| Clone Name | baal29n22 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SRS1_ORYSA (P83649) Salt-stress root protein RS1 | 120 | 2e-27 | 2 | RAD52_EMENI (Q96UP6) DNA repair and recombination protein radC (... | 29 | 8.6 | 3 | MOAA_ERWCT (Q6D3C7) Molybdenum cofactor biosynthesis protein A | 29 | 8.6 |
|---|
>SRS1_ORYSA (P83649) Salt-stress root protein RS1| Length = 204 Score = 120 bits (301), Expect = 2e-27 Identities = 68/124 (54%), Positives = 74/124 (59%), Gaps = 1/124 (0%) Frame = +2 Query: 89 MTSVWKTKVLPGLSXXXXXXXXXXXXXEFLKSFNXXXXXXXXXXXXTELEPKVVETIEAS 268 MTSVWKTKVL GL+ EFLKSFN TELEPKVVE +E+S Sbjct: 1 MTSVWKTKVLTGLNKLFDKDGKKAAAAEFLKSFNKEEIGKEIDDKKTELEPKVVEVVESS 60 Query: 269 PPEXXXXXXXXXXXXXXX-NSAAVIKFLDEMAKIGFPGAKLVSDAVVKSGTTPLSPAIVF 445 PPE N AV KFL+E+AKI FPGAK VSDAV KSGTTPLSPAI F Sbjct: 61 PPEIKALLKDKKTASKIKKNGPAVTKFLEELAKIDFPGAKPVSDAVAKSGTTPLSPAIAF 120 Query: 446 ILDK 457 IL+K Sbjct: 121 ILEK 124
>RAD52_EMENI (Q96UP6) DNA repair and recombination protein radC (RAD52 homolog)| Length = 582 Score = 28.9 bits (63), Expect = 8.6 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = -2 Query: 124 PGENLGLPYARHIPLLQRCVLQIAGG*RDGCVVPXRQK 11 PG N GL R IPL QR +A G G VP +Q+ Sbjct: 339 PGSNGGLQNGRSIPLGQRASNGMATGSDAGAQVPIKQE 376
>MOAA_ERWCT (Q6D3C7) Molybdenum cofactor biosynthesis protein A| Length = 329 Score = 28.9 bits (63), Expect = 8.6 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = +1 Query: 76 EGEEYDERMEDQGSPRAQQVLRQGWQEGRRRR 171 EG E R G QQ+L+QGWQ+ +R R Sbjct: 198 EGGELFRRHHVSGEVIRQQLLQQGWQQQQRAR 229 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,119,936 Number of Sequences: 219361 Number of extensions: 694916 Number of successful extensions: 2001 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1980 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2000 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)