ||||||||||| || || || || || || || ||||| ||||| || || || Sbjct: 575 aagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctgggggt 634 Query: 451 gagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagc 510 ||||| ||||| ||||||||||| |||| ||||| || || | |||||| || || ||| Sbjct: 635 gagcgtgtgcccttcctcttcactatcaaacagctagtggcaagcggcaaaccagaaagc 694 Query: 511 ttcagcgg 518 || ||||| Sbjct: 695 tttagcgg 702
>gb|BT014033.1| Lycopersicon esculentum clone 133096F, mRNA sequence Length = 1170 Score = 54.0 bits (27), Expect = 5e-04 Identities = 126/159 (79%) Strand = Plus / Plus Query: 121 atccagagcaagacctacatggaggtgaagggtaccggcaccgcgaaccagtgcccgacc 180 |||||||||||||| |||||||| || ||||| || || || || ||||||||||| ||| Sbjct: 322 atccagagcaagacatacatggaagtaaagggaactggaacagcaaaccagtgccctacc 381 Query: 181 atcgacggcggcgtcgactccttccccttcaaggccggcaagtacgagatgaagaagttc 240 || || || || || || ||| |||||||| | ||||| ||| | ||||||||| Sbjct: 382 atagatggaggtgttgatagcttttccttcaagccaggcaaatacaacgccaagaagttc 441 Query: 241 tgcctggagcccacctccttcaccgtcaaggccgagggc 279 ||| | ||||| || || |||||||||||||| |||||| Sbjct: 442 tgcttagagccaacatcattcaccgtcaaggcagagggc 480
>emb|X17578.1|STPPOEC S.tuberosum mRNA for a 33kDa precursor protein of the oxygen-evolving complex Length = 1116 Score = 54.0 bits (27), Expect = 5e-04 Identities = 135/171 (78%) Strand = Plus / Plus Query: 109 accttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcaccgcgaac 168 ||||| ||||| || ||||||||||| |||||||| || ||||| || || || || ||| Sbjct: 274 acctttgacgagattcagagcaagacatacatggaagtaaagggaactggaactgccaac 333 Query: 169 cagtgcccgaccatcgacggcggcgtcgactccttccccttcaaggccggcaagtacgag 228 |||||||| ||||| || || || || || ||| |||||||| | ||||| ||| | Sbjct: 334 cagtgccctaccatagatggaggtgttgatagctttgccttcaagccaggcaaatacaac 393 Query: 229 atgaagaagttctgcctggagcccacctccttcaccgtcaaggccgagggc 279 |||||||||||| | ||||| || || |||||||||||||| |||||| Sbjct: 394 gccaagaagttctgcttagagccaacatcattcaccgtcaaggcagagggc 444
>emb|AJ843080.1| Streptomyces fradiae neomycin biosynthetic gene cluster, strain MCIMB 8233 Length = 30837 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtcggcgccgacggcaccctca 391 |||||||||||||||||||||| Sbjct: 27617 gtcggcgccgacggcaccctca 27596
>gb|AY130990.1| Heterosigma akashiwo oxygen-evolving enhancer 1 (psbO) mRNA, complete cds; nuclear gene for chloroplast product Length = 1107 Score = 44.1 bits (22), Expect = 0.48 Identities = 40/46 (86%) Strand = Plus / Plus Query: 451 gagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgccaccg 496 |||||||| || ||||||||||| |||||| |||| || ||||||| Sbjct: 526 gagcgcgttcctttcctcttcacggtcaaggagctggttgccaccg 571
>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete sequence Length = 404829 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 530 tgcccagctacaggggttcctc 551 |||||||||||||||||||||| Sbjct: 169536 tgcccagctacaggggttcctc 169515
>dbj|AB211959.1| Streptomyces fradiae orf6, neoU, neoT, neoS, neoR, neoA, neoB, neoC, neoD, neoE, neoF, neoG, neoH, neoI, neoJ, neoK, neoL, neoM, neoN, neoO, neoP, neoQ, orf1, orf2, orf3, orf4, orf5 genes, complete and partial cds Length = 39237 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtcggcgccgacggcaccctca 391 |||||||||||||||||||||| Sbjct: 31432 gtcggcgccgacggcaccctca 31411
>emb|Z11999.1|LE33KOECP L.esculentum mRNA for 33kDa precursor protein of oxygen-evolving complex Length = 1175 Score = 44.1 bits (22), Expect = 0.48 Identities = 97/122 (79%) Strand = Plus / Plus Query: 391 aagttcgaggagaaggacggcatcgactacgcggccgtcacagtgcagctccccggaggc 450 ||||| ||||||||||| || || || || || || || ||||| ||||| || || || Sbjct: 574 aagtttgaggagaaggatggaattgattatgctgctgttacagttcagcttcctggtggt 633 Query: 451 gagcgcgtgccgttcctcttcaccgtcaagcagctcgtcgccaccggcaagccggagagc 510 ||||| ||||| ||||||||||| |||| ||||| || || | ||||||||| || ||| Sbjct: 634 gagcgtgtgcccttcctcttcactatcaaacagcttgtggcaagcggcaagccagaaagc 693 Query: 511 tt 512 || Sbjct: 694 tt 695
>emb|X64349.1|NT33WOP2 N.tabacum mRNA for 33 kDa polypeptide of water-oxidizing complex of photosystem II Length = 1123 Score = 44.1 bits (22), Expect = 0.48 Identities = 43/50 (86%) Strand = Plus / Plus Query: 304 ttccagaagaccaagctcatgacccgtctcacttacacccttgacgagat 353 |||||||| |||||||||||||| || | || ||||||||||| ||||| Sbjct: 488 ttccagaaaaccaagctcatgacacgcttaacctacacccttgatgagat 537 Score = 44.1 bits (22), Expect = 0.48 Identities = 61/74 (82%) Strand = Plus / Plus Query: 109 accttcgacgaaatccagagcaagacctacatggaggtgaagggtaccggcaccgcgaac 168 ||||| |||||||| || |||||||| |||||||| || || || || || || || ||| Sbjct: 293 acctttgacgaaattcaaagcaagacatacatggaagtcaaaggaactggaactgctaac 352 Query: 169 cagtgcccgaccat 182 |||||||| ||||| Sbjct: 353 cagtgccctaccat 366
>gb|AC114410.9| Mus musculus chromosome 14, clone RP23-151K8, complete sequence Length = 201783 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 530 tgcccagctacaggggttcctc 551 |||||||||||||||||||||| Sbjct: 41472 tgcccagctacaggggttcctc 41451
>emb|AJ629247.1| Streptomyces fradiae neomycin biosynthesis gene cluster, strain DSM 40063 Length = 50466 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 370 gtcggcgccgacggcaccctca 391 |||||||||||||||||||||| Sbjct: 36166 gtcggcgccgacggcaccctca 36145
>gb|M55426.1|STMAACC8 S.fradiae aminoglycoside acetyltransferase (aacC8) gene, complete cds Length = 1353 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 370 gtcggcgccgacggcaccctca 391 |||||||||||||||||||||| Sbjct: 646 gtcggcgccgacggcaccctca 667
>ref|XM_385211.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein (FG05035.1) partial mRNA Length = 936 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 cctccttcaccgtcaaggccg 274 ||||||||||||||||||||| Sbjct: 53 cctccttcaccgtcaaggccg 73
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 gaaatccagagcaagacctacatgg 142 |||||||||||||||||| |||||| Sbjct: 26142 gaaatccagagcaagaccgacatgg 26166
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Minus Query: 194 tcgactccttccccttcaaggccggcaag 222 ||||||||||| |||||||||||||||| Sbjct: 2548780 tcgactccttcgacttcaaggccggcaag 2548752 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 gcccgctcgaggtcggcgccgacg 382 ||||||||||| |||||||||||| Sbjct: 5473916 gcccgctcgagctcggcgccgacg 5473939
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 248 agcccacctccttcaccgtca 268 ||||||||||||||||||||| Sbjct: 1815428 agcccacctccttcaccgtca 1815408
>dbj|AB218878.1| Streptomyces griseus genes for AraC-type transcriptional regulator, ABC-transport system, substrate-binding extracellular domain, ABC-transport system, membrane integral subunit, ABC-transport system, membrane integral subunit, ABC-transport system, ATP-binding protein, Cytochrome P-450, type III polyketide synthase, subtilisine-like serine protease, chitinase, partial and complete cds Length = 12095 Score = 42.1 bits (21), Expect = 1.9 Identities = 33/37 (89%) Strand = Plus / Plus Query: 393 gttcgaggagaaggacggcatcgactacgcggccgtc 429 |||||| |||| |||||||||||||| || ||||||| Sbjct: 853 gttcgacgagacggacggcatcgacttcgaggccgtc 889
>gb|AF110780.1|AF110780 Volvox carteri f. nagariensis clone G14 oxygen-evolving enhancer protein 1 precursor (psbO) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1427 Score = 42.1 bits (21), Expect = 1.9 Identities = 36/41 (87%) Strand = Plus / Plus Query: 309 gaagaccaagctcatgacccgtctcacttacacccttgacg 349 |||||| |||||||||||||| || || |||||||| |||| Sbjct: 419 gaagacgaagctcatgacccgcctgacctacaccctggacg 459
>gb|AF261712.1|AF261712 Ralstonia eutropha high affinity nickel transporter (hoxN) gene, complete cds; IS881, complete sequence; and group II intron, complete sequence Length = 5653 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 118 gaaatccagagcaagacctacatgg 142 |||||||||||||||||| |||||| Sbjct: 5030 gaaatccagagcaagaccgacatgg 5054
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 gaccatcgacggcggcgtcga 197 ||||||||||||||||||||| Sbjct: 8569574 gaccatcgacggcggcgtcga 8569554
>dbj|AB065118.1| Photobacterium phosphoreum glyA, ribX, ribD, ribC, ribBA, ribE, nusB, thiL genes for serine hydroxymethyl transferase, RibX, pyrimidine deaminase/pyrimidine reductase, riboflavin synthase, GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase, lumazine synthase, NusB protein, thiamin monophosphate kinase, partial and complete cds Length = 5616 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 caagtgcgccgacgccgccaa 31 ||||||||||||||||||||| Sbjct: 789 caagtgcgccgacgccgccaa 809
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 gaggtcggcgccgacggcaccctc 390 |||| ||||||||||||||||||| Sbjct: 2799546 gaggacggcgccgacggcaccctc 2799523
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ccggaggcgagcgcgtgccg 462 |||||||||||||||||||| Sbjct: 1527994 ccggaggcgagcgcgtgccg 1528013
>ref|XM_955652.1| Neurospora crassa OR74A hypothetical protein (NCU01267.1) partial mRNA Length = 1869 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ccacctccttcaccgtcaag 270 |||||||||||||||||||| Sbjct: 359 ccacctccttcaccgtcaag 378
>ref|XM_957164.1| Neurospora crassa OR74A hypothetical protein ( (AF309689) Snz-type pyridoxine vitamin B6 biosynthetic protein SNZ1 [Neurospora crassa OR74A] ) (NCU06550.1) partial mRNA Length = 927 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ctccttcaccgtcaaggccg 274 |||||||||||||||||||| Sbjct: 33 ctccttcaccgtcaaggccg 52
>ref|XM_326404.1| Neurospora crassa OR74A hypothetical protein ( (AF309689) Snz-type pyridoxine vitamin B6 biosynthetic protein SNZ1 [Neurospora crassa OR74A] ) (NCU06550.1) partial mRNA Length = 927 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 ctccttcaccgtcaaggccg 274 |||||||||||||||||||| Sbjct: 33 ctccttcaccgtcaaggccg 52
>ref|XM_326759.1| Neurospora crassa OR74A hypothetical protein (NCU01267.1) partial mRNA Length = 1869 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ccacctccttcaccgtcaag 270 |||||||||||||||||||| Sbjct: 359 ccacctccttcaccgtcaag 378
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ctcgtcgccaccggcaagcc 503 |||||||||||||||||||| Sbjct: 1368439 ctcgtcgccaccggcaagcc 1368458
>gb|AF486581.1| Uncultured bacterium aminoglycoside 3'-N-acetyltransferase gene, complete cds Length = 38269 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 gcccgctcgaggtcggcgcc 378 |||||||||||||||||||| Sbjct: 12965 gcccgctcgaggtcggcgcc 12984
>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06, complete sequence Length = 185449 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcaccgtcaagcagctcgtc 489 |||||||||||||||||||| Sbjct: 63812 tcaccgtcaagcagctcgtc 63793
>gb|AC123847.4| Mus musculus BAC clone RP23-443O1 from chromosome 3, complete sequence Length = 189689 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 219 caagtacgagatgaagaagttctg 242 |||||| ||||||||||||||||| Sbjct: 86326 caagtaagagatgaagaagttctg 86349
>ref|XM_499937.1| Yarrowia lipolytica CLIB122, YALI0A10252g predicted mRNA Length = 1224 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cttccagaagaccaagctca 322 |||||||||||||||||||| Sbjct: 39 cttccagaagaccaagctca 58
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 gcaagtgcgccgacgccgcc 29 |||||||||||||||||||| Sbjct: 1695787 gcaagtgcgccgacgccgcc 1695768
>ref|XM_786723.1| PREDICTED: Strongylocentrotus purpuratus similar to dynein, axonemal, heavy polypeptide 5 (LOC586967), mRNA Length = 2097 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 303 cttccagaagaccaagctca 322 |||||||||||||||||||| Sbjct: 1293 cttccagaagaccaagctca 1312
>emb|BX842618.1| Neurospora crassa DNA linkage group V BAC clone B13M13 Length = 75160 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 ccacctccttcaccgtcaag 270 |||||||||||||||||||| Sbjct: 55051 ccacctccttcaccgtcaag 55070
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 gaggtcggcgccgacggcaccctc 390 |||| ||||||||||||||||||| Sbjct: 31022 gaggacggcgccgacggcaccctc 30999
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 484 ctcgtcgccaccggcaagcc 503 |||||||||||||||||||| Sbjct: 2685856 ctcgtcgccaccggcaagcc 2685875
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 367 gaggtcggcgccgacggcaccctc 390 |||| ||||||||||||||||||| Sbjct: 259847 gaggacggcgccgacggcaccctc 259824
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29 Length = 303550 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gaaccagtgcccgaccatcg 184 |||||||||||||||||||| Sbjct: 167957 gaaccagtgcccgaccatcg 167976
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 aggtcggcgccgacggcacc 387 |||||||||||||||||||| Sbjct: 726342 aggtcggcgccgacggcacc 726361
>ref|NM_143756.2| Drosophila melanogaster cathD CG1548-RA (cathD), mRNA Length = 1396 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 gacggcaccctcaagttcgaggag 402 |||||||||| ||||||||||||| Sbjct: 404 gacggcacccacaagttcgaggag 381
>gb|AY052119.1| Drosophila melanogaster SD07085 full length cDNA Length = 1381 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 gacggcaccctcaagttcgaggag 402 |||||||||| ||||||||||||| Sbjct: 386 gacggcacccacaagttcgaggag 363
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcaccgtcaagcagctcgtc 489 |||||||||||||||||||| Sbjct: 1907549 tcaccgtcaagcagctcgtc 1907530
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcaccgtcaagcagctcgtc 489 |||||||||||||||||||| Sbjct: 1992257 tcaccgtcaagcagctcgtc 1992238
>gb|AC007301.8|AC007301 Drosophila melanogaster, chromosome 2R, region 43E12-44F1, BAC clone BACR04B09, complete sequence Length = 174707 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 gacggcaccctcaagttcgaggag 402 |||||||||| ||||||||||||| Sbjct: 48527 gacggcacccacaagttcgaggag 48504
>gb|AF309689.1|AF309689 Neurospora crassa chromosome 4 pdx-1 region Length = 36030 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ctccttcaccgtcaaggccg 274 |||||||||||||||||||| Sbjct: 31990 ctccttcaccgtcaaggccg 31971
>dbj|AB206581.1| Oryza sativa (japonica cultivar-group) OsCPD2 mRNA for cytochrome P450, complete cds Length = 1506 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcaccgtcaagcagctcgtc 489 |||||||||||||||||||| Sbjct: 566 tcaccgtcaagcagctcgtc 585
>dbj|AB206580.1| Oryza sativa (japonica cultivar-group) OsCPD1 mRNA for cytochrome P450, complete cds Length = 1506 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcaccgtcaagcagctcgtc 489 |||||||||||||||||||| Sbjct: 566 tcaccgtcaagcagctcgtc 585
>gb|AF220040.1|AF220040 Drosophila melanogaster clone LD06102 cathepsin D precursor (cathD) mRNA, complete cds Length = 1394 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 gacggcaccctcaagttcgaggag 402 |||||||||| ||||||||||||| Sbjct: 383 gacggcacccacaagttcgaggag 360
>emb|BX469931.8| Zebrafish DNA sequence from clone DKEY-108D22 in linkage group 4, complete sequence Length = 204487 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gtacgagatgaagaagttct 241 |||||||||||||||||||| Sbjct: 16616 gtacgagatgaagaagttct 16635
>dbj|AK061129.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-H06, full insert sequence Length = 774 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 ggcgcccaagaggctgacct 112 |||||||||||||||||||| Sbjct: 203 ggcgcccaagaggctgacct 222
>emb|BX323868.6| Zebrafish DNA sequence from clone CH211-276H18 in linkage group 4, complete sequence Length = 163299 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gtacgagatgaagaagttct 241 |||||||||||||||||||| Sbjct: 130761 gtacgagatgaagaagttct 130780
>dbj|AK060257.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-E10, full insert sequence Length = 1784 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcaccgtcaagcagctcgtc 489 |||||||||||||||||||| Sbjct: 650 tcaccgtcaagcagctcgtc 669
>gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11 of 73 of the complete sequence Length = 254177 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 379 gacggcaccctcaagttcgaggag 402 |||||||||| ||||||||||||| Sbjct: 34716 gacggcacccacaagttcgaggag 34739
>emb|AL929241.13| Mouse DNA sequence from clone RP23-4L24 on chromosome 2, complete sequence Length = 168308 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 507 gagcttcagcgggcccttcc 526 |||||||||||||||||||| Sbjct: 79825 gagcttcagcgggcccttcc 79806
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcaccgtcaagcagctcgtc 489 |||||||||||||||||||| Sbjct: 2000038 tcaccgtcaagcagctcgtc 2000019
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcaccgtcaagcagctcgtc 489 |||||||||||||||||||| Sbjct: 1907500 tcaccgtcaagcagctcgtc 1907481
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcaccgtcaagcagctcgtc 489 |||||||||||||||||||| Sbjct: 102240 tcaccgtcaagcagctcgtc 102221
>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107247 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tcaccgtcaagcagctcgtc 489 |||||||||||||||||||| Sbjct: 60672 tcaccgtcaagcagctcgtc 60691
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 cttccagaagaccaagctca 322 |||||||||||||||||||| Sbjct: 1037671 cttccagaagaccaagctca 1037652
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 cgtcgccaccggcaagccgg 505 |||||||||||||||||||| Sbjct: 3301339 cgtcgccaccggcaagccgg 3301358 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,250,003 Number of Sequences: 3902068 Number of extensions: 4250003 Number of successful extensions: 83228 Number of sequences better than 10.0: 125 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81353 Number of HSP's gapped (non-prelim): 1827 length of query: 557 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 534 effective length of database: 17,143,297,704 effective search space: 9154520973936 effective search space used: 9154520973936 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
