| Clone Name | baal29i24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1350 Score = 529 bits (267), Expect = e-147 Identities = 459/523 (87%) Strand = Plus / Plus Query: 107 atggagagggaaatgactgcctcatatgagccaaaactgaatagtgaaatacggattttt 166 |||||||||||||| |||||| |||||| |||||| || | ||||||| | |||||| Sbjct: 202 atggagagggaaatttctgccttatatgaaccaaaaagaaacaatgaaataagaattttt 261 Query: 167 gagagttcagatgagatagtaacagatctagctgagtatatctcccaagtttcagaaatc 226 ||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| Sbjct: 262 gagagttcagatgagatgtcaacagatctggctgagtatatctcgcaagtttcagaaata 321 Query: 227 tctgttaaagaaaggggatacttcgctattgcactgtctggagggccccttgtcagtttt 286 ||||| ||||||||||||||||| |||||||| || |||||||| ||||| ||||||||| Sbjct: 322 tctgtcaaagaaaggggatactttgctattgccctttctggaggtcccctagtcagtttt 381 Query: 287 ttggggaaactctgtgaagcgccatacaacaagacactggattggtctaaatggtacata 346 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 382 ttggggaaactttgtgaagcgccatacaacaagaccttggattggtctaaatggtacatc 441 Query: 347 ttctggtctgatgaacgtgctgtagcgaagaaccatgcagacagtaactataagttaaca 406 |||||||||||||| ||||||||||| ||||| |||||||| ||||| |||| | ||||| Sbjct: 442 ttctggtctgatgagcgtgctgtagcaaagaatcatgcagagagtaattataggataaca 501 Query: 407 aaagaaggatttctatcgaaggtacctattctgagtggccatgtctactccataaacgac 466 ||||||||||| || || |||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 502 aaagaaggattcctgtccaaggtacctattctcaatggccatgtctactctataaacgac 561 Query: 467 aacgccacggtggaggacgcagcgacggactacgaatttgacatcaggcagctggtcaag 526 ||||| ||||||||||| || || || || |||||||||| ||||||||||||||||||| Sbjct: 562 aacgcgacggtggaggatgccgcaacagattacgaatttgtcatcaggcagctggtcaag 621 Query: 527 gtccgcaccgtaggagtctcggagagcaccgactgccccaagtttgatctcatcctcctt 586 |||||||| | |||||||| || |||| ||| ||||||||||| ||||| ||||| || Sbjct: 622 gtccgcactattggagtctccgaaagcaacgattgccccaagttcgatctaatcctgctc 681 Query: 587 ggcatgggctccgacgggcatgtggcctcattgttccccaacc 629 ||||||| || || || |||||||| |||||||||||||||| Sbjct: 682 agcatgggttctgatggacatgtggcttcattgttccccaacc 724
>dbj|AK070405.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052F08, full insert sequence Length = 1350 Score = 529 bits (267), Expect = e-147 Identities = 459/523 (87%) Strand = Plus / Plus Query: 107 atggagagggaaatgactgcctcatatgagccaaaactgaatagtgaaatacggattttt 166 |||||||||||||| |||||| |||||| |||||| || | ||||||| | |||||| Sbjct: 202 atggagagggaaatttctgccttatatgaaccaaaaagaaacaatgaaataagaattttt 261 Query: 167 gagagttcagatgagatagtaacagatctagctgagtatatctcccaagtttcagaaatc 226 ||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| Sbjct: 262 gagagttcagatgagatgtcaacagatctggctgagtatatctcgcaagtttcagaaata 321 Query: 227 tctgttaaagaaaggggatacttcgctattgcactgtctggagggccccttgtcagtttt 286 ||||| ||||||||||||||||| |||||||| || |||||||| ||||| ||||||||| Sbjct: 322 tctgtcaaagaaaggggatactttgctattgccctttctggaggtcccctagtcagtttt 381 Query: 287 ttggggaaactctgtgaagcgccatacaacaagacactggattggtctaaatggtacata 346 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 382 ttggggaaactttgtgaagcgccatacaacaagaccttggattggtctaaatggtacatc 441 Query: 347 ttctggtctgatgaacgtgctgtagcgaagaaccatgcagacagtaactataagttaaca 406 |||||||||||||| ||||||||||| ||||| |||||||| ||||| |||| | ||||| Sbjct: 442 ttctggtctgatgagcgtgctgtagcaaagaatcatgcagagagtaattataggataaca 501 Query: 407 aaagaaggatttctatcgaaggtacctattctgagtggccatgtctactccataaacgac 466 ||||||||||| || || |||||||||||||| | ||||||||||||||| ||||||||| Sbjct: 502 aaagaaggattcctgtccaaggtacctattctcaatggccatgtctactctataaacgac 561 Query: 467 aacgccacggtggaggacgcagcgacggactacgaatttgacatcaggcagctggtcaag 526 ||||| ||||||||||| || || || || |||||||||| ||||||||||||||||||| Sbjct: 562 aacgcgacggtggaggatgccgcaacagattacgaatttgtcatcaggcagctggtcaag 621 Query: 527 gtccgcaccgtaggagtctcggagagcaccgactgccccaagtttgatctcatcctcctt 586 |||||||| | |||||||| || |||| ||| ||||||||||| ||||| ||||| || Sbjct: 622 gtccgcactattggagtctccgaaagcaacgattgccccaagttcgatctaatcctgctc 681 Query: 587 ggcatgggctccgacgggcatgtggcctcattgttccccaacc 629 ||||||| || || || |||||||| |||||||||||||||| Sbjct: 682 agcatgggttctgatggacatgtggcttcattgttccccaacc 724
>gb|AY104623.1| Zea mays PCO143240 mRNA sequence Length = 1360 Score = 486 bits (245), Expect = e-134 Identities = 431/493 (87%) Strand = Plus / Plus Query: 123 ctgcctcatatgagccaaaactgaatagtgaaatacggatttttgagagttcagatgaga 182 ||||| |||| ||||||||| ||| ||||||||| || ||||||||||||||||||||| Sbjct: 222 ctgccacatacgagccaaaaaggaacagtgaaataagggtttttgagagttcagatgaga 281 Query: 183 tagtaacagatctagctgagtatatctcccaagtttcagaaatctctgttaaagaaaggg 242 | ||| ||||| |||||||||||||| |||||||||||||| ||||| |||||||||| Sbjct: 282 tttcaacggatcttgctgagtatatctcacaagtttcagaaatttctgtcaaagaaaggg 341 Query: 243 gatacttcgctattgcactgtctggagggccccttgtcagttttttggggaaactctgtg 302 ||||||| || || || | |||||||| ||||| |||||||||||||||||||| |||| Sbjct: 342 gatactttgccatcgccttatctggaggtcccctagtcagttttttggggaaactttgtg 401 Query: 303 aagcgccatacaacaagacactggattggtctaaatggtacatattctggtctgatgaac 362 |||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 402 aagctccatacaacaagacactggattggtccaaatggtacatcttctggtctgatgaac 461 Query: 363 gtgctgtagcgaagaaccatgcagacagtaactataagttaacaaaagaaggatttctat 422 ||||||| || || ||||||||||| |||||||||| |||||||||||||||||| || Sbjct: 462 gtgctgtggcaaaaaaccatgcagagagtaactataggttaacaaaagaaggattcctcg 521 Query: 423 cgaaggtacctattctgagtggccatgtctactccataaacgacaacgccacggtggagg 482 | |||||||| ||||||| ||||||||||||||||||||| ||||| ||||| ||||||| Sbjct: 522 ccaaggtaccgattctgaatggccatgtctactccataaatgacaatgccacagtggagg 581 Query: 483 acgcagcgacggactacgaatttgacatcaggcagctggtcaaggtccgcaccgtaggag 542 | ||||| || ||||| ||||| |||||||||||||| ||||||||||| |||||| Sbjct: 582 atgcagcaacagactatgaattcatgatcaggcagctggttaaggtccgcacaataggag 641 Query: 543 tctcggagagcaccgactgccccaagtttgatctcatcctccttggcatgggctccgacg 602 |||| ||||| | |||||| |||||||| ||||||||||| || |||||||||||| | Sbjct: 642 tctcagagagaaacgactgtcccaagttcgatctcatccttctcaccatgggctccgatg 701 Query: 603 ggcatgtggcctc 615 ||||||||||||| Sbjct: 702 ggcatgtggcctc 714
>ref|XM_506916.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0059G13.23 mRNA Length = 2926 Score = 410 bits (207), Expect = e-111 Identities = 447/527 (84%) Strand = Plus / Plus Query: 103 aacaatggagagggaaatgactgcctcatatgagccaaaactgaatagtgaaatacggat 162 |||||||||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 1909 aacaatggagagggaaattgtggcctcatatgaacccaagaagaataacgaaatcaggat 1968 Query: 163 ttttgagagttcagatgagatagtaacagatctagctgagtatatctcccaagtttcaga 222 |||||||||||||| ||||| | ||||||||| ||||||||||| || ||||||||||| Sbjct: 1969 gtttgagagttcagacgagatggcaacagatctggctgagtatatttcacaagtttcaga 2028 Query: 223 aatctctgttaaagaaaggggatacttcgctattgcactgtctggagggccccttgtcag 282 ||| ||| |||| ||||| || ||||| |||||||| |||||||||||||| ||| |||| Sbjct: 2029 aatttctattaaggaaagaggttactttgctattgccctgtctggagggcctcttatcag 2088 Query: 283 ttttttggggaaactctgtgaagcgccatacaacaagacactggattggtctaaatggta 342 |||| || ||||||| |||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 2089 ttttatgcggaaactttgtgaagcaccatacaacaaaaccctggattggtctaaatggta 2148 Query: 343 catattctggtctgatgaacgtgctgtagcgaagaaccatgcagacagtaactataagtt 402 ||| |||||| ||||||||||||| || || |||||||||| || || ||||||| | Sbjct: 2149 catcttctgggctgatgaacgtgcggtggctaagaaccatgtggatagctactataaatc 2208 Query: 403 aacaaaagaaggatttctatcgaaggtacctattctgagtggccatgtctactccataaa 462 ||||||||||| ||||| || ||||| |||||||| | ||| || ||||||||||| || Sbjct: 2209 aacaaaagaagattttctctccaaggtgcctattcttaatggtcacgtctactccatcaa 2268 Query: 463 cgacaacgccacggtggaggacgcagcgacggactacgaatttgacatcaggcagctggt 522 ||||| | ||||||||||| |||||||||||||||||||| | |||| | |||||||| Sbjct: 2269 tgacaatgtgacggtggaggatgcagcgacggactacgaattcgtcatccgtcagctggt 2328 Query: 523 caaggtccgcaccgtaggagtctcggagagcaccgactgccccaagtttgatctcatcct 582 |||| | ||||| || ||||| || ||||||| ||||||||||||||||||||| ||||| Sbjct: 2329 caagattcgcacagtcggagtttcagagagcaacgactgccccaagtttgatctgatcct 2388 Query: 583 ccttggcatgggctccgacgggcatgtggcctcattgttccccaacc 629 |||| |||| ||||| || || ||||| ||||||||||||||||||| Sbjct: 2389 ccttagcatcggctctgatggtcatgtagcctcattgttccccaacc 2435
>ref|XM_468698.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1349 Score = 410 bits (207), Expect = e-111 Identities = 447/527 (84%) Strand = Plus / Plus Query: 103 aacaatggagagggaaatgactgcctcatatgagccaaaactgaatagtgaaatacggat 162 |||||||||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 229 aacaatggagagggaaattgtggcctcatatgaacccaagaagaataacgaaatcaggat 288 Query: 163 ttttgagagttcagatgagatagtaacagatctagctgagtatatctcccaagtttcaga 222 |||||||||||||| ||||| | ||||||||| ||||||||||| || ||||||||||| Sbjct: 289 gtttgagagttcagacgagatggcaacagatctggctgagtatatttcacaagtttcaga 348 Query: 223 aatctctgttaaagaaaggggatacttcgctattgcactgtctggagggccccttgtcag 282 ||| ||| |||| ||||| || ||||| |||||||| |||||||||||||| ||| |||| Sbjct: 349 aatttctattaaggaaagaggttactttgctattgccctgtctggagggcctcttatcag 408 Query: 283 ttttttggggaaactctgtgaagcgccatacaacaagacactggattggtctaaatggta 342 |||| || ||||||| |||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 409 ttttatgcggaaactttgtgaagcaccatacaacaaaaccctggattggtctaaatggta 468 Query: 343 catattctggtctgatgaacgtgctgtagcgaagaaccatgcagacagtaactataagtt 402 ||| |||||| ||||||||||||| || || |||||||||| || || ||||||| | Sbjct: 469 catcttctgggctgatgaacgtgcggtggctaagaaccatgtggatagctactataaatc 528 Query: 403 aacaaaagaaggatttctatcgaaggtacctattctgagtggccatgtctactccataaa 462 ||||||||||| ||||| || ||||| |||||||| | ||| || ||||||||||| || Sbjct: 529 aacaaaagaagattttctctccaaggtgcctattcttaatggtcacgtctactccatcaa 588 Query: 463 cgacaacgccacggtggaggacgcagcgacggactacgaatttgacatcaggcagctggt 522 ||||| | ||||||||||| |||||||||||||||||||| | |||| | |||||||| Sbjct: 589 tgacaatgtgacggtggaggatgcagcgacggactacgaattcgtcatccgtcagctggt 648 Query: 523 caaggtccgcaccgtaggagtctcggagagcaccgactgccccaagtttgatctcatcct 582 |||| | ||||| || ||||| || ||||||| ||||||||||||||||||||| ||||| Sbjct: 649 caagattcgcacagtcggagtttcagagagcaacgactgccccaagtttgatctgatcct 708 Query: 583 ccttggcatgggctccgacgggcatgtggcctcattgttccccaacc 629 |||| |||| ||||| || || ||||| ||||||||||||||||||| Sbjct: 709 ccttagcatcggctctgatggtcatgtagcctcattgttccccaacc 755
>dbj|AK103024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117B06, full insert sequence Length = 1349 Score = 410 bits (207), Expect = e-111 Identities = 447/527 (84%) Strand = Plus / Plus Query: 103 aacaatggagagggaaatgactgcctcatatgagccaaaactgaatagtgaaatacggat 162 |||||||||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 229 aacaatggagagggaaattgtggcctcatatgaacccaagaagaataacgaaatcaggat 288 Query: 163 ttttgagagttcagatgagatagtaacagatctagctgagtatatctcccaagtttcaga 222 |||||||||||||| ||||| | ||||||||| ||||||||||| || ||||||||||| Sbjct: 289 gtttgagagttcagacgagatggcaacagatctggctgagtatatttcacaagtttcaga 348 Query: 223 aatctctgttaaagaaaggggatacttcgctattgcactgtctggagggccccttgtcag 282 ||| ||| |||| ||||| || ||||| |||||||| |||||||||||||| ||| |||| Sbjct: 349 aatttctattaaggaaagaggttactttgctattgccctgtctggagggcctcttatcag 408 Query: 283 ttttttggggaaactctgtgaagcgccatacaacaagacactggattggtctaaatggta 342 |||| || ||||||| |||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 409 ttttatgcggaaactttgtgaagcaccatacaacaaaaccctggattggtctaaatggta 468 Query: 343 catattctggtctgatgaacgtgctgtagcgaagaaccatgcagacagtaactataagtt 402 ||| |||||| ||||||||||||| || || |||||||||| || || ||||||| | Sbjct: 469 catcttctgggctgatgaacgtgcggtggctaagaaccatgtggatagctactataaatc 528 Query: 403 aacaaaagaaggatttctatcgaaggtacctattctgagtggccatgtctactccataaa 462 ||||||||||| ||||| || ||||| |||||||| | ||| || ||||||||||| || Sbjct: 529 aacaaaagaagattttctctccaaggtgcctattcttaatggtcacgtctactccatcaa 588 Query: 463 cgacaacgccacggtggaggacgcagcgacggactacgaatttgacatcaggcagctggt 522 ||||| | ||||||||||| |||||||||||||||||||| | |||| | |||||||| Sbjct: 589 tgacaatgtgacggtggaggatgcagcgacggactacgaattcgtcatccgtcagctggt 648 Query: 523 caaggtccgcaccgtaggagtctcggagagcaccgactgccccaagtttgatctcatcct 582 |||| | ||||| || ||||| || ||||||| ||||||||||||||||||||| ||||| Sbjct: 649 caagattcgcacagtcggagtttcagagagcaacgactgccccaagtttgatctgatcct 708 Query: 583 ccttggcatgggctccgacgggcatgtggcctcattgttccccaacc 629 |||| |||| ||||| || || ||||| ||||||||||||||||||| Sbjct: 709 ccttagcatcggctctgatggtcatgtagcctcattgttccccaacc 755
>dbj|AK073878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072G18, full insert sequence Length = 2924 Score = 410 bits (207), Expect = e-111 Identities = 447/527 (84%) Strand = Plus / Plus Query: 103 aacaatggagagggaaatgactgcctcatatgagccaaaactgaatagtgaaatacggat 162 |||||||||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 1907 aacaatggagagggaaattgtggcctcatatgaacccaagaagaataacgaaatcaggat 1966 Query: 163 ttttgagagttcagatgagatagtaacagatctagctgagtatatctcccaagtttcaga 222 |||||||||||||| ||||| | ||||||||| ||||||||||| || ||||||||||| Sbjct: 1967 gtttgagagttcagacgagatggcaacagatctggctgagtatatttcacaagtttcaga 2026 Query: 223 aatctctgttaaagaaaggggatacttcgctattgcactgtctggagggccccttgtcag 282 ||| ||| |||| ||||| || ||||| |||||||| |||||||||||||| ||| |||| Sbjct: 2027 aatttctattaaggaaagaggttactttgctattgccctgtctggagggcctcttatcag 2086 Query: 283 ttttttggggaaactctgtgaagcgccatacaacaagacactggattggtctaaatggta 342 |||| || ||||||| |||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 2087 ttttatgcggaaactttgtgaagcaccatacaacaaaaccctggattggtctaaatggta 2146 Query: 343 catattctggtctgatgaacgtgctgtagcgaagaaccatgcagacagtaactataagtt 402 ||| |||||| ||||||||||||| || || |||||||||| || || ||||||| | Sbjct: 2147 catcttctgggctgatgaacgtgcggtggctaagaaccatgtggatagctactataaatc 2206 Query: 403 aacaaaagaaggatttctatcgaaggtacctattctgagtggccatgtctactccataaa 462 ||||||||||| ||||| || ||||| |||||||| | ||| || ||||||||||| || Sbjct: 2207 aacaaaagaagattttctctccaaggtgcctattcttaatggtcacgtctactccatcaa 2266 Query: 463 cgacaacgccacggtggaggacgcagcgacggactacgaatttgacatcaggcagctggt 522 ||||| | ||||||||||| |||||||||||||||||||| | |||| | |||||||| Sbjct: 2267 tgacaatgtgacggtggaggatgcagcgacggactacgaattcgtcatccgtcagctggt 2326 Query: 523 caaggtccgcaccgtaggagtctcggagagcaccgactgccccaagtttgatctcatcct 582 |||| | ||||| || ||||| || ||||||| ||||||||||||||||||||| ||||| Sbjct: 2327 caagattcgcacagtcggagtttcagagagcaacgactgccccaagtttgatctgatcct 2386 Query: 583 ccttggcatgggctccgacgggcatgtggcctcattgttccccaacc 629 |||| |||| ||||| || || ||||| ||||||||||||||||||| Sbjct: 2387 ccttagcatcggctctgatggtcatgtagcctcattgttccccaacc 2433
>dbj|AK059691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-B03, full insert sequence Length = 950 Score = 317 bits (160), Expect = 2e-83 Identities = 280/320 (87%) Strand = Plus / Plus Query: 310 atacaacaagacactggattggtctaaatggtacatattctggtctgatgaacgtgctgt 369 |||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 1 atacaacaagaccttggattggtctaaatggtacatcttctggtctgatgagcgtgctgt 60 Query: 370 agcgaagaaccatgcagacagtaactataagttaacaaaagaaggatttctatcgaaggt 429 ||| ||||| |||||||| ||||| |||| | |||||||||||||||| || || ||||| Sbjct: 61 agcaaagaatcatgcagagagtaattataggataacaaaagaaggattcctgtccaaggt 120 Query: 430 acctattctgagtggccatgtctactccataaacgacaacgccacggtggaggacgcagc 489 ||||||||| | ||||||||||||||| |||||||||||||| ||||||||||| || || Sbjct: 121 acctattctcaatggccatgtctactctataaacgacaacgcgacggtggaggatgccgc 180 Query: 490 gacggactacgaatttgacatcaggcagctggtcaaggtccgcaccgtaggagtctcgga 549 || || |||||||||| ||||||||||||||||||||||||||| | |||||||| || Sbjct: 181 aacagattacgaatttgtcatcaggcagctggtcaaggtccgcactattggagtctccga 240 Query: 550 gagcaccgactgccccaagtttgatctcatcctccttggcatgggctccgacgggcatgt 609 |||| ||| ||||||||||| ||||| ||||| || ||||||| || || || ||||| Sbjct: 241 aagcaacgattgccccaagttcgatctaatcctgctcagcatgggttctgatggacatgt 300 Query: 610 ggcctcattgttccccaacc 629 ||| |||||||||||||||| Sbjct: 301 ggcttcattgttccccaacc 320
>gb|AY107256.1| Zea mays PCO118908 mRNA sequence Length = 1212 Score = 283 bits (143), Expect = 3e-73 Identities = 338/403 (83%) Strand = Plus / Plus Query: 164 tttgagagttcagatgagatagtaacagatctagctgagtatatctcccaagtttcagaa 223 |||||||||||||| ||||| | ||||||||| || |||| ||| || |||| ||||||| Sbjct: 218 tttgagagttcagacgagatggcaacagatctggcagagtttatttcacaagcttcagaa 277 Query: 224 atctctgttaaagaaaggggatacttcgctattgcactgtctggagggccccttgtcagt 283 || || ||||| ||||| |||| ||| |||||||| || |||||||| || ||||| || Sbjct: 278 atttcagttaaggaaagaggatgctttgctattgccctttctggaggtcctcttgttaga 337 Query: 284 tttttggggaaactctgtgaagcgccatacaacaagacactggattggtctaaatggtac 343 | || |||| ||||||||||| |||||||||||||| || |||||||||||||||||| Sbjct: 338 catatgcggaagctctgtgaagcaccatacaacaagacccttgattggtctaaatggtac 397 Query: 344 atattctggtctgatgaacgtgctgtagcgaagaaccatgcagacagtaactataagtta 403 || |||||| |||| |||||||| || || |||||||||||||| |||||||| || ||| Sbjct: 398 atcttctgggctgaagaacgtgcagttgcaaagaaccatgcagagagtaactacaaatta 457 Query: 404 acaaaagaaggatttctatcgaaggtacctattctgagtggccatgtctactccataaac 463 ||||| |||| |||||| || ||||| ||||| || | ||||| ||||||||||| ||| Sbjct: 458 acaaaggaagaatttctctccaaggtgcctatccttaacggccacgtctactccatcaac 517 Query: 464 gacaacgccacggtggaggacgcagcgacggactacgaatttgacatcaggcagctggtc 523 |||||||| |||||||| || ||||||| |||||||| || | || |||||||||| Sbjct: 518 gacaacgcgacggtggaagaggcagcgagcgactacgagttcgtgatgcggcagctggtg 577 Query: 524 aaggtccgcaccgtaggagtctcggagagcaccgactgcccca 566 |||||||| || || |||||||||||||||| ||||||||||| Sbjct: 578 aaggtccggacggtgggagtctcggagagcaacgactgcccca 620
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 190 bits (96), Expect = 4e-45 Identities = 177/204 (86%) Strand = Plus / Plus Query: 426 aggtacctattctgagtggccatgtctactccataaacgacaacgccacggtggaggacg 485 ||||||||||||| | ||||||||||||||| |||||||||||||| ||||||||||| | Sbjct: 24687635 aggtacctattctcaatggccatgtctactctataaacgacaacgcgacggtggaggatg 24687694 Query: 486 cagcgacggactacgaatttgacatcaggcagctggtcaaggtccgcaccgtaggagtct 545 | || || || |||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 24687695 ccgcaacagattacgaatttgtcatcaggcagctggtcaaggtccgcactattggagtct 24687754 Query: 546 cggagagcaccgactgccccaagtttgatctcatcctccttggcatgggctccgacgggc 605 | || |||| ||| ||||||||||| ||||| ||||| || ||||||| || || || | Sbjct: 24687755 ccgaaagcaacgattgccccaagttcgatctaatcctgctcagcatgggttctgatggac 24687814 Query: 606 atgtggcctcattgttccccaacc 629 ||||||| |||||||||||||||| Sbjct: 24687815 atgtggcttcattgttccccaacc 24687838 Score = 186 bits (94), Expect = 6e-44 Identities = 163/186 (87%) Strand = Plus / Plus Query: 107 atggagagggaaatgactgcctcatatgagccaaaactgaatagtgaaatacggattttt 166 |||||||||||||| |||||| |||||| |||||| || | ||||||| | |||||| Sbjct: 24685623 atggagagggaaatttctgccttatatgaaccaaaaagaaacaatgaaataagaattttt 24685682 Query: 167 gagagttcagatgagatagtaacagatctagctgagtatatctcccaagtttcagaaatc 226 ||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| Sbjct: 24685683 gagagttcagatgagatgtcaacagatctggctgagtatatctcgcaagtttcagaaata 24685742 Query: 227 tctgttaaagaaaggggatacttcgctattgcactgtctggagggccccttgtcagtttt 286 ||||| ||||||||||||||||| |||||||| || |||||||| ||||| ||||||||| Sbjct: 24685743 tctgtcaaagaaaggggatactttgctattgccctttctggaggtcccctagtcagtttt 24685802 Query: 287 ttgggg 292 |||||| Sbjct: 24685803 ttgggg 24685808 Score = 167 bits (84), Expect = 6e-38 Identities = 126/140 (90%) Strand = Plus / Plus Query: 291 ggaaactctgtgaagcgccatacaacaagacactggattggtctaaatggtacatattct 350 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 24685913 ggaaactttgtgaagcgccatacaacaagaccttggattggtctaaatggtacatcttct 24685972 Query: 351 ggtctgatgaacgtgctgtagcgaagaaccatgcagacagtaactataagttaacaaaag 410 |||||||||| ||||||||||| ||||| |||||||| ||||| |||| | ||||||||| Sbjct: 24685973 ggtctgatgagcgtgctgtagcaaagaatcatgcagagagtaattataggataacaaaag 24686032 Query: 411 aaggatttctatcgaaggta 430 ||||||| || || |||||| Sbjct: 24686033 aaggattcctgtccaaggta 24686052
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 190 bits (96), Expect = 4e-45 Identities = 177/204 (86%) Strand = Plus / Plus Query: 426 aggtacctattctgagtggccatgtctactccataaacgacaacgccacggtggaggacg 485 ||||||||||||| | ||||||||||||||| |||||||||||||| ||||||||||| | Sbjct: 43572 aggtacctattctcaatggccatgtctactctataaacgacaacgcgacggtggaggatg 43631 Query: 486 cagcgacggactacgaatttgacatcaggcagctggtcaaggtccgcaccgtaggagtct 545 | || || || |||||||||| ||||||||||||||||||||||||||| | ||||||| Sbjct: 43632 ccgcaacagattacgaatttgtcatcaggcagctggtcaaggtccgcactattggagtct 43691 Query: 546 cggagagcaccgactgccccaagtttgatctcatcctccttggcatgggctccgacgggc 605 | || |||| ||| ||||||||||| ||||| ||||| || ||||||| || || || | Sbjct: 43692 ccgaaagcaacgattgccccaagttcgatctaatcctgctcagcatgggttctgatggac 43751 Query: 606 atgtggcctcattgttccccaacc 629 ||||||| |||||||||||||||| Sbjct: 43752 atgtggcttcattgttccccaacc 43775 Score = 186 bits (94), Expect = 6e-44 Identities = 163/186 (87%) Strand = Plus / Plus Query: 107 atggagagggaaatgactgcctcatatgagccaaaactgaatagtgaaatacggattttt 166 |||||||||||||| |||||| |||||| |||||| || | ||||||| | |||||| Sbjct: 41560 atggagagggaaatttctgccttatatgaaccaaaaagaaacaatgaaataagaattttt 41619 Query: 167 gagagttcagatgagatagtaacagatctagctgagtatatctcccaagtttcagaaatc 226 ||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||| Sbjct: 41620 gagagttcagatgagatgtcaacagatctggctgagtatatctcgcaagtttcagaaata 41679 Query: 227 tctgttaaagaaaggggatacttcgctattgcactgtctggagggccccttgtcagtttt 286 ||||| ||||||||||||||||| |||||||| || |||||||| ||||| ||||||||| Sbjct: 41680 tctgtcaaagaaaggggatactttgctattgccctttctggaggtcccctagtcagtttt 41739 Query: 287 ttgggg 292 |||||| Sbjct: 41740 ttgggg 41745 Score = 167 bits (84), Expect = 6e-38 Identities = 126/140 (90%) Strand = Plus / Plus Query: 291 ggaaactctgtgaagcgccatacaacaagacactggattggtctaaatggtacatattct 350 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||| |||| Sbjct: 41850 ggaaactttgtgaagcgccatacaacaagaccttggattggtctaaatggtacatcttct 41909 Query: 351 ggtctgatgaacgtgctgtagcgaagaaccatgcagacagtaactataagttaacaaaag 410 |||||||||| ||||||||||| ||||| |||||||| ||||| |||| | ||||||||| Sbjct: 41910 ggtctgatgagcgtgctgtagcaaagaatcatgcagagagtaattataggataacaaaag 41969 Query: 411 aaggatttctatcgaaggta 430 ||||||| || || |||||| Sbjct: 41970 aaggattcctgtccaaggta 41989
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 174 bits (88), Expect = 2e-40 Identities = 175/204 (85%) Strand = Plus / Minus Query: 426 aggtacctattctgagtggccatgtctactccataaacgacaacgccacggtggaggacg 485 |||| |||||||| | ||| || ||||||||||| || ||||| | ||||||||||| | Sbjct: 17101132 aggtgcctattcttaatggtcacgtctactccatcaatgacaatgtgacggtggaggatg 17101073 Query: 486 cagcgacggactacgaatttgacatcaggcagctggtcaaggtccgcaccgtaggagtct 545 ||||||||||||||||||| | |||| | |||||||||||| | ||||| || ||||| | Sbjct: 17101072 cagcgacggactacgaattcgtcatccgtcagctggtcaagattcgcacagtcggagttt 17101013 Query: 546 cggagagcaccgactgccccaagtttgatctcatcctccttggcatgggctccgacgggc 605 | ||||||| ||||||||||||||||||||| ||||||||| |||| ||||| || || | Sbjct: 17101012 cagagagcaacgactgccccaagtttgatctgatcctccttagcatcggctctgatggtc 17100953 Query: 606 atgtggcctcattgttccccaacc 629 |||| ||||||||||||||||||| Sbjct: 17100952 atgtagcctcattgttccccaacc 17100929 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Minus Query: 103 aacaatggagagggaaatgactgcctcatatgagccaaaactgaatagtgaaatacggat 162 |||||||||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 17102700 aacaatggagagggaaattgtggcctcatatgaacccaagaagaataacgaaatcaggat 17102641 Query: 163 ttttgagagttcagatgagatagtaacagatctagctgagtatatctcccaagtttcaga 222 |||||||||||||| ||||| | ||||||||| ||||||||||| || ||||||||||| Sbjct: 17102640 gtttgagagttcagacgagatggcaacagatctggctgagtatatttcacaagtttcaga 17102581 Query: 223 aatctctgttaaagaaaggggatacttcgctattgcactgtctggagggccccttgtcag 282 ||| ||| |||| ||||| || ||||| |||||||| |||||||||||||| ||| |||| Sbjct: 17102580 aatttctattaaggaaagaggttactttgctattgccctgtctggagggcctcttatcag 17102521 Query: 283 tttt 286 |||| Sbjct: 17102520 tttt 17102517 Score = 119 bits (60), Expect = 1e-23 Identities = 120/140 (85%) Strand = Plus / Minus Query: 291 ggaaactctgtgaagcgccatacaacaagacactggattggtctaaatggtacatattct 350 ||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| |||| Sbjct: 17102404 ggaaactttgtgaagcaccatacaacaaaaccctggattggtctaaatggtacatcttct 17102345 Query: 351 ggtctgatgaacgtgctgtagcgaagaaccatgcagacagtaactataagttaacaaaag 410 || ||||||||||||| || || |||||||||| || || ||||||| | |||||||| Sbjct: 17102344 gggctgatgaacgtgcggtggctaagaaccatgtggatagctactataaatcaacaaaag 17102285 Query: 411 aaggatttctatcgaaggta 430 ||| ||||| || |||||| Sbjct: 17102284 aagattttctctccaaggta 17102265
>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete sequence Length = 157662 Score = 174 bits (88), Expect = 2e-40 Identities = 175/204 (85%) Strand = Plus / Minus Query: 426 aggtacctattctgagtggccatgtctactccataaacgacaacgccacggtggaggacg 485 |||| |||||||| | ||| || ||||||||||| || ||||| | ||||||||||| | Sbjct: 131878 aggtgcctattcttaatggtcacgtctactccatcaatgacaatgtgacggtggaggatg 131819 Query: 486 cagcgacggactacgaatttgacatcaggcagctggtcaaggtccgcaccgtaggagtct 545 ||||||||||||||||||| | |||| | |||||||||||| | ||||| || ||||| | Sbjct: 131818 cagcgacggactacgaattcgtcatccgtcagctggtcaagattcgcacagtcggagttt 131759 Query: 546 cggagagcaccgactgccccaagtttgatctcatcctccttggcatgggctccgacgggc 605 | ||||||| ||||||||||||||||||||| ||||||||| |||| ||||| || || | Sbjct: 131758 cagagagcaacgactgccccaagtttgatctgatcctccttagcatcggctctgatggtc 131699 Query: 606 atgtggcctcattgttccccaacc 629 |||| ||||||||||||||||||| Sbjct: 131698 atgtagcctcattgttccccaacc 131675 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Minus Query: 103 aacaatggagagggaaatgactgcctcatatgagccaaaactgaatagtgaaatacggat 162 |||||||||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 133446 aacaatggagagggaaattgtggcctcatatgaacccaagaagaataacgaaatcaggat 133387 Query: 163 ttttgagagttcagatgagatagtaacagatctagctgagtatatctcccaagtttcaga 222 |||||||||||||| ||||| | ||||||||| ||||||||||| || ||||||||||| Sbjct: 133386 gtttgagagttcagacgagatggcaacagatctggctgagtatatttcacaagtttcaga 133327 Query: 223 aatctctgttaaagaaaggggatacttcgctattgcactgtctggagggccccttgtcag 282 ||| ||| |||| ||||| || ||||| |||||||| |||||||||||||| ||| |||| Sbjct: 133326 aatttctattaaggaaagaggttactttgctattgccctgtctggagggcctcttatcag 133267 Query: 283 tttt 286 |||| Sbjct: 133266 tttt 133263 Score = 119 bits (60), Expect = 1e-23 Identities = 120/140 (85%) Strand = Plus / Minus Query: 291 ggaaactctgtgaagcgccatacaacaagacactggattggtctaaatggtacatattct 350 ||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| |||| Sbjct: 133150 ggaaactttgtgaagcaccatacaacaaaaccctggattggtctaaatggtacatcttct 133091 Query: 351 ggtctgatgaacgtgctgtagcgaagaaccatgcagacagtaactataagttaacaaaag 410 || ||||||||||||| || || |||||||||| || || ||||||| | |||||||| Sbjct: 133090 gggctgatgaacgtgcggtggctaagaaccatgtggatagctactataaatcaacaaaag 133031 Query: 411 aaggatttctatcgaaggta 430 ||| ||||| || |||||| Sbjct: 133030 aagattttctctccaaggta 133011
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 174 bits (88), Expect = 2e-40 Identities = 175/204 (85%) Strand = Plus / Minus Query: 426 aggtacctattctgagtggccatgtctactccataaacgacaacgccacggtggaggacg 485 |||| |||||||| | ||| || ||||||||||| || ||||| | ||||||||||| | Sbjct: 17094701 aggtgcctattcttaatggtcacgtctactccatcaatgacaatgtgacggtggaggatg 17094642 Query: 486 cagcgacggactacgaatttgacatcaggcagctggtcaaggtccgcaccgtaggagtct 545 ||||||||||||||||||| | |||| | |||||||||||| | ||||| || ||||| | Sbjct: 17094641 cagcgacggactacgaattcgtcatccgtcagctggtcaagattcgcacagtcggagttt 17094582 Query: 546 cggagagcaccgactgccccaagtttgatctcatcctccttggcatgggctccgacgggc 605 | ||||||| ||||||||||||||||||||| ||||||||| |||| ||||| || || | Sbjct: 17094581 cagagagcaacgactgccccaagtttgatctgatcctccttagcatcggctctgatggtc 17094522 Query: 606 atgtggcctcattgttccccaacc 629 |||| ||||||||||||||||||| Sbjct: 17094521 atgtagcctcattgttccccaacc 17094498 Score = 135 bits (68), Expect = 2e-28 Identities = 155/184 (84%) Strand = Plus / Minus Query: 103 aacaatggagagggaaatgactgcctcatatgagccaaaactgaatagtgaaatacggat 162 |||||||||||||||||| ||||||||||| || || ||||| ||||| |||| Sbjct: 17096269 aacaatggagagggaaattgtggcctcatatgaacccaagaagaataacgaaatcaggat 17096210 Query: 163 ttttgagagttcagatgagatagtaacagatctagctgagtatatctcccaagtttcaga 222 |||||||||||||| ||||| | ||||||||| ||||||||||| || ||||||||||| Sbjct: 17096209 gtttgagagttcagacgagatggcaacagatctggctgagtatatttcacaagtttcaga 17096150 Query: 223 aatctctgttaaagaaaggggatacttcgctattgcactgtctggagggccccttgtcag 282 ||| ||| |||| ||||| || ||||| |||||||| |||||||||||||| ||| |||| Sbjct: 17096149 aatttctattaaggaaagaggttactttgctattgccctgtctggagggcctcttatcag 17096090 Query: 283 tttt 286 |||| Sbjct: 17096089 tttt 17096086 Score = 119 bits (60), Expect = 1e-23 Identities = 120/140 (85%) Strand = Plus / Minus Query: 291 ggaaactctgtgaagcgccatacaacaagacactggattggtctaaatggtacatattct 350 ||||||| |||||||| ||||||||||| || ||||||||||||||||||||||| |||| Sbjct: 17095973 ggaaactttgtgaagcaccatacaacaaaaccctggattggtctaaatggtacatcttct 17095914 Query: 351 ggtctgatgaacgtgctgtagcgaagaaccatgcagacagtaactataagttaacaaaag 410 || ||||||||||||| || || |||||||||| || || ||||||| | |||||||| Sbjct: 17095913 gggctgatgaacgtgcggtggctaagaaccatgtggatagctactataaatcaacaaaag 17095854 Query: 411 aaggatttctatcgaaggta 430 ||| ||||| || |||||| Sbjct: 17095853 aagattttctctccaaggta 17095834
>gb|BC066136.1| Mus musculus zinc finger protein 512, mRNA (cDNA clone IMAGE:30107988), containing frame-shift errors Length = 3149 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagcgg 33 |||||||||||||||||| |||| |||||||| Sbjct: 1325 agcagcggcagcaggaggaggagaagcagcgg 1356
>gb|BC021520.1| Mus musculus zinc finger protein 512, mRNA (cDNA clone IMAGE:5352539), containing frame-shift errors Length = 3145 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagcgg 33 |||||||||||||||||| |||| |||||||| Sbjct: 1366 agcagcggcagcaggaggaggagaagcagcgg 1397
>gb|AC113276.9| Mus musculus chromosome 5, clone RP23-383E21, complete sequence Length = 245002 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Minus Query: 2 agcagcggcagcaggaggtggaggagcagcgg 33 |||||||||||||||||| |||| |||||||| Sbjct: 61123 agcagcggcagcaggaggaggagaagcagcgg 61092
>dbj|AK146353.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730060D15 product:zinc finger protein 512, full insert sequence Length = 3259 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagcgg 33 |||||||||||||||||| |||| |||||||| Sbjct: 1536 agcagcggcagcaggaggaggagaagcagcgg 1567
>dbj|AK149921.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530105P08 product:zinc finger protein 512, full insert sequence Length = 3242 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagcgg 33 |||||||||||||||||| |||| |||||||| Sbjct: 1519 agcagcggcagcaggaggaggagaagcagcgg 1550
>dbj|AK154918.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630111F22 product:zinc finger protein 512, full insert sequence Length = 3243 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagcgg 33 |||||||||||||||||| |||| |||||||| Sbjct: 1519 agcagcggcagcaggaggaggagaagcagcgg 1550
>ref|NM_172993.1| Mus musculus zinc finger protein 512 (Zfp512), mRNA Length = 3240 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagcgg 33 |||||||||||||||||| |||| |||||||| Sbjct: 1519 agcagcggcagcaggaggaggagaagcagcgg 1550
>dbj|AK084205.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230008H22 product:hypothetical Zinc finger, C2H2 type containing protein, full insert sequence Length = 3240 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagcgg 33 |||||||||||||||||| |||| |||||||| Sbjct: 1519 agcagcggcagcaggaggaggagaagcagcgg 1550
>dbj|AK173267.1| Mus musculus mRNA for mKIAA1805 protein Length = 3270 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagcgg 33 |||||||||||||||||| |||| |||||||| Sbjct: 1547 agcagcggcagcaggaggaggagaagcagcgg 1578
>gb|BC089160.1| Mus musculus zinc finger protein 512, mRNA (cDNA clone MGC:99957 IMAGE:5390706), complete cds Length = 3250 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagcgg 33 |||||||||||||||||| |||| |||||||| Sbjct: 1494 agcagcggcagcaggaggaggagaagcagcgg 1525
>ref|XM_001004351.1| PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 3 (Ddx23), mRNA Length = 3093 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 1003 gcggcagcaggaggtggaggagc 1025
>ref|XM_001004347.1| PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 2 (Ddx23), mRNA Length = 2840 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 618 gcggcagcaggaggtggaggagc 640
>ref|XM_001004358.1| PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 4 (Ddx23), mRNA Length = 2814 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 592 gcggcagcaggaggtggaggagc 614
>ref|XM_001000984.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 1 (Kctd17), mRNA Length = 921 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 685 gagcagcggcggcaggaggtggaggag 711
>ref|XM_001001016.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 4 (Kctd17), mRNA Length = 1297 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 685 gagcagcggcggcaggaggtggaggag 711
>ref|XM_001001003.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 3 (Kctd17), mRNA Length = 1182 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 685 gagcagcggcggcaggaggtggaggag 711
>ref|XM_001000989.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 2 (Kctd17), mRNA Length = 915 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 685 gagcagcggcggcaggaggtggaggag 711
>ref|XM_923613.2| PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 11 (Ddx23), mRNA Length = 3094 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 1003 gcggcagcaggaggtggaggagc 1025
>ref|XM_923616.2| PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 12 (Ddx23), mRNA Length = 2840 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 618 gcggcagcaggaggtggaggagc 640
>ref|XM_915142.2| PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 7 (Ddx23), mRNA Length = 2814 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 592 gcggcagcaggaggtggaggagc 614
>ref|XM_990731.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 9 (Kctd17), mRNA Length = 921 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 685 gagcagcggcggcaggaggtggaggag 711
>ref|XM_922913.2| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 7 (Kctd17), mRNA Length = 1574 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 685 gagcagcggcggcaggaggtggaggag 711
>ref|XM_922920.2| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 8 (Kctd17), mRNA Length = 1182 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 685 gagcagcggcggcaggaggtggaggag 711
>ref|XM_913834.2| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 6 (Kctd17), mRNA Length = 915 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 685 gagcagcggcggcaggaggtggaggag 711
>ref|XM_001004293.1| PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 7 (Ddx23), mRNA Length = 3093 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 1003 gcggcagcaggaggtggaggagc 1025
>ref|XM_902413.2| PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 6 (Ddx23), mRNA Length = 2840 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 618 gcggcagcaggaggtggaggagc 640
>ref|XM_619355.3| PREDICTED: Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 1 (Ddx23), mRNA Length = 2814 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 592 gcggcagcaggaggtggaggagc 614
>ref|XM_993270.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 4 (Kctd17), mRNA Length = 921 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 685 gagcagcggcggcaggaggtggaggag 711
>ref|XM_900689.2| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 2 (Kctd17), mRNA Length = 1574 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 685 gagcagcggcggcaggaggtggaggag 711
>ref|XM_900696.2| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 3 (Kctd17), mRNA Length = 1182 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 685 gagcagcggcggcaggaggtggaggag 711
>ref|XM_110121.8| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 1 (Kctd17), mRNA Length = 915 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 685 gagcagcggcggcaggaggtggaggag 711
>gb|BC049928.1| Mus musculus DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, mRNA (cDNA clone MGC:54908 IMAGE:5321607), complete cds Length = 3096 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 1003 gcggcagcaggaggtggaggagc 1025
>dbj|AK014820.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4921506D17 product:weakly similar to PRP28, U5 SNRNP 100 KDA PROTEIN [Homo sapiens], full insert sequence Length = 3412 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 1350 gcggcagcaggaggtggaggagc 1372
>ref|XM_217050.3| PREDICTED: Rattus norvegicus DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (predicted) (Ddx23_predicted), mRNA Length = 2559 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 616 gcggcagcaggaggtggaggagc 638
>ref|XM_217075.3| PREDICTED: Rattus norvegicus similar to hypothetical protein FLJ12242 (predicted) (LOC300317), mRNA Length = 2004 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 1519 gagcagcggcggcaggaggtggaggag 1545
>emb|AL590144.10| Mouse DNA sequence from clone RP23-79F10 on chromosome 15, complete sequence Length = 166677 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1 gagcagcggcagcaggaggtggaggag 27 |||||||||| |||||||||||||||| Sbjct: 141187 gagcagcggcggcaggaggtggaggag 141161
>gb|AC156543.10| Mus musculus chromosome 15, clone RP23-220F2, complete sequence Length = 199715 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 6 gcggcagcaggaggtggaggagc 28 ||||||||||||||||||||||| Sbjct: 51279 gcggcagcaggaggtggaggagc 51257
>gb|AC159421.1| Trypanosoma brucei chromosome 7 clone RPCI93-26A24, complete sequence Length = 158050 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 gcagcaggaggtggaggagcagcggg 34 ||||||||| |||||||||||||||| Sbjct: 35830 gcagcaggatgtggaggagcagcggg 35855
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 9 gcagcaggaggtggaggagcagcggg 34 ||||||||| |||||||||||||||| Sbjct: 1274293 gcagcaggatgtggaggagcagcggg 1274268
>gb|AC165278.4| Mus musculus chromosome 15, clone RP23-250O18, complete sequence Length = 187758 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagcgggg 35 |||||| ||||||||||| | ||||||||||||| Sbjct: 135091 agcagcagcagcaggaggagcaggagcagcgggg 135124
>ref|XM_858113.1| PREDICTED: Canis familiaris similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 11 (LOC477624), mRNA Length = 2796 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cggcagcaggaggtggaggagc 28 |||||||||||||||||||||| Sbjct: 629 cggcagcaggaggtggaggagc 650
>ref|XM_858090.1| PREDICTED: Canis familiaris similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 10 (LOC477624), mRNA Length = 2799 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cggcagcaggaggtggaggagc 28 |||||||||||||||||||||| Sbjct: 629 cggcagcaggaggtggaggagc 650
>ref|XM_858072.1| PREDICTED: Canis familiaris similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 9 (LOC477624), mRNA Length = 2796 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cggcagcaggaggtggaggagc 28 |||||||||||||||||||||| Sbjct: 629 cggcagcaggaggtggaggagc 650
>ref|XM_858053.1| PREDICTED: Canis familiaris similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 8 (LOC477624), mRNA Length = 2775 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cggcagcaggaggtggaggagc 28 |||||||||||||||||||||| Sbjct: 629 cggcagcaggaggtggaggagc 650
>ref|XM_858028.1| PREDICTED: Canis familiaris similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 7 (LOC477624), mRNA Length = 2793 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cggcagcaggaggtggaggagc 28 |||||||||||||||||||||| Sbjct: 629 cggcagcaggaggtggaggagc 650
>ref|XM_858005.1| PREDICTED: Canis familiaris similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 6 (LOC477624), mRNA Length = 2781 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cggcagcaggaggtggaggagc 28 |||||||||||||||||||||| Sbjct: 629 cggcagcaggaggtggaggagc 650
>ref|XM_534818.2| PREDICTED: Canis familiaris similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 1 (LOC477624), mRNA Length = 2766 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cggcagcaggaggtggaggagc 28 |||||||||||||||||||||| Sbjct: 629 cggcagcaggaggtggaggagc 650
>ref|XM_857953.1| PREDICTED: Canis familiaris similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 5 (LOC477624), mRNA Length = 815 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cggcagcaggaggtggaggagc 28 |||||||||||||||||||||| Sbjct: 629 cggcagcaggaggtggaggagc 650
>ref|XM_857900.1| PREDICTED: Canis familiaris similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 3 (LOC477624), mRNA Length = 2848 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cggcagcaggaggtggaggagc 28 |||||||||||||||||||||| Sbjct: 654 cggcagcaggaggtggaggagc 675
>ref|XM_845958.1| PREDICTED: Canis familiaris similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, transcript variant 2 (LOC477624), mRNA Length = 2823 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 cggcagcaggaggtggaggagc 28 |||||||||||||||||||||| Sbjct: 629 cggcagcaggaggtggaggagc 650
>ref|XM_818896.1| Trypanosoma brucei TREU927 clone RPCI93-26A24 hypothetical protein (Tb927.7.4840) partial mRNA Length = 1005 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 gcagcaggaggtggaggagcagcggg 34 ||||||||| |||||||||||||||| Sbjct: 732 gcagcaggatgtggaggagcagcggg 757
>gb|AC102783.10| Mus musculus chromosome 14, clone RP23-390K3, complete sequence Length = 199993 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggagcag 30 ||||||| ||||||||||| |||||||||| Sbjct: 85 gagcagcagcagcaggaggaggaggagcag 114
>gb|AY122076.1| Drosophila melanogaster AT18175 full insert cDNA Length = 3314 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagc 31 |||||| ||||||| ||||||||||||||| Sbjct: 2332 agcagcagcagcagaaggtggaggagcagc 2361
>ref|NM_142755.1| Drosophila melanogaster CG5732-RA (CG5732), mRNA Length = 4561 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagc 31 |||||| ||||||| ||||||||||||||| Sbjct: 2326 agcagcagcagcagaaggtggaggagcagc 2355
>gb|AC008043.5| Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone BACR05A08, complete sequence Length = 169581 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagc 31 |||||| ||||||| ||||||||||||||| Sbjct: 97578 agcagcagcagcagaaggtggaggagcagc 97607
>gb|AC055716.24|AC055716 Homo sapiens 12 BAC RP11-641A6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110819 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagc 31 |||| ||||||||||||||||| ||||||| Sbjct: 82592 agcaacggcagcaggaggtggaagagcagc 82621
>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete sequence Length = 287397 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagc 31 |||||| ||||||| ||||||||||||||| Sbjct: 80392 agcagcagcagcagaaggtggaggagcagc 80421
>tpe|BN000481.1| TPA: TPA_inf: Homo sapiens psiKRTF pseudogene Length = 15000 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 2 agcagcggcagcaggaggtggaggagcagc 31 |||| ||||||||||||||||| ||||||| Sbjct: 6409 agcaacggcagcaggaggtggaagagcagc 6380
>gb|BC079109.1| Rattus norvegicus similar to chromosome 14 open reading frame 94, mRNA (cDNA clone MGC:94104 IMAGE:7125564), complete cds Length = 1552 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cagcaggaggtggaggagcagc 31 |||||||||||||||||||||| Sbjct: 662 cagcaggaggtggaggagcagc 683
>ref|NM_001013995.1| Rattus norvegicus similar to chromosome 14 open reading frame 94 (RGD1305288), mRNA Length = 1552 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 cagcaggaggtggaggagcagc 31 |||||||||||||||||||||| Sbjct: 662 cagcaggaggtggaggagcagc 683
>emb|CT033773.8| Mouse DNA sequence from clone RP23-176M23 on chromosome 14, complete sequence Length = 133931 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1 gagcagcggcagcaggaggtggaggagcag 30 ||||||| ||||||||||| |||||||||| Sbjct: 3465 gagcagcagcagcaggaggaggaggagcag 3436
>emb|CT025562.10| Mouse DNA sequence from clone RP24-225O12 on chromosome 14, complete sequence Length = 194430 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 gagcagcggcagcaggaggtggaggagcag 30 ||||||| |||| ||||||||||||||||| Sbjct: 64364 gagcagcagcaggaggaggtggaggagcag 64393
>ref|XM_511542.1| PREDICTED: Pan troglodytes similar to Histone deacetylase 5 (HD5) (Antigen NY-CO-9) (LOC454721), mRNA Length = 4995 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 agcggcagcaggaggtggaggagcagcgg 33 |||||||||||||| ||||| |||||||| Sbjct: 1973 agcggcagcaggagctggagcagcagcgg 2001
>ref|XM_512982.1| PREDICTED: Pan troglodytes similar to Apoptosis-inducing protein D (LOC456385), mRNA Length = 1758 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 1559 agcagcggcaggaggaggcggaggagcag 1587
>ref|XM_512558.1| PREDICTED: Pan troglodytes similar to Apoptosis-inducing protein D (LOC455912), mRNA Length = 1803 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 1604 agcagcggcaggaggaggcggaggagcag 1632
>gb|AY713945.1| Gasterosteus aculeatus MHC class II antigen gene cluster, complete sequence Length = 99318 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gcagcaggaggtggaggagca 29 ||||||||||||||||||||| Sbjct: 99282 gcagcaggaggtggaggagca 99302
>gb|BC051824.1| Homo sapiens histone deacetylase 5, transcript variant 1, mRNA (cDNA clone MGC:60081 IMAGE:6043491), complete cds Length = 3675 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 agcggcagcaggaggtggaggagcagcgg 33 |||||||||||||| ||||| |||||||| Sbjct: 618 agcggcagcaggagctggagcagcagcgg 646
>ref|NM_001015053.1| Homo sapiens histone deacetylase 5 (HDAC5), transcript variant 3, mRNA Length = 5327 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 agcggcagcaggaggtggaggagcagcgg 33 |||||||||||||| ||||| |||||||| Sbjct: 742 agcggcagcaggagctggagcagcagcgg 770
>ref|NM_005474.4| Homo sapiens histone deacetylase 5 (HDAC5), transcript variant 1, mRNA Length = 5324 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 agcggcagcaggaggtggaggagcagcgg 33 |||||||||||||| ||||| |||||||| Sbjct: 739 agcggcagcaggagctggagcagcagcgg 767
>gb|AC129606.4| Mus musculus BAC clone RP23-128L6 from 8, complete sequence Length = 235915 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 aacaagacactggattggtct 334 ||||||||||||||||||||| Sbjct: 233070 aacaagacactggattggtct 233090
>emb|AL669984.1| Human DNA sequence from clone RP11-775I22 on chromosome 6 Contains part of the LAMA2 gene for laminin, alpha 2 (merosin, congenital muscular dystrophy) (LAMM) and a bone morphogenetic protein receptor type IA (BMPR1B) pseudogene, complete sequence Length = 93893 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 ataagttaacaaaagaaggat 416 ||||||||||||||||||||| Sbjct: 65196 ataagttaacaaaagaaggat 65176
>emb|CR859595.1| Pongo pygmaeus mRNA; cDNA DKFZp459O115 (from clone DKFZp459O115) Length = 3603 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 agcggcagcaggaggtggaggagcagcgg 33 |||||||||||||| ||||| |||||||| Sbjct: 553 agcggcagcaggagctggagcagcagcgg 581
>gb|BC002744.2| Homo sapiens pleckstrin homology domain containing, family F (with FYVE domain) member 1, mRNA (cDNA clone MGC:4090 IMAGE:3628796), complete cds Length = 1727 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 697 agcagcggcaggaggaggcggaggagcag 725
>emb|BX511122.4| Zebrafish DNA sequence from clone CH211-129H1 in linkage group 7, complete sequence Length = 56808 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 391 taactataagttaacaaaaga 411 ||||||||||||||||||||| Sbjct: 43422 taactataagttaacaaaaga 43402
>emb|CR615714.1| full-length cDNA clone CS0DI042YL01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1602 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 659 agcagcggcaggaggaggcggaggagcag 687
>emb|CR626406.1| full-length cDNA clone CS0DI043YP01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1593 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 659 agcagcggcaggaggaggcggaggagcag 687
>emb|CR626339.1| full-length cDNA clone CS0DC014YB10 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1704 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 743 agcagcggcaggaggaggcggaggagcag 771
>ref|NM_024310.2| Homo sapiens pleckstrin homology domain containing, family F (with FYVE domain) member 1 (PLEKHF1), mRNA Length = 2094 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 1107 agcagcggcaggaggaggcggaggagcag 1135
>emb|CR606040.1| full-length cDNA clone CS0DI014YI24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1686 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 727 agcagcggcaggaggaggcggaggagcag 755
>emb|CR602222.1| full-length cDNA clone CS0DC025YB02 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1657 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 692 agcagcggcaggaggaggcggaggagcag 720
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 gcagcggcagcaggaggtggaggagcagc 31 |||||||| ||||| |||||||||||||| Sbjct: 36054 gcagcggcggcaggcggtggaggagcagc 36082
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 gcagcggcagcaggaggtggaggagcagc 31 |||||||| ||||| |||||||||||||| Sbjct: 14767 gcagcggcggcaggcggtggaggagcagc 14795
>gb|AE011654.1| Xanthomonas axonopodis pv. citri str. 306, section 32 of 469 of the complete genome Length = 8800 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 ccataaacgacaacgccacgg 476 ||||||||||||||||||||| Sbjct: 3998 ccataaacgacaacgccacgg 4018
>dbj|AK027758.1| Homo sapiens cDNA FLJ14852 fis, clone PLACE1000786 Length = 1696 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 702 agcagcggcaggaggaggcggaggagcag 730
>emb|CR591930.1| full-length cDNA clone CS0DI027YA24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1669 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 695 agcagcggcaggaggaggcggaggagcag 723
>gb|AF434818.1|AF434818 Homo sapiens phafin 1 mRNA, complete cds Length = 840 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 641 agcagcggcaggaggaggcggaggagcag 669
>gb|AC010644.7| Homo sapiens chromosome 19 clone LLNLR-258B1, complete sequence Length = 36957 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 10895 agcagcggcaggaggaggcggaggagcag 10923
>gb|AC025186.6| Homo sapiens chromosome 5 clone CTD-2375G15, complete sequence Length = 146802 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 atacaacaagacactggattg 330 ||||||||||||||||||||| Sbjct: 39162 atacaacaagacactggattg 39142
>gb|BC013140.1|BC013140 Homo sapiens, clone IMAGE:3867625, mRNA, partial cds Length = 1549 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 agcggcagcaggaggtggaggagcagcgg 33 |||||||||||||| ||||| |||||||| Sbjct: 189 agcggcagcaggagctggagcagcagcgg 217
>tpg|BK000028.1| TPA: TPA_exp: Homo sapiens histone deacetylase (HDAC5) gene, complete cds Length = 41199 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 agcggcagcaggaggtggaggagcagcgg 33 |||||||||||||| ||||| |||||||| Sbjct: 26079 agcggcagcaggagctggagcagcagcgg 26107
>gb|AC023855.15| Homo sapiens chromosome 17, clone RP11-546M21, complete sequence Length = 146219 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 agcggcagcaggaggtggaggagcagcgg 33 |||||||||||||| ||||| |||||||| Sbjct: 42073 agcggcagcaggagctggagcagcagcgg 42101
>gb|AC103935.10| Mus musculus chromosome 8, clone RP23-431O7, complete sequence Length = 205702 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 314 aacaagacactggattggtct 334 ||||||||||||||||||||| Sbjct: 10858 aacaagacactggattggtct 10878
>emb|CR293517.8| Zebrafish DNA sequence from clone CH211-203D21 in linkage group 7, complete sequence Length = 78112 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 391 taactataagttaacaaaaga 411 ||||||||||||||||||||| Sbjct: 4151 taactataagttaacaaaaga 4171
>gb|AF132608.1|AF132608 Homo sapiens histone deacetylase 5 mRNA, complete cds Length = 3369 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 agcggcagcaggaggtggaggagcagcgg 33 |||||||||||||| ||||| |||||||| Sbjct: 407 agcggcagcaggagctggagcagcagcgg 435
>gb|AC004150.8|AC004150 Homo sapiens chromosome 17, clone hRPC.971_F_3, complete sequence Length = 120766 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 agcggcagcaggaggtggaggagcagcgg 33 |||||||||||||| ||||| |||||||| Sbjct: 26856 agcggcagcaggagctggagcagcagcgg 26884
>gb|BC018876.2| Homo sapiens pleckstrin homology domain containing, family F (with FYVE domain) member 1, mRNA (cDNA clone IMAGE:3629311) Length = 1728 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 697 agcagcggcaggaggaggcggaggagcag 725
>gb|AY037145.2| Homo sapiens apoptosis-inducing protein (APPD) mRNA, complete cds Length = 2094 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcag 30 ||||||||||| |||||| |||||||||| Sbjct: 1107 agcagcggcaggaggaggcggaggagcag 1135
>dbj|AB011172.2| Homo sapiens mRNA for KIAA0600 protein, partial cds Length = 5040 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 5 agcggcagcaggaggtggaggagcagcgg 33 |||||||||||||| ||||| |||||||| Sbjct: 711 agcggcagcaggagctggagcagcagcgg 739
>gb|AF380352.1| Gallus gallus UNC5H2 mRNA, complete cds Length = 4743 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 gcagcggcagcaggaggtggagga 26 ||||||||||||||||| |||||| Sbjct: 150 gcagcggcagcaggaggaggagga 127
>ref|NM_001031225.1| Gallus gallus unc-5 homolog B (C. elegans) (UNC5B), mRNA Length = 4743 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 gcagcggcagcaggaggtggagga 26 ||||||||||||||||| |||||| Sbjct: 150 gcagcggcagcaggaggaggagga 127
>ref|XM_420135.1| PREDICTED: Gallus gallus similar to KIAA1357 protein (LOC422133), mRNA Length = 4031 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtg 21 |||||||||||||||||||| Sbjct: 1511 agcagcggcagcaggaggtg 1530
>gb|AY558586.1| Saccharomyces cerevisiae clone FLH111067.01X YLR405W gene, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 agaaatctctgttaaagaaa 239 |||||||||||||||||||| Sbjct: 923 agaaatctctgttaaagaaa 942
>gb|U19729.2|YSCL8084 Saccharomyces cerevisiae chromosome XII cosmid 8084 Length = 40198 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 agaaatctctgttaaagaaa 239 |||||||||||||||||||| Sbjct: 33310 agaaatctctgttaaagaaa 33329
>ref|XM_446009.1| Candida glabrata CBS138, CAGL0F00803g partial mRNA Length = 2517 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 attatttggtgtagcaatag 77 |||||||||||||||||||| Sbjct: 1893 attatttggtgtagcaatag 1874
>emb|BX664740.3| Human DNA sequence from clone WI2-85598E4 on chromosome 1 Contains the 5' end of the IPP gene for intracisternal A particle-promoted polypeptide and a CpG island, complete sequence Length = 38002 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ctataagttaacaaaagaag 413 |||||||||||||||||||| Sbjct: 19430 ctataagttaacaaaagaag 19411
>emb|AL365259.23| Human DNA sequence from clone RP11-624M8 on chromosome 6 Contains part of a novel gene, complete sequence Length = 106607 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 aatggagagggaaatgactg 125 |||||||||||||||||||| Sbjct: 65310 aatggagagggaaatgactg 65291
>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence Length = 927101 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 attatttggtgtagcaatag 77 |||||||||||||||||||| Sbjct: 90346 attatttggtgtagcaatag 90327
>gb|DQ090992.1|DQ090992S1 Macaca mulatta regulating synaptic membrane exocytosis 1 (Rims1) gene, exon 1 Length = 376 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 6 gcggcagcaggaggtggaggagcagcgg 33 ||||| |||||||| ||||||||||||| Sbjct: 75 gcggcggcaggaggaggaggagcagcgg 48
>gb|DQ092320.1| Macaca mulatta regulating synaptic membrane exocytosis 1 (rims1) mRNA, complete cds Length = 6434 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 6 gcggcagcaggaggtggaggagcagcgg 33 ||||| |||||||| ||||||||||||| Sbjct: 75 gcggcggcaggaggaggaggagcagcgg 48
>gb|AF192751.1| Xenopus laevis synapsin I (SYN I) mRNA, partial cds Length = 1285 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 agcagcggcagcaggaggtggagg 25 |||||||||||||||||| ||||| Sbjct: 144 agcagcggcagcaggaggaggagg 121
>emb|CR589949.3| Human DNA sequence from clone WI2-3563O19 on chromosome 1, complete sequence Length = 37816 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ctataagttaacaaaagaag 413 |||||||||||||||||||| Sbjct: 27414 ctataagttaacaaaagaag 27395
>gb|AC010310.5| Homo sapiens chromosome 5 clone CTB-55B8, complete sequence Length = 243558 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gcaaacaatggagagggaaa 119 |||||||||||||||||||| Sbjct: 97995 gcaaacaatggagagggaaa 98014
>gb|BC111337.1| Bos taurus cDNA clone MGC:134463 IMAGE:8041068, complete cds Length = 2973 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagcgg 33 ||||||||||| ||||| ||||| |||||||| Sbjct: 765 agcagcggcaggaggagctggagaagcagcgg 796
>gb|AC008462.6|AC008462 Homo sapiens chromosome 5 clone CTC-352J10, complete sequence Length = 183591 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 286 tttggggaaactctgtgaag 305 |||||||||||||||||||| Sbjct: 123360 tttggggaaactctgtgaag 123379
>dbj|AK182528.1| Mus musculus cDNA, clone:Y0G0122L15, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000038356, based on BLAT search Length = 437 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 232 taaagaaaggggatacttcgctattgca 259 |||||||||||||||||| ||| ||||| Sbjct: 87 taaagaaaggggatactttgctcttgca 114
>emb|AL845431.7| Mouse DNA sequence from clone RP23-263K14 on chromosome X, complete sequence Length = 88599 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 tcaggcagctggtcaaggtc 529 |||||||||||||||||||| Sbjct: 77002 tcaggcagctggtcaaggtc 77021
>gb|AC010358.5|AC010358 Homo sapiens chromosome 5 clone CTD-2031C5, complete sequence Length = 159129 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 gcaaacaatggagagggaaa 119 |||||||||||||||||||| Sbjct: 117641 gcaaacaatggagagggaaa 117660
>ref|XM_316120.2| Anopheles gambiae str. PEST ENSANGP00000020384 (ENSANGG00000017895), partial mRNA Length = 1986 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 agcaggaggtggaggagcag 30 |||||||||||||||||||| Sbjct: 485 agcaggaggtggaggagcag 504
>gb|U96736.1|SLU96736 Selaginella lepidophylla trehalose-6-phosphate synthase mRNA, complete cds Length = 3223 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 520 ggtcaaggtccgcaccgtaggagtctcg 547 |||| |||||||| |||||||||||||| Sbjct: 2420 ggtcgaggtccgccccgtaggagtctcg 2447
>dbj|AB093554.1| Streptomyces laurentii plasmid pSLS DNA, complete sequence Length = 15397 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 gagcagcggcagcaggaggt 20 |||||||||||||||||||| Sbjct: 2602 gagcagcggcagcaggaggt 2583
>ref|NM_001038025.1| Bos taurus similar to Histone deacetylase 5 (HD5) (Antigen NY-CO-9) (MGC134463), mRNA Length = 2973 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtggaggagcagcgg 33 ||||||||||| ||||| ||||| |||||||| Sbjct: 765 agcagcggcaggaggagctggagaagcagcgg 796
>gb|U65923.1|TGU65923 Tupaia glis involucrin gene, allele small, complete cds Length = 1029 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtg 21 |||||||||||||||||||| Sbjct: 986 agcagcggcagcaggaggtg 1005
>gb|U65922.1|TGU65922 Tupaia glis involucrin gene, allele large, complete cds Length = 1203 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 agcagcggcagcaggaggtg 21 |||||||||||||||||||| Sbjct: 1160 agcagcggcagcaggaggtg 1179
>dbj|AP006409.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT25E08, TM0299, complete sequence Length = 109465 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 agtatatctcccaagtttca 220 |||||||||||||||||||| Sbjct: 26227 agtatatctcccaagtttca 26208
>ref|NM_001037280.1| Macaca mulatta regulating synaptic membrane exocytosis 1 (RIMS1), mRNA Length = 6434 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 6 gcggcagcaggaggtggaggagcagcgg 33 ||||| |||||||| ||||||||||||| Sbjct: 75 gcggcggcaggaggaggaggagcagcgg 48 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,494,881 Number of Sequences: 3902068 Number of extensions: 5494881 Number of successful extensions: 120550 Number of sequences better than 10.0: 139 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 120180 Number of HSP's gapped (non-prelim): 356 length of query: 629 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 606 effective length of database: 17,143,297,704 effective search space: 10388838408624 effective search space used: 10388838408624 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)