ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal29n16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479460.1| Oryza sativa (japonica cultivar-group), mRNA 161 3e-36
2gb|AY105575.1| Zea mays PCO097845 mRNA sequence 127 5e-26
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
4dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
5emb|Y11199.1|SEERYGENE S.erythraea erythromycin gene cluster DNA 46 0.14
6gb|U77459.1|SEU77459 Saccharopolyspora erythraea EryBIV (eryBIV)... 46 0.14
7dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.55
8ref|XM_366810.1| Magnaporthe grisea 70-15 chromosome VII hypothe... 42 2.2
9gb|AC133190.2| Mus musculus BAC clone RP23-375H9 from chromosome... 42 2.2
10gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosom... 42 2.2
11emb|CR932039.2| Medicago truncatula chromosome 5 clone mth2-6h11... 42 2.2
12gb|AC102318.8| Mus musculus chromosome 7, clone RP24-447C20, com... 40 8.6
13gb|AY572782.1| Arabidopsis thaliana CDC48-interacting UBX-domain... 40 8.6
14ref|NM_126226.3| Arabidopsis thaliana pux2 (PLANT UBX DOMAIN-CON... 40 8.6
15gb|AC165256.2| Mus musculus BAC clone RP23-216O10 from chromosom... 40 8.6
16ref|XM_471044.1| Oryza sativa (japonica cultivar-group), predic... 40 8.6
17ref|NM_190796.1| Oryza sativa (japonica cultivar-group), predic... 40 8.6
18ref|XM_514246.1| PREDICTED: Pan troglodytes 1D-myo-inositol-tris... 40 8.6
19gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 8.6
20gb|AC107720.16| Mus musculus chromosome 5, clone RP23-188F20, co... 40 8.6
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.6
22ref|XM_847046.1| PREDICTED: Canis familiaris hypothetical protei... 40 8.6
23gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, c... 40 8.6
24emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome 40 8.6
25emb|CT010577.7| Mouse DNA sequence from clone RP23-318D14 on chr... 40 8.6
26gb|AC132229.3| Mus musculus BAC clone RP24-484C7 from chromosome... 40 8.6
27gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosom... 40 8.6
28gb|BC015009.1| Homo sapiens inositol 1,4,5-trisphosphate 3-kinas... 40 8.6
29ref|NM_019807.2| Mus musculus acid phosphatase, prostate (Acpp),... 40 8.6
30ref|NM_207668.2| Mus musculus acid phosphatase, prostate (Acpp),... 40 8.6
31emb|AL591803.10| Human DNA sequence from clone RP11-758C21 on ch... 40 8.6
32emb|AL365444.11| Human DNA sequence from clone RP11-115P16 on ch... 40 8.6
33gb|AC116036.3| Homo sapiens chromosome 3 clone RP11-359I18, comp... 40 8.6
34gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genom... 40 8.6
35emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome... 40 8.6
36emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 8.6
37emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4,... 40 8.6
38ref|NM_170247.1| Drosophila melanogaster Lnk CG17367-RC, transcr... 40 8.6
39ref|NM_170246.1| Drosophila melanogaster Lnk CG17367-RA, transcr... 40 8.6
40ref|NM_143181.2| Drosophila melanogaster Lnk CG17367-RB, transcr... 40 8.6
41gb|AC006069.3| Arabidopsis thaliana chromosome 2 clone T8O11 map... 40 8.6
42gb|AY069404.1| Drosophila melanogaster LD10453 full length cDNA 40 8.6
43dbj|AK076383.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 8.6
44gb|AC008209.5|AC008209 Drosophila melanogaster, chromosome 3R, r... 40 8.6
45emb|BX530029.5| Zebrafish DNA sequence from clone CH211-153J15 i... 40 8.6
46dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
47dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
48dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
49dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
50emb|BX820882.1|CNS0A9KA Arabidopsis thaliana Full-length cDNA Co... 40 8.6
51emb|BX820565.1|CNS0A9MJ Arabidopsis thaliana Full-length cDNA Co... 40 8.6
52emb|BX818883.1|CNS0A9PY Arabidopsis thaliana Full-length cDNA Co... 40 8.6
53emb|BX820048.1|CNS0A9G1 Arabidopsis thaliana Full-length cDNA Co... 40 8.6
54gb|AC010120.5|AC010120 Drosophila melanogaster, chromosome 3R, r... 40 8.6
55gb|BT005408.1| Arabidopsis thaliana clone U51117 unknown protein... 40 8.6
56gb|AY084317.1| Arabidopsis thaliana clone 103882 mRNA, complete ... 40 8.6
57dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
58gb|AC135507.2| Homo sapiens chromosome 3 clone RP11-802O23, comp... 40 8.6
59dbj|AP004733.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
60dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
61dbj|AK118911.1| Arabidopsis thaliana At2g01650 mRNA for unknown ... 40 8.6
62dbj|AK101725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
63dbj|AK070637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
64gb|AF101159.1|AF101159 Drosophila melanogaster Lnk-like protein ... 40 8.6
65gb|AF101158.1|AF101158 Drosophila melanogaster Lnk-like mRNA seq... 40 8.6
66dbj|AK064743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
67gb|AE003754.4| Drosophila melanogaster chromosome 3R, section 92... 40 8.6
68gb|AC160119.3| Mus musculus BAC clone RP23-431F16 from chromosom... 40 8.6
69dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 8.6
70emb|AJ304861.1|MMU304861 Mus musculus partial Bfsp2 gene for pha... 40 8.6
71dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6 
>ref|XM_479460.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 429

 Score =  161 bits (81), Expect = 3e-36
 Identities = 138/157 (87%)
 Strand = Plus / Plus

                                                                       
Query: 107 tcgagccgctggacgcgcgcatcaaggagctgacctcgtcgcagggagagctgctggcca 166
           |||||| | ||||||||||||||||||||||||||||||||||||| ||| |||||| ||
Sbjct: 68  tcgagcagttggacgcgcgcatcaaggagctgacctcgtcgcagggggagttgctggaca 127

                                                                       
Query: 167 ggatccagaagctcaaacaggaggtgcagaattggcgctccaatgtcgaggcgcaggtca 226
           |||||||||||||||||| |||||||||||| |||||||||||  ||||| | |||||||
Sbjct: 128 ggatccagaagctcaaactggaggtgcagaactggcgctccaacctcgagacacaggtca 187

                                                
Query: 227 agacctgccacaacgagcttgtggaggtgaaggaggg 263
           ||||  |||| || || ||| ||||| ||||| ||||
Sbjct: 188 agacaagccagaatgaacttttggagctgaagaaggg 224
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>gb|AY105575.1| Zea mays PCO097845 mRNA sequence
          Length = 506

 Score =  127 bits (64), Expect = 5e-26
 Identities = 109/124 (87%)
 Strand = Plus / Plus

                                                                       
Query: 107 tcgagccgctggacgcgcgcatcaaggagctgacctcgtcgcagggagagctgctggcca 166
           |||||| ||| |||| |||  ||||||||||||||||||||||||  ||| ||||||  |
Sbjct: 170 tcgagcagctagacgggcgagtcaaggagctgacctcgtcgcaggcggagttgctggaga 229

                                                                       
Query: 167 ggatccagaagctcaaacaggaggtgcagaattggcgctccaatgtcgaggcgcaggtca 226
           ||||||||||||| ||||| ||||||||||| |||||||||||||| ||| |||||||||
Sbjct: 230 ggatccagaagctgaaacatgaggtgcagaactggcgctccaatgtagagacgcaggtca 289

               
Query: 227 agac 230
           ||||
Sbjct: 290 agac 293
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                      
Query: 131      aggagctgacctcgtcgcagggagagctgctggccaggatccagaagctcaaac 184
                |||||||||||||||||||||| ||| |||||| ||||||||||||||||||||
Sbjct: 28318542 aggagctgacctcgtcgcagggggagttgctggacaggatccagaagctcaaac 28318595



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 184      caggaggtgcagaattggcgctccaatgtcgaggcgcaggtcaagac 230
                |||||||||||||| |||||||||||  ||||| | |||||||||||
Sbjct: 28318724 caggaggtgcagaactggcgctccaacctcgagacacaggtcaagac 28318770
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>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0470D12
          Length = 157248

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                   
Query: 131   aggagctgacctcgtcgcagggagagctgctggccaggatccagaagctcaaac 184
             |||||||||||||||||||||| ||| |||||| ||||||||||||||||||||
Sbjct: 44105 aggagctgacctcgtcgcagggggagttgctggacaggatccagaagctcaaac 44158



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 184   caggaggtgcagaattggcgctccaatgtcgaggcgcaggtcaagac 230
             |||||||||||||| |||||||||||  ||||| | |||||||||||
Sbjct: 44287 caggaggtgcagaactggcgctccaacctcgagacacaggtcaagac 44333
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>emb|Y11199.1|SEERYGENE S.erythraea erythromycin gene cluster DNA
          Length = 8160

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 95   tgtcgggcgggctcgagccgctg 117
            |||||||||||||||||||||||
Sbjct: 6639 tgtcgggcgggctcgagccgctg 6661
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>gb|U77459.1|SEU77459 Saccharopolyspora erythraea EryBIV (eryBIV), EryBV (eryBV), EryCVI
            (eryCVI), EryBVI (eryBVI), EryCIV (eryCIV), EryCV (eryCV)
            and EryBVII (eryBVII) genes, complete cds and EryAI
            (eryAI) and EryK (eryK) genes, partial cds
          Length = 8340

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 95   tgtcgggcgggctcgagccgctg 117
            |||||||||||||||||||||||
Sbjct: 6755 tgtcgggcgggctcgagccgctg 6777
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 59      cgcctcctgctccgccgccggcgact 84
               |||| |||||||||||||||||||||
Sbjct: 5055085 cgccacctgctccgccgccggcgact 5055110
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>ref|XM_366810.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein
            (MG02886.4) partial mRNA
          Length = 1359

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 154  gagctgctggccaggatccag 174
            |||||||||||||||||||||
Sbjct: 1168 gagctgctggccaggatccag 1188
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>gb|AC133190.2| Mus musculus BAC clone RP23-375H9 from chromosome 10, complete sequence
          Length = 151273

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 310    aggtctgccctccaggaagag 330
              |||||||||||||||||||||
Sbjct: 141030 aggtctgccctccaggaagag 141050
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>gb|AC160970.7| Mus musculus BAC clone RP24-492D11 from chromosome 10, complete
             sequence
          Length = 205283

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 310   aggtctgccctccaggaagag 330
             |||||||||||||||||||||
Sbjct: 68534 aggtctgccctccaggaagag 68554
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>emb|CR932039.2| Medicago truncatula chromosome 5 clone mth2-6h11, COMPLETE SEQUENCE
          Length = 132508

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 499   acccagaaaattaggcaaatacatagtac 527
             |||||||| ||||| ||||||||||||||
Sbjct: 96800 acccagaatattagacaaatacatagtac 96772
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>gb|AC102318.8| Mus musculus chromosome 7, clone RP24-447C20, complete sequence
          Length = 145005

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   gagcaaacagggcagacaca 368
             ||||||||||||||||||||
Sbjct: 41511 gagcaaacagggcagacaca 41530
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>gb|AY572782.1| Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX2)
            mRNA, complete cds
          Length = 1377

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  caggatccagaagctcaaac 184
            ||||||||||||||||||||
Sbjct: 1198 caggatccagaagctcaaac 1179
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>ref|NM_126226.3| Arabidopsis thaliana pux2 (PLANT UBX DOMAIN-CONTAINING PROTEIN 2);
            nucleic acid binding / zinc ion binding AT2G01650 (pux2)
            mRNA, complete cds
          Length = 1655

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  caggatccagaagctcaaac 184
            ||||||||||||||||||||
Sbjct: 1297 caggatccagaagctcaaac 1278
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>gb|AC165256.2| Mus musculus BAC clone RP23-216O10 from chromosome 9, complete sequence
          Length = 231728

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 445    ccctgattcaaacagaactt 464
              ||||||||||||||||||||
Sbjct: 130169 ccctgattcaaacagaactt 130188
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>ref|XM_471044.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 645

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 59  cgcctcctgctccgccgccg 78
           ||||||||||||||||||||
Sbjct: 525 cgcctcctgctccgccgccg 506
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>ref|NM_190796.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1356

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                      
Query: 56 ctccgcctcctgctccgccgccggcgac 83
          ||||||||||  ||||||||||||||||
Sbjct: 37 ctccgcctccgcctccgccgccggcgac 10
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>ref|XM_514246.1| PREDICTED: Pan troglodytes 1D-myo-inositol-trisphosphate 3-kinase B
           (LOC457789), mRNA
          Length = 2189

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 62  ctcctgctccgccgccggcg 81
           ||||||||||||||||||||
Sbjct: 154 ctcctgctccgccgccggcg 135
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 210     tgtcgaggcgcaggtcaaga 229
               ||||||||||||||||||||
Sbjct: 2012392 tgtcgaggcgcaggtcaaga 2012373
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>gb|AC107720.16| Mus musculus chromosome 5, clone RP23-188F20, complete sequence
          Length = 206182

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    agagctgctggccaggatcc 172
              ||||||||||||||||||||
Sbjct: 168320 agagctgctggccaggatcc 168339
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 242      agcttgtggaggtgaaggag 261
                ||||||||||||||||||||
Sbjct: 35974528 agcttgtggaggtgaaggag 35974547
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>ref|XM_847046.1| PREDICTED: Canis familiaris hypothetical protein LOC609723
            (LOC609723), mRNA
          Length = 1656

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   cctcctgctccgccgccggc 80
            ||||||||||||||||||||
Sbjct: 1317 cctcctgctccgccgccggc 1336
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>gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, complete sequence
          Length = 250215

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 499    acccagaaaattaggcaaat 518
              ||||||||||||||||||||
Sbjct: 189320 acccagaaaattaggcaaat 189301
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>emb|AJ965256.1| Dehalococcoides sp. CBDB1 complete genome
          Length = 1395502

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    cagggagagctgctggccag 167
              ||||||||||||||||||||
Sbjct: 395787 cagggagagctgctggccag 395806
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>emb|CT010577.7| Mouse DNA sequence from clone RP23-318D14 on chromosome 14, complete
             sequence
          Length = 195351

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   acccagaaaattaggcaaat 518
             ||||||||||||||||||||
Sbjct: 24760 acccagaaaattaggcaaat 24741
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>gb|AC132229.3| Mus musculus BAC clone RP24-484C7 from chromosome 5, complete sequence
          Length = 170292

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 153   agagctgctggccaggatcc 172
             ||||||||||||||||||||
Sbjct: 47135 agagctgctggccaggatcc 47154
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>gb|AC127422.4| Mus musculus BAC clone RP24-383K20 from chromosome 9, complete sequence
          Length = 198803

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 268   gcttctgaagtgcagcacct 287
             ||||||||||||||||||||
Sbjct: 31166 gcttctgaagtgcagcacct 31185
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>gb|BC015009.1| Homo sapiens inositol 1,4,5-trisphosphate 3-kinase B, mRNA (cDNA
           clone MGC:23636 IMAGE:4862726), complete cds
          Length = 3010

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 62  ctcctgctccgccgccggcg 81
           ||||||||||||||||||||
Sbjct: 302 ctcctgctccgccgccggcg 283
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>ref|NM_019807.2| Mus musculus acid phosphatase, prostate (Acpp), transcript variant
           2, mRNA
          Length = 2667

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 268 gcttctgaagtgcagcacct 287
           ||||||||||||||||||||
Sbjct: 10  gcttctgaagtgcagcacct 29
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>ref|NM_207668.2| Mus musculus acid phosphatase, prostate (Acpp), transcript variant
           1, mRNA
          Length = 4488

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 268 gcttctgaagtgcagcacct 287
           ||||||||||||||||||||
Sbjct: 10  gcttctgaagtgcagcacct 29
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>emb|AL591803.10| Human DNA sequence from clone RP11-758C21 on chromosome 6 Contains
             dehydrogenase/reductase (SDR family) member 6 (DHRS6)
             pseudogene, complete sequence
          Length = 90325

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   tgcttctgaagtgcagcacc 286
             ||||||||||||||||||||
Sbjct: 74135 tgcttctgaagtgcagcacc 74154
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>emb|AL365444.11| Human DNA sequence from clone RP11-115P16 on chromosome 1 Contains the
             3' UTR of a novel gene (DKFZp761P211), the ITPKB gene for
             inositol 1,4,5-trisphosphate 3-kinase B, two novel genes,
             a ribosomal protein S27 (metallopanstimulin 1) (RPS27)
             pseudogene and a CpG island, complete sequence
          Length = 181144

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    ctcctgctccgccgccggcg 81
             ||||||||||||||||||||
Sbjct: 49983 ctcctgctccgccgccggcg 49964
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>gb|AC116036.3| Homo sapiens chromosome 3 clone RP11-359I18, complete sequence
          Length = 178119

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   ggtctgccctccaggaagag 330
             ||||||||||||||||||||
Sbjct: 12689 ggtctgccctccaggaagag 12708
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>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete
             sequence
          Length = 164179

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   agcttgtggaggtgaaggag 261
             ||||||||||||||||||||
Sbjct: 36039 agcttgtggaggtgaaggag 36058
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>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13
          Length = 347496

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    tgtcgaggcgcaggtcaaga 229
              ||||||||||||||||||||
Sbjct: 283715 tgtcgaggcgcaggtcaaga 283696
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>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             7/14
          Length = 291050

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tgtcgaggcgcaggtcaaga 229
             ||||||||||||||||||||
Sbjct: 91430 tgtcgaggcgcaggtcaaga 91411
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>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03,
             complete sequence
          Length = 140948

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    cgcctcctgctccgccgccg 78
             ||||||||||||||||||||
Sbjct: 66820 cgcctcctgctccgccgccg 66839
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>ref|NM_170247.1| Drosophila melanogaster Lnk CG17367-RC, transcript variant C (Lnk),
            mRNA
          Length = 3293

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   tccgcctcctgctccgccgc 76
            ||||||||||||||||||||
Sbjct: 2752 tccgcctcctgctccgccgc 2733
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>ref|NM_170246.1| Drosophila melanogaster Lnk CG17367-RA, transcript variant A (Lnk),
            mRNA
          Length = 3045

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   tccgcctcctgctccgccgc 76
            ||||||||||||||||||||
Sbjct: 2504 tccgcctcctgctccgccgc 2485
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>ref|NM_143181.2| Drosophila melanogaster Lnk CG17367-RB, transcript variant B (Lnk),
            mRNA
          Length = 2919

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   tccgcctcctgctccgccgc 76
            ||||||||||||||||||||
Sbjct: 2378 tccgcctcctgctccgccgc 2359
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>gb|AC006069.3| Arabidopsis thaliana chromosome 2 clone T8O11 map rga, complete
             sequence
          Length = 89138

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   caggatccagaagctcaaac 184
             ||||||||||||||||||||
Sbjct: 74416 caggatccagaagctcaaac 74397
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>gb|AY069404.1| Drosophila melanogaster LD10453 full length cDNA
          Length = 2934

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   tccgcctcctgctccgccgc 76
            ||||||||||||||||||||
Sbjct: 2381 tccgcctcctgctccgccgc 2362
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>dbj|AK076383.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732480P03 product:acid phosphatase,
           prostate, full insert sequence
          Length = 4486

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 268 gcttctgaagtgcagcacct 287
           ||||||||||||||||||||
Sbjct: 17  gcttctgaagtgcagcacct 36
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>gb|AC008209.5|AC008209 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone
              BACR06K17, complete sequence
          Length = 169902

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     tccgcctcctgctccgccgc 76
              ||||||||||||||||||||
Sbjct: 165659 tccgcctcctgctccgccgc 165640
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>emb|BX530029.5| Zebrafish DNA sequence from clone CH211-153J15 in linkage group 17,
             complete sequence
          Length = 155612

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   cagaagctcaaacaggaggt 191
             ||||||||||||||||||||
Sbjct: 75162 cagaagctcaaacaggaggt 75143
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     cgcctcctgctccgccgccg 78
              ||||||||||||||||||||
Sbjct: 987101 cgcctcctgctccgccgccg 987120
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 61       cctcctgctccgccgccggc 80
                ||||||||||||||||||||
Sbjct: 24964884 cctcctgctccgccgccggc 24964903
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 242      agcttgtggaggtgaaggag 261
                ||||||||||||||||||||
Sbjct: 36064602 agcttgtggaggtgaaggag 36064621
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 56       ctccgcctcctgctccgccgccggcgac 83
                ||||||||||  ||||||||||||||||
Sbjct: 37756908 ctccgcctccgcctccgccgccggcgac 37756881
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>emb|BX820882.1|CNS0A9KA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH78ZE12 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1628

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  caggatccagaagctcaaac 184
            ||||||||||||||||||||
Sbjct: 1296 caggatccagaagctcaaac 1277
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>emb|BX820565.1|CNS0A9MJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH48ZG01 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1530

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  caggatccagaagctcaaac 184
            ||||||||||||||||||||
Sbjct: 1212 caggatccagaagctcaaac 1193
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>emb|BX818883.1|CNS0A9PY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB23ZA05 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1589

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  caggatccagaagctcaaac 184
            ||||||||||||||||||||
Sbjct: 1273 caggatccagaagctcaaac 1254
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>emb|BX820048.1|CNS0A9G1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS68ZD05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1579

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  caggatccagaagctcaaac 184
            ||||||||||||||||||||
Sbjct: 1278 caggatccagaagctcaaac 1259
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>gb|AC010120.5|AC010120 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone
             BACR22N13, complete sequence
          Length = 177376

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    tccgcctcctgctccgccgc 76
             ||||||||||||||||||||
Sbjct: 25087 tccgcctcctgctccgccgc 25068
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>gb|BT005408.1| Arabidopsis thaliana clone U51117 unknown protein (At2g01650) mRNA,
            complete cds
          Length = 1408

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  caggatccagaagctcaaac 184
            ||||||||||||||||||||
Sbjct: 1198 caggatccagaagctcaaac 1179
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>gb|AY084317.1| Arabidopsis thaliana clone 103882 mRNA, complete sequence
          Length = 1644

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  caggatccagaagctcaaac 184
            ||||||||||||||||||||
Sbjct: 1286 caggatccagaagctcaaac 1267
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>dbj|AP003235.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0039A07
          Length = 148892

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 56    ctccgcctcctgctccgccgccggcgac 83
             ||||||||||  ||||||||||||||||
Sbjct: 85209 ctccgcctccgcctccgccgccggcgac 85182
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>gb|AC135507.2| Homo sapiens chromosome 3 clone RP11-802O23, complete sequence
          Length = 171175

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 311    ggtctgccctccaggaagag 330
              ||||||||||||||||||||
Sbjct: 101047 ggtctgccctccaggaagag 101066
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>dbj|AP004733.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0023I22
          Length = 170029

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    cctcctgctccgccgccggc 80
             ||||||||||||||||||||
Sbjct: 17217 cctcctgctccgccgccggc 17236
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>dbj|AP003541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0530H05
          Length = 145952

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    cctcctgctccgccgccggc 80
             ||||||||||||||||||||
Sbjct: 59439 cctcctgctccgccgccggc 59458
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>dbj|AK118911.1| Arabidopsis thaliana At2g01650 mRNA for unknown protein, complete
            cds, clone: RAFL21-25-I03
          Length = 1646

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  caggatccagaagctcaaac 184
            ||||||||||||||||||||
Sbjct: 1289 caggatccagaagctcaaac 1270
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>dbj|AK101725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061C03, full
           insert sequence
          Length = 1463

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 61  cctcctgctccgccgccggc 80
           ||||||||||||||||||||
Sbjct: 113 cctcctgctccgccgccggc 94
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>dbj|AK070637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056J01, full
           insert sequence
          Length = 2649

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 242 agcttgtggaggtgaaggag 261
           ||||||||||||||||||||
Sbjct: 139 agcttgtggaggtgaaggag 120
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>gb|AF101159.1|AF101159 Drosophila melanogaster Lnk-like protein mRNA, partial cds
          Length = 1478

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 57  tccgcctcctgctccgccgc 76
           ||||||||||||||||||||
Sbjct: 911 tccgcctcctgctccgccgc 892
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>gb|AF101158.1|AF101158 Drosophila melanogaster Lnk-like mRNA sequence
          Length = 2224

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   tccgcctcctgctccgccgc 76
            ||||||||||||||||||||
Sbjct: 1665 tccgcctcctgctccgccgc 1646
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>dbj|AK064743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E01, full
           insert sequence
          Length = 2017

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 56  ctccgcctcctgctccgccgccggcgac 83
           ||||||||||  ||||||||||||||||
Sbjct: 218 ctccgcctccgcctccgccgccggcgac 191
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>gb|AE003754.4| Drosophila melanogaster chromosome 3R, section 92 of 118 of the
            complete sequence
          Length = 214365

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   tccgcctcctgctccgccgc 76
            ||||||||||||||||||||
Sbjct: 4711 tccgcctcctgctccgccgc 4692
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>gb|AC160119.3| Mus musculus BAC clone RP23-431F16 from chromosome 9, complete sequence
          Length = 190900

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    gcttctgaagtgcagcacct 287
              ||||||||||||||||||||
Sbjct: 114388 gcttctgaagtgcagcacct 114369
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 141    ctcgtcgcagggagagctgctggc 164
              ||||| ||||||||||||||||||
Sbjct: 578490 ctcgtggcagggagagctgctggc 578467
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>emb|AJ304861.1|MMU304861 Mus musculus partial Bfsp2 gene for phakinin (CP49 protein), exon 1
          Length = 24180

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 445  ccctgattcaaacagaactt 464
            ||||||||||||||||||||
Sbjct: 9305 ccctgattcaaacagaactt 9324
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>dbj|AP003566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0008G24
          Length = 152736

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 56    ctccgcctcctgctccgccgccggcgac 83
             ||||||||||  ||||||||||||||||
Sbjct: 16156 ctccgcctccgcctccgccgccggcgac 16129


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,224,606
Number of Sequences: 3902068
Number of extensions: 6224606
Number of successful extensions: 104478
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103959
Number of HSP's gapped (non-prelim): 519
length of query: 634
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 611
effective length of database: 17,143,297,704
effective search space: 10474554897144
effective search space used: 10474554897144
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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