ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal29j23 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 382 bits (982), Expect(2) = e-106 Identities = 188/189 (99%), Positives = 188/189 (99%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIADAPTNVQLPGMYNK ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 239 MVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 298 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN Sbjct: 299 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 358 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD Sbjct: 359 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 418 Query: 572 AMKTGSFYG 598 AMKTGSFYG Sbjct: 419 AMKTGSFYG 427 Score = 22.3 bits (46), Expect(2) = e-106 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = +1 Query: 646 GKGAQQGTL 672 GKGAQQGTL Sbjct: 427 GKGAQQGTL 435
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 352 bits (902), Expect = 8e-97 Identities = 166/189 (87%), Positives = 181/189 (95%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIADAPTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 236 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 295 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG G+EN Sbjct: 296 REDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVEN 355 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 I KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN D Sbjct: 356 ISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDD 415 Query: 572 AMKTGSFYG 598 AMKTG+FYG Sbjct: 416 AMKTGAFYG 424
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 348 bits (893), Expect = 8e-96 Identities = 164/189 (86%), Positives = 180/189 (95%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 239 MVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 298 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 RDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV TG+EN Sbjct: 299 RDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVEN 358 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 IGKRLVNSR+GP FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN D Sbjct: 359 IGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSD 418 Query: 572 AMKTGSFYG 598 AMKTGSFYG Sbjct: 419 AMKTGSFYG 427
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 337 bits (863), Expect = 3e-92 Identities = 158/189 (83%), Positives = 178/189 (94%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 249 MVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 308 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+ G+++ Sbjct: 309 REDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDS 368 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN D Sbjct: 369 IGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSD 428 Query: 572 AMKTGSFYG 598 AM TG+FYG Sbjct: 429 AMNTGTFYG 437
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 335 bits (858), Expect = 1e-91 Identities = 156/188 (82%), Positives = 178/188 (94%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 245 MVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 304 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV TG+EN Sbjct: 305 REDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVEN 364 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 I ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+D Sbjct: 365 IARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANED 424 Query: 572 AMKTGSFY 595 AMKTGSF+ Sbjct: 425 AMKTGSFF 432
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 333 bits (855), Expect = 2e-91 Identities = 157/189 (83%), Positives = 176/189 (93%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 249 MVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 308 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV G++ Sbjct: 309 REDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDT 368 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN D Sbjct: 369 IGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANND 428 Query: 572 AMKTGSFYG 598 A+K G+FYG Sbjct: 429 AIKRGTFYG 437
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 333 bits (854), Expect = 3e-91 Identities = 156/187 (83%), Positives = 176/187 (94%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 249 MVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 308 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV G++ Sbjct: 309 REDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDT 368 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQD Sbjct: 369 IGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQD 428 Query: 572 AMKTGSF 592 A+K G+F Sbjct: 429 AIKRGTF 435
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 331 bits (848), Expect = 1e-90 Identities = 159/187 (85%), Positives = 175/187 (93%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 253 MVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 312 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV TGIE Sbjct: 313 REDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEA 372 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN D Sbjct: 373 IGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANAD 432 Query: 572 AMKTGSF 592 A+ TG+F Sbjct: 433 AINTGNF 439
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 329 bits (844), Expect = 4e-90 Identities = 158/185 (85%), Positives = 175/185 (94%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 248 MVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 307 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV TGIE Sbjct: 308 REDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIEL 367 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN D Sbjct: 368 IGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANAD 427 Query: 572 AMKTG 586 A+ TG Sbjct: 428 AINTG 432
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 325 bits (833), Expect = 8e-89 Identities = 157/188 (83%), Positives = 170/188 (90%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 253 MVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 312 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIGVC GIF+TDNV E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV TGIE Sbjct: 313 REDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEK 372 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN D Sbjct: 373 IGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANAD 432 Query: 572 AMKTGSFY 595 A+ GSF+ Sbjct: 433 AINNGSFF 440
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 322 bits (824), Expect = 8e-88 Identities = 148/188 (78%), Positives = 175/188 (93%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNKEEN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 251 MVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 310 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 RDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+ G++ Sbjct: 311 RDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDA 370 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+D Sbjct: 371 TGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANED 430 Query: 572 AMKTGSFY 595 A+K+GSF+ Sbjct: 431 AIKSGSFF 438
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 321 bits (823), Expect = 1e-87 Identities = 154/189 (81%), Positives = 171/189 (90%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNKEEN RVPI+ TGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 249 MVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPT 308 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G+E Sbjct: 309 REDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEK 368 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 IGKRLVNSR+GP FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN D Sbjct: 369 IGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANAD 428 Query: 572 AMKTGSFYG 598 A+ G+FYG Sbjct: 429 AIGRGTFYG 437
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 320 bits (820), Expect = 2e-87 Identities = 151/189 (79%), Positives = 172/189 (91%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNK++N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 247 MVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 306 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIGVC GIF+TD V E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G++N Sbjct: 307 REDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDN 366 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 +GK+LVNS+DGP FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+D Sbjct: 367 VGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKD 426 Query: 572 AMKTGSFYG 598 A+ G+F+G Sbjct: 427 AIDRGTFFG 435
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 312 bits (799), Expect = 7e-85 Identities = 144/188 (76%), Positives = 173/188 (92%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNKE+N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPT Sbjct: 253 MVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPT 312 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIGVCKGIF+TD V ++ +V++VD PGQSIDFFGALRARVYDDEVRKW+ G+++ Sbjct: 313 REDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDS 372 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQD 571 +GK+LVNS++GP TF+QPKMT++KLL Y MLVQEQ+NVKRVQLAD Y+++AALG+AN+D Sbjct: 373 VGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANED 432 Query: 572 AMKTGSFY 595 A+K+GSF+ Sbjct: 433 AIKSGSFF 440
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 284 bits (726), Expect = 2e-76 Identities = 133/164 (81%), Positives = 149/164 (90%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRM+KFYWAPT Sbjct: 246 MVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPT 305 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIG+C GIF+TD V E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW G+E Sbjct: 306 REDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVER 365 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 523 IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L Sbjct: 366 IGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 246 bits (629), Expect = 3e-65 Identities = 122/174 (70%), Positives = 139/174 (79%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 MVNATLMNIAD PTNVQLPG+Y EE PRVPIV TGNDFSTLYAPLIRDGRMEK+YW PT Sbjct: 222 MVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPT 281 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 R+DRIGVC GIFQ DNV V +VDTFPGQSIDFFGALRARVYDD VR+W+ TG++ Sbjct: 282 REDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDK 341 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 553 IG++LVN+R V + M + L++YG LV EQ+NVKRVQLAD Y+S A L Sbjct: 342 IGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 205 bits (521), Expect = 1e-52 Identities = 95/168 (56%), Positives = 124/168 (73%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 +VNATLMNIAD PT+VQLPG Y+ RVPI+VTGNDFSTLYAPLIRDGRMEKFYW P Sbjct: 122 LVNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPH 181 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 RD+++G+ GIF D +S V K+VD+FP QSIDFF ALR+R+YD+++R ++ G EN Sbjct: 182 RDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYEN 241 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 535 + R+VNS +GP F++P T+ L+E + +V EQ ++ QL D Y Sbjct: 242 VSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 200 bits (508), Expect = 4e-51 Identities = 94/168 (55%), Positives = 122/168 (72%) Frame = +2 Query: 32 MVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPT 211 +VNATLMNIAD PT+VQLPG Y+ RVPI+VTGNDFSTLYAPLIRDGRMEKFYW P Sbjct: 122 LVNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPN 181 Query: 212 RDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIEN 391 RDD++G+ GIF D +S + ++VDTFP QSIDFF ALR+R+YD ++R ++ G E Sbjct: 182 RDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFER 241 Query: 392 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 535 I R+VNS + P F++P ++ L+E G++++ EQ V QL D Y Sbjct: 242 ISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289
>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast (RuBisCO activase) (RA) (Fragments) Length = 32 Score = 47.0 bits (110), Expect = 5e-05 Identities = 27/60 (45%), Positives = 30/60 (50%) Frame = +2 Query: 284 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 463 +VDTFPGQSIDFFGAL R+GP TFEQP MT+EK Sbjct: 1 LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32
>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)| (LeuRS) Length = 868 Score = 32.3 bits (72), Expect = 1.3 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%) Frame = -1 Query: 595 VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXLEGHGPVP 416 VEG+ HR L + + AHVG +LDI L DE V + G Sbjct: 671 VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728 Query: 415 RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE- 245 + + +A V + + V+ + Q+T + L EG++ + L +T + E Sbjct: 729 KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHEL 780 Query: 244 -DTLADTDTVVTGGSPVELLHTTITD 170 L + V+ G PV H + D Sbjct: 781 WTQLGHNEPVIDAGWPVFDAHALVQD 806
>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)| (EF-1AO) (42S p48) Length = 461 Score = 31.6 bits (70), Expect = 2.3 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%) Frame = +2 Query: 428 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 583 VTF +T E K +E H +QE NVK + + D A N M+ Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337 Query: 584 GSFYG*KILHTHPPSLAA 637 GSF I+ HP ++A Sbjct: 338 GSFTAQVIILNHPGQISA 355
>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)| Length = 462 Score = 30.4 bits (67), Expect = 5.1 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -1 Query: 367 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 242 P H I ++P+T E+++ L W G DD+++ L G D Sbjct: 5 PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44
>LEPA_HELPY (O25122) GTP-binding protein lepA| Length = 602 Score = 30.4 bits (67), Expect = 5.1 Identities = 20/79 (25%), Positives = 37/79 (46%) Frame = +2 Query: 281 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 460 KI+ T P S DF L+A +YD ++G+ LV DG + EQ + + Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232 Query: 461 KLLEYGHMLVQEQDNVKRV 517 ++G + + + +K++ Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251
>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)| Length = 464 Score = 30.0 bits (66), Expect = 6.6 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%) Frame = +2 Query: 428 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 583 VTF +T E K +E H +QE NVK + + D A N A +T Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337 Query: 584 GSFYG*KILHTHPPSLAA 637 F I+ HP ++A Sbjct: 338 KMFTAQVIIMNHPGQISA 355
>PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1, mitochondrial| precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35) Length = 783 Score = 30.0 bits (66), Expect = 6.6 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%) Frame = -1 Query: 280 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 146 D RL+TDI+G+ED D D + G G P++++ I Q SV ++E Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGVPIKIIMEAI-QQASVAKKE 584 Query: 145 IV 140 I+ Sbjct: 585 IL 586
>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor| Length = 1346 Score = 30.0 bits (66), Expect = 6.6 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -2 Query: 531 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 427 + +SC+R TL T CP SS +TVI+ C ++ Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453
>PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1, mitochondrial| precursor (EC 2.7.7.8) (PNPase 1) Length = 783 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%) Frame = -1 Query: 280 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 146 D RL+TDI+G+ED D D + G G P++++ I Q SV ++E Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584 Query: 145 IV 140 I+ Sbjct: 585 IL 586
>PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1, mitochondrial| precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide phosphorylase-like protein) (PNPase old-35) (3'-5' RNA exonuclease OLD35) Length = 783 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%) Frame = -1 Query: 280 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 146 D RL+TDI+G+ED D D + G G P++++ I Q SV ++E Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584 Query: 145 IV 140 I+ Sbjct: 585 IL 586
>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor| Length = 521 Score = 29.6 bits (65), Expect = 8.7 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Frame = +2 Query: 365 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 472 W+GS I+ G+RL++SRD +T E P++ ++ LLE Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,197,349 Number of Sequences: 219361 Number of extensions: 1995975 Number of successful extensions: 6720 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 6409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6713 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
