ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal29m08 |
|---|---|
| Clone Library Name | barley_pub |
>SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100| Length = 1038 Score = 303 bits (775), Expect = 4e-82 Identities = 140/205 (68%), Positives = 168/205 (81%) Frame = +3 Query: 39 PDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDA 218 P+GEEVP+++FGS G+IRCRRCRTY+NP+ TF D+GRKWRCN+C++LNDVPGEYF LDA Sbjct: 353 PEGEEVPLIDFGSTGIIRCRRCRTYVNPFVTFTDSGRKWRCNICSMLNDVPGEYFSHLDA 412 Query: 219 SGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIK 398 +GRR D DQRPEL+KG+VE +APTEYMVRPPMPP YFFLIDVS+SA +SG+LEVVA+TIK Sbjct: 413 TGRRMDMDQRPELTKGSVEIIAPTEYMVRPPMPPIYFFLIDVSISATKSGMLEVVAQTIK 472 Query: 399 SCLDDLLGFPRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXXXXXXXXXX 578 SCLD+L G+PRTQIGF+T+DSTLHF+N KSSLSQPQMM Sbjct: 473 SCLDNLPGYPRTQIGFITYDSTLHFYNMKSSLSQPQMMVVSDLDDIFVPLPDDLLVNLSE 532 Query: 579 SRHVIESFLDNLPNMFQDNVNVESA 653 SR V+++FLD+LP MFQDN NVESA Sbjct: 533 SRTVVDAFLDSLPLMFQDNFNVESA 557
>SC24B_ARATH (Q9M081) Putative protein transport protein Sec24-like At4g32640| Length = 1069 Score = 188 bits (478), Expect = 1e-47 Identities = 94/210 (44%), Positives = 122/210 (58%) Frame = +3 Query: 24 LSQXAPDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYF 203 L+ P E + VV+FG G +RC RC+ YINP+ F D GRK+ CN C ++ P +Y Sbjct: 407 LALSHPSEEPIQVVDFGEGGPVRCSRCKGYINPFMKFIDQGRKFICNFCGYTDETPRDYH 466 Query: 204 CGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVV 383 C L GRR D D+RPEL +GTVEFVA EYMVR PMP YFFLIDVS++A+++G Sbjct: 467 CNLGPDGRRRDVDERPELCRGTVEFVATKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAA 526 Query: 384 AKTIKSCLDDLLGFPRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXXXXX 563 I+ L DL PRT +G TFDST+HF+N K +L QP M+ Sbjct: 527 CNAIQQVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVV 586 Query: 564 XXXXXSRHVIESFLDNLPNMFQDNVNVESA 653 R +E LD++P MFQ++ ESA Sbjct: 587 VQLSECRQHLELLLDSIPTMFQESKIPESA 616
>SC24C_ARATH (Q9M291) Protein transport protein Sec24-like CEF| Length = 1097 Score = 187 bits (476), Expect = 2e-47 Identities = 91/205 (44%), Positives = 123/205 (60%) Frame = +3 Query: 39 PDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDA 218 P E + VV+FG +G +RC RC+ Y+NP+ F D GRK+ CNLC ++ P +Y C L Sbjct: 416 PSEEPIQVVDFGESGPVRCSRCKGYVNPFMKFIDQGRKFICNLCGYTDETPRDYQCNLGP 475 Query: 219 SGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIK 398 GRR D D+RPEL +GTV+FVA EYMVR PMP YFFLIDVS++A+++G I+ Sbjct: 476 DGRRRDADERPELCRGTVDFVATKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACSAIQ 535 Query: 399 SCLDDLLGFPRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXXXXXXXXXX 578 L DL PRT +G TFDST+HF+N K +L QP M+ Sbjct: 536 QVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVIVQLSE 595 Query: 579 SRHVIESFLDNLPNMFQDNVNVESA 653 R +E L+++P MFQ++ + ESA Sbjct: 596 CRQHLEILLESIPTMFQESKSPESA 620
>SC24A_HUMAN (O95486) Protein transport protein Sec24A (SEC24-related protein A)| (Fragment) Length = 1078 Score = 165 bits (417), Expect = 1e-40 Identities = 85/202 (42%), Positives = 122/202 (60%) Frame = +3 Query: 51 EVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDASGRR 230 ++PVV S+ ++RCR CRTYINP+ +F D R+W+CNLC +NDVP E+ + Sbjct: 404 QLPVVT--SSTIVRCRSCRTYINPFVSFLDQ-RRWKCNLCYRVNDVPEEFLYN-PLTRVY 459 Query: 231 FDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLD 410 + +RPE+ T+EF+AP+EYM+RPP PP Y F+ DVS +AV +G L V +++ LD Sbjct: 460 GEPHRRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLD 519 Query: 411 DLLGFPRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXXXXXXXXXXSRHV 590 L G RT+IGF+TFDST+HF+ + SLSQPQM+ S+ + Sbjct: 520 LLPGNTRTKIGFITFDSTIHFYGLQESLSQPQMLIVSDIEDVFIPMPENLLVNLNESKEL 579 Query: 591 IESFLDNLPNMFQDNVNVESAL 656 ++ L LP MF + +SAL Sbjct: 580 VQDLLKTLPQMFTKTLETQSAL 601
>SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-related protein A)| Length = 1090 Score = 163 bits (412), Expect = 5e-40 Identities = 83/202 (41%), Positives = 121/202 (59%) Frame = +3 Query: 51 EVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDASGRR 230 ++PVV S+ ++RCR CRTYINP+ F D R+W+CNLC +NDVP E+ + Sbjct: 416 QLPVVT--SSTIVRCRSCRTYINPFVNFLDQ-RRWKCNLCYRVNDVPEEFMYN-PLTRVY 471 Query: 231 FDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLD 410 + +RPE+ T+EF+AP+EYM+RPP PP Y F+ DVS +A+ +G L V +++ LD Sbjct: 472 GEPHKRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFDVSHNAIETGYLNSVCQSLLDNLD 531 Query: 411 DLLGFPRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXXXXXXXXXXSRHV 590 L G RT+IGF+TFDST+HF++ + LSQPQM+ S+ + Sbjct: 532 LLPGNTRTKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIDDVFIPMPENLLVNLNESKEL 591 Query: 591 IESFLDNLPNMFQDNVNVESAL 656 ++ L LP MF + +SAL Sbjct: 592 VQDLLKTLPQMFTKTLETQSAL 613
>SC24B_HUMAN (O95487) Protein transport protein Sec24B (SEC24-related protein B)| Length = 1268 Score = 163 bits (412), Expect = 5e-40 Identities = 84/205 (40%), Positives = 123/205 (60%) Frame = +3 Query: 42 DGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDAS 221 D ++PV+ S ++RCR CRTYINP+ +F D R+W+CNLC +NDVP E+ + Sbjct: 590 DLTQLPVIT--SNTIVRCRSCRTYINPFVSFIDQ-RRWKCNLCYRVNDVPEEFMYN-PLT 645 Query: 222 GRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKS 401 + +RPE+ TVEF+A ++YM+RPP P Y F++DVS +AV +G L ++ +++ Sbjct: 646 RSYGEPHKRPEVQNSTVEFIASSDYMLRPPQPAVYLFVLDVSHNAVEAGYLTILCQSLLE 705 Query: 402 CLDDLLGFPRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXXXXXXXXXXS 581 LD L G RT+IGF+TFDST+HF+N + LSQPQM+ S Sbjct: 706 NLDKLPGDSRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSDIDDVFLPTPDSLLVNLYES 765 Query: 582 RHVIESFLDNLPNMFQDNVNVESAL 656 + +I+ L+ LPNMF + SAL Sbjct: 766 KELIKDLLNALPNMFTNTRETHSAL 790
>SC24C_HUMAN (P53992) Protein transport protein Sec24C (SEC24-related protein C)| Length = 1094 Score = 160 bits (404), Expect = 4e-39 Identities = 85/219 (38%), Positives = 127/219 (57%), Gaps = 10/219 (4%) Frame = +3 Query: 24 LSQXAPDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYF 203 L++ P+ VV+ G +G +RC RC+ Y+ P+ F + GR+++C C+ +NDVP +YF Sbjct: 402 LARLPPEEASPYVVDHGESGPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYF 461 Query: 204 CGLDASGRRFDTDQRPELSKGTVEFVAPTEYMV--RPPMPPSYFFLIDVSVSAVRSGLLE 377 LD +G+R D RPELS G+ EF+A +Y + P PP++ F+IDVS +A+R+GL+ Sbjct: 462 QHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVR 521 Query: 378 VVAKTIKSCLDDLLGFPR--------TQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXX 533 ++ + +KS LD L PR ++GF+T++ LHF+N KSSL+QPQMM Sbjct: 522 LLCEELKSLLDFL---PREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVAD 578 Query: 534 XXXXXXXXXXXXXXXSRHVIESFLDNLPNMFQDNVNVES 650 SR VI S LD +P MF D E+ Sbjct: 579 MFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETET 617
>SC24D_HUMAN (O94855) Protein transport protein Sec24D (SEC24-related protein D)| Length = 1032 Score = 151 bits (382), Expect = 1e-36 Identities = 75/202 (37%), Positives = 120/202 (59%), Gaps = 10/202 (4%) Frame = +3 Query: 60 VVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDASGRRFDT 239 +VN G +G +RC RC+ Y+ P+ F + GR+++C C +NDVP YF LD GRR D Sbjct: 352 LVNHGESGPVRCNRCKAYMCPFMQFIEGGRRYQCGFCNCVNDVPPFYFQHLDHIGRRLDH 411 Query: 240 DQRPELSKGTVEFVAPTEY--MVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDD 413 ++PELS G+ E+VA +Y +PP PP++ F+IDVS S +++GL++++ + +K+ L+ Sbjct: 412 YEKPELSLGSYEYVATLDYCRKSKPPNPPAFIFMIDVSYSNIKNGLVKLICEELKTMLEK 471 Query: 414 LLGFPRTQ--------IGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXXXXXXX 569 + P+ + +GF+T++ LHF N KS+L+QPQMM Sbjct: 472 I---PKEEQEETSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVGEVFVPLLDGFLVN 528 Query: 570 XXXSRHVIESFLDNLPNMFQDN 635 S+ VI + LD +P+MF D+ Sbjct: 529 YQESQSVIHNLLDQIPDMFADS 550
>SEC24_YEAST (P40482) Protein transport protein Sec24 (Abnormal nuclear| morphology 1) Length = 926 Score = 122 bits (306), Expect = 9e-28 Identities = 73/204 (35%), Positives = 103/204 (50%), Gaps = 13/204 (6%) Frame = +3 Query: 84 VIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDASG-----RRFDTDQR 248 ++RCRRCR+Y+NP+ TF + GR+WRCN C L NDVP + +D S R+D R Sbjct: 228 IVRCRRCRSYMNPFVTFIEQGRRWRCNFCRLANDVPMQ----MDQSDPNDPKSRYD---R 280 Query: 249 PELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLLGF- 425 E+ +E++AP EY +R P P +Y FLIDVS S+++SGLL T+ LD + Sbjct: 281 NEIKCAVMEYMAPKEYTLRQPPPATYCFLIDVSQSSIKSGLLATTINTLLQNLDSIPNHD 340 Query: 426 PRTQIGFLTFDSTLHF-------HNFKSSLSQPQMMXXXXXXXXXXXXXXXXXXXXXXSR 584 RT+I L D+ +H+ N + S Q MM R Sbjct: 341 ERTRISILCVDNAIHYFKIPLDSENNEESADQINMMDIADLEEPFLPRPNSMVVSLKACR 400 Query: 585 HVIESFLDNLPNMFQDNVNVESAL 656 IE+ L +P +FQ N+ AL Sbjct: 401 QNIETLLTKIPQIFQSNLITNFAL 424
>YIY8_SCHPO (Q9UUI5) Hypothetical protein C22F8.08 in chromosome I| Length = 926 Score = 117 bits (293), Expect = 3e-26 Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 1/206 (0%) Frame = +3 Query: 42 DGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDAS 221 + + VPVV + RCRRCR YINP++ F D G ++RCN C ++N+VP Y + Sbjct: 241 EDDPVPVVT--DTIISRCRRCRMYINPFSIFIDNGHRYRCNSCGIVNEVPQSYDWDSFRN 298 Query: 222 GRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKS 401 +R D QRPEL+ V+F+AP EYMVR P P Y FLID+S ++ SG++ ++ I Sbjct: 299 VQR-DRWQRPELNYAVVDFIAPQEYMVRAPQPLVYVFLIDISFVSISSGMVGTASRAILE 357 Query: 402 CLDDLLGFP-RTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXXXXXXXXXX 578 LD + R ++ F+ DS LHF + + + Sbjct: 358 SLDRIPNKEGRAKVAFIGVDSALHFFSVSPGAEEATQLVVSDLEEPFLPRNQDLLLNLRE 417 Query: 579 SRHVIESFLDNLPNMFQDNVNVESAL 656 R IE+ L+ +MF + +AL Sbjct: 418 CRQGIENLLERFQSMFATTRDSSNAL 443
>YNB3_SCHPO (Q9USS7) Hypothetical protein C4.03c in chromosome II| Length = 891 Score = 117 bits (293), Expect = 3e-26 Identities = 69/205 (33%), Positives = 103/205 (50%), Gaps = 3/205 (1%) Frame = +3 Query: 27 SQXAPDGEEVPVVNFGSAGVIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFC 206 ++ PD VPVV+ ++ RC++CR YINP+ F A KW CNLC N + F Sbjct: 194 AELRPDEAPVPVVDNTNSNPPRCKKCRGYINPFIQFTMASSKWTCNLCGSENSFNDDGFN 253 Query: 207 GLDASGRRFDTDQRPELSKGTVEFVAPTEYMVR--PPMPPSYFFLIDVSVSAVRSGLLEV 380 L S + + RPEL+ GT++F +Y ++ PP P + F+IDVS A GL +V Sbjct: 254 PLVGS-QHDGVESRPELNVGTIDFKVGKDYWIKEDPPKPARFVFMIDVSYEASSKGLPKV 312 Query: 381 VAKTIKSCLDDLLGF-PRTQIGFLTFDSTLHFHNFKSSLSQPQMMXXXXXXXXXXXXXXX 557 A+ I++ L + P +I + FD +++F N +L QP M+ Sbjct: 313 AAEAIRNILYGPVPLDPNVKIAIVCFDRSVNFFNLSPNLEQPHMLAASDLENPFVPFSSG 372 Query: 558 XXXXXXXSRHVIESFLDNLPNMFQD 632 S+ VIE LD+ P +FQD Sbjct: 373 LFVDPIASKVVIERLLDSFPAIFQD 397
>SFB2_YEAST (P53953) SED5-binding protein 2 (SEC24-related protein 2)| Length = 876 Score = 112 bits (279), Expect = 1e-24 Identities = 55/131 (41%), Positives = 81/131 (61%), Gaps = 1/131 (0%) Frame = +3 Query: 84 VIRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDASGRRFDTDQRPELSK 263 ++RCRRCR+Y+NP+ F + GRKW+CN+C NDVP + L G + +R E+ Sbjct: 161 IVRCRRCRSYMNPFVVFINQGRKWQCNICRFKNDVPFGFDQNL--QGAPINRYERNEIKN 218 Query: 264 GTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLLGFP-RTQI 440 V+++AP EY VR P P Y FL+DVS +AV++GLL A+TI ++ L RT+I Sbjct: 219 SVVDYLAPVEYSVREPPPSVYVFLLDVSQNAVKNGLLATSARTILENIEFLPNHDGRTRI 278 Query: 441 GFLTFDSTLHF 473 + D +LH+ Sbjct: 279 AIICVDHSLHY 289
>SFB3_YEAST (P38810) SED5-binding protein 3 (SEC24-related protein 3) (Lethal| with SEC13 protein 1) Length = 929 Score = 98.2 bits (243), Expect = 2e-20 Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 5/165 (3%) Frame = +3 Query: 27 SQXAPDGEEVPVVNFGSAGV-IRCRRCRTYINPYATFADAGRKWRCNLCTLLNDVPGEYF 203 S P+ EVP + G +RCRRCR Y NP F CN+C + VPGE+F Sbjct: 197 STLTPNDAEVPTIPLPMDGTPLRCRRCRAYANPKFQFT-YDSSVICNICRVKMQVPGEHF 255 Query: 204 CGLDASGRRFDTDQRPELSKGTVEFVAPTEY---MVRPPMPPSYFFLIDVSVSAVRSGLL 374 + +G+R D +++ EL GTV+F+ P+ Y + +P Y FLIDVS+ A +G Sbjct: 256 APMGPNGQRSDLNEKSELLHGTVDFLVPSIYNAIQEKELLPLHYVFLIDVSLLANENGSS 315 Query: 375 EVVAKTIKSCLDDLLGF-PRTQIGFLTFDSTLHFHNFKSSLSQPQ 506 + + ++SC++ + F P ++ + +D+ L F N + L Q Sbjct: 316 LAMVEGVRSCIEYISDFQPNCEVAIIVYDNKLRFFNLRPDLDNAQ 360
>SEC23_YEAST (P15303) Protein transport protein SEC23| Length = 768 Score = 48.1 bits (113), Expect = 2e-05 Identities = 31/130 (23%), Positives = 52/130 (40%), Gaps = 1/130 (0%) Frame = +3 Query: 102 CRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDASGRRFDTDQRP-ELSKGTVEF 278 C++ +NPY W C +C N +P +Y + P EL T+E+ Sbjct: 61 CKSILNPYCVIDPRNSSWSCPICNSRNHLPPQY--------TNLSQENMPLELQSTTIEY 112 Query: 279 VAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLLGFPRTQIGFLTFD 458 + V PP +FF++D++ L+ T S L P IG +T+ Sbjct: 113 ITNKPVTV----PPIFFFVVDLTSETENLDSLKESIITSLSLLP-----PNALIGLITYG 163 Query: 459 STLHFHNFKS 488 + + H+ S Sbjct: 164 NVVQLHDLSS 173
>SC23A_MOUSE (Q01405) Protein transport protein Sec23A (SEC23-related protein A)| Length = 765 Score = 35.4 bits (80), Expect = 0.15 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 2/132 (1%) Frame = +3 Query: 87 IRCRR--CRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDASGRRFDTDQRPELS 260 + C R CR +NP + W CN C N P Y G+ + + P+ S Sbjct: 59 VLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTY-AGISELNQ--PAELLPQFS 115 Query: 261 KGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLLGFPRTQI 440 ++E+V + P MP + +++D + + L+ + ++++ L L P + Sbjct: 116 --SIEYVV----LRGPQMPLIFLYVVD---TCIEDEDLQALKESMQMSLSLLP--PTALV 164 Query: 441 GFLTFDSTLHFH 476 G +TF + H Sbjct: 165 GLITFGRMVQVH 176
>SC23A_HUMAN (Q15436) Protein transport protein Sec23A (SEC23-related protein A)| Length = 765 Score = 35.0 bits (79), Expect = 0.20 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 2/132 (1%) Frame = +3 Query: 87 IRCRR--CRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDASGRRFDTDQRPELS 260 + C R CR +NP + W CN C N P Y G+ + + P+ S Sbjct: 59 VLCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPSY-AGISELNQ--PAELLPQFS 115 Query: 261 KGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLLGFPRTQI 440 ++E+V + P MP + +++D + + L+ + ++++ L L P + Sbjct: 116 --SIEYVV----LRGPQMPLIFLYVVD---TCMEDEDLQALKESMQMSLSLLP--PTALV 164 Query: 441 GFLTFDSTLHFH 476 G +TF + H Sbjct: 165 GLITFGRMVQVH 176
>PNP_HAEIN (P44584) Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8)| (Polynucleotide phosphorylase) (PNPase) Length = 709 Score = 31.6 bits (70), Expect = 2.2 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = -2 Query: 629 LKHIGQVIEERLDNMSRIDQINQEIVRQWQENIVQVGNHHHLRLTQRRL 483 L HI Q+ EER++ +S Q+ QE+ +V++ +RLT + L Sbjct: 647 LVHISQIAEERVEKVSDYLQVGQEV----NVKVVEIDRQGRIRLTMKDL 691
>SYGB_PSESM (Q88B35) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 684 Score = 31.2 bits (69), Expect = 2.8 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +3 Query: 195 EYFCGLDASGR---RFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFF 332 +YFC LDA G+ RF T E SK + +A E +VRP + + FF Sbjct: 281 KYFCLLDADGKLLPRFITVANIE-SKDPAQIIAGNEKVVRPRLTDAEFF 328
>SC23B_MOUSE (Q9D662) Protein transport protein Sec23B (SEC23-related protein B)| Length = 767 Score = 30.4 bits (67), Expect = 4.9 Identities = 30/132 (22%), Positives = 52/132 (39%), Gaps = 2/132 (1%) Frame = +3 Query: 87 IRCRR--CRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDASGRRFDTDQRPELS 260 + C R C+ +NP + W CN C N P Y G+ + +Q EL Sbjct: 59 VLCSRPTCKAILNPLCQVDYRAKLWACNFCFQRNQFPPAY-AGIS------EVNQPAEL- 110 Query: 261 KGTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLLGFPRTQI 440 + + EYM++ FL V + + L+ + ++++ L L P + Sbjct: 111 ---MPQFSTIEYMIQRGARSPLIFLYVVD-TCLEEDDLQALKESLQMSLSLLP--PDALV 164 Query: 441 GFLTFDSTLHFH 476 G +TF + H Sbjct: 165 GLITFGRMVQVH 176
>Y45A_METJA (P81308) Hypothetical protein MJ0458.1| Length = 57 Score = 30.0 bits (66), Expect = 6.3 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +3 Query: 57 PVVNFGSAGVIRCRRCRTYINPY 125 P N G ++RC RCR NPY Sbjct: 25 PCPNCGEVEIVRCERCRKLNNPY 47
>SC23B_HUMAN (Q15437) Protein transport protein Sec23B (SEC23-related protein B)| Length = 767 Score = 30.0 bits (66), Expect = 6.3 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 4/134 (2%) Frame = +3 Query: 87 IRCRR--CRTYINPYATFADAGRKWRCNLCTLLNDVPGEYFCGLDASGRRFDTDQRPELS 260 + C R C+ +NP + W CN C N P Y G + +Q EL Sbjct: 59 VLCSRPTCKAVLNPLCQVDYRAKLWACNFCFQRNQFPPAY-------GGISEVNQPAELM 111 Query: 261 K--GTVEFVAPTEYMVRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLLGFPRT 434 T+E+V P + +++D + + L+ + ++++ L L P Sbjct: 112 PQFSTIEYVIQR----GAQSPLIFLYVVD---TCLEEDDLQALKESLQMSLSLLP--PDA 162 Query: 435 QIGFLTFDSTLHFH 476 +G +TF + H Sbjct: 163 LVGLITFGRMVQVH 176
>PROML_DROME (P82295) Prominin-like protein| Length = 1013 Score = 30.0 bits (66), Expect = 6.3 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +3 Query: 93 CRRCRTYINPYATFADAGRKWRCNLCTLL 179 CRRCR P + DA R++ C +C L+ Sbjct: 193 CRRCRQGCPPCTSKQDAQRRFCCGICLLI 221
>SYGB_PSEAE (Q9I7B8) Glycyl-tRNA synthetase beta chain (EC 6.1.1.14)| (Glycine--tRNA ligase beta chain) (GlyRS) Length = 684 Score = 30.0 bits (66), Expect = 6.3 Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Frame = +3 Query: 195 EYFCGLDASGR---RFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFF 332 +YFC LDA+G+ RF T E SK V+ E +VRP + + FF Sbjct: 281 KYFCLLDANGKLLPRFITVANVE-SKAPENIVSGNEKVVRPRLTDAEFF 328
>MA2B1_HUMAN (O00754) Lysosomal alpha-mannosidase precursor (EC 3.2.1.24)| (Mannosidase, alpha B) (Lysosomal acid alpha-mannosidase) (Laman) (Mannosidase alpha class 2B member 1) [Contains: Lysosomal alpha-mannosidase A peptide; Lysosomal alpha-mannosidase Length = 1010 Score = 30.0 bits (66), Expect = 6.3 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = +3 Query: 300 VRPPMPPSYFFLIDVSVSAVRSGLLEVVAKTIKSCLD-DLLGFPRTQIGFL-TFDSTLHF 473 +RPP+PP FFL+ ++ + R+G E + L+ LL +G+L T D +F Sbjct: 27 LRPPLPPLCFFLLLLAAAGARAGGYETCPTVQPNMLNVHLLPHTHDDVGWLKTVDQ--YF 84 Query: 474 HNFKSSL 494 + K+ + Sbjct: 85 YGIKNDI 91
>Y1672_HAEIN (P44288) Protein HI1672| Length = 881 Score = 30.0 bits (66), Expect = 6.3 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +3 Query: 198 YFCGLDASGRRFDTDQRPELSKGTVEFVAPTEYMVRPPMPPSYFFLIDVS 347 Y L G F+T +L KG + F P E ++P P+ FL+ ++ Sbjct: 817 YDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRFLLQIN 866
>PRGC1_PIG (Q865B6) Peroxisome proliferator-activated receptor gamma| coactivator 1-alpha (PPAR gamma coactivator 1-alpha) (PPARGC-1-alpha) (PGC-1-alpha) Length = 796 Score = 29.6 bits (65), Expect = 8.3 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = -3 Query: 466 NVLSKVKNPICVRGKPRRSSRHDLMVFATTSSSPLRTADTET 341 N S IC + KP+R +L+ + TT+ P T TET Sbjct: 185 NSWSNKAKSICQQQKPQRRPCSELLKYLTTNDDPPHTKPTET 226
>GUAA_THET8 (Q5SI28) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 503 Score = 29.6 bits (65), Expect = 8.3 Identities = 11/31 (35%), Positives = 21/31 (67%) Frame = -2 Query: 635 IVLKHIGQVIEERLDNMSRIDQINQEIVRQW 543 + ++ +G+V EERL+ + R D I ++R+W Sbjct: 386 LAVRVLGEVTEERLEILRRADDIFTSLLREW 416
>GUAA_THET2 (Q72IE5) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 503 Score = 29.6 bits (65), Expect = 8.3 Identities = 11/31 (35%), Positives = 21/31 (67%) Frame = -2 Query: 635 IVLKHIGQVIEERLDNMSRIDQINQEIVRQW 543 + ++ +G+V EERL+ + R D I ++R+W Sbjct: 386 LAVRVLGEVTEERLEILRRADDIFTSLLREW 416 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,667,158 Number of Sequences: 219361 Number of extensions: 2012210 Number of successful extensions: 5687 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 5402 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5646 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
