Clone Name	baal29j23
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	1261	0.0
2	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	1126	0.0
3	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	1100	0.0
4	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	950	0.0
5	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	874	0.0
6	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	739	0.0
7	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	664	0.0
8	emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat...	521	e-145
9	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	355	1e-94
10	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	347	3e-92
11	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	347	3e-92
12	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	347	3e-92
13	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	347	3e-92
14	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	347	3e-92
15	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	347	3e-92
16	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	347	3e-92
17	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	347	3e-92
18	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	337	3e-89
19	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	335	1e-88
20	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	331	2e-87
21	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	305	1e-79
22	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	305	1e-79
23	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	305	1e-79
24	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	305	1e-79
25	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	295	1e-76
26	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	295	1e-76
27	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	287	2e-74
28	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	287	2e-74
29	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	260	5e-66
30	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	252	1e-63
31	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	232	1e-57
32	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	232	1e-57
33	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	228	2e-56
34	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	226	7e-56
35	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	226	7e-56
36	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	226	7e-56
37	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	226	7e-56
38	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	226	7e-56
39	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	226	7e-56
40	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	226	7e-56
41	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	226	7e-56
42	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	218	2e-53
43	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	218	2e-53
44	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	218	2e-53
45	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	218	2e-53
46	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	218	2e-53
47	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	218	2e-53
48	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	218	2e-53
49	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	216	7e-53
50	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	216	7e-53
51	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	216	7e-53
52	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	216	7e-53
53	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	216	7e-53
54	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	216	7e-53
55	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	216	7e-53
56	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	216	7e-53
57	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	216	7e-53
58	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	216	7e-53
59	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	212	1e-51
60	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	208	2e-50
61	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	208	2e-50
62	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	204	3e-49
63	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	196	7e-47
64	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	194	3e-46
65	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	190	4e-45
66	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	178	2e-41
67	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	176	6e-41
68	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	168	1e-38
69	gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi...	167	6e-38
70	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	165	2e-37
71	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	165	2e-37
72	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	149	1e-32
73	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	145	2e-31
74	emb|Y10657.1|CLRCAGENE C.littorale rca gene	143	9e-31
75	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	139	1e-29
76	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	137	5e-29
77	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	137	5e-29
78	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	135	2e-28
79	gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence	133	8e-28
80	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	129	1e-26
81	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	127	5e-26
82	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	125	2e-25
83	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	94	7e-16
84	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	94	7e-16
85	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	84	7e-13
86	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	82	3e-12
87	emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase	80	1e-11
88	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	78	4e-11
89	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	76	2e-10
90	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	72	3e-09
91	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	60	1e-05
92	ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G7...	56	2e-04
93	gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	2e-04
94	gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	2e-04
95	emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Co...	56	2e-04
96	dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown ...	56	2e-04
97	gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N...	56	2e-04
98	emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Co...	54	6e-04
99	gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se...	48	0.038
100	gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se...	48	0.038
101	gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl...	44	0.59
102	emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom...	42	2.3
103	emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Co...	42	2.3
104	gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complet...	42	2.3
105	gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic s...	42	2.3
106	gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complet...	40	9.2
107	gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Synten...	40	9.2
108	gb|U60105.1| Bos taurus large conductance calcium-activated pota...	40	9.2
109	gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trx...	40	9.2
110	gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, ...	40	9.2
111	ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001...	40	9.2
112	emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding prot...	40	9.2
113	gb|AF026000.2| Sus scrofa calcium-activated potassium channel al...	40	9.2
114	gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co...	40	9.2
115	ref|NM_174680.2| Bos taurus potassium large conductance calcium-...	40	9.2
116	gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Synten...	40	9.2
117	gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN...	40	9.2
118	gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN...	40	9.2
119	gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN...	40	9.2
120	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	40	9.2
121	ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like f...	40	9.2
122	ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like f...	40	9.2
123	gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com...	40	9.2
124	gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence	40	9.2
125	ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ...	40	9.2
126	ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smoot...	40	9.2
127	gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, ...	40	9.2
128	gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein p...	40	9.2

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score = 1261 bits (636), Expect = 0.0
 Identities = 669/676 (98%), Gaps = 3/676 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggcggaacc-cgcagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatc 58
            ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 823  ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 882

                                                                        
Query: 59   gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 118
            |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 883  gccgatgcccccaccaacgtgcagctccctggcatgtacaacaagagggagaacccccgt 942

                                                                        
Query: 119  gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943  gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 1002

                                                                        
Query: 179  ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 1062

                                                                        
Query: 239  ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 298
            |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 1063 ggtatcttccagaccgacaatgtctgtgacgagtctgtcgtaaagatcgtcgacaccttc 1122

                                                                        
Query: 299  ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 358
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 1182

                                                                        
Query: 359  cgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgg 418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 cgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgg 1242

                                                                        
Query: 419  gacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacggg 478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1243 gacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacggg 1302

                                                                        
Query: 479  cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatg 538
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatg 1362

                                                                        
Query: 539  agccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1363 agccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 1422

                                                                        
Query: 599  tagaaaattctccatac-acacccaccatctcttgctgcataggaggaggtaaaggagca 657
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 tagaaaattctccatacaacacccaccatctcttgctgcataggaggaggtaaaggagca 1482

                            
Query: 658  cagcaaggtactttgc 673
            ||||||||||||||||
Sbjct: 1483 cagcaaggtactttgc 1498

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 1126 bits (568), Expect = 0.0
 Identities = 594/600 (99%), Gaps = 2/600 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggcggaacc-cgcagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatc 58
            ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 568  ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 627

                                                                        
Query: 59   gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 118
            |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 628  gccgatgcccccaccaacgtgcagctccctggcatgtacaacaagagggagaacccccgt 687

                                                                        
Query: 119  gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688  gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 747

                                                                        
Query: 179  ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748  ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 807

                                                                        
Query: 239  ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 298
            |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 808  ggtatcttccagaccgacaatgtctgtgacgagtctgtcgtaaagatcgtcgacaccttc 867

                                                                        
Query: 299  ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 358
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868  ccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 927

                                                                        
Query: 359  cgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgg 418
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928  cgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgg 987

                                                                        
Query: 419  gacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacggg 478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988  gacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacggg 1047

                                                                        
Query: 479  cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatg 538
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 cacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatg 1107

                                                                        
Query: 539  agccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108 agccaggcagctctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 1167



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                        
Query: 646  ggtaaaggagcacagcaaggtactttgc 673
            ||||||||||||||||||||||||||||
Sbjct: 1165 ggtaaaggagcacagcaaggtactttgc 1192

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score = 1100 bits (555), Expect = 0.0
 Identities = 637/663 (96%), Gaps = 1/663 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 755  cagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgatgccccc 814

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 815  accaatgtgcagctcccaggcatgtacaacaaggaggagaacccacgtgtgcccatcgtc 874

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            ||||| |||||||||||||||||| | ||||| |||||||||||||||||||||||||||
Sbjct: 875  gtcactggtaacgatttctcgacgttgtacgcccctctgatccgtgatggtcgtatggag 934

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 935  aagttctactgggctcccacccgcgacgaccgtatcggtgtctgcaagggtatcttccag 994

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 995  accgacaatgtcagcgacgagtccgtcgtcaagatcgtcgacaccttcccaggacaatcc 1054

                                                                        
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 370
            || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1055 atcgactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtg 1114

                                                                        
Query: 371  ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 430
              ||||||||| ||||||||||||||||||| ||||||||||||||||||||| || |||
Sbjct: 1115 acctctaccggtatcgagaacattggcaagaagctggtgaactcgcgggacggaccagtg 1174

                                                                        
Query: 431  accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 490
            ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1175 acctttgagcagccaaagatgacagtggagaagctgctagagtacgggcacatgctcgtc 1234

                                                                        
Query: 491  caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1235 caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 1294

                                                                        
Query: 551  ctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctc 610
            |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 1295 ctgggtgatgctaaccaggatgcgatgaagactggtaccttctacggttagaacattctc 1354

                                                                        
Query: 611  catacacacccaccatctcttgctgcataggaggaggtaaaggagcacagcaaggtactt 670
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1355 catacacacccaccatctcttgctgcataggaggaggtaaaggggcacagcaaggtactt 1414

               
Query: 671  tgc 673
            |||
Sbjct: 1415 tgc 1417

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  950 bits (479), Expect = 0.0
 Identities = 545/567 (96%)
 Strand = Plus / Plus

                                                                       
Query: 107 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 166
           |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 1   gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60

                                                                       
Query: 167 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 226
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatc 120

                                                                       
Query: 227 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 286
           |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 121 ggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatc 180

                                                                       
Query: 287 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 346
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgacaccttcccaggacaatccatcgactttttcggtgctctgcgtgctcgggtgtac 240

                                                                       
Query: 347 gacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctg 406
           ||||| |||||||||||||||||   ||||||||| ||||||||||||||||||| ||||
Sbjct: 241 gacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagctg 300

                                                                       
Query: 407 gtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctg 466
           ||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 301 gtgaactcgcgggacggaccagtgacctttgagcagccaaagatgacagtggagaagctg 360

                                                                       
Query: 467 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 526
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 420

                                                                       
Query: 527 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggt 586
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagactggt 480

                                                                       
Query: 587 tccttctacggttagaaaattctccatacacacccaccatctcttgctgcataggaggag 646
            |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accttctacggttagaacattctccatacacacccaccatctcttgctgcataggaggag 540

                                      
Query: 647 gtaaaggagcacagcaaggtactttgc 673
           ||||||| |||||||||||||||||||
Sbjct: 541 gtaaaggggcacagcaaggtactttgc 567

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  874 bits (441), Expect = 0.0
 Identities = 609/663 (91%), Gaps = 3/663 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||
Sbjct: 766  cagtacaccgtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacgcgccc 825

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            ||||||||||||||||| || ||||||||||||||||||||||||||||| |||||| ||
Sbjct: 826  accaacgtgcagctcccggggatgtacaacaaggaggagaacccccgtgtccccatcatc 885

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            |||||||| ||||| ||||||||||| ||||| || || |||||||| ||||||||||||
Sbjct: 886  gtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgtgacggtcgtatggag 945

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            |||||||||||||| |||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 946  aagttctactgggcgcccacccgcgaggaccgtatcggcgtctgcaagggtatcttccag 1005

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 1006 accgacaacgtcagcgacgagtctgtcgtcaagatcgtcgacacnttcccaggacagtcc 1065

                                                                        
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 370
            || ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| 
Sbjct: 1066 atcgacttcttcggtgctctgcgtgctcgggtgtacgacgttgaggtgcgcaagtgggtg 1125

                                                                        
Query: 371  ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 430
               || |||||||| |||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 1126 tcgtccaccggaattgagaacatcggcaagaggctggtgaactcgcgggacggacccgtc 1185

                                                                        
Query: 431  accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 490
            |||||||||||||| |||||||| || |||||| |||| |||||||| |||||||| |||
Sbjct: 1186 accttcgagcagcccaagatgacggtggagaagttgctggagtacggccacatgcttgtc 1245

                                                                        
Query: 491  caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 550
            ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1246 caggagcaggacaatgtcaagcgtgtgcagcttgcggacacttacatgagccaggcagct 1305

                                                                        
Query: 551  ctgggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctc 610
            ||||||||||| ||| ||||||| ||||||||||||||||||||||||||||| | ||| 
Sbjct: 1306 ctgggtgatgcgaacaaggatgccatgaagactggttccttctacggttagaacactctt 1365

                                                                        
Query: 611  catacacacccaccatctcttgctgcataggaggaggtaaaggagcacagcaaggtactt 670
            |||  |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 1366 cat--acacccaccatctcttgctgcataggaggaggtaaaggagcacaacaaggcactt 1423

               
Query: 671  tgc 673
            |||
Sbjct: 1424 tgc 1426

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  739 bits (373), Expect = 0.0
 Identities = 535/588 (90%), Gaps = 1/588 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            ||||||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||
Sbjct: 776  cagtacaccgtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacgcgccc 835

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||||||||| || || ||||||||||||||||||||||||||||| |||||  | 
Sbjct: 836  accaacgtgcagcttccggggatgtacaacaaggaggagaacccccgtgttcccattatn 895

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            |||||||| ||||| || |||||||| ||||| || || || | ||| ||||||||||||
Sbjct: 896  gtcaccggcaacgacttttcgacgctgtacgccccccttattcctgacggtcgtatggag 955

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            ||||| |||||||| |||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 956  aagttttactgggcgcccacccgcgaggaccgtatcggcgtctgcaagggtatcttccag 1015

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1016 accgacaacgtcagcgacgagtctgtcgtcaagatcgtcgacaccttcccaggacagtcc 1075

                                                                        
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtc 370
            || ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| 
Sbjct: 1076 atcgacttcttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtg 1135

                                                                        
Query: 371  ggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtg 430
               || |||||||| |||||||| ||||||||||||||||||||||||||||| ||||| 
Sbjct: 1136 tcgtccaccggaattgagaacatcggcaagaggctggtgaactcgcgggacggacccgtc 1195

                                                                        
Query: 431  accttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtc 490
            |||||||||||||| |||||||| || |||||| |||| |||||||| |||||||| |||
Sbjct: 1196 accttcgagcagcccaagatgacggtggagaagttgctggagtacggccacatgcttgtc 1255

                                                                        
Query: 491  caggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagct 550
            ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1256 caggagcaggacaatgtcaagcgtgtgcagcttgcggacacttacatgagccaggcagct 1315

                                                            
Query: 551  ctgggtgatgctaaccaggatgcgatgaagactggttccttctacggt 598
            ||||||||||| ||| ||||||| ||||||||||||||||||||||||
Sbjct: 1316 ctgggtgatgcgaacaaggatgccatgaagactggttccttctacggt 1363



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 646  ggtaaaggagcacagcaaggtactttgc 673
            |||||||||||||| ||||| |||||||
Sbjct: 1361 ggtaaaggagcacaacaaggcactttgc 1388

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  664 bits (335), Expect = 0.0
 Identities = 335/335 (100%)
 Strand = Plus / Plus

                                                                        
Query: 314  gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 373
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080

                                                                        
Query: 374  tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7081 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 7140

                                                                        
Query: 434  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7141 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 7200

                                                                        
Query: 494  gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7201 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 7260

                                                                        
Query: 554  ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 613
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7261 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 7320

                                               
Query: 614  acacacccaccatctcttgctgcataggaggaggt 648
            |||||||||||||||||||||||||||||||||||
Sbjct: 7321 acacacccaccatctcttgctgcataggaggaggt 7355



 Score =  579 bits (292), Expect = e-162
 Identities = 312/316 (98%), Gaps = 2/316 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggcggaacc-cgcagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatc 58
            ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 6565 ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 6624

                                                                        
Query: 59   gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 118
            |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 6625 gccgatgcccccaccaacgtgcagctccctggcatgtacaacaagagggagaacccccgt 6684

                                                                        
Query: 119  gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6685 gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 6744

                                                                        
Query: 179  ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6745 ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 6804

                                                                        
Query: 239  ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 298
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6805 ggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttc 6864

                            
Query: 299  ccaggacaatccattg 314
            ||||||||||||||||
Sbjct: 6865 ccaggacaatccattg 6880



 Score =  335 bits (169), Expect = 1e-88
 Identities = 317/365 (86%), Gaps = 1/365 (0%)
 Strand = Plus / Plus

                                                                        
Query: 10   cgcagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccc 68
            |||||||||| || ||||||| |||||||||||||||||||||||||||||| || || |
Sbjct: 3448 cgcagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgcggacgcgc 3507

                                                                        
Query: 69   ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 128
            ||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| 
Sbjct: 3508 ccaccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatca 3567

                                                                        
Query: 129  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 188
            |||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || ||||
Sbjct: 3568 tcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatgg 3627

                                                                        
Query: 189  agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
            |||||||||||||||| |||||||| || ||||| ||||| || |||||||| |||||||
Sbjct: 3628 agaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaagggcatcttcc 3687

                                                                        
Query: 249  agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 308
              |||||||| |||   |||||| | || || | | | || ||||||||||| || || |
Sbjct: 3688 gcaccgacaacgtcccggacgaggccgtggtgaggctggtggacaccttcccggggcagt 3747

                                                                        
Query: 309  ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 368
            |||| ||||| ||||| || ||||| || |||||||||||||| ||||||||||||||||
Sbjct: 3748 ccatcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtggg 3807

                 
Query: 369  tcggc 373
            |||||
Sbjct: 3808 tcggc 3812



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                        
Query: 434  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 493
            ||||| ||||| ||||||||  | ||||||||  | |||||||| |||||||| ||||||
Sbjct: 3873 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 3932

                                         
Query: 494  gagcaggacaatgtcaagcgtgtgcagct 522
            |||||||| || |||||||||||||||||
Sbjct: 3933 gagcaggagaacgtcaagcgtgtgcagct 3961



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 30/30 (100%)
 Strand = Plus / Plus

                                          
Query: 644  gaggtaaaggagcacagcaaggtactttgc 673
            ||||||||||||||||||||||||||||||
Sbjct: 7523 gaggtaaaggagcacagcaaggtactttgc 7552

---

>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  521 bits (263), Expect = e-145
 Identities = 296/307 (96%)
 Strand = Plus / Plus

                                                                       
Query: 314 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 373
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |
Sbjct: 2   gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacc 61

                                                                       
Query: 374 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 433
           |||||||| ||||||||||||||||||| ||| ||||||||||||||||| || ||||||
Sbjct: 62  tctaccggtatcgagaacattggcaagaagcttgtgaactcgcgggacggaccagtgacc 121

                                                                       
Query: 434 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 493
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tttgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 181

                                                                       
Query: 494 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 553
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 241

                                                                       
Query: 554 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaaaattctccat 613
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 242 ggtgatgctaaccaggatgcgatgaagactggttccttctacggttagaacattctccat 301

                  
Query: 614 acacacc 620
           |||||||
Sbjct: 302 acacacc 308

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  355 bits (179), Expect = 1e-94
 Identities = 315/359 (87%), Gaps = 1/359 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 759  cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 818

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 819  accaacgtgcagctccctgggatgtacaacaaggaggacaacccccgtgtccccatcatc 878

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 879  gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 938

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 939  aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 998

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 999  accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1058

                                                                       
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
            || || || ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1059 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1117



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 386  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1134 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1193

                                                                        
Query: 446  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1194 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1253

                                                                        
Query: 506  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1254 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1313

                                              
Query: 566  caggatgcgatgaagactggttccttctacggtt 599
               || || |||||||||||||||||||||||||
Sbjct: 1314 tccgacgccatgaagactggttccttctacggtt 1347

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  347 bits (175), Expect = 3e-92
 Identities = 314/359 (87%), Gaps = 1/359 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 728  cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 787

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 788  accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 847

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 848  gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 907

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 908  aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 967

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 968  accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1027

                                                                       
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
            || || || ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1028 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1086



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 386  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1103 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1162

                                                                        
Query: 446  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1163 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 1222

                                                                        
Query: 506  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1223 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1282

                                              
Query: 566  caggatgcgatgaagactggttccttctacggtt 599
               || || |||||||||||||||||||||||||
Sbjct: 1283 tccgacgccatgaagactggttccttctacggtt 1316

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  347 bits (175), Expect = 3e-92
 Identities = 314/359 (87%), Gaps = 1/359 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 723  cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 782

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 783  accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 842

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 843  gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 902

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 903  aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 962

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 963  accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1022

                                                                       
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
            || || || ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1023 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1081



 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Plus

                                                                        
Query: 386  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1098 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1157

                                                                        
Query: 446  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1158 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1217

                                                                        
Query: 506  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1218 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1277

                                            
Query: 566  caggatgcgatgaagactggttccttctacgg 597
               || || |||||||||||||||||||||||
Sbjct: 1278 tccgacgccatgaagactggttccttctacgg 1309

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  347 bits (175), Expect = 3e-92
 Identities = 314/359 (87%), Gaps = 1/359 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 771  cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 830

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 831  accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 890

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 891  gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 950

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 951  aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 1010

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 1011 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1070

                                                                       
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
            || || || ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1071 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1129



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 386  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1146 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1205

                                                                        
Query: 446  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1206 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1265

                                                                        
Query: 506  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1266 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1325

                                              
Query: 566  caggatgcgatgaagactggttccttctacggtt 599
               || || |||||||||||||||||||||||||
Sbjct: 1326 tccgacgccatgaagactggttccttctacggtt 1359

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  347 bits (175), Expect = 3e-92
 Identities = 314/359 (87%), Gaps = 1/359 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 722  cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 781

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 782  accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 841

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 842  gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 901

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 902  aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 961

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 962  accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1021

                                                                       
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
            || || || ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1022 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1080



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 386  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1097 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1156

                                                                        
Query: 446  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1157 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1216

                                                                        
Query: 506  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1217 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1276

                                              
Query: 566  caggatgcgatgaagactggttccttctacggtt 599
               || || |||||||||||||||||||||||||
Sbjct: 1277 tccgacgccatgaagactggttccttctacggtt 1310

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  347 bits (175), Expect = 3e-92
 Identities = 314/359 (87%), Gaps = 1/359 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 760  cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 819

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 820  accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 879

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 880  gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 939

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 940  aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 999

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 1000 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1059

                                                                       
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
            || || || ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1060 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1118



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 386  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1135 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1194

                                                                        
Query: 446  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1195 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1254

                                                                        
Query: 506  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1255 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1314

                                              
Query: 566  caggatgcgatgaagactggttccttctacggtt 599
               || || |||||||||||||||||||||||||
Sbjct: 1315 tccgacgccatgaagactggttccttctacggtt 1348

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  347 bits (175), Expect = 3e-92
 Identities = 314/359 (87%), Gaps = 1/359 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 543 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 602

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 603 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 662

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 663 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 722

                                                                       
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
           ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 723 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 782

                                                                       
Query: 251 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
           |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 783 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 842

                                                                      
Query: 311 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
           || || || ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 843 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 901



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 386  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 918  gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 977

                                                                        
Query: 446  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 978  aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1037

                                                                        
Query: 506  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1038 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1097

                                              
Query: 566  caggatgcgatgaagactggttccttctacggtt 599
               || || |||||||||||||||||||||||||
Sbjct: 1098 tccgacgccatgaagactggttccttctacggtt 1131

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  347 bits (175), Expect = 3e-92
 Identities = 314/359 (87%), Gaps = 1/359 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 764  cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 823

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 824  accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 883

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 884  gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 943

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 944  aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 1003

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 1004 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1063

                                                                       
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
            || || || ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1064 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1122



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                        
Query: 386  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1139 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1198

                                                                        
Query: 446  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1199 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1258

                                                                        
Query: 506  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1259 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1318

                                              
Query: 566  caggatgcgatgaagactggttccttctacggtt 599
               || || |||||||||||||||||||||||||
Sbjct: 1319 tccgacgccatgaagactggttccttctacggtt 1352

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  347 bits (175), Expect = 3e-92
 Identities = 314/359 (87%), Gaps = 1/359 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 758  cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 817

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 818  accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 877

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 878  gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 937

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 938  aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 997

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 998  accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 1057

                                                                       
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
            || || || ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1058 atcgatttcttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1116



 Score =  119 bits (60), Expect = 1e-23
 Identities = 174/212 (82%)
 Strand = Plus / Plus

                                                                        
Query: 386  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1133 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1192

                                                                        
Query: 446  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1193 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1252

                                                                        
Query: 506  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1253 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1312

                                            
Query: 566  caggatgcgatgaagactggttccttctacgg 597
               || || |||||||||||||||||||||||
Sbjct: 1313 tccgacgccatgaagactggttccttctacgg 1344

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  337 bits (170), Expect = 3e-89
 Identities = 429/514 (83%), Gaps = 1/514 (0%)
 Strand = Plus / Plus

                                                                        
Query: 10   cgcagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccc 68
            |||||||||| || ||||||| |||||||||||||||||||||||||||||| || || |
Sbjct: 729  cgcagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgcggacgcgc 788

                                                                        
Query: 69   ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 128
            |||||||||||||| |||| || ||||||||||||||||||||||| || ||||||||| 
Sbjct: 789  ccaccaacgtgcagttcccggggatgtacaacaaggaggagaacccacgcgtgcccatca 848

                                                                        
Query: 129  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 188
            |||||||||| ||||| ||||||||||| ||||| || || ||||| || || || ||||
Sbjct: 849  tcgtcaccggcaacgacttctcgacgctgtacgcgcccctcatccgggacggccgcatgg 908

                                                                        
Query: 189  agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
            |||||||||||||||| |||||||| || ||||| ||||| || |||||||| |||||||
Sbjct: 909  agaagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaagggcatcttcc 968

                                                                        
Query: 249  agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 308
              |||||||| |||   |||||| | || || | | | || ||||||||||| || || |
Sbjct: 969  gcaccgacaacgtccccgacgaggccgtggtgaggctggtggacaccttcccggggcagt 1028

                                                                        
Query: 309  ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 368
            |||| ||||| ||||| || ||||| || |||||||||||||| ||||||||||||||||
Sbjct: 1029 ccatcgacttcttcggcgcgctgcgggcgcgggtgtacgacgacgaggtgcgcaagtggg 1088

                                                                        
Query: 369  tcggctctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccg 428
            |||||   | |||  ||||||||||   |||| |||| || |||||  |||| |||||  
Sbjct: 1089 tcggcgagatcggcgtcgagaacatctccaagcggctcgtcaactccagggaggggccgc 1148

                                                                        
Query: 429  tgaccttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcg 488
             ||| ||||| ||||| ||||||||  ||||||||||  | |||||||| |||||||| |
Sbjct: 1149 cgacgttcgaccagcccaagatgaccatcgagaagctcatggagtacggccacatgctgg 1208

                                              
Query: 489  tccaggagcaggacaatgtcaagcgtgtgcagct 522
            ||||||||||||| || || ||||| ||||||||
Sbjct: 1209 tccaggagcaggagaacgtgaagcgcgtgcagct 1242

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  335 bits (169), Expect = 1e-88
 Identities = 317/365 (86%), Gaps = 1/365 (0%)
 Strand = Plus / Plus

                                                                        
Query: 10   cgcagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccc 68
            |||||||||| || ||||||| |||||||||||||||||||||||||||||| || || |
Sbjct: 879  cgcagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgcggacgcgc 938

                                                                        
Query: 69   ccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcg 128
            ||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| 
Sbjct: 939  ccaccaacgtgcagctcccggggatgtacaacaaggaggagaacccccgcgtgcccatca 998

                                                                        
Query: 129  tcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatgg 188
            |||||||||| ||||| ||||||||||| |||||||| ||||||||||| || || ||||
Sbjct: 999  tcgtcaccggcaacgacttctcgacgctgtacgctcccctgatccgtgacgggcgcatgg 1058

                                                                        
Query: 189  agaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
            |||||||||||||||| |||||||| || ||||| ||||| || |||||||| |||||||
Sbjct: 1059 agaagttctactgggcgcccacccgcgaggaccgcatcggcgtgtgcaagggcatcttcc 1118

                                                                        
Query: 249  agaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaat 308
              |||||||| |||   |||||| | || || | | | || ||||||||||| || || |
Sbjct: 1119 gcaccgacaacgtcccggacgaggccgtggtgaggctggtggacaccttcccggggcagt 1178

                                                                        
Query: 309  ccattgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtggg 368
            |||| ||||| ||||| || ||||| || |||||||||||||| ||||||||||||||||
Sbjct: 1179 ccatcgacttcttcggcgcgctgcgggcacgggtgtacgacgacgaggtgcgcaagtggg 1238

                 
Query: 369  tcggc 373
            |||||
Sbjct: 1239 tcggc 1243



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                        
Query: 434  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 493
            ||||| ||||| ||||||||  | ||||||||  | |||||||| |||||||| ||||||
Sbjct: 1304 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 1363

                                         
Query: 494  gagcaggacaatgtcaagcgtgtgcagct 522
            |||||||| || |||||||||||||||||
Sbjct: 1364 gagcaggagaacgtcaagcgtgtgcagct 1392

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                       
Query: 35  gtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatg 94
           |||||||||||||||||||||||||||||   ||| ||||||||||||||||| || |||
Sbjct: 1   gtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatg 60

                                                                       
Query: 95  tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 154
           |||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| |||
Sbjct: 61  tacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacg 120

                                                                       
Query: 155 ctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgt 214
           || ||||| || || |||||||| || |||||||||||||||||||||||||||||||| 
Sbjct: 121 ctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgc 180

                                                                       
Query: 215 gacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtct 274
           ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||   
Sbjct: 181 gacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggac 240

                                                                       
Query: 275 gtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgt 334
            |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| |||
Sbjct: 241 atcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgt 300

                                              
Query: 335 gctcgggtgtacgacgatgaggtgcgcaagtgggt 369
           || || || |||||||| |||||||||||||||||
Sbjct: 301 gcccgtgtttacgacgacgaggtgcgcaagtgggt 335



 Score =  123 bits (62), Expect = 8e-25
 Identities = 176/214 (82%)
 Strand = Plus / Plus

                                                                       
Query: 386 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
           |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 352 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 411

                                                                       
Query: 446 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
           ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 412 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 471

                                                                       
Query: 506 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
           ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 472 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 531

                                             
Query: 566 caggatgcgatgaagactggttccttctacggtt 599
              || || |||||||||||||||||||||||||
Sbjct: 532 tccgacgccatgaagactggttccttctacggtt 565

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  305 bits (154), Expect = 1e-79
 Identities = 266/302 (88%), Gaps = 1/302 (0%)
 Strand = Plus / Minus

                                                                          
Query: 12     cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
              |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 108989 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 108930

                                                                          
Query: 71     accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
              ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 108929 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 108870

                                                                          
Query: 131    gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 108869 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 108810

                                                                          
Query: 191    aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
              ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 108809 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 108750

                                                                          
Query: 251    accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
              |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 108749 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 108690

                
Query: 311    at 312
              ||
Sbjct: 108689 at 108688



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                          
Query: 386    gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
              |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 108522 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 108463

                                                                          
Query: 446    aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
              ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 108462 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 108403

                                                                          
Query: 506    gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
              ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 108402 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 108343

                                                   
Query: 566    caggatgcgatgaagactggttccttctacggttaga 602
                 || || ||||||||||||||||||||||||||||
Sbjct: 108342 tccgacgccatgaagactggttccttctacggttaga 108306



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 81/92 (88%), Gaps = 1/92 (1%)
 Strand = Plus / Minus

                                                                          
Query: 10     cgcagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccc 68
              |||||||||| || ||||||| |||||||||||| || |||||||||||||| ||   ||
Sbjct: 112668 cgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacatcgcggacaacc 112609

                                              
Query: 69     ccaccaacgtgcagctccctggcatgtacaac 100
              ||||||||||||||||||| || |||||||||
Sbjct: 112608 ccaccaacgtgcagctcccagggatgtacaac 112577



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                          
Query: 185    atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 244
              ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460

                  
Query: 245    ttcc 248
              ||||
Sbjct: 112459 ttcc 112456



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 320    ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
              ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 108588 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 386    gagaacattggcaagaggctggtgaactc 414
              |||||||| |||| |||||||||||||||
Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  305 bits (154), Expect = 1e-79
 Identities = 266/302 (88%), Gaps = 1/302 (0%)
 Strand = Plus / Minus

                                                                         
Query: 12    cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
             |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 30866 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 30807

                                                                         
Query: 71    accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
             ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 30806 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 30747

                                                                         
Query: 131   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
             |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 30746 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 30687

                                                                         
Query: 191   aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
             ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 30686 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 30627

                                                                         
Query: 251   accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
             |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 30626 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 30567

               
Query: 311   at 312
             ||
Sbjct: 30566 at 30565



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                         
Query: 386   gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
             |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 30399 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 30340

                                                                         
Query: 446   aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
             ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 30339 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 30280

                                                                         
Query: 506   gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
             ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 30279 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 30220

                                                  
Query: 566   caggatgcgatgaagactggttccttctacggttaga 602
                || || ||||||||||||||||||||||||||||
Sbjct: 30219 tccgacgccatgaagactggttccttctacggttaga 30183



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 81/92 (88%), Gaps = 1/92 (1%)
 Strand = Plus / Minus

                                                                         
Query: 10    cgcagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccc 68
             |||||||||| || ||||||| |||||||||||| || |||||||||||||| ||   ||
Sbjct: 34545 cgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacatcgcggacaacc 34486

                                             
Query: 69    ccaccaacgtgcagctccctggcatgtacaac 100
             ||||||||||||||||||| || |||||||||
Sbjct: 34485 ccaccaacgtgcagctcccagggatgtacaac 34454



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 185   atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 244
             ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337

                 
Query: 245   ttcc 248
             ||||
Sbjct: 34336 ttcc 34333



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 320   ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
             ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 30465 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 386   gagaacattggcaagaggctggtgaactc 414
             |||||||| |||| |||||||||||||||
Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  305 bits (154), Expect = 1e-79
 Identities = 266/302 (88%), Gaps = 1/302 (0%)
 Strand = Plus / Minus

                                                                            
Query: 12       cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
                |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 28304128 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 28304069

                                                                            
Query: 71       accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
                ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 28304068 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 28304009

                                                                            
Query: 131      gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
                |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 28304008 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 28303949

                                                                            
Query: 191      aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
                ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 28303948 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 28303889

                                                                            
Query: 251      accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
                |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 28303888 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 28303829

                  
Query: 311      at 312
                ||
Sbjct: 28303828 at 28303827



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                            
Query: 386      gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
                |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28303602

                                                                            
Query: 446      aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
                ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 28303601 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28303542

                                                                            
Query: 506      gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
                ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 28303541 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28303482

                                                     
Query: 566      caggatgcgatgaagactggttccttctacggttaga 602
                   || || ||||||||||||||||||||||||||||
Sbjct: 28303481 tccgacgccatgaagactggttccttctacggttaga 28303445



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 81/92 (88%), Gaps = 1/92 (1%)
 Strand = Plus / Minus

                                                                            
Query: 10       cgcagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccc 68
                |||||||||| || ||||||| |||||||||||| || |||||||||||||| ||   ||
Sbjct: 28307807 cgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacatcgcggacaacc 28307748

                                                
Query: 69       ccaccaacgtgcagctccctggcatgtacaac 100
                ||||||||||||||||||| || |||||||||
Sbjct: 28307747 ccaccaacgtgcagctcccagggatgtacaac 28307716



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 185      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 244
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599

                    
Query: 245      ttcc 248
                ||||
Sbjct: 28307598 ttcc 28307595



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 320      ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
                ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 28303727 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 386      gagaacattggcaagaggctggtgaactc 414
                |||||||| |||| |||||||||||||||
Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  305 bits (154), Expect = 1e-79
 Identities = 266/302 (88%), Gaps = 1/302 (0%)
 Strand = Plus / Minus

                                                                            
Query: 12       cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
                |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 28286577 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaaccca 28286518

                                                                            
Query: 71       accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
                ||||||||||||||||| || ||||||||||||||||| ||||||||||| |||||| ||
Sbjct: 28286517 accaacgtgcagctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatc 28286458

                                                                            
Query: 131      gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
                |||||||| ||||| ||||| ||||| ||||| || || |||||||| || |||||||||
Sbjct: 28286457 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggag 28286398

                                                                            
Query: 191      aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
                ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||  
Sbjct: 28286397 aagttctactgggctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgc 28286338

                                                                            
Query: 251      accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
                |||||||| |||   ||||||    |||||||||||||||||| ||||||||| ||||||
Sbjct: 28286337 accgacaacgtccccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatcc 28286278

                  
Query: 311      at 312
                ||
Sbjct: 28286277 at 28286276



 Score =  129 bits (65), Expect = 1e-26
 Identities = 179/217 (82%)
 Strand = Plus / Minus

                                                                            
Query: 386      gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 445
                |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 28286110 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28286051

                                                                            
Query: 446      aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 505
                ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 28286050 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28285991

                                                                            
Query: 506      gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 565
                ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 28285990 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28285931

                                                     
Query: 566      caggatgcgatgaagactggttccttctacggttaga 602
                   || || ||||||||||||||||||||||||||||
Sbjct: 28285930 tccgacgccatgaagactggttccttctacggttaga 28285894



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 81/92 (88%), Gaps = 1/92 (1%)
 Strand = Plus / Minus

                                                                            
Query: 10       cgcagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccc 68
                |||||||||| || ||||||| |||||||||||| || |||||||||||||| ||   ||
Sbjct: 28290256 cgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacatcgcggacaacc 28290197

                                                
Query: 69       ccaccaacgtgcagctccctggcatgtacaac 100
                ||||||||||||||||||| || |||||||||
Sbjct: 28290196 ccaccaacgtgcagctcccagggatgtacaac 28290165



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 185      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 244
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28290048

                    
Query: 245      ttcc 248
                ||||
Sbjct: 28290047 ttcc 28290044



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 320      ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 369
                ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 28286176 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28286127



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 386      gagaacattggcaagaggctggtgaactc 414
                |||||||| |||| |||||||||||||||
Sbjct: 28289940 gagaacatcggcaggaggctggtgaactc 28289912

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  295 bits (149), Expect = 1e-76
 Identities = 306/357 (85%), Gaps = 1/357 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           ||||||||||||||||||| |||||||||||||||||| ||||||||||||||   ||||
Sbjct: 417 cagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaacccc 476

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           |||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||| ||
Sbjct: 477 accaacgtccagctccccggcatgtacaacaagcaggagaacccccgcgtgcccatcatc 536

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| || |||||||| || || |||||||| ||||||||||||
Sbjct: 537 gtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatggag 596

                                                                       
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
           ||||||||||||||||||||| | || |||||  |||| |||||||  |||||||||  |
Sbjct: 597 aagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttcagg 656

                                                                       
Query: 251 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            ||||||| |||    | |||  |||| ||||| |||||||||||||||| || ||||||
Sbjct: 657 tccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaatcc 716

                                                                    
Query: 311 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 367
           |||||||| |||||||| ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 717 attgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 773



 Score =  125 bits (63), Expect = 2e-25
 Identities = 171/207 (82%)
 Strand = Plus / Plus

                                                                        
Query: 395  ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 454
            |||||||||||||||||||||| ||| |||||   ||| |||| |||||| |||||||| 
Sbjct: 801  ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 860

                                                                        
Query: 455  gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 514
             | || |||||||| ||||||||  ||||||| || ||||||||||| || || ||| | 
Sbjct: 861  ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 920

                                                                        
Query: 515  gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 574
            |||||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| |||
Sbjct: 921  gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 980

                                       
Query: 575  atgaagactggttccttctacggttag 601
            || |||||||| |||||||| ||||||
Sbjct: 981  atcaagactggatccttctatggttag 1007

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  295 bits (149), Expect = 1e-76
 Identities = 306/357 (85%), Gaps = 1/357 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           ||||||||||||||||||| |||||||||||||||||| ||||||||||||||   ||||
Sbjct: 611 cagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaacccc 670

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           |||||||| |||||||| ||||||||||||||| ||||||||||||| ||||||||| ||
Sbjct: 671 accaacgtccagctccccggcatgtacaacaagcaggagaacccccgcgtgcccatcatc 730

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| || |||||||| || || |||||||| ||||||||||||
Sbjct: 731 gtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatggag 790

                                                                       
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
           ||||||||||||||||||||| | || |||||  |||| |||||||  |||||||||  |
Sbjct: 791 aagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttcagg 850

                                                                       
Query: 251 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            ||||||| |||    | |||  |||| ||||| |||||||||||||||| || ||||||
Sbjct: 851 tccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaatcc 910

                                                                    
Query: 311 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 367
           |||||||| |||||||| ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 911 attgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 967



 Score =  119 bits (60), Expect = 1e-23
 Identities = 165/200 (82%)
 Strand = Plus / Plus

                                                                        
Query: 395  ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 454
            |||||||||||||||||||||| ||| |||||   ||| |||| |||||| |||||||| 
Sbjct: 995  ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 1054

                                                                        
Query: 455  gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 514
             | || |||||||| ||||||||  ||||||| || ||||||||||| || || ||| | 
Sbjct: 1055 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 1114

                                                                        
Query: 515  gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 574
            |||||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| |||
Sbjct: 1115 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 1174

                                
Query: 575  atgaagactggttccttcta 594
            || |||||||| ||||||||
Sbjct: 1175 atcaagactggatccttcta 1194

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  287 bits (145), Expect = 2e-74
 Identities = 305/357 (85%), Gaps = 1/357 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            ||||||||||||||||||| |||||||||||||||||| ||||||||||||||   ||||
Sbjct: 718  cagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaacccc 777

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||| ||
Sbjct: 778  accaacgtccagctccccggcatgtacaacaagcaagagaacccccgcgtgcccatcatc 837

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            |||||||| ||||| ||||| || |||||||| || || |||||||| ||||||||||||
Sbjct: 838  gtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatggag 897

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            ||||||||||||||||||||| | || |||||  |||| |||||||  |||||||||  |
Sbjct: 898  aagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttcagg 957

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
             ||||||| |||    | |||  |||| ||||| |||||||||||||||| || ||||||
Sbjct: 958  tccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaatcc 1017

                                                                     
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 367
            |||||||| |||||||| ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 1018 attgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 1074



 Score =  103 bits (52), Expect = 7e-19
 Identities = 166/204 (81%)
 Strand = Plus / Plus

                                                                        
Query: 398  aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 457
            ||||||||||||||||||| ||| |||||   ||| |||| |||||| ||||||||  | 
Sbjct: 1105 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1164

                                                                        
Query: 458  gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 517
            || |||||||| ||||||||  | ||||| || ||||| ||||| || || ||| | |||
Sbjct: 1165 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1224

                                                                        
Query: 518  cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 577
            ||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| ||||| 
Sbjct: 1225 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1284

                                    
Query: 578  aagactggttccttctacggttag 601
            |||||||| |||||||| ||||||
Sbjct: 1285 aagactggatccttctatggttag 1308

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  287 bits (145), Expect = 2e-74
 Identities = 305/357 (85%), Gaps = 1/357 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           ||||||||||||||||||| |||||||||||||||||| ||||||||||||||   ||||
Sbjct: 581 cagtacaccgtcaacaaccagatggtgaacgccaccctcatgaacatcgccgacaacccc 640

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           |||||||| |||||||| ||||||||||||||| | ||||||||||| ||||||||| ||
Sbjct: 641 accaacgtccagctccccggcatgtacaacaagcaagagaacccccgcgtgcccatcatc 700

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| || |||||||| || || |||||||| ||||||||||||
Sbjct: 701 gtcaccggcaacgacttctccaccctctacgcccccctcatccgtgacggtcgtatggag 760

                                                                       
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
           ||||||||||||||||||||| | || |||||  |||| |||||||  |||||||||  |
Sbjct: 761 aagttctactgggctcccaccagggatgaccgggtcggcgtctgcaccggtatcttcagg 820

                                                                       
Query: 251 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            ||||||| |||    | |||  |||| ||||| |||||||||||||||| || ||||||
Sbjct: 821 tccgacaacgtccccaaggaggatgtcatcaagctcgtcgacaccttccccggccaatcc 880

                                                                    
Query: 311 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 367
           |||||||| |||||||| ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 881 attgacttcttcggtgcactgagggcgagggtctacgacgacgaggtgaggaagtgg 937



 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 160/197 (81%)
 Strand = Plus / Plus

                                                                        
Query: 398  aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 457
            ||||||||||||||||||| ||| |||||   ||| |||| |||||| ||||||||  | 
Sbjct: 968  aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1027

                                                                        
Query: 458  gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 517
            || |||||||| ||||||||  | ||||| || ||||| ||||| || || ||| | |||
Sbjct: 1028 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1087

                                                                        
Query: 518  cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 577
            ||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| ||||| 
Sbjct: 1088 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1147

                             
Query: 578  aagactggttccttcta 594
            |||||||| ||||||||
Sbjct: 1148 aagactggatccttcta 1164

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  260 bits (131), Expect = 5e-66
 Identities = 294/347 (84%), Gaps = 1/347 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||| ||||||||||||||||||||||||||   ||||
Sbjct: 337 cagtacacggtgaacaaccagatggtcaacgccaccctgatgaacatcgccgacaacccc 396

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||| ||
Sbjct: 397 accaacgtgcagctcccggggatgtacaacaaggaggacaacccccgcgtgcccatcatc 456

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||||||||| || || ||||| || || || ||||||
Sbjct: 457 gtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatggag 516

                                                                       
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
           |||||||||||||| |||||||| || ||||| ||||| ||||||||||| |||||||  
Sbjct: 517 aagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatcttccgc 576

                                                                       
Query: 251 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
           ||||||   |||   || |||   |||||| || | |||||||||||||| || || |||
Sbjct: 577 accgacggcgtcgacgaggagcacgtcgtccagctggtcgacaccttccctggccagtcc 636

                                                          
Query: 311 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 357
           || ||||| ||||| || |||||||| ||||| |||||||| |||||
Sbjct: 637 atcgacttcttcggcgcgctgcgtgcccgggtctacgacgacgaggt 683



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                       
Query: 434 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 493
           ||||||||||| ||||| ||  ||||||||||  | |||||||| |||||||| ||   |
Sbjct: 760 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 819

                                                                       
Query: 494 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 553
           |||||||| || |||||||||||||||||||||||||  ||| | | | |||| ||||| 
Sbjct: 820 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 879

                                                   
Query: 554 ggtgatgctaaccaggatgcgatgaagactggttccttct 593
           ||||| || ||| |||| || ||||||||||| |||||||
Sbjct: 880 ggtgaagccaacgaggacgccatgaagactggctccttct 919

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  252 bits (127), Expect = 1e-63
 Identities = 293/347 (84%), Gaps = 1/347 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| || ||||||| |||||| ||||||||||||||||||||||||||   ||||
Sbjct: 732  cagtacacggtgaacaaccagatggtcaacgccaccctgatgaacatcgccgacaacccc 791

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            ||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||| ||
Sbjct: 792  accaacgtgcagctcccggggatgtacaacaaggaggacaacccccgcgtgcccatcatc 851

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            |||||||| ||||| ||||| ||||||||||| || || ||||| || || || ||||||
Sbjct: 852  gtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatggag 911

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            |||||||||||||| |||||||| || ||||| ||||| ||||||||||| |||||||  
Sbjct: 912  aagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatcttccgc 971

                                                                        
Query: 251  accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
            ||||||   |||   || |||   |||||| || | |||||||||||||| || || |||
Sbjct: 972  accgacggcgtcgacgaggagcacgtcgtccagctggtcgacaccttccctggccagtcc 1031

                                                           
Query: 311  attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggt 357
            || || || ||||| || |||||||| ||||| |||||||| |||||
Sbjct: 1032 atcgatttcttcggcgcgctgcgtgcccgggtctacgacgacgaggt 1078



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                        
Query: 434  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 493
            ||||||||||| ||||| ||  ||||||||||  | |||||||| |||||||| ||   |
Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214

                                                                        
Query: 494  gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 553
            |||||||| || |||||||||||||||||||||||||  ||| | | | |||| ||||| 
Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274

                                                    
Query: 554  ggtgatgctaaccaggatgcgatgaagactggttccttct 593
            ||||| || ||| |||| || ||||||||||| |||||||
Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  232 bits (117), Expect = 1e-57
 Identities = 286/341 (83%), Gaps = 1/341 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 278 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 337

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||||||
Sbjct: 338 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcgtc 397

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || || || || || || ||||| 
Sbjct: 398 gtcaccggcaacgacttctccacgctgtacgcgccgctcattcgcgacgggcgcatggac 457

                                                                       
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||  
Sbjct: 458 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttccgc 517

                                                                       
Query: 251 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
           ||||||   |||   ||||||   |||||| || |||||||| ||||||| || || |||
Sbjct: 518 accgacggcgtccccgacgagcacgtcgtccagctcgtcgacgccttcccgggccagtcc 577

                                                    
Query: 311 attgactttttcggtgctctgcgtgctcgggtgtacgacga 351
           || ||||| ||||| || || || || ||||||||||||||
Sbjct: 578 atcgacttcttcggcgccctccgcgcccgggtgtacgacga 618

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  232 bits (117), Expect = 1e-57
 Identities = 286/341 (83%), Gaps = 1/341 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 286 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 345

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||||||
Sbjct: 346 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcgtc 405

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| 
Sbjct: 406 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 465

                                                                       
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
           |||||||||||||| |||||||| || ||||| ||||| || |||||||| |||||||  
Sbjct: 466 aagttctactgggcgcccacccgggaggaccgcatcggcgtgtgcaagggcatcttccgc 525

                                                                       
Query: 251 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 310
           ||||||   |||   ||||||   |||||| || |||||||| ||||||| || || |||
Sbjct: 526 accgacggcgtccccgacgagcacgtcgtccagctcgtcgacgccttcccgggccagtcc 585

                                                    
Query: 311 attgactttttcggtgctctgcgtgctcgggtgtacgacga 351
           || ||||| ||||| || || || || ||||||||||||||
Sbjct: 586 atcgacttcttcggcgccctccgcgcccgggtgtacgacga 626

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  228 bits (115), Expect = 2e-56
 Identities = 212/243 (87%), Gaps = 1/243 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  tacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
           |||||||||||||||| |||||| ||||| ||||| |||||||||||||||  |||||||
Sbjct: 611 tacaccgtcaacaaccagatggttaacgctaccctcatgaacatcgccgataaccccacc 670

                                                                       
Query: 74  aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
           ||||| |||||||| || |||||||||||||| |||||||||||||| |||||| |||||
Sbjct: 671 aacgtccagctccccggtatgtacaacaaggaagagaacccccgtgtccccatcatcgtc 730

                                                                       
Query: 134 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
           || |||||||||||||| || || || |||||||| |||||||| |||||||||||||| 
Sbjct: 731 actggtaacgatttctccacactgtatgctcctctcatccgtgacggtcgtatggagaaa 790

                                                                       
Query: 194 ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 253
           || |||||||| || ||  | ||||||||||||||||| ||||| ||||| |||  ||||
Sbjct: 791 ttttactgggcaccaactagggacgaccgtatcggtgtttgcaaaggtattttcaggacc 850

              
Query: 254 gac 256
           |||
Sbjct: 851 gac 853



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 285 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 344
           |||||||||||||||| || |||||||| || || ||||||||  || | |||||||| |
Sbjct: 882 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 941

               
Query: 345 acga 348
           ||||
Sbjct: 942 acga 945

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  226 bits (114), Expect = 7e-56
 Identities = 208/238 (87%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 292 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 351

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 352 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 411

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| 
Sbjct: 412 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 471

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 472 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  226 bits (114), Expect = 7e-56
 Identities = 208/238 (87%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 294 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 353

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 354 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 413

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| 
Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 473

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  226 bits (114), Expect = 7e-56
 Identities = 208/238 (87%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 298 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 357

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 358 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 417

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| 
Sbjct: 418 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 477

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 478 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 535

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  226 bits (114), Expect = 7e-56
 Identities = 208/238 (87%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 294 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 353

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 354 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 413

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| 
Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 473

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  226 bits (114), Expect = 7e-56
 Identities = 208/238 (87%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 294 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 353

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 354 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 413

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| 
Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 473

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  226 bits (114), Expect = 7e-56
 Identities = 208/238 (87%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 294 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 353

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 354 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 413

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| 
Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 473

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  226 bits (114), Expect = 7e-56
 Identities = 208/238 (87%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 294 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 353

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 354 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 413

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| 
Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 473

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  226 bits (114), Expect = 7e-56
 Identities = 208/238 (87%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 296 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 355

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 356 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 415

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || |||||||| || || ||||| 
Sbjct: 416 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgtgacgggcgcatggac 475

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 476 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 533

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  218 bits (110), Expect = 2e-53
 Identities = 264/314 (84%), Gaps = 1/314 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   tacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
            |||||||| ||||||| |||||| ||||||||||| |||||||| || ||   |||||||
Sbjct: 851  tacaccgtgaacaaccagatggttaacgccaccctcatgaacattgctgacaaccccacc 910

                                                                        
Query: 74   aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
            || || || |||||||| |||||||||||| | |||||| ||||||| |||||  |||||
Sbjct: 911  aatgtccaactccctggtatgtacaacaagcaagagaacgcccgtgttcccattatcgtc 970

                                                                        
Query: 134  accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
            || |||||||| ||||| ||  | |||||||| || ||||||||||||||||||||||||
Sbjct: 971  actggtaacgacttctccaccttgtacgctccccttatccgtgatggtcgtatggagaag 1030

                                                                        
Query: 194  ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 253
            ||||||||||||||||||||||| ||||||||||||||   ||  |||||||||  ||||
Sbjct: 1031 ttctactgggctcccacccgtgaggaccgtatcggtgttgccaccggtatcttcaggacc 1090

                                                                        
Query: 254  gacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccatt 313
            ||||||||   ||| ||    || |||||| |||||||||||||||| || ||||| |||
Sbjct: 1091 gacaatgttcctgaggaccacgttgtcaagctcgtcgacaccttccctggccaatctatt 1150

                          
Query: 314  gactttttcggtgc 327
            || || ||||||||
Sbjct: 1151 gatttcttcggtgc 1164

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  218 bits (110), Expect = 2e-53
 Identities = 207/238 (86%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 296 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 355

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 356 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 415

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| 
Sbjct: 416 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 475

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 476 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 533

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  218 bits (110), Expect = 2e-53
 Identities = 207/238 (86%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 294 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 353

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 354 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 413

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| 
Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 473

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  218 bits (110), Expect = 2e-53
 Identities = 207/238 (86%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 292 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 351

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 352 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 411

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| 
Sbjct: 412 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 471

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 472 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  218 bits (110), Expect = 2e-53
 Identities = 207/238 (86%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 292 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 351

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 352 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 411

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| 
Sbjct: 412 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 471

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 472 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  218 bits (110), Expect = 2e-53
 Identities = 207/238 (86%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 294 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 353

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 354 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 413

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| 
Sbjct: 414 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 473

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 474 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  218 bits (110), Expect = 2e-53
 Identities = 207/238 (86%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||||||||||||||||||||||||||||||   ||||
Sbjct: 298 cagtacacggtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccc 357

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||| ||||| ||| ||||| |||||||||||| ||
Sbjct: 358 accaacgtgcagctcccggggatgtacagcaaggtggacaacccgcgtgtgcccatcatc 417

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||| ||||| || || ||||| || || || ||||| 
Sbjct: 418 gtcaccggcaacgacttctccacgctgtacgcgccgctcatccgcgacgggcgcatggac 477

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 478 aagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 535

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  216 bits (109), Expect = 7e-53
 Identities = 206/237 (86%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| |||||||||| |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 898  cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 957

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 958  accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 1017

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 1018 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 1077

                                                                     
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
            |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1078 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  216 bits (109), Expect = 7e-53
 Identities = 206/237 (86%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| |||||||||| |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 898  cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 957

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 958  accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 1017

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 1018 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 1077

                                                                     
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
            |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1078 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  216 bits (109), Expect = 7e-53
 Identities = 206/237 (86%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| |||||||||| |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 927  cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 986

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 987  accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 1046

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 1047 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 1106

                                                                     
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
            |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1107 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  216 bits (109), Expect = 7e-53
 Identities = 206/237 (86%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| |||||||||| |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 809  cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 868

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 869  accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 928

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 929  tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 988

                                                                     
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
            |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 989  aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  216 bits (109), Expect = 7e-53
 Identities = 206/237 (86%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| |||||||||| |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 724 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 783

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 784 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 843

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
             ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 844 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 903

                                                                    
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
           |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 904 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 960

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  216 bits (109), Expect = 7e-53
 Identities = 206/237 (86%), Gaps = 1/237 (0%)
 Strand = Plus / Minus

                                                                         
Query: 12    cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
             |||||||| |||||||||| |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 14390 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 14331

                                                                         
Query: 71    accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
             |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 14330 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 14271

                                                                         
Query: 131   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
               ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 14270 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 14211

                                                                      
Query: 191   aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
             |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 14210 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 14154

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  216 bits (109), Expect = 7e-53
 Identities = 206/237 (86%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| |||||||||| |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 812  cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 871

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 872  accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 931

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 932  tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 991

                                                                     
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
            |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 992  aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  216 bits (109), Expect = 7e-53
 Identities = 206/237 (86%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| |||||||||| |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 809  cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 868

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 869  accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 928

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 929  tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 988

                                                                     
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
            |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 989  aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  216 bits (109), Expect = 7e-53
 Identities = 206/237 (86%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| |||||||||| |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 812  cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 871

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 872  accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 931

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 932  tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 991

                                                                     
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
            |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 992  aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  216 bits (109), Expect = 7e-53
 Identities = 206/237 (86%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| |||||||||| |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 2893 cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 2952

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 2953 accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 3012

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 3013 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 3072

                                                                     
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
            |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 3073 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 3129

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  212 bits (107), Expect = 1e-51
 Identities = 205/238 (86%), Gaps = 1/238 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||| ||||||||||||||||||||||||||   ||||
Sbjct: 732 cagtacacggtgaacaaccagatggtcaacgccaccctgatgaacatcgccgacaacccc 791

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||||||||||||||| || ||||||||||||||||| ||     | ||||||||| ||
Sbjct: 792 accaacgtgcagctcccggggatgtacaacaaggaggacaannnnngcgtgcccatcatc 851

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           |||||||| ||||| ||||| ||||||||||| || || ||||| || || || ||||||
Sbjct: 852 gtcaccggcaacgacttctccacgctctacgcgccgctcatccgcgacggccgcatggag 911

                                                                     
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 248
           |||||||||||||| |||||||| || ||||| ||||| ||||||||||| |||||||
Sbjct: 912 aagttctactgggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatcttcc 969



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 132/160 (82%)
 Strand = Plus / Plus

                                                                        
Query: 434  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 493
            ||||||||||| ||||| ||  ||||||||||  | |||||||| |||||||| ||   |
Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214

                                                                        
Query: 494  gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 553
            |||||||| || |||||||||||||||||||||||||  ||| | | | |||| ||||| 
Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274

                                                    
Query: 554  ggtgatgctaaccaggatgcgatgaagactggttccttct 593
            ||||| || ||| |||| || ||||||||||| |||||||
Sbjct: 1275 ggtgaagccaacgaggacgccatgaagactggctccttct 1314

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  208 bits (105), Expect = 2e-50
 Identities = 205/237 (86%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| |||||||||| |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 801  cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 860

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||| ||||| || || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 861  accaacgtccagcttccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 920

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 921  tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 980

                                                                     
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
            |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 981  aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1037

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  208 bits (105), Expect = 2e-50
 Identities = 205/237 (86%), Gaps = 1/237 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| |||||||| | |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 927  cagtacactgtcaacaatcagatggttaacgcaacactcatgaacattgctgataaccca 986

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 987  accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 1046

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              ||| |||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct: 1047 tgcactggtaacgatttctccaccctatacgctcctctcatccgtgatggacgtatggag 1106

                                                                     
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
            |||||||||||||| || |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1107 aagttctactgggccccgacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  204 bits (103), Expect = 3e-49
 Identities = 209/243 (86%), Gaps = 1/243 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  tacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
           |||||||||||||||| |||||| || || ||||| |||||||||||||||  |||||||
Sbjct: 610 tacaccgtcaacaaccagatggttaatgctaccctcatgaacatcgccgataaccccacc 669

                                                                       
Query: 74  aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
           ||||| |||||||| || |||||||||||||| |||||||||||||| |||||  |||||
Sbjct: 670 aacgtccagctccccggtatgtacaacaaggaagagaacccccgtgtccccattatcgtc 729

                                                                       
Query: 134 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
           || |||||||||||||| || || || |||||||| |||||||| |||||||||||||| 
Sbjct: 730 actggtaacgatttctccacactgtatgctcctctcatccgtgacggtcgtatggagaaa 789

                                                                       
Query: 194 ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 253
           || |||||||| || ||  | ||||||||| ||||||| ||||| ||||| |||  ||||
Sbjct: 790 ttttactgggcaccaactagggacgaccgtgtcggtgtttgcaaaggtattttcaggacc 849

              
Query: 254 gac 256
           |||
Sbjct: 850 gac 852



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 285 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 344
           |||||||||||||||| || |||||||| || || ||||||||  || | |||||||| |
Sbjct: 881 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 940

               
Query: 345 acga 348
           ||||
Sbjct: 941 acga 944

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score =  196 bits (99), Expect = 7e-47
 Identities = 193/223 (86%), Gaps = 1/223 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   tacaccgtcaacaaccga-tggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
            ||||| |||||||||| | ||||||| |||||||| |||||||| || |||  ||| || 
Sbjct: 812  tacactgtcaacaaccaaatggtgaatgccaccctcatgaacattgctgataacccgaca 871

                                                                        
Query: 74   aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
            ||||| ||||| || || ||||||||||||||||||||||||||||| || ||| | |||
Sbjct: 872  aacgtccagcttccaggtatgtacaacaaggaggagaacccccgtgtcccaatcattgtc 931

                                                                        
Query: 134  accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
            ||||||||||||||||| ||  | ||||||||||| |||||||| |||||||||||||||
Sbjct: 932  accggtaacgatttctcaacattgtacgctcctctcatccgtgacggtcgtatggagaag 991

                                                       
Query: 194  ttctactgggctcccacccgtgacgaccgtatcggtgtctgca 236
            |||||||||||||||||||| || || ||||| || |||||||
Sbjct: 992  ttctactgggctcccacccgcgaagatcgtattggagtctgca 1034



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 106/132 (80%)
 Strand = Plus / Plus

                                                                        
Query: 434  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 493
            ||||||||||| ||||||||  |||| ||||| || ||||||||  ||||||| ||||| 
Sbjct: 1232 ttcgagcagccgaagatgactatcgaaaagctcctcgagtacggaaacatgcttgtccaa 1291

                                                                        
Query: 494  gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 553
            ||||| || ||||| ||| | || ||  | ||||| |  ||| ||||| |||| ||||| 
Sbjct: 1292 gagcaagagaatgtgaagagagttcaattggctgataagtacttgagcgaggctgctctt 1351

                        
Query: 554  ggtgatgctaac 565
            ||||||||||||
Sbjct: 1352 ggtgatgctaac 1363



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                        
Query: 290  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 349
            |||||||||||||| ||||| ||||| || || |||||  || | ||| |||| ||||||
Sbjct: 1088 gacaccttcccaggccaatctattgatttctttggtgccttgagggctagggtttacgac 1147

                              
Query: 350  gatgaggtgcgcaagtgg 367
            ||||| ||| | ||||||
Sbjct: 1148 gatgaagtgaggaagtgg 1165

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 1 mRNA, complete cds
          Length = 1559

 Score =  194 bits (98), Expect = 3e-46
 Identities = 197/230 (85%)
 Strand = Plus / Plus

                                                                        
Query: 32   atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 91
            |||||||||||||| || ||||||||||| |||  |||||||||||| |||||||| || 
Sbjct: 814  atggtgaacgccacactcatgaacatcgctgataaccccaccaacgttcagctccccggt 873

                                                                        
Query: 92   atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 151
            |||||||||||||| |||||||| ||||| || ||| | |||||||||||||||||||||
Sbjct: 874  atgtacaacaaggaagagaaccctcgtgttccgatcattgtcaccggtaacgatttctcg 933

                                                                        
Query: 152  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 211
            ||||| ||||| || || |||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 934  acgctgtacgcgccgctcatccgtgacggtcgtatggagaagttttactgggcacccacc 993

                                                              
Query: 212  cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 261
             | || ||  | |||||||| ||||  ||||| |||  ||||||||||||
Sbjct: 994  agggaagataggatcggtgtttgcacaggtattttcaggaccgacaatgt 1043



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                      
Query: 290  gacaccttcccaggacaatccattgactttttcggtgctctg 331
            ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgctctg 1113

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  190 bits (96), Expect = 4e-45
 Identities = 211/248 (85%), Gaps = 1/248 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   tacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
            ||||| || ||||||| ||||||||| |||||||| |||||||| || ||   ||| || 
Sbjct: 796  tacactgttaacaaccagatggtgaatgccaccctcatgaacattgctgacaacccaaca 855

                                                                        
Query: 74   aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
            || || ||||||||||| |||||||||||||| |||||||| |||||||| ||| | |||
Sbjct: 856  aatgtccagctccctggtatgtacaacaaggaagagaaccctcgtgtgcctatcattgtc 915

                                                                        
Query: 134  accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
            || |||||||| ||||||||  | ||||||||||| |||||||||||||||||||| || 
Sbjct: 916  actggtaacgacttctcgacattgtacgctcctcttatccgtgatggtcgtatggaaaaa 975

                                                                        
Query: 194  ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 253
            |||||||||||||| ||| | || |||||||| ||||||||||||||||| |||  ||| 
Sbjct: 976  ttctactgggctcctaccagggaagaccgtattggtgtctgcaagggtattttcaggact 1035

                    
Query: 254  gacaatgt 261
            ||||||||
Sbjct: 1036 gacaatgt 1043



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 524  gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgc 573
            |||||||  ||||||||  |||| || || ||||||||||||||||||||
Sbjct: 1306 gctgacaagtacatgagtgaggctgcccttggtgatgctaaccaggatgc 1355

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  178 bits (90), Expect = 2e-41
 Identities = 205/242 (84%), Gaps = 1/242 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   tacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
            ||||| || ||||||| ||||||||| ||||| || |||||||| || |||  |||||| 
Sbjct: 801  tacactgtgaacaaccagatggtgaatgccactctcatgaacattgctgataaccccaca 860

                                                                        
Query: 74   aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
            || |||||||| ||||| |||||||||||||| || ||| |||||||||||||| | |||
Sbjct: 861  aatgtgcagcttcctggtatgtacaacaaggaagataacgcccgtgtgcccatcattgtc 920

                                                                        
Query: 134  accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
            || |||||||||||||| || || || |||||||| ||||||||||||||||||||||||
Sbjct: 921  actggtaacgatttctcaacactttatgctcctctcatccgtgatggtcgtatggagaag 980

                                                                        
Query: 194  ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 253
            ||||||||||| || ||  | || ||||| || ||||| |||||||| || |||| ||||
Sbjct: 981  ttctactgggcaccaacaagggaagaccgcattggtgtttgcaagggaattttccggacc 1040

              
Query: 254  ga 255
            ||
Sbjct: 1041 ga 1042

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  176 bits (89), Expect = 6e-41
 Identities = 189/221 (85%), Gaps = 1/221 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   tacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
            |||||||| ||||||| |||||| |||||||| || |||||||| || ||   ||| |||
Sbjct: 2593 tacaccgtaaacaaccagatggttaacgccacactcatgaacattgctgacaacccaacc 2652

                                                                        
Query: 74   aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
            || || || |||||||| |||||||||||| |||| ||  ||||||| |||||| | || 
Sbjct: 2653 aatgtccaactccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgtt 2712

                                                                        
Query: 134  accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
            || |||||||||||||| ||  | |||||||| || ||||||||||||||||||||||||
Sbjct: 2713 actggtaacgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaag 2772

                                                     
Query: 194  ttctactgggctcccacccgtgacgaccgtatcggtgtctg 234
            ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 2773 ttctactgggctcccacccgtgaggaccgtattggtgtctg 2813

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  168 bits (85), Expect = 1e-38
 Identities = 188/221 (85%), Gaps = 1/221 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   tacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
            |||||||| ||||||| |||||| |||||||| ||  ||||||| || ||   ||| |||
Sbjct: 965  tacaccgtaaacaaccagatggttaacgccacactcctgaacattgctgacaacccaacc 1024

                                                                        
Query: 74   aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
            || || || |||||||| |||||||||||| |||| ||  ||||||| |||||| | || 
Sbjct: 1025 aatgtccaactccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgtt 1084

                                                                        
Query: 134  accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
            || |||||||||||||| ||  | |||||||| || ||||||||||||||||||||||||
Sbjct: 1085 actggtaacgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaag 1144

                                                     
Query: 194  ttctactgggctcccacccgtgacgaccgtatcggtgtctg 234
            ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1145 ttctactgggctcccacccgtgaggaccgtattggtgtctg 1185



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                        
Query: 285  tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 344
            |||| ||| ||||||| |||||||| || ||||||||||| ||  || | ||||| || |
Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcggagcgttgagggctcgtgtat 1295

                      
Query: 345  acgacgatga 354
            ||||||||||
Sbjct: 1296 acgacgatga 1305

---

>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score =  167 bits (84), Expect = 6e-38
 Identities = 208/248 (83%), Gaps = 1/248 (0%)
 Strand = Plus / Plus

                                                                       
Query: 16  acaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacca 74
           |||| |||||||||| |||||| ||||||||||| |||||||| || ||   ||| ||||
Sbjct: 1   acactgtcaacaaccagatggttaacgccaccctcatgaacattgctgacaacccaacca 60

                                                                       
Query: 75  acgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtca 134
           | || ||||||||||| |||||||||||| |||| ||  | ||||| |||||| |||| |
Sbjct: 61  atgtccagctccctggtatgtacaacaagcaggacaatgctcgtgtacccatcatcgtta 120

                                                                       
Query: 135 ccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagt 194
           | |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||| |
Sbjct: 121 ctggtaacgacttctctaccttgtatgctcctctcatccgtgatggtcgtatggagaaat 180

                                                                       
Query: 195 tctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccg 254
           |||||||||| ||||| ||||| |||||||| ||||| ||||  |||||||||  ||| |
Sbjct: 181 tctactgggcacccactcgtgaggaccgtattggtgtttgcactggtatcttcaggactg 240

                   
Query: 255 acaatgtc 262
           ||||||||
Sbjct: 241 acaatgtc 248

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score =  165 bits (83), Expect = 2e-37
 Identities = 189/223 (84%), Gaps = 1/223 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  tacaccgtcaacaaccga-tggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
           ||||| |||||||||| | ||||||| ||||| || |||||||| || |||  |||||||
Sbjct: 234 tacactgtcaacaaccaaatggtgaatgccacactcatgaacattgctgataaccccacc 293

                                                                       
Query: 74  aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
           || || || |||||||| |||||||||||||| || ||  | |||||||||||| | |||
Sbjct: 294 aatgtccaactccctggtatgtacaacaaggaagacaatgctcgtgtgcccatcattgtc 353

                                                                       
Query: 134 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
           |||||||| |||||||| || || || |||||||| ||||||||||||||||||||||||
Sbjct: 354 accggtaatgatttctcaacactttatgctcctctcatccgtgatggtcgtatggagaag 413

                                                      
Query: 194 ttctactgggctcccacccgtgacgaccgtatcggtgtctgca 236
           |||||||||||||| ||  | || || ||||| ||||||||||
Sbjct: 414 ttctactgggctcctactagagaagatcgtattggtgtctgca 456



 Score = 48.1 bits (24), Expect = 0.038
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 278 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 337
           |||||||| || ||||||||||| || |||||||| || || ||||||||  || | |||
Sbjct: 498 gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgcattgagggct 557

                                           
Query: 338 cgggtgtacgacgatgaggtgcgcaagtgggt 369
            | |||||||| ||||| ||| | ||||||||
Sbjct: 558 agagtgtacgatgatgaagtgaggaagtgggt 589

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  165 bits (83), Expect = 2e-37
 Identities = 165/191 (86%), Gaps = 1/191 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  tacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
           ||||| || ||||||| ||||||||| ||||| || |||||||| || |||  ||| || 
Sbjct: 805 tacactgtgaacaaccagatggtgaatgccactctcatgaacattgctgataaccctaca 864

                                                                       
Query: 74  aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
           || |||||||| ||||| |||||||||||||| |||||| |||||||||||||| | |||
Sbjct: 865 aatgtgcagcttcctggtatgtacaacaaggaagagaacgcccgtgtgcccatcattgtc 924

                                                                       
Query: 134 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
           |||||||| |||||||| ||||| || |||||||| || |||||||| ||||||||||||
Sbjct: 925 accggtaatgatttctcaacgctgtatgctcctctcattcgtgatgggcgtatggagaag 984

                      
Query: 194 ttctactgggc 204
           |||||||||||
Sbjct: 985 ttctactgggc 995

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  149 bits (75), Expect = 1e-32
 Identities = 174/207 (84%)
 Strand = Plus / Plus

                                                                        
Query: 31   gatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctgg 90
            ||||||||| |||||||| |||||||| || ||   ||| || || || ||||| |||||
Sbjct: 813  gatggtgaatgccaccctcatgaacatagctgacaacccaacaaatgtccagcttcctgg 872

                                                                        
Query: 91   catgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctc 150
            ||||||||||||||| |||||||| ||||| |||||| | ||||| |||||||| |||||
Sbjct: 873  catgtacaacaaggaagagaaccctcgtgttcccatcattgtcactggtaacgacttctc 932

                                                                        
Query: 151  gacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccac 210
             ||  | || || ||||| ||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 933  aacattgtatgcccctcttatccgtgatggccgtatggagaaattctactgggcacccac 992

                                       
Query: 211  ccgtgacgaccgtatcggtgtctgcaa 237
            | | || |||||||| |||||||||||
Sbjct: 993  cagggaggaccgtattggtgtctgcaa 1019



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 68/84 (80%)
 Strand = Plus / Plus

                                                                        
Query: 481  catgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgag 540
            |||||| |||||||||||||| || |||||| | || ||  | |||||||  ||||||  
Sbjct: 1263 catgcttgtccaggagcaggagaacgtcaagagagttcaattagctgacaaatacatgtc 1322

                                    
Query: 541  ccaggcagctctgggtgatgctaa 564
            | |||| ||||| |||||||||||
Sbjct: 1323 cgaggctgctcttggtgatgctaa 1346

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score =  145 bits (73), Expect = 2e-31
 Identities = 278/345 (80%), Gaps = 1/345 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  tacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
           ||||| |||||||||| ||||||||| ||||| || ||||||||||| |||  ||| || 
Sbjct: 118 tacactgtcaacaaccagatggtgaatgccactctcatgaacatcgctgataacccgaca 177

                                                                       
Query: 74  aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
           || || |||||||| || |||||||||||| | |||||| || | || |||||  | |||
Sbjct: 178 aatgtccagctccccggtatgtacaacaagcaagagaacgccagggtccccattattgtc 237

                                                                       
Query: 134 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
           || |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||||
Sbjct: 238 actggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaag 297

                                                                       
Query: 194 ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 253
           ||||| ||||| || ||  | || ||  | || ||||| ||||||||||| |||  ||||
Sbjct: 298 ttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcaggacc 357

                                                                       
Query: 254 gacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccatt 313
           ||||| ||   ||| ||  |||| || ||||| ||||| |||||||| |||||||| |||
Sbjct: 358 gacaacgtgcctgaggaagctgttgtaaagattgtcgataccttccctggacaatctatt 417

                                                        
Query: 314 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 358
           ||||| || ||||||||| | || || || ||||| |||||||||
Sbjct: 418 gacttctttggtgctctgagggcacgagtatacgatgatgaggtg 462

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score =  143 bits (72), Expect = 9e-31
 Identities = 199/240 (82%), Gaps = 1/240 (0%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| |||||||||| |||||| ||||| ||||| ||||||||||| |||  ||| 
Sbjct: 1622 cagtacactgtcaacaaccagatggtcaacgctaccctcatgaacatcgctgataaccct 1681

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||||||||| || ||| |||||||  ||| | |||  |||||||| ||||| |||
Sbjct: 1682 accaacgtgcagctgcccggcgtgtacaaggaggtgcagattccccgtgttcccattgtc 1741

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              ||| |||||||||||||| || || ||||| || || |||||||| || || ||||||
Sbjct: 1742 tgcacgggtaacgatttctccaccctgtacgcccccctcatccgtgacggccgcatggag 1801

                                                                        
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
            |||| |||||||   ||||||||||| ||||| ||||| ||||||| ||| |||||||||
Sbjct: 1802 aagtactactggaaccccacccgtgaggaccgcatcggcgtctgcatgggaatcttccag 1861



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 494  gagcaggacaatgtcaagcgtgtgcagct 522
            |||||||| ||||||||||| ||||||||
Sbjct: 2105 gagcaggagaatgtcaagcgcgtgcagct 2133

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score =  139 bits (70), Expect = 1e-29
 Identities = 136/158 (86%)
 Strand = Plus / Plus

                                                                       
Query: 50  atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggag 109
           |||||||| || |||  ||| ||||| || || |||||||| |||||| |||||||||||
Sbjct: 262 atgaacattgctgataacccaaccaatgtccaactccctggaatgtacgacaaggaggag 321

                                                                       
Query: 110 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 169
           |||||||||||||||||| ||||||| || |||||||||||  | || || ||||| || 
Sbjct: 322 aacccccgtgtgcccatcatcgtcacaggaaacgatttctcagcactatatgctcccctt 381

                                                 
Query: 170 atccgtgatggtcgtatggagaagttctactgggctcc 207
           ||||| |||||||||||||| |||||||||||||||||
Sbjct: 382 atccgcgatggtcgtatggaaaagttctactgggctcc 419

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score =  137 bits (69), Expect = 5e-29
 Identities = 150/177 (84%)
 Strand = Plus / Plus

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           ||||| || |||||||| || |||||||||||||| ||||| || ||||| || ||| ||
Sbjct: 696 accaatgttcagctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatc 755

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           ||||| ||||| || ||||||||  | ||||||||||| || ||||||||||||||||||
Sbjct: 756 gtcacaggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggag 815

                                                                    
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
           || ||||||||||| |||||| | || ||||| || ||||||||||  |||||||||
Sbjct: 816 aaattctactgggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 872

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  137 bits (69), Expect = 5e-29
 Identities = 150/177 (84%)
 Strand = Plus / Plus

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            ||||| || |||||||| || |||||||||||||| ||||| || ||||| || ||| ||
Sbjct: 869  accaatgttcagctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatc 928

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            ||||| ||||| || ||||||||  | ||||||||||| || ||||||||||||||||||
Sbjct: 929  gtcacaggtaatgacttctcgacattgtacgctcctctcattcgtgatggtcgtatggag 988

                                                                     
Query: 191  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 247
            || ||||||||||| |||||| | || ||||| || ||||||||||  |||||||||
Sbjct: 989  aaattctactgggcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 1045

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase mRNA, complete cds
          Length = 1693

 Score =  135 bits (68), Expect = 2e-28
 Identities = 198/240 (82%), Gaps = 1/240 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           ||||||||||| ||||||| |||||||||||||||||||||||||||||||||   ||| 
Sbjct: 693 cagtacaccgtgaacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccg 752

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           |||||||| ||||| || ||  ||||||| || ||||||| ||| || |||||||| || 
Sbjct: 753 accaacgtccagctgcccggtgtgtacaagaacgaggagatccctcgcgtgcccattgtg 812

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
             ||| || ||||| ||||| || || ||||| || |||||||| ||||| || ||||||
Sbjct: 813 tgcacgggcaacgacttctccaccctgtacgcgcccctgatccgcgatggccgcatggag 872

                                                                       
Query: 191 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 250
           |||| |||||||   |||||||| || ||||| ||||| || |||| ||| |||||||||
Sbjct: 873 aagtactactggaaccccacccgcgaggaccgcatcggcgtgtgcatgggcatcttccag 932



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 290  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 349
            ||||||||||| || || ||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 972  gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 1031

              
Query: 350  ga 351
            ||
Sbjct: 1032 ga 1033

---

>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score =  133 bits (67), Expect = 8e-28
 Identities = 124/143 (86%)
 Strand = Plus / Plus

                                                                       
Query: 94  gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 153
           ||||||||| || |||||||||||||||||| || | ||||||||||| |||||||| ||
Sbjct: 1   gtacaacaaagaagagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccac 60

                                                                       
Query: 154 gctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccg 213
             | || ||||| || ||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 61  cttgtatgctccccttatccgtgatggtcgtatggagaaattctactgggcaccaacccg 120

                                  
Query: 214 tgacgaccgtatcggtgtctgca 236
            ||||| ||||| ||||||||||
Sbjct: 121 cgacgatcgtattggtgtctgca 143

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
            (pJQ4)
          Length = 1655

 Score =  129 bits (65), Expect = 1e-26
 Identities = 276/345 (80%), Gaps = 1/345 (0%)
 Strand = Plus / Plus

                                                                        
Query: 15   tacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
            ||||| |||||||||| ||||||||| ||||| || |||||||| || |||  ||| || 
Sbjct: 762  tacactgtcaacaaccagatggtgaatgccactctcatgaacattgctgataacccgaca 821

                                                                        
Query: 74   aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
            ||||| |||||||| || |||||||||||| | |||||| || | || |||||  | |||
Sbjct: 822  aacgtccagctccccggtatgtacaacaagcaagagaacgccagagtccccattattgtc 881

                                                                        
Query: 134  accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
            || |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||||
Sbjct: 882  actggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaag 941

                                                                        
Query: 194  ttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagacc 253
            ||||| ||||| || ||  | || ||  | || ||||| ||||||||||| |||  ||||
Sbjct: 942  ttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcaggacc 1001

                                                                        
Query: 254  gacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccatt 313
            ||||| ||   ||| ||  | ||  | ||||| ||||| |||||||| |||||||| |||
Sbjct: 1002 gacaacgtgcctgaggaagccgttataaagattgtcgataccttccctggacaatctatt 1061

                                                         
Query: 314  gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 358
            ||||| || ||||||||| | || || || ||||| |||||||||
Sbjct: 1062 gacttctttggtgctctgagggcacgagtatacgatgatgaggtg 1106

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score =  127 bits (64), Expect = 5e-26
 Identities = 188/226 (83%), Gaps = 5/226 (2%)
 Strand = Plus / Plus

                                                                        
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
            |||||||| |||||||||| |||||| ||||| || || |||||||| || |||  ||| 
Sbjct: 793  cagtacactgtcaacaaccagatggttaacgcaacactcatgaacattgctgataaccca 852

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            |||||||| |||||||| || |||||||||||||| |||||| | ||||| |||||| | 
Sbjct: 853  accaacgtccagctcccaggaatgtacaacaaggaagagaacgcacgtgtccccatcatt 912

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
              ||| |||||||||||||| ||  | |||| |||||| |||| |||||| |||||||||
Sbjct: 913  tgcactggtaacgatttctccaccttatacggtcctctcatccttgatggacgtatggag 972

                                                          
Query: 191  aagttct--actgggctcccacccgtgacgaccgtatcggtgtctg 234
            |||||||  |||||   || |||||||| |||||||||||||||||
Sbjct: 973  aagttcttgactgg--cccgacccgtgaagaccgtatcggtgtctg 1016

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score =  125 bits (63), Expect = 2e-25
 Identities = 160/191 (83%), Gaps = 1/191 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  tacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
           |||||||||||||||| ||||||||| |||||||| |||||||| || ||   ||| || 
Sbjct: 773 tacaccgtcaacaaccagatggtgaatgccaccctcatgaacattgctgacaacccaaca 832

                                                                       
Query: 74  aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
           || || |||||||| || |||||||||||| | |||||| || | || |||||  | |||
Sbjct: 833 aatgtccagctccccggtatgtacaacaagcaagagaacgccagggtacccattattgtc 892

                                                                       
Query: 134 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
           || |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||||
Sbjct: 893 actggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaag 952

                      
Query: 194 ttctactgggc 204
           |||||||||||
Sbjct: 953 ttctactgggc 963

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 156/191 (81%), Gaps = 1/191 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  tacaccgtcaacaaccga-tggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
           ||||| |||||||||| | ||||||| ||||| || |||||||| || ||   ||| || 
Sbjct: 32  tacactgtcaacaaccaaatggtgaatgccactctcatgaacattgctgacaacccgaca 91

                                                                       
Query: 74  aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
           || || |||||||| || |||||||||||| | |||||  || | || || ||  |||||
Sbjct: 92  aatgtccagctccccggtatgtacaacaagcaagagaatgccagggtccctattatcgtc 151

                                                                       
Query: 134 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
           || |||||||||||||| ||  | || ||||| || ||||||||||||||||||||||||
Sbjct: 152 actggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatggagaag 211

                      
Query: 194 ttctactgggc 204
           |||||||||||
Sbjct: 212 ttctactgggc 222



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 278 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 327
           |||||||| || || | |||||| |||||||| || ||||||||||||||
Sbjct: 296 gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 156/191 (81%), Gaps = 1/191 (0%)
 Strand = Plus / Plus

                                                                       
Query: 15  tacaccgtcaacaaccga-tggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
           ||||| |||||||||| | ||||||| ||||| || |||||||| || ||   ||| || 
Sbjct: 792 tacactgtcaacaaccaaatggtgaatgccactctcatgaacattgctgacaacccgaca 851

                                                                       
Query: 74  aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
           || || |||||||| || |||||||||||| | |||||  || | || || ||  |||||
Sbjct: 852 aatgtccagctccccggtatgtacaacaagcaagagaatgccagggtccctattatcgtc 911

                                                                       
Query: 134 accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
           || |||||||||||||| ||  | || ||||| || ||||||||||||||||||||||||
Sbjct: 912 actggtaacgatttctccacattgtatgctccacttatccgtgatggtcgtatggagaag 971

                      
Query: 194 ttctactgggc 204
           |||||||||||
Sbjct: 972 ttctactgggc 982

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 67/74 (90%), Gaps = 1/74 (1%)
 Strand = Plus / Minus

                                                                          
Query: 12     cagtacaccgtcaacaaccga-tggtgaacgccaccctgatgaacatcgccgatgccccc 70
              |||||||||||||||| || | |||||| ||||||||||||||||||||||||   ||||
Sbjct: 445720 cagtacaccgtcaacacccaactggtgagcgccaccctgatgaacatcgccgacaacccc 445661

                            
Query: 71     accaacgtgcagct 84
              ||||||||||||||
Sbjct: 445660 accaacgtgcagct 445647

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 51/53 (96%), Gaps = 1/53 (1%)
 Strand = Plus / Plus

                                                                 
Query: 12   cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccga 63
            ||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1905 cagtacaccgtgaacaaccagatggtgaacgccaccctgatgaacatcgccga 1957



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 290  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 349
            ||||||||||| || || ||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 2721

              
Query: 350  ga 351
            ||
Sbjct: 2722 ga 2723

---

>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Plus

                                                                       
Query: 461 aagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcag 520
           |||||||||||||| ||  ||||||| |||||||||||||||||||| ||| | || || 
Sbjct: 3   aagctgctagagtatggaaacatgcttgtccaggagcaggacaatgtgaagagagttcaa 62

                                                                   
Query: 521 cttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgat 576
           || || ||||| ||| ||||||| |||||||| || ||||| ||| ||||| ||||
Sbjct: 63  ctggcagacacgtacttgagccaagcagctcttggagatgcaaacgaggattcgat 118

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 126/155 (81%)
 Strand = Plus / Plus

                                                                        
Query: 71   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
            ||||| |||||||| || |||||||| |||||||| || || ||| | || |||||| | 
Sbjct: 864  accaatgtgcagctaccaggcatgtataacaaggaagaaaatcccagagttcccatcata 923

                                                                        
Query: 131  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
            || || |||||||| ||||| ||| | || || ||||| || ||||||||||| ||||| 
Sbjct: 924  gtaactggtaacgacttctcaacgttatatgcacctctcattcgtgatggtcggatggat 983

                                               
Query: 191  aagttctactgggctcccacccgtgacgaccgtat 225
            || |||||||||||||| || ||||| || |||||
Sbjct: 984  aaattctactgggctccaactcgtgaagatcgtat 1018



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                        
Query: 287  gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 346
            |||||||||||||||||||| || || ||||| || |||||| || | ||||| || || 
Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctttgagagctcgagtttat 1139

                                  
Query: 347  gacgatgaggtgcgcaagtggg 368
            |||||||| ||| | |||||||
Sbjct: 1140 gacgatgaagtgagaaagtggg 1161

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 65/74 (87%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           ||||| |||||||||||||| ||  | || || ||||| |||||||||||||||||||||
Sbjct: 926 gtcactggtaacgatttctccacattgtatgcacctcttatccgtgatggtcgtatggag 985

                         
Query: 191 aagttctactgggc 204
           || |||||||||||
Sbjct: 986 aaattctactgggc 999



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 278  gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 331
            |||||||||||||| | |||||| |||||||| ||||| || ||||||||||||
Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgctctg 1126

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 154/192 (80%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  cagtacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgccccc 70
           |||||||| || ||||||| |||||| || |||||||| |||||||| || |||  ||| 
Sbjct: 487 cagtacactgtgaacaaccagatggtcaatgccaccctcatgaacattgctgataaccca 546

                                                                       
Query: 71  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 130
           || || || ||| | ||||| |||||||||||||| || || || ||||| || || || 
Sbjct: 547 acgaatgttcagttgcctggaatgtacaacaaggaagaaaatcctcgtgttccaattgtt 606

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           || || || || |||||||| ||  | || |||||  |||| |||||||| |||||||||
Sbjct: 607 gtgacaggaaatgatttctcaactttgtatgctccattgattcgtgatgggcgtatggag 666

                       
Query: 191 aagttctactgg 202
           ||||||||||||
Sbjct: 667 aagttctactgg 678

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 163/206 (79%), Gaps = 1/206 (0%)
 Strand = Plus / Minus

                                                                        
Query: 15   tacaccgtcaacaacc-gatggtgaacgccaccctgatgaacatcgccgatgcccccacc 73
            ||||| |||||||||| |||||| || || ||||| |||||||| || ||   ||| |||
Sbjct: 7097 tacacagtcaacaaccagatggtaaatgcaaccctcatgaacattgctgacaaccctacc 7038

                                                                        
Query: 74   aacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtc 133
            || || || || || || ||||||||||| || |||||  |||| || || ||| |||||
Sbjct: 7037 aatgttcaacttcccggtatgtacaacaaagaagagaatgcccgcgtccctatcatcgtc 6978

                                                                        
Query: 134  accggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaag 193
            || || || || ||||| ||| | || |||||| | || |||||||| |||||||| || 
Sbjct: 6977 actggcaatgacttctctacgttgtatgctcctttaattcgtgatggacgtatggaaaaa 6918

                                      
Query: 194  ttctactgggctcccacccgtgacga 219
            ||||||||||| || || ||||||||
Sbjct: 6917 ttctactgggcacctactcgtgacga 6892

---

>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete
           cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 191 aagttctactgg 202
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1299

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924

                       
Query: 191 aagttctactgg 202
           ||||||||||||
Sbjct: 925 aagttctactgg 936

---

>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 191 aagttctactgg 202
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1496

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932

                       
Query: 191 aagttctactgg 202
           ||||||||||||
Sbjct: 933 aagttctactgg 944

---

>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-D21
          Length = 1447

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945

                       
Query: 191 aagttctactgg 202
           ||||||||||||
Sbjct: 946 aagttctactgg 957

---

>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 131   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 190
             ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627

                         
Query: 191   aagttctactgg 202
             ||||||||||||
Sbjct: 97626 aagttctactgg 97615

---

>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 140 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 199
           ||||||||||| || || || ||||| ||||||||||| ||  | |||||||||||||||
Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995

              
Query: 200 tgg 202
           |||
Sbjct: 996 tgg 998

---

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 161    gctcctctgatccgtgatggtcgtatggagaagttctactgggc 204
              |||||||| || ||||| |||||||||||||| ||||| |||||
Sbjct: 103868 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 103825

---

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 161   gctcctctgatccgtgatggtcgtatggagaagttctactgggc 204
             |||||||| || ||||| |||||||||||||| ||||| |||||
Sbjct: 82893 gctcctcttattcgtgacggtcgtatggagaaattctattgggc 82850

---

>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 539   agccaggcagctctgggtgatg 560
             ||||||||||||||||||||||
Sbjct: 51254 agccaggcagctctgggtgatg 51275

---

>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 280  caagatcgtcgacaccttccc 300
            |||||||||||||||||||||
Sbjct: 3673 caagatcgtcgacaccttccc 3653

---

>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 593

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 131 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 189
           ||||| || ||||||||||| || || || |||| | ||||||||||| ||  | |||||
Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195

                        
Query: 190 gaagttctactgg 202
           |||||||||||||
Sbjct: 196 gaagttctactgg 208

---

>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence
          Length = 75381

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 618   acccaccatctcttgctgcat 638
             |||||||||||||||||||||
Sbjct: 63550 acccaccatctcttgctgcat 63530

---

>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence
          Length = 262

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 66/81 (81%)
 Strand = Plus / Plus

                                                                       
Query: 31  gatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctgg 90
           ||||||||| || ||||| |||||||| || |||   || || || || |||||||||||
Sbjct: 108 gatggtgaatgcaacccttatgaacattgctgataatccaactaatgttcagctccctgg 167

                                
Query: 91  catgtacaacaaggaggagaa 111
            |||||||||||  |||||||
Sbjct: 168 tatgtacaacaaacaggagaa 188

---

>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence
          Length = 98713

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 227   ggtgtctgcaagggtatcttccag 250
             |||||||||||||||||| |||||
Sbjct: 67265 ggtgtctgcaagggtatcatccag 67288

---

>gb|AC003067.59| Mus musculus Chromosome 16 BAC Clone tbx3 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 262062

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 634   tgcataggaggaggtaaagg 653
             ||||||||||||||||||||
Sbjct: 46378 tgcataggaggaggtaaagg 46359

---

>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 537  tgagccaggcagctctgggtgatg 560
            ||||||||||||||||||| ||||
Sbjct: 1565 tgagccaggcagctctgggcgatg 1542

---

>gb|AF414359.1|AF414356S4 Mus musculus thioredoxin reductase (Trxr2) gene, exons 12 through 18,
            and complete cds
          Length = 16432

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 634  tgcataggaggaggtaaagg 653
            ||||||||||||||||||||
Sbjct: 1656 tgcataggaggaggtaaagg 1637

---

>gb|AC133488.30| Mus musculus strain C57BL/6J clone rp23-432e14, complete sequence
          Length = 202128

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 634   tgcataggaggaggtaaagg 653
             ||||||||||||||||||||
Sbjct: 32964 tgcataggaggaggtaaagg 32945

---

>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 510 agcgtgtgcagcttgctgac 529
           ||||||||||||||||||||
Sbjct: 223 agcgtgtgcagcttgctgac 242

---

>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B
          Length = 1010

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 263 agtgacgagtctgtcgtcaa 282
           ||||||||||||||||||||
Sbjct: 308 agtgacgagtctgtcgtcaa 289

---

>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 537  tgagccaggcagctctgggtgatg 560
            ||||||||||||||||||| ||||
Sbjct: 1619 tgagccaggcagctctgggcgatg 1596

---

>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 491    caggagcaggacaatgtcaa 510
              ||||||||||||||||||||
Sbjct: 126419 caggagcaggacaatgtcaa 126438

---

>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 537  tgagccaggcagctctgggtgatg 560
            ||||||||||||||||||| ||||
Sbjct: 1935 tgagccaggcagctctgggcgatg 1912

---

>gb|AC003066.18| Mus musculus Chromosome 16 BAC Clone tbx1 Syntenic To Homo sapiens
             22q11.2 DGCR Region, complete sequence
          Length = 176974

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 634   tgcataggaggaggtaaagg 653
             ||||||||||||||||||||
Sbjct: 34681 tgcataggaggaggtaaagg 34662

---

>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 537  tgagccaggcagctctgggtgatg 560
            ||||||||||||||||||| ||||
Sbjct: 1659 tgagccaggcagctctgggcgatg 1636

---

>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 537  tgagccaggcagctctgggtgatg 560
            ||||||||||||||||||| ||||
Sbjct: 2026 tgagccaggcagctctgggcgatg 2003

---

>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 537  tgagccaggcagctctgggtgatg 560
            ||||||||||||||||||| ||||
Sbjct: 1935 tgagccaggcagctctgggcgatg 1912

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     cgtgacgaccgtatcggtgt 231
               ||||||||||||||||||||
Sbjct: 3056327 cgtgacgaccgtatcggtgt 3056308

---

>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2739

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   tgatgaacatcgccgatgcc 67
            ||||||||||||||||||||
Sbjct: 1896 tgatgaacatcgccgatgcc 1877

---

>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   tgatgaacatcgccgatgcc 67
            ||||||||||||||||||||
Sbjct: 1897 tgatgaacatcgccgatgcc 1878

---

>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 491    caggagcaggacaatgtcaa 510
              ||||||||||||||||||||
Sbjct: 106979 caggagcaggacaatgtcaa 106960

---

>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence
          Length = 42802

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    tgatgaacatcgccgatgcc 67
             ||||||||||||||||||||
Sbjct: 34318 tgatgaacatcgccgatgcc 34337

---

>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 537  tgagccaggcagctctgggtgatg 560
            ||||||||||||||||||| ||||
Sbjct: 1619 tgagccaggcagctctgggcgatg 1596

---

>ref|XM_222660.3| PREDICTED: Rattus norvegicus leiomodin 1 (smooth muscle)
           (predicted) (Lmod1_predicted), mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 641 gaggaggtaaaggagcacagcaag 664
           |||||||||||||||| |||||||
Sbjct: 625 gaggaggtaaaggagcccagcaag 648

---

>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence
          Length = 158595

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 634   tgcataggaggaggtaaagg 653
             ||||||||||||||||||||
Sbjct: 27736 tgcataggaggaggtaaagg 27755

---

>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA
            complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   tgatgaacatcgccgatgcc 67
            ||||||||||||||||||||
Sbjct: 1882 tgatgaacatcgccgatgcc 1863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,013,200
Number of Sequences: 3902068
Number of extensions: 4013200
Number of successful extensions: 76603
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76189
Number of HSP's gapped (non-prelim): 356
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---