>CBPD_RAT (Q9JHW1) Carboxypeptidase D precursor (EC 3.4.17.22)|
           (Metallocarboxypeptidase D) (gp180)
          Length = 1378

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = -2

Query: 267 GRSLW-----QQVNPPPLPWQHPPAGVGLQAAAPLVP 172
           GR LW       + PPP P     A VGL AA PL+P
Sbjct: 96  GRPLWVLRLTAGLGPPPTP-----AAVGLDAAGPLLP 127

>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 20/52 (38%), Positives = 22/52 (42%)
 Frame = -2

Query: 258  LWQQVNPPPLPWQHPPAGVGLQAAAPLVPFXXXXXXXXXXXSVTPFVTCLSS 103
            L Q  N PP P  HPP   GL   AP  PF            +TP  TC S+
Sbjct: 1007 LTQSQNLPPPPASHPP--TGLHQVAPQPPFAQHPFVPGGPPPITP-PTCPST 1055

>MOSA_MAIZE (P15268) Autonomous transposable element EN-1 mosaic protein|
           (Suppressor-mutator system protein) (SPM)
          Length = 621

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 240 PPPLPWQHPPAGVGLQAAAPLVP 172
           PPP+PW  PP G   Q+ +P +P
Sbjct: 562 PPPMPWGFPPRG---QSQSPGLP 581

>YIPL_ORYSA (Q8S5M8) Protein yippee-like OJ1003C07.11|
          Length = 119

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -1

Query: 247 G*PSSIALAASTCRCRVASSSXVGSICFRGFFGA*FFLSYAI 122
           G P+S  L    CR   AS+  + S  FRG FG  +   + +
Sbjct: 16  GGPASAVLKCRRCRVDAASADAILSRDFRGRFGRAYLFDHVV 57


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,015,315
Number of Sequences: 219361
Number of extensions: 768209
Number of successful extensions: 2810
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2809
length of database: 80,573,946
effective HSP length: 64
effective length of database: 66,534,842
effective search space used: 1596836208
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)