ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal29n19 |
|---|---|
| Clone Library Name | barley_pub |
>ZF2N2_ARATH (Q9SJM6) Zinc finger A20 and AN1 domains-containing protein| At2g36320 Length = 161 Score = 122 bits (306), Expect = 7e-28 Identities = 64/150 (42%), Positives = 90/150 (60%), Gaps = 1/150 (0%) Frame = +3 Query: 111 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVN 290 A EH+ C++ EG LCVNNCGFFGS+ATMN+CS C+ ++ +KQ+Q S+ +S ++ Sbjct: 2 AEEHR---CETPEGHRLCVNNCGFFGSSATMNLCSNCYGDLCLKQQQQASMKSTVESSLS 58 Query: 291 GGDA-VKEHLAAGSTAVAVAHVQAKALITAQPADIAGPSEAAMESPKGPSRCSTCRKRVG 467 A V E+ AA + K I P + P P+ P+RC+ CRKRVG Sbjct: 59 PVIAPVLENYAAELEIPTTKKTEEKKPIQI-PTEQPSP-------PQRPNRCTVCRKRVG 110 Query: 468 LTGFNCRCGNLYCATHRYSDKHECKFDYRA 557 LTGF CRCG +C +HRY + H C FD+++ Sbjct: 111 LTGFMCRCGTTFCGSHRYPEVHGCTFDFKS 140
>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein| At4g12040 Length = 175 Score = 107 bits (267), Expect = 2e-23 Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 15/149 (10%) Frame = +3 Query: 153 PILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGST 332 P LC N CGFFGS + MN+CSKC++ + +++Q +A + AVK L S Sbjct: 16 PKLCDNGCGFFGSPSNMNLCSKCYRSLRAEEDQTAVAKA----------AVKNSLKLPSC 65 Query: 333 AVAV-----------AHVQAKALITAQPADIAGPSEAAMESPKGP----SRCSTCRKRVG 467 ++ AH++ ++TA+P+ + +E P P +RC +C K+VG Sbjct: 66 SIIAPGQKHPLEIKPAHLET-VVVTAEPSSVPVAAEQDEAEPSRPVRPNNRCFSCNKKVG 124 Query: 468 LTGFNCRCGNLYCATHRYSDKHECKFDYR 554 + GF C+CG+ +C +HRY +KHEC FD++ Sbjct: 125 VMGFKCKCGSTFCGSHRYPEKHECSFDFK 153
>ZF2N1_ARATH (Q6NNI8) Zinc finger A20 and AN1 domains-containing protein| At1g12440 Length = 168 Score = 106 bits (265), Expect = 4e-23 Identities = 51/147 (34%), Positives = 80/147 (54%), Gaps = 1/147 (0%) Frame = +3 Query: 117 EHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGG 296 E ++ S P LCV CGFFGS + MN+CSKC++++ +EQ A ++ + +N Sbjct: 4 EQNDSTSFSPSEPKLCVKGCGFFGSPSNMNLCSKCYRDIRATEEQTASAKAAVEKSLNPN 63 Query: 297 DAVKEHLAAGSTAVAVAHVQAKALITAQPADIAGPSEAAMESPKGPS-RCSTCRKRVGLT 473 + + V + + T A P ++ PK + RC +C K+VG+T Sbjct: 64 KPKTQPQQSQEITQGVLGSGSSSSSTRGGDSAAAP----LDPPKSTATRCLSCNKKVGVT 119 Query: 474 GFNCRCGNLYCATHRYSDKHECKFDYR 554 GF CRCG+ +C THRY + HEC+FD++ Sbjct: 120 GFKCRCGSTFCGTHRYPESHECQFDFK 146
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 103 bits (257), Expect = 3e-22 Identities = 66/183 (36%), Positives = 89/183 (48%), Gaps = 47/183 (25%) Frame = +3 Query: 150 GPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQA-----------KLAASSFDSIVNGG 296 GP+LC CGF+G+ T MCS C+KE +Q+ + + +S + V Sbjct: 10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRA 69 Query: 297 DAVKEHL--AAGSTAVAVAHVQAKAL---------------------------ITAQPA- 386 DA + AAGST+ +V AL + QP+ Sbjct: 70 DAGLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSP 129 Query: 387 DIAGPS-----EAAMESPKGP-SRCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHECKFD 548 ++ PS E A E PK +RC CRK+VGLTGF+CRCGNL+C HRYSDKH C +D Sbjct: 130 SVSQPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYD 189 Query: 549 YRA 557 Y+A Sbjct: 190 YKA 192
>Z20D2_HUMAN (O76080) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 103 bits (256), Expect = 4e-22 Identities = 66/183 (36%), Positives = 89/183 (48%), Gaps = 47/183 (25%) Frame = +3 Query: 150 GPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL-----AASSFDSIVNGGDAVKE- 311 GP+LC CGF+G+ T MCS C+KE +Q+ + AS +S + +V+ Sbjct: 10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRA 69 Query: 312 -------HLAAGSTAVAVAHVQAKAL---------------------------ITAQPA- 386 AAGST+ +V AL + QP+ Sbjct: 70 DTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSP 129 Query: 387 DIAGPS-----EAAMESPKGP-SRCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHECKFD 548 ++ PS E A E PK +RC CRK+VGLTGF+CRCGNL+C HRYSDKH C +D Sbjct: 130 SVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYD 189 Query: 549 YRA 557 Y+A Sbjct: 190 YKA 192
>ISAP1_ORYSA (Q9LLX1) Multiple stress-responsive zinc-finger protein ISAP1| (Stress-associated protein 1) (OsISAP1) Length = 164 Score = 93.2 bits (230), Expect = 4e-19 Identities = 55/140 (39%), Positives = 72/140 (51%), Gaps = 7/140 (5%) Frame = +3 Query: 159 LCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAV 338 LC N+CGF G+ AT N+C C A A++S S ++ K+ + V Sbjct: 21 LCANSCGFPGNPATQNLCQNCFL--------AATASTSSPSSLSSPVLDKQPPRPAAPLV 72 Query: 339 AV-------AHVQAKALITAQPADIAGPSEAAMESPKGPSRCSTCRKRVGLTGFNCRCGN 497 A AL TA PA +A S +RCS CRKRVGLTGF CRCG+ Sbjct: 73 EPQAPLPPPVEEMASALATA-PAPVAKTSAV--------NRCSRCRKRVGLTGFRCRCGH 123 Query: 498 LYCATHRYSDKHECKFDYRA 557 L+C HRYSD+H C +DY++ Sbjct: 124 LFCGEHRYSDRHGCSYDYKS 143
>ZFAN3_RAT (Q5U2M7) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 54.7 bits (130), Expect = 2e-07 Identities = 48/180 (26%), Positives = 72/180 (40%), Gaps = 54/180 (30%) Frame = +3 Query: 174 CGFFGSAATMNMCSKCHKEMAMKQ-----------EQAKLAASSFDSIVNGGDAVKEHLA 320 CGF+GS+ TMN+CSKC + KQ Q+ L + S N L+ Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNSQSDLFSEETTSDNNNTSVTTPTLS 79 Query: 321 AGSTAVAV------------------AHVQAKALITAQP----ADIAGPSEAA------- 413 ++ AHV +LIT AD SEA+ Sbjct: 80 PSQQSLPTELNVTSPSEEECGPCTDTAHV---SLITPTKRSCGADSQSESEASPVKRPRL 136 Query: 414 MESPKGPS-----------RCSTCRKRVGLTGF---NCRCGNLYCATHRYSDKHECKFDY 551 +E+P+ P RC C+ ++ L +CRCG ++C HR ++H+C FD+ Sbjct: 137 VENPERPEESGRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDH 196
>ZFAN3_MOUSE (Q497H0) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 53.5 bits (127), Expect = 4e-07 Identities = 47/180 (26%), Positives = 72/180 (40%), Gaps = 54/180 (30%) Frame = +3 Query: 174 CGFFGSAATMNMCSKCHKEMAMKQ-----------EQAKLAASSFDSIVNGGDAVKEHLA 320 CGF+GS+ TMN+CSKC + KQ Q+ L + S N L+ Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNSQSDLFSEETTSDNNNTSVTTPTLS 79 Query: 321 AGSTAVAV------------------AHVQAKALITAQP----ADIAGPSEAA------- 413 ++ AHV +LIT AD +EA+ Sbjct: 80 PSQQSLPTELNVTSPSTEECGPCTDTAHV---SLITPTKRSCGADSQSENEASPVKRPRL 136 Query: 414 MESPKGPS-----------RCSTCRKRVGLTGF---NCRCGNLYCATHRYSDKHECKFDY 551 +E+P+ P RC C+ ++ L +CRCG ++C HR ++H+C FD+ Sbjct: 137 VENPERPEESGRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDH 196
>ZFAN3_HUMAN (Q9H8U3) AN1-type zinc finger protein 3 (Testis-expressed sequence| 27) Length = 227 Score = 52.4 bits (124), Expect = 9e-07 Identities = 45/183 (24%), Positives = 69/183 (37%), Gaps = 57/183 (31%) Frame = +3 Query: 174 CGFFGSAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAV--- 344 CGF+GS+ TMN+CSKC + KQ A S+ +S D E + + ++ Sbjct: 20 CGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNS---QSDLFSEETTSDNNNTSITTP 76 Query: 345 -----------------------------AHVQAKALIT---------AQPADIAGP--- 401 AHV +LIT +Q + A P Sbjct: 77 TLSPSQQPLPTELNVTSPSKEECGPCTDTAHV---SLITPTKRSCGTDSQSENEASPVKR 133 Query: 402 ----------SEAAMESPKGPSRCSTCRKRVGLTGF---NCRCGNLYCATHRYSDKHECK 542 E + K RC C+ ++ L +CRCG ++C HR ++H+C Sbjct: 134 PRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCT 193 Query: 543 FDY 551 FD+ Sbjct: 194 FDH 196
>ZFAN3_XENLA (Q66J85) AN1-type zinc finger protein 3 homolog| Length = 226 Score = 51.2 bits (121), Expect = 2e-06 Identities = 49/193 (25%), Positives = 73/193 (37%), Gaps = 51/193 (26%) Frame = +3 Query: 126 ETGCQSREGPILCVN-NCGFFGSAATMNMCSKCHKEMAMKQ-----------EQAKLAAS 269 +TG + P L CGF+GS+ TMN+CSKC + KQ Q+ L S Sbjct: 3 DTGSERSNAPSLPPRCPCGFWGSSKTMNLCSKCFADFQKKQPDEDTAPSTSSSQSDLFPS 62 Query: 270 SFDS----------IVNGGDAVKEHLAAGSTA-------VAVAHV------QAKALITAQ 380 DS VN + L S + AHV + +Q Sbjct: 63 ETDSDNGNTSIPTPTVNPTQQLPTELNVDSPSKEDCGPCTDSAHVSLTTPSKRSCDSDSQ 122 Query: 381 PADIAGPSE-------------AAMESPKGPSRCSTCRKRVGLTGF---NCRCGNLYCAT 512 D P + ++ K RC C+ ++ L +CRCG ++C Sbjct: 123 SEDDTSPMKRPRLLDSGDRPDNSSRSKQKSRRRCFRCQIKLELVQQELGSCRCGYVFCML 182 Query: 513 HRYSDKHECKFDY 551 HR ++H+C FD+ Sbjct: 183 HRLPEQHDCTFDH 195
>RABX5_BOVIN (O18973) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 492 Score = 37.0 bits (84), Expect = 0.038 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = +3 Query: 111 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 260 +++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 2 SLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQI 51
>RABX5_MOUSE (Q9JM13) Rab5 GDP/GTP exchange factor (Rabex-5)| Length = 491 Score = 37.0 bits (84), Expect = 0.038 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = +3 Query: 111 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 260 +++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 2 SLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQRQI 51
>RABX5_HUMAN (Q9UJ41) Rab5 GDP/GTP exchange factor (Rabaptin 5-associated| exchange factor for Rab5) (Rabex-5) Length = 708 Score = 37.0 bits (84), Expect = 0.038 Identities = 14/50 (28%), Positives = 26/50 (52%) Frame = +3 Query: 111 AMEHKETGCQSREGPILCVNNCGFFGSAATMNMCSKCHKEMAMKQEQAKL 260 +++ + G + +LC CG++G+ A CSKC +E K Q ++ Sbjct: 140 SLKSERRGIHVDQSDLLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQI 189
>CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 33.5 bits (75), Expect = 0.41 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +3 Query: 171 NCGFFGSAATMNMCSKCHKEMAMKQEQAKLA 263 NC F+G A T + CS C++E ++ +A+ A Sbjct: 894 NCAFYGRAETEHFCSYCYREELRRRREARAA 924
>CEZ2_HUMAN (Q8TE49) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 32.0 bits (71), Expect = 1.2 Identities = 11/29 (37%), Positives = 19/29 (65%) Frame = +3 Query: 171 NCGFFGSAATMNMCSKCHKEMAMKQEQAK 257 NC F+G A T + CS C++E ++ +A+ Sbjct: 894 NCAFYGRAETEHYCSYCYREELRRRREAR 922
>MSTAA_DROME (O46040) Protein msta, isoform A| Length = 462 Score = 32.0 bits (71), Expect = 1.2 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 3/86 (3%) Frame = +3 Query: 303 VKEHLAAGSTAVAVAHVQAKALITAQPADIAGPSEAAMESPKGP-SRCSTCRKRVGLTGF 479 + AG A + A LI + A + GP+ + KG S C C + + TGF Sbjct: 59 ISSSTVAGRGVFATRDIAAGELIFQERALVTGPT-----ARKGQLSSCICCHETLPQTGF 113 Query: 480 NC--RCGNLYCATHRYSDKHECKFDY 551 C RC C T S++H+ + ++ Sbjct: 114 LCRHRCTLPVCETCSDSEEHQAECEH 139
>SNX18_MOUSE (Q91ZR2) Sorting nexin-18 (Sorting nexin-associated Golgi protein| 1) Length = 614 Score = 31.6 bits (70), Expect = 1.6 Identities = 14/24 (58%), Positives = 18/24 (75%) Frame = +2 Query: 395 WSQRGGHGEPQRPKPVQHLQKEGR 466 WSQ GHGEPQ P+ + HL++ GR Sbjct: 208 WSQELGHGEPQ-PQSLLHLRQVGR 230
>CEZ1_HUMAN (Q6GQQ9) Zinc finger A20 domain-containing protein 1 (EC 3.-.-.-)| (Cellular zinc finger anti-NF-kappa B protein) (Zinc finger protein Cezanne) Length = 843 Score = 31.2 bits (69), Expect = 2.1 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +3 Query: 171 NCGFFGSAATMNMCSKCHKEMAMKQEQ 251 NC F+G T N CS C++E ++E+ Sbjct: 806 NCSFYGHPETNNFCSCCYREELRRRER 832
>PEP7_YEAST (P32609) Vacuolar segregation protein PEP7 (Protein VAC1) (Vacuolar| protein sorting 19) Length = 515 Score = 31.2 bits (69), Expect = 2.1 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 3/33 (9%) Frame = +3 Query: 426 KGPSRCSTCRKRVG--LTGFNCR-CGNLYCATH 515 KG S C TC + + + NCR CG LYC H Sbjct: 73 KGKSCCHTCGRTLNNNIGAINCRKCGKLYCRRH 105
>FA43B_HUMAN (Q6ZT52) Protein FAM43B| Length = 329 Score = 30.8 bits (68), Expect = 2.7 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 6/80 (7%) Frame = +3 Query: 207 MCSKCHKEMAMKQ--EQAKLAA-SSFDSIVNGGDAV---KEHLAAGSTAVAVAHVQAKAL 368 + ++ HK A+ + Q LAA S F + DA ++HL AG A +V + L Sbjct: 180 LLARAHKARALARLLRQTALAAFSDFKRLQRQSDARHVRQQHLRAGGAAASVPRAPLRRL 239 Query: 369 ITAQPADIAGPSEAAMESPK 428 + A+ A PSE + +P+ Sbjct: 240 LNAKCAYRPPPSERSRGAPR 259
>ECAR_ECHCA (Q90495) Ecarin precursor (EC 3.4.24.-)| Length = 616 Score = 30.8 bits (68), Expect = 2.7 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 7/41 (17%) Frame = +3 Query: 450 CRKRVGLTG--FNC-----RCGNLYCATHRYSDKHECKFDY 551 C K +G G F C +CG LYC + + CK DY Sbjct: 542 CTKEIGYYGKRFPCAPQDVKCGRLYCLDNSFKKNMRCKNDY 582
>HXA13_HUMAN (P31271) Homeobox protein Hox-A13 (Hox-1J)| Length = 388 Score = 30.4 bits (67), Expect = 3.5 Identities = 30/88 (34%), Positives = 40/88 (45%) Frame = +3 Query: 189 SAATMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKAL 368 +AA ++C MA A AAS++ S G+A AA + A A A A A Sbjct: 77 AAAAAAAANQCRNLMAHPAPLAPGAASAYSSAP--GEAPPSAAAAAAAAAAAAAAAAAAS 134 Query: 369 ITAQPADIAGPSEAAMESPKGPSRCSTC 452 + P AGP AA E+ K +CS C Sbjct: 135 SSGGPGP-AGP--AAAEAAK---QCSPC 156
>SINA1_ARATH (P93748) Putative ubiquitin ligase SINAT1 (EC 6.3.2.-) (Seven in| absentia homolog 1) Length = 305 Score = 30.4 bits (67), Expect = 3.5 Identities = 27/98 (27%), Positives = 35/98 (35%), Gaps = 26/98 (26%) Frame = +3 Query: 291 GGDAVKEHLAAGSTAVAVAHVQAKALITAQPADIAGPSEAAMES---------------- 422 GG A+KE L + ST V AK ++P S S Sbjct: 4 GGSALKEALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKFHSSNGVYELLECPVCTNL 63 Query: 423 --------PKGPSRCSTCRKRVGLTGFNCR--CGNLYC 506 P G + CS+C+ RV T CR GN+ C Sbjct: 64 MYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRC 101
>RVXX_VIPLE (Q7T046) Coagulation factor X-activating enzyme heavy chain| precursor (EC 3.4.24.58) (VLFXA heavy chain) (Coagulation factor X-activating enzyme alpha-chain) [Contains: Coagulation factor X-activating enzyme heavy chain alternate form] Length = 612 Score = 30.0 bits (66), Expect = 4.6 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%) Frame = +3 Query: 417 ESPKGPSRCSTCRKRVG----LTGFNCRCGNLYCATHRYSDKHECKFDYR 554 E+ KG S CRK G + +CG LYC + +K+ CK YR Sbjct: 530 ENQKG-SYYGYCRKENGRKIPCAPQDIKCGRLYCLDNSPGNKNPCKMHYR 578
>MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding| protein MBD2) (Demethylase) (DMTase) Length = 411 Score = 30.0 bits (66), Expect = 4.6 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +2 Query: 317 CCWQHSGGSCSRSGEGADHRTAC*HRWSQRGGHGEPQRPKPVQHLQKEG 463 CC + G + G GA +A ++GG G P PV +++EG Sbjct: 10 CCPEQEEGESAAGGSGAGGDSAI-----EQGGQGSALAPSPVSGVRREG 53
>MBD2_MOUSE (Q9Z2E1) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding| protein MBD2) Length = 414 Score = 30.0 bits (66), Expect = 4.6 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +2 Query: 317 CCWQHSGGSCSRSGEGADHRTAC*HRWSQRGGHGEPQRPKPVQHLQKEG 463 CC + G + G GA +A ++GG G P PV +++EG Sbjct: 10 CCPEQEEGESAAGGSGAGGDSAI-----EQGGQGSALAPSPVSGVRREG 53
>ATRX_DROME (Q9GQN5) Transcriptional regulator ATRX homolog (EC 3.6.1.-)| (ATP-dependent helicase XNP) (X-linked nuclear protein) (dXNP) (d-xnp) Length = 1311 Score = 30.0 bits (66), Expect = 4.6 Identities = 22/82 (26%), Positives = 37/82 (45%) Frame = +3 Query: 225 KEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPADIAGPS 404 KE + + + +S +SI A KE + + A+ + + ++++ + A S Sbjct: 175 KEAQQTKPEKNSSKASKESIEKRQKAQKEATTSSARAIRSVNGTRRGSLSSERSSRASSS 234 Query: 405 EAAMESPKGPSRCSTCRKRVGL 470 A ESP P RC KRV L Sbjct: 235 RA--ESPPRPKRCVVRLKRVSL 254
>TBCE_BOVIN (Q32KS0) Tubulin-specific chaperone E (Tubulin-folding cofactor E)| Length = 528 Score = 30.0 bits (66), Expect = 4.6 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +2 Query: 350 RSGEGADHRTAC*HRWSQRGGHGEPQRPKP 439 R G D+R A + W + GGH +P++ +P Sbjct: 379 RRGAELDYRKAFGNEWKKAGGHQDPEKNRP 408
>RS3_ENCCU (Q8SQM3) 40S ribosomal protein S3| Length = 228 Score = 30.0 bits (66), Expect = 4.6 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 4/60 (6%) Frame = +3 Query: 237 MKQEQAKLAASSFDSIVNGGDAVKEHLAAG----STAVAVAHVQAKALITAQPADIAGPS 404 +K ++AK +++ GDAVK+++ G T V +Q + ++ P + GP+ Sbjct: 153 LKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLPYDPEGVLGPN 212
>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor| (LRP) (Alpha-2-macroglobulin receptor) (A2MR) Length = 4543 Score = 29.6 bits (65), Expect = 6.0 Identities = 19/68 (27%), Positives = 30/68 (44%) Frame = +3 Query: 336 VAVAHVQAKALITAQPADIAGPSEAAMESPKGPSRCSTCRKRVGLTGFNCRCGNLYCATH 515 +AVA+ ++ + G + + +PKG CS +RV F C+ N C H Sbjct: 2462 IAVANDTDSCELSPCRVNNGGCQDLCLLTPKGHVNCSCRGERVLQEDFTCKALNSTCNVH 2521 Query: 516 RYSDKHEC 539 D+ EC Sbjct: 2522 ---DEFEC 2526
>DNAK_CYAME (Q85FW4) Chaperone protein dnaK (Heat shock protein 70) (Heat shock| 70 kDa protein) (HSP70) Length = 607 Score = 29.6 bits (65), Expect = 6.0 Identities = 18/70 (25%), Positives = 26/70 (37%) Frame = +3 Query: 198 TMNMCSKCHKEMAMKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITA 377 T ++ +C K + AKL+ D +V L GST + K L+ Sbjct: 304 TSDLIERCRKPVEQALTDAKLSKQDIDEVV---------LVGGSTRIPAVQQLVKDLLGK 354 Query: 378 QPADIAGPSE 407 QP P E Sbjct: 355 QPNQSVNPDE 364
>DLL4_MOUSE (Q9JI71) Delta-like protein 4 precursor (Drosophila Delta homolog| 4) Length = 686 Score = 26.6 bits (57), Expect(2) = 7.4 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +3 Query: 426 KGPSRCSTCRKRVGLTGFNCRCGNLYCA 509 +GPSR TCR R G TG +C CA Sbjct: 421 RGPSR--TCRCRPGFTGTHCELHISDCA 446 Score = 21.2 bits (43), Expect(2) = 7.4 Identities = 8/25 (32%), Positives = 13/25 (52%) Frame = +2 Query: 311 APCCWQHSGGSCSRSGEGADHRTAC 385 +PC +GGSC +G+ + C Sbjct: 370 SPC---FNGGSCRERNQGSSYACEC 391
>TBCE_RAT (Q5FVQ9) Tubulin-specific chaperone E (Tubulin-folding cofactor E)| Length = 524 Score = 29.3 bits (64), Expect = 7.8 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +2 Query: 350 RSGEGADHRTAC*HRWSQRGGHGEPQRPKP 439 R G D+R A W + GGH +P R +P Sbjct: 375 RRGAELDYRKAFGKEWRKAGGHPDPDRNRP 404
>LCE1D_HUMAN (Q5T752) Late cornified envelope protein 1D (Late envelope protein| 4) Length = 114 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +2 Query: 278 QHRQRWRCGERAPCCWQHSGGSCSRSGEGADHRTAC 385 +HR R + + CC Q SGGS G + H C Sbjct: 78 RHRSHRRRPQSSDCCSQPSGGSSCCGGGSSQHSGGC 113
>ZFN2B_MOUSE (Q91X58) AN1-type zinc finger protein 2B| Length = 257 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = +3 Query: 444 STCRKRVGLTGFNCRCGNLYCATHRYSDKHEC 539 S CR+R + RCG +C HR+ HEC Sbjct: 103 SGCRQREMMKLTCDRCGRNFCIKHRHPLDHEC 134
>IF37_SCHPO (O94236) Eukaryotic translation initiation factor 3 subunit 7| homolog (Microtubule-destabilizing protein moe1) Length = 567 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/65 (24%), Positives = 31/65 (47%) Frame = +3 Query: 237 MKQEQAKLAASSFDSIVNGGDAVKEHLAAGSTAVAVAHVQAKALITAQPADIAGPSEAAM 416 MK KLA + ++++ G D++K + S A H ++ +PAD+A ++ Sbjct: 451 MKNNSCKLARWTVEALLAGVDSMKVGFVSRSNARDAQHHGILGVVAYKPADLASQMNLSL 510 Query: 417 ESPKG 431 + G Sbjct: 511 SNGWG 515
>HM14_CAEEL (P20271) Homeobox protein ceh-14| Length = 351 Score = 29.3 bits (64), Expect = 7.8 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 438 RCSTCRKRVGLTGFNCRCGNLYCATHRY 521 RCSTC+ +G T F R ++YC H Y Sbjct: 74 RCSTCKDELGATCF-LREDSMYCRAHFY 100
>NOTC2_MOUSE (O35516) Neurogenic locus notch homolog protein 2 precursor (Notch| 2) (Motch B) [Contains: Notch 2 extracellular truncation; Notch 2 intracellular domain] Length = 2470 Score = 23.9 bits (50), Expect(2) = 8.5 Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 5/48 (10%) Frame = +2 Query: 299 CGERAPCCWQHSGGSCSRSGEG-----ADHRTAC*HRWSQRGGHGEPQ 427 C C H+G R EG HR C Q GG PQ Sbjct: 35 CVNEGTCVTYHNGTGFCRCPEGFLGEYCQHRDPCEKNRCQNGGTCVPQ 82 Score = 23.5 bits (49), Expect(2) = 8.5 Identities = 13/39 (33%), Positives = 17/39 (43%) Frame = +3 Query: 423 PKGPSRCSTCRKRVGLTGFNCRCGNLYCATHRYSDKHEC 539 P+G +TCR G TG +C +YS H C Sbjct: 81 PQGMLGKATCRCAPGFTGEDC----------QYSTSHPC 109 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,502,138 Number of Sequences: 219361 Number of extensions: 1325288 Number of successful extensions: 4667 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 4357 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4652 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
