ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal29j03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1B2_DAUCA (P37707) B2 protein 279 6e-75
2Y3536_METJA (Q60257) UPF0310 protein MJECL36 33 0.92
3H6ST3_MOUSE (Q9QYK4) Heparan-sulfate 6-O-sulfotransferase 3 (EC ... 32 1.2
4Y2356_ARCFU (O30314) UPF0310 protein AF2356 32 1.6
5Y875_PYRAB (Q9V0B5) UPF0310 protein PYRAB08750 31 2.7
6Y1033_PYRHO (O58764) UPF0310 protein PH1033 31 2.7
7SMR3A_HUMAN (Q99954) Submaxillary gland androgen-regulated prote... 30 7.8

>B2_DAUCA (P37707) B2 protein|
          Length = 207

 Score =  279 bits (713), Expect = 6e-75
 Identities = 132/158 (83%), Positives = 144/158 (91%)
 Frame = +3

Query: 120 GDNNHGAASEKRFKTLPASEALPRNEPIGGYIFVCNNDTMEENLKRQLFGLPSRYRDSVR 299
           G+N +G   EKRFKTLP +E+LPRNE +GGYIFVCNNDTM+ENLKRQLFGLP RYRDSVR
Sbjct: 49  GENKNGV--EKRFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVR 106

Query: 300 AIRPGLPLFLYNYSTHQLHGIFEAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKIC 479
           AI PGLPLFLYNYSTHQLHG+FEAASFGG NIDP AWEDKK  GESRFPAQVRV TRKIC
Sbjct: 107 AITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKIC 166

Query: 480 DPLEEDAFRPILHHYDGPKFRLELSITEALSLLDIFED 593
           +PLEED+FRPILHHYDGPKFRLEL+I EA+SLLDIFE+
Sbjct: 167 EPLEEDSFRPILHHYDGPKFRLELNIPEAISLLDIFEE 204



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>Y3536_METJA (Q60257) UPF0310 protein MJECL36|
          Length = 144

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 18/99 (18%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
 Frame = +3

Query: 210 YIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLY-------NYSTHQLHGIFE 368
           ++ + N D  +   +++++G+  RY++++  ++ G  L +Y       +Y    + G++E
Sbjct: 4   WLCITNEDNWKVIKEKKIWGVAERYKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYE 63

Query: 369 AASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICDP 485
             S    +     ++    N   +FP +V++   K+ +P
Sbjct: 64  VVSEVYKD-SSKIFKPTPRNPNEKFPYRVKLKEIKVFEP 101



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>H6ST3_MOUSE (Q9QYK4) Heparan-sulfate 6-O-sulfotransferase 3 (EC 2.8.2.-)|
           (HS6ST-3) (mHS6ST-3)
          Length = 470

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 20/44 (45%), Positives = 22/44 (50%)
 Frame = +2

Query: 446 CTGEGGHKEDLRPTGGGRIPPYPAPLRRAQVPARAQHHRGSLPP 577
           CT  G   E LR +G  R P  P+P RRAQ P      R  LPP
Sbjct: 34  CTNFG---EQLR-SGEARPPAVPSPARRAQAPLDEWERRPQLPP 73



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>Y2356_ARCFU (O30314) UPF0310 protein AF2356|
          Length = 147

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 22/111 (19%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
 Frame = +3

Query: 210 YIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLY--------NYSTHQLHGIF 365
           ++ + N D      ++ ++G+P R+++++  ++ G  L +Y             ++  ++
Sbjct: 4   WLCITNEDNWRVIKEKNIWGVPERHKNTIAKVKKGDKLLIYIKQENVNGEVKPSRIVAVY 63

Query: 366 EAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICD-PLEEDAFRPIL 515
           E AS    +     ++  K  G   FP ++++   KI D P+E   F+P++
Sbjct: 64  ETASEVYRD-SSRIFKSPKGMGNETFPLRIKLKPVKIFDRPIE---FKPLI 110



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>Y875_PYRAB (Q9V0B5) UPF0310 protein PYRAB08750|
          Length = 142

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
 Frame = +3

Query: 210 YIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLYNYSTHQLHGIFEAASFGGA 389
           ++ + N D  +   ++ ++G+P R+ ++++ ++PG  L  Y     +   + E    G  
Sbjct: 4   WLCITNRDNWKVVKEKNVWGVPRRHENTMKRVKPGDKLVFYVKQESRKGEVLEPMIVGIF 63

Query: 390 NIDPAAWEDKKCNGESRFPAQ---VRVATRKICDPLEEDAFRPIL 515
            +    + D     +S  P +   +RV  R I   + E  F+P++
Sbjct: 64  EVVSEPYSDSTKIFKSHTPGETYPIRVKIRPI--KIGEVKFKPLI 106



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>Y1033_PYRHO (O58764) UPF0310 protein PH1033|
          Length = 145

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 23/112 (20%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
 Frame = +3

Query: 210 YIFVCNNDTMEENLKRQLFGLPSRYRDSVRAIRPGLPLFLY---------NYSTHQLHGI 362
           +I + N +  E   +  ++G+P ++++++  ++PG  L +Y         N    ++ GI
Sbjct: 4   WICITNRENWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGI 63

Query: 363 FEAASFGGANIDPAAWEDKKCNGESRFPAQVRVATRKICDPLEEDAFRPILH 518
           +E  S     +D +        G+  +P +V++   KI     E  F+P+++
Sbjct: 64  YEVTS--EPYVDFSRIFKPHRGGKETYPYRVKIKPIKI----GEINFKPLIN 109



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>SMR3A_HUMAN (Q99954) Submaxillary gland androgen-regulated protein 3 homolog A|
           precursor (Proline-rich protein 5) (Proline-rich protein
           PBI)
          Length = 134

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 18/34 (52%), Positives = 18/34 (52%)
 Frame = +2

Query: 482 PTGGGRIPPYPAPLRRAQVPARAQHHRGSLPP*Y 583
           P G GRIPP P P      P R Q H  SLPP Y
Sbjct: 70  PYGPGRIPPSPPP---PYGPGRIQSH--SLPPPY 98


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,517,318
Number of Sequences: 219361
Number of extensions: 1155176
Number of successful extensions: 3865
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3862
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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