ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal29i21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472804.1| Oryza sativa (japonica cultivar-group), predic... 402 e-109
2dbj|AK101835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 398 e-108
3gb|BT017430.1| Zea mays clone EL01N0403D03.c mRNA sequence 367 3e-98
4gb|AY110654.1| Zea mays CL6_1 mRNA sequence 182 9e-43
5emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4,... 174 2e-40
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
7emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k... 82 3e-12
8gb|BT009598.1| Triticum aestivum clone wre1n.pk0075.b10:fis, ful... 44 0.55
9dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 44 0.55
10ref|NM_126473.2| Arabidopsis thaliana indole-3-glycerol-phosphat... 42 2.2
11gb|AC165337.2| Mus musculus BAC clone RP24-356N8 from chromosome... 42 2.2
12ref|XM_450324.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.2
13ref|XM_450323.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.2
14gb|AC023946.5| Homo sapiens chromosome 11, clone RP11-567I13, co... 42 2.2
15gb|AC104031.6| Homo sapiens chromosome 11, clone RP11-483L5, com... 42 2.2
16gb|AY086973.1| Arabidopsis thaliana clone 3006 mRNA, complete se... 42 2.2
17dbj|AK117503.1| Arabidopsis thaliana At2g04400 mRNA for putative... 42 2.2
18dbj|AK071383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
19dbj|AK059358.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
20gb|AC167706.2| Reniera sp. JGI-2005 clone JGIBAYC-9H10, complete... 42 2.2
21gb|U18770.1|ATU18770 Arabidopsis thaliana indole-3-glycerol phos... 42 2.2
22gb|AY596295.1| Haloarcula marismortui ATCC 43049 plasmid pNG600,... 40 8.6
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.6
24gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 8.6
25emb|X04960.1|BLTRP Brevibacterium lactofermentum tryptophan operon 40 8.6
26emb|BX927157.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 8.6
27emb|AJ277855.1|RSO277855 Ralstonia solanacearum partial 16S rRNA... 40 8.6
28emb|AJ277851.1|RSO277851 Ralstonia solanacearum partial 16S rRNA... 40 8.6
29ref|XM_689696.1| PREDICTED: Danio rerio DGKI protein (DGKI), mRNA 40 8.6
30dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
31emb|BX819822.1|CNS0A8JB Arabidopsis thaliana Full-length cDNA Co... 40 8.6
32dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 8.6
33gb|AC021087.5| Homo sapiens chromosome 5 clone CTD-2083E4, compl... 40 8.6
34dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome 40 8.6
35emb|CR356225.5| Zebrafish DNA sequence from clone DKEY-210E9 in ... 40 8.6
36emb|AL773533.12| Mouse DNA sequence from clone RP23-159H12 on ch... 40 8.6
37emb|AL669982.10| Mouse DNA sequence from clone RP23-297N24 on ch... 40 8.6
38dbj|AB032934.1| Vibrio alginolyticus pfsA, orfC, orfD genes for ... 40 8.6 
>ref|XM_472804.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1182

 Score =  402 bits (203), Expect = e-109
 Identities = 392/455 (86%)
 Strand = Plus / Plus

                                                                       
Query: 174 atgaaggagaaaatgcccttgtacaggctgaaaggcccgctggacaatgcgcctccggcc 233
           |||||||||| || |||  |||||| |||||| || |||||||| ||||| |||||||  
Sbjct: 394 atgaaggagagaaggccactgtacatgctgaaggggccgctggagaatgctcctccggtg 453

                                                                       
Query: 234 agggactttgttgctgcgctgaaagcatcgtacaatcggactgctctgcccgctctgatt 293
           ||||| || ||||  | | |||| || || |   ||||||||| |||||| |||||||||
Sbjct: 454 agggatttcgttggggtgttgaaggcgtcttttgatcggactggtctgcctgctctgatt 513

                                                                       
Query: 294 gcggaggtcaagaaggcttcaccaagccggggggttcttagggagaatttcgacccggtc 353
           || |||||||||||||||||||| ||||| || || || |||||| | ||||| ||||| 
Sbjct: 514 gcagaggtcaagaaggcttcaccgagccgcggtgtcctgagggaggacttcgagccggtt 573

                                                                       
Query: 354 gagatcgcccaagcatacgagaaaaatggagcagcatgcttaagtgttcttacagattca 413
            ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 574 cagatcgcccaaacatatgagaaaaatggagcagcatgcttaagtgttctcacagatgca 633

                                                                       
Query: 414 aaattctttcagggaagtttcgactacttggaggctatacgcaatgctggagtaaagtgt 473
           |||| ||||||||||||||| ||||| ||||| ||||||||||||||||||||| |||||
Sbjct: 634 aaatactttcagggaagttttgactatttggatgctatacgcaatgctggagtacagtgt 693

                                                                       
Query: 474 cctcttctgtgcaaagagttcatcattgatgcttggcagctttactatgcacggtctaag 533
           ||||| |||||||||||||||||  ||||||| ||||| ||||||||||| || |  |||
Sbjct: 694 cctctgctgtgcaaagagttcattgttgatgcctggcaactttactatgcgcgtttgaag 753

                                                                       
Query: 534 ggagcagatgctgttcttctgattgctgccatcttacctgatcgtgatatcagttatatg 593
           |||||||||||||||||||||||||||||  |||||||||||| ||||||||  ||||||
Sbjct: 754 ggagcagatgctgttcttctgattgctgctgtcttacctgatcttgatatcaagtatatg 813

                                              
Query: 594 ctgaaaatatgcaaaatactcgggatggcagcttt 628
            ||||||||||||||||||| || ||||| |||||
Sbjct: 814 ttgaaaatatgcaaaatacttggcatggctgcttt 848



 Score =  147 bits (74), Expect = 5e-32
 Identities = 125/142 (88%)
 Strand = Plus / Plus

                                                                       
Query: 16  tcgaggggctcgacgggataaagatccggaggcgcccggtcacgggcccgtccgtgcacc 75
           |||||||| | |||||||||| ||||||||||||||| || || || ||| | |||||| 
Sbjct: 179 tcgagggggttgacgggataaggatccggaggcgccccgtgaccgggccgccggtgcact 238

                                                                       
Query: 76  acgtgggccccttccagttccgcctcgagaacgaggggaacacgccgcgcaacatcctcg 135
           ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 239 acgtggggccgttccagttccgcctcgagaacgaggggaacacgccgcggaacatcctcg 298

                                 
Query: 136 agaagattgtatggaacaagga 157
           ||| ||| || ||| |||||||
Sbjct: 299 agaggatcgtgtgggacaagga 320
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>dbj|AK101835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069C16, full
           insert sequence
          Length = 974

 Score =  398 bits (201), Expect = e-108
 Identities = 321/361 (88%)
 Strand = Plus / Plus

                                                                       
Query: 268 atcggactgctctgcccgctctgattgcggaggtcaagaaggcttcaccaagccgggggg 327
           ||||||||| |||||| ||||||||||| |||||||||||||||||||| ||||| || |
Sbjct: 49  atcggactggtctgcctgctctgattgcagaggtcaagaaggcttcaccgagccgcggtg 108

                                                                       
Query: 328 ttcttagggagaatttcgacccggtcgagatcgcccaagcatacgagaaaaatggagcag 387
           | || |||||| | ||||| |||||  ||||||||||| |||| ||||||||||||||||
Sbjct: 109 tcctgagggaggacttcgagccggttcagatcgcccaaacatatgagaaaaatggagcag 168

                                                                       
Query: 388 catgcttaagtgttcttacagattcaaaattctttcagggaagtttcgactacttggagg 447
           |||||||||||||||| |||||| |||||| ||||||||||||||| ||||| ||||| |
Sbjct: 169 catgcttaagtgttctcacagatgcaaaatactttcagggaagttttgactatttggatg 228

                                                                       
Query: 448 ctatacgcaatgctggagtaaagtgtcctcttctgtgcaaagagttcatcattgatgctt 507
           |||||||||||||||||||| |||||||||| |||||||||||||||||  ||||||| |
Sbjct: 229 ctatacgcaatgctggagtacagtgtcctctgctgtgcaaagagttcattgttgatgcct 288

                                                                       
Query: 508 ggcagctttactatgcacggtctaagggagcagatgctgttcttctgattgctgccatct 567
           |||| ||||||||||| || |  ||||||||||||||||||||||||||||||||  |||
Sbjct: 289 ggcaactttactatgcgcgtttgaagggagcagatgctgttcttctgattgctgctgtct 348

                                                                       
Query: 568 tacctgatcgtgatatcagttatatgctgaaaatatgcaaaatactcgggatggcagctt 627
           ||||||||| ||||||||  |||||| ||||||||||||||||||| || ||||| ||||
Sbjct: 349 tacctgatcttgatatcaagtatatgttgaaaatatgcaaaatacttggcatggctgctt 408

            
Query: 628 t 628
           |
Sbjct: 409 t 409
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>gb|BT017430.1| Zea mays clone EL01N0403D03.c mRNA sequence
          Length = 1119

 Score =  367 bits (185), Expect = 3e-98
 Identities = 401/473 (84%)
 Strand = Plus / Minus

                                                                        
Query: 156  gacgttgagatttggcagatgaaggagaaaatgcccttgtacaggctgaaaggcccgctg 215
            ||||| ||| ||| ||||||||||||||  | |||| |||||| |||||| || ||||| 
Sbjct: 1119 gacgtcgaggtttcgcagatgaaggagaggaggcccctgtacatgctgaagggtccgctt 1060

                                                                        
Query: 216  gacaatgcgcctccggccagggactttgttgctgcgctgaaagcatcgtacaatcggact 275
            ||   ||| || || || |||||||| ||||  ||||| || || || ||| |||| |||
Sbjct: 1059 gaggctgctccccccgctagggacttcgttggggcgctcaaggcgtcctacgatcgaact 1000

                                                                        
Query: 276  gctctgcccgctctgattgcggaggtcaagaaggcttcaccaagccggggggttcttagg 335
            |   |||| ||||||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 999  ggcttgcctgctctgattgcggaggtcaagaaggcttcaccaagccggggtgttatcagg 940

                                                                        
Query: 336  gagaatttcgacccggtcgagatcgcccaagcatacgagaaaaatggagcagcatgctta 395
            |||||||| || |||||  ||||||| || ||||| |||||||| |||||||||||| | 
Sbjct: 939  gagaattttgatccggttcagatcgctcaggcatatgagaaaaacggagcagcatgcctt 880

                                                                        
Query: 396  agtgttcttacagattcaaaattctttcagggaagtttcgactacttggaggctatacgc 455
            |||||||||||||||  ||| | |||||||||||||||  || |||||||||||||||||
Sbjct: 879  agtgttcttacagatgaaaagtactttcagggaagtttttacaacttggaggctatacgc 820

                                                                        
Query: 456  aatgctggagtaaagtgtcctcttctgtgcaaagagttcatcattgatgcttggcagctt 515
            |||||||||||  |||| ||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 819  aatgctggagtccagtgccctcttctgtgcaaagagttcattattgatgcttggcaactt 760

                                                                        
Query: 516  tactatgcacggtctaagggagcagatgctgttcttctgattgctgccatcttacctgat 575
            |||||||||||||| ||||| ||||||||||||||||| || |||||  | |||||||| 
Sbjct: 759  tactatgcacggtccaagggtgcagatgctgttcttctaatagctgctgtattacctgac 700

                                                                 
Query: 576  cgtgatatcagttatatgctgaaaatatgcaaaatactcgggatggcagcttt 628
            || |||||||  || ||| ||||||| ||||||||||| |||||||| |||||
Sbjct: 699  cgcgatatcaaatacatgttgaaaatttgcaaaatacttgggatggctgcttt 647
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>gb|AY110654.1| Zea mays CL6_1 mRNA sequence
          Length = 798

 Score =  182 bits (92), Expect = 9e-43
 Identities = 155/176 (88%)
 Strand = Plus / Minus

                                                                       
Query: 453 cgcaatgctggagtaaagtgtcctcttctgtgcaaagagttcatcattgatgcttggcag 512
           ||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||| 
Sbjct: 797 cgcaatgctggagtccagtgccctcttctgtgcaaagagttcattattgatgcttggcaa 738

                                                                       
Query: 513 ctttactatgcacggtctaagggagcagatgctgttcttctgattgctgccatcttacct 572
           ||||||||||||||||| ||||| ||||||||||||||||| || |||||  | ||||||
Sbjct: 737 ctttactatgcacggtccaagggtgcagatgctgttcttctaatagctgctgtattacct 678

                                                                   
Query: 573 gatcgtgatatcagttatatgctgaaaatatgcaaaatactcgggatggcagcttt 628
           || || |||||||  || ||| ||||||| ||||||||||| |||||||| |||||
Sbjct: 677 gaccgcgatatcaaatacatgttgaaaatttgcaaaatacttgggatggctgcttt 622
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>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02,
             complete sequence
          Length = 167988

 Score =  174 bits (88), Expect = 2e-40
 Identities = 142/160 (88%)
 Strand = Plus / Minus

                                                                         
Query: 469   agtgtcctcttctgtgcaaagagttcatcattgatgcttggcagctttactatgcacggt 528
             |||||||||| |||||||||||||||||  ||||||| ||||| ||||||||||| || |
Sbjct: 56443 agtgtcctctgctgtgcaaagagttcattgttgatgcctggcaactttactatgcgcgtt 56384

                                                                         
Query: 529   ctaagggagcagatgctgttcttctgattgctgccatcttacctgatcgtgatatcagtt 588
               ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||  |
Sbjct: 56383 tgaagggagcagatgctgttcttctgattgctgctgtcttacctgatcttgatatcaagt 56324

                                                     
Query: 589   atatgctgaaaatatgcaaaatactcgggatggcagcttt 628
             ||||| ||||||||||||||||||| || ||||| |||||
Sbjct: 56323 atatgttgaaaatatgcaaaatacttggcatggctgcttt 56284



 Score =  147 bits (74), Expect = 5e-32
 Identities = 125/142 (88%)
 Strand = Plus / Minus

                                                                         
Query: 16    tcgaggggctcgacgggataaagatccggaggcgcccggtcacgggcccgtccgtgcacc 75
             |||||||| | |||||||||| ||||||||||||||| || || || ||| | |||||| 
Sbjct: 57933 tcgagggggttgacgggataaggatccggaggcgccccgtgaccgggccgccggtgcact 57874

                                                                         
Query: 76    acgtgggccccttccagttccgcctcgagaacgaggggaacacgccgcgcaacatcctcg 135
             ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 57873 acgtggggccgttccagttccgcctcgagaacgaggggaacacgccgcggaacatcctcg 57814

                                   
Query: 136   agaagattgtatggaacaagga 157
             ||| ||| || ||| |||||||
Sbjct: 57813 agaggatcgtgtgggacaagga 57792



 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                         
Query: 355   agatcgcccaagcatacgagaaaaatggagcagcatgcttaagtgttcttacagattcaa 414
             ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 56761 agatcgcccaaacatatgagaaaaatggagcagcatgcttaagtgttctcacagatgcaa 56702

                         
Query: 415   aattctttcagg 426
             ||| ||||||||
Sbjct: 56701 aatactttcagg 56690



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 151/185 (81%)
 Strand = Plus / Minus

                                                                         
Query: 168   tggcagatgaaggagaaaatgcccttgtacaggctgaaaggcccgctggacaatgcgcct 227
             |||||||||||||||| || |||  |||||| |||||| || |||||||| ||||| |||
Sbjct: 57638 tggcagatgaaggagagaaggccactgtacatgctgaaggggccgctggagaatgctcct 57579

                                                                         
Query: 228   ccggccagggactttgttgctgcgctgaaagcatcgtacaatcggactgctctgcccgct 287
             ||||  ||||| || ||||  | | |||| || || |   ||||||||| |||||| |||
Sbjct: 57578 ccggtgagggatttcgttggggtgttgaaggcgtcttttgatcggactggtctgcctgct 57519

                                                                         
Query: 288   ctgattgcggaggtcaagaaggcttcaccaagccggggggttcttagggagaatttcgac 347
             |||||||| |||||||||||||||||||| ||||| || || || |||||| | ||||| 
Sbjct: 57518 ctgattgcagaggtcaagaaggcttcaccgagccgcggtgtcctgagggaggacttcgag 57459

                  
Query: 348   ccggt 352
             |||||
Sbjct: 57458 ccggt 57454



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                           
Query: 422   tcagggaagtttcgactacttggaggctatacgcaatgctggagta 467
             |||||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 56599 tcagggaagttttgactatttggatgctatacgcaatgctggagta 56554
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  174 bits (88), Expect = 2e-40
 Identities = 142/160 (88%)
 Strand = Plus / Minus

                                                                            
Query: 469      agtgtcctcttctgtgcaaagagttcatcattgatgcttggcagctttactatgcacggt 528
                |||||||||| |||||||||||||||||  ||||||| ||||| ||||||||||| || |
Sbjct: 23339122 agtgtcctctgctgtgcaaagagttcattgttgatgcctggcaactttactatgcgcgtt 23339063

                                                                            
Query: 529      ctaagggagcagatgctgttcttctgattgctgccatcttacctgatcgtgatatcagtt 588
                  ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||  |
Sbjct: 23339062 tgaagggagcagatgctgttcttctgattgctgctgtcttacctgatcttgatatcaagt 23339003

                                                        
Query: 589      atatgctgaaaatatgcaaaatactcgggatggcagcttt 628
                ||||| ||||||||||||||||||| || ||||| |||||
Sbjct: 23339002 atatgttgaaaatatgcaaaatacttggcatggctgcttt 23338963



 Score =  147 bits (74), Expect = 5e-32
 Identities = 125/142 (88%)
 Strand = Plus / Minus

                                                                            
Query: 16       tcgaggggctcgacgggataaagatccggaggcgcccggtcacgggcccgtccgtgcacc 75
                |||||||| | |||||||||| ||||||||||||||| || || || ||| | |||||| 
Sbjct: 23340612 tcgagggggttgacgggataaggatccggaggcgccccgtgaccgggccgccggtgcact 23340553

                                                                            
Query: 76       acgtgggccccttccagttccgcctcgagaacgaggggaacacgccgcgcaacatcctcg 135
                ||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 23340552 acgtggggccgttccagttccgcctcgagaacgaggggaacacgccgcggaacatcctcg 23340493

                                      
Query: 136      agaagattgtatggaacaagga 157
                ||| ||| || ||| |||||||
Sbjct: 23340492 agaggatcgtgtgggacaagga 23340471



 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Minus

                                                                            
Query: 355      agatcgcccaagcatacgagaaaaatggagcagcatgcttaagtgttcttacagattcaa 414
                ||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 23339440 agatcgcccaaacatatgagaaaaatggagcagcatgcttaagtgttctcacagatgcaa 23339381

                            
Query: 415      aattctttcagg 426
                ||| ||||||||
Sbjct: 23339380 aatactttcagg 23339369



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 151/185 (81%)
 Strand = Plus / Minus

                                                                            
Query: 168      tggcagatgaaggagaaaatgcccttgtacaggctgaaaggcccgctggacaatgcgcct 227
                |||||||||||||||| || |||  |||||| |||||| || |||||||| ||||| |||
Sbjct: 23340317 tggcagatgaaggagagaaggccactgtacatgctgaaggggccgctggagaatgctcct 23340258

                                                                            
Query: 228      ccggccagggactttgttgctgcgctgaaagcatcgtacaatcggactgctctgcccgct 287
                ||||  ||||| || ||||  | | |||| || || |   ||||||||| |||||| |||
Sbjct: 23340257 ccggtgagggatttcgttggggtgttgaaggcgtcttttgatcggactggtctgcctgct 23340198

                                                                            
Query: 288      ctgattgcggaggtcaagaaggcttcaccaagccggggggttcttagggagaatttcgac 347
                |||||||| |||||||||||||||||||| ||||| || || || |||||| | ||||| 
Sbjct: 23340197 ctgattgcagaggtcaagaaggcttcaccgagccgcggtgtcctgagggaggacttcgag 23340138

                     
Query: 348      ccggt 352
                |||||
Sbjct: 23340137 ccggt 23340133



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                              
Query: 422      tcagggaagtttcgactacttggaggctatacgcaatgctggagta 467
                |||||||||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 23339278 tcagggaagttttgactatttggatgctatacgcaatgctggagta 23339233
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>emb|CR938710.1| Medicago truncatula chromosome 5 clone mth2-170k9, COMPLETE SEQUENCE
          Length = 123977

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 89/105 (84%)
 Strand = Plus / Plus

                                                                         
Query: 481   tgtgcaaagagttcatcattgatgcttggcagctttactatgcacggtctaagggagcag 540
             |||||||||| |||||||| |||||||||||||| |||||||| || || || || ||||
Sbjct: 41339 tgtgcaaagaattcatcatagatgcttggcagctctactatgctcgatcgaaaggtgcag 41398

                                                          
Query: 541   atgctgttcttctgattgctgccatcttacctgatcgtgatatca 585
             |||| || ||||| ||||||||  | |||||||||| ||| ||||
Sbjct: 41399 atgcagtgcttctaattgctgctgttttacctgatcttgacatca 41443
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>gb|BT009598.1| Triticum aestivum clone wre1n.pk0075.b10:fis, full insert mRNA
           sequence
          Length = 1005

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 453 cgcaatgctggagtaaagtgtcctcttctgtgcaaagagttc 494
           ||||| || ||||| ||||| || ||||||||||||||||||
Sbjct: 316 cgcaaagcaggagttaagtgcccccttctgtgcaaagagttc 357



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 297 gaggtcaagaaggcttcaccaagccggggggttcttagggagaa 340
           |||||||||||||| ||||||||  |||| || || ||||||||
Sbjct: 160 gaggtcaagaaggcgtcaccaagtaggggcgtactcagggagaa 203
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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 339    aatttcgacccggtcgagatcgcccaagcatacg 372
              |||||||||||||| | |||||||||||| ||||
Sbjct: 719514 aatttcgacccggtggcgatcgcccaagcctacg 719481
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>ref|NM_126473.2| Arabidopsis thaliana indole-3-glycerol-phosphate synthase AT2G04400
           mRNA, complete cds
          Length = 1721

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 336 gagaatttcgacccggtcgagatcgcccaagcatacgagaaaaatggagcagcatgc 392
           |||||||| |||||||||||||| || ||||| || || |||   ||||||||||||
Sbjct: 638 gagaattttgacccggtcgagattgctcaagcttatgaaaaaggcggagcagcatgc 694
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>gb|AC165337.2| Mus musculus BAC clone RP24-356N8 from chromosome 12, complete sequence
          Length = 155881

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 373   agaaaaatggagcagcatgct 393
             |||||||||||||||||||||
Sbjct: 82279 agaaaaatggagcagcatgct 82259
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>ref|XM_450324.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1270

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 453 cgcaatgctggagtaaagtgtcctcttctgtgcaaagagtt 493
           |||||| | ||||||||||| |||||||| ||||| |||||
Sbjct: 704 cgcaattccggagtaaagtgccctcttctttgcaaggagtt 744
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>ref|XM_450323.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1419

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 453 cgcaatgctggagtaaagtgtcctcttctgtgcaaagagtt 493
           |||||| | ||||||||||| |||||||| ||||| |||||
Sbjct: 705 cgcaattccggagtaaagtgccctcttctttgcaaggagtt 745
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>gb|AC023946.5| Homo sapiens chromosome 11, clone RP11-567I13, complete sequence
          Length = 187380

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 404   tacagattcaaaattctttca 424
             |||||||||||||||||||||
Sbjct: 77451 tacagattcaaaattctttca 77431
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>gb|AC104031.6| Homo sapiens chromosome 11, clone RP11-483L5, complete sequence
          Length = 212779

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 404    tacagattcaaaattctttca 424
              |||||||||||||||||||||
Sbjct: 188386 tacagattcaaaattctttca 188366
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>gb|AY086973.1| Arabidopsis thaliana clone 3006 mRNA, complete sequence
          Length = 1379

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 336 gagaatttcgacccggtcgagatcgcccaagcatacgagaaaaatggagcagcatgc 392
           |||||||| |||||||||||||| || ||||| || || |||   ||||||||||||
Sbjct: 643 gagaattttgacccggtcgagattgctcaagcttatgaaaaaggcggagcagcatgc 699
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>dbj|AK117503.1| Arabidopsis thaliana At2g04400 mRNA for putative indole-3-glycerol
           phosphate synthase, complete cds, clone: RAFL17-14-C09
          Length = 1106

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 336 gagaatttcgacccggtcgagatcgcccaagcatacgagaaaaatggagcagcatgc 392
           |||||||| |||||||||||||| || ||||| || || |||   ||||||||||||
Sbjct: 330 gagaattttgacccggtcgagattgctcaagcttatgaaaaaggcggagcagcatgc 386
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>dbj|AK071383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092E01, full
           insert sequence
          Length = 1420

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 453 cgcaatgctggagtaaagtgtcctcttctgtgcaaagagtt 493
           |||||| | ||||||||||| |||||||| ||||| |||||
Sbjct: 705 cgcaattccggagtaaagtgccctcttctttgcaaggagtt 745
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>dbj|AK059358.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-D08, full
           insert sequence
          Length = 1270

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 453 cgcaatgctggagtaaagtgtcctcttctgtgcaaagagtt 493
           |||||| | ||||||||||| |||||||| ||||| |||||
Sbjct: 704 cgcaattccggagtaaagtgccctcttctttgcaaggagtt 744
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>gb|AC167706.2| Reniera sp. JGI-2005 clone JGIBAYC-9H10, complete sequence
          Length = 41616

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 166   tttggcagatgaaggagaaaa 186
             |||||||||||||||||||||
Sbjct: 27377 tttggcagatgaaggagaaaa 27397
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>gb|U18770.1|ATU18770 Arabidopsis thaliana indole-3-glycerol phosphate synthase mRNA,
           complete cds
          Length = 1362

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 336 gagaatttcgacccggtcgagatcgcccaagcatacgagaaaaatggagcagcatgc 392
           |||||||| |||||||||||||| || ||||| || || |||   ||||||||||||
Sbjct: 580 gagaattttgacccggtcgagattgctcaagcttatgaaaaaggcggagcagcatgc 636
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>gb|AY596295.1| Haloarcula marismortui ATCC 43049 plasmid pNG600, complete sequence
          Length = 155300

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    cgcctcgagaacgaggggaa 115
             ||||||||||||||||||||
Sbjct: 33511 cgcctcgagaacgaggggaa 33492
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 476      tcttctgtgcaaagagttca 495
                ||||||||||||||||||||
Sbjct: 14055268 tcttctgtgcaaagagttca 14055249
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>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0022F22, from chromosome 3, complete sequence
          Length = 144268

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   tcttctgtgcaaagagttca 495
             ||||||||||||||||||||
Sbjct: 64947 tcttctgtgcaaagagttca 64928
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>emb|X04960.1|BLTRP Brevibacterium lactofermentum tryptophan operon
          Length = 7725

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 480  ctgtgcaaagagttcatcattgat 503
            ||||||||||| ||||||||||||
Sbjct: 4296 ctgtgcaaagacttcatcattgat 4319
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>emb|BX927157.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5,
             complete genome; segment 10/10
          Length = 140057

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 480   ctgtgcaaagagttcatcattgat 503
             ||||||||||| ||||||||||||
Sbjct: 67649 ctgtgcaaagacttcatcattgat 67672
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>emb|AJ277855.1|RSO277855 Ralstonia solanacearum partial 16S rRNA gene and partial internal
           transcribed spacer 1 (ITS1), strain R780
          Length = 506

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   cgcaagcatcgaggggctcg 27
           ||||||||||||||||||||
Sbjct: 275 cgcaagcatcgaggggctcg 294
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>emb|AJ277851.1|RSO277851 Ralstonia solanacearum partial 16S rRNA gene and partial internal
           transcribed spacer 1 (ITS1), strain R223
          Length = 506

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 8   cgcaagcatcgaggggctcg 27
           ||||||||||||||||||||
Sbjct: 275 cgcaagcatcgaggggctcg 294
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>ref|XM_689696.1| PREDICTED: Danio rerio DGKI protein (DGKI), mRNA
          Length = 2304

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 465 gtaaagtgtcctcttctgtg 484
           ||||||||||||||||||||
Sbjct: 215 gtaaagtgtcctcttctgtg 196
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 476      tcttctgtgcaaagagttca 495
                ||||||||||||||||||||
Sbjct: 14050243 tcttctgtgcaaagagttca 14050224
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>emb|BX819822.1|CNS0A8JB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS31ZF12 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1346

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 336 gagaatttcgacccggtcgagatcgcccaagc 367
           |||||||| |||||||||||||| || |||||
Sbjct: 585 gagaattttgacccggtcgagattgctcaagc 616
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 480     ctgtgcaaagagttcatcattgat 503
               ||||||||||| ||||||||||||
Sbjct: 3236993 ctgtgcaaagacttcatcattgat 3237016
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>gb|AC021087.5| Homo sapiens chromosome 5 clone CTD-2083E4, complete sequence
          Length = 156677

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 537  gcagatgctgttcttctgat 556
            ||||||||||||||||||||
Sbjct: 8407 gcagatgctgttcttctgat 8426
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>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome
          Length = 1584804

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   gctgaaagcatcgtacaatc 270
             ||||||||||||||||||||
Sbjct: 77653 gctgaaagcatcgtacaatc 77634
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>emb|CR356225.5| Zebrafish DNA sequence from clone DKEY-210E9 in linkage group 7, complete
              sequence
          Length = 201825

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    gtaaagtgtcctcttctgtg 484
              ||||||||||||||||||||
Sbjct: 144846 gtaaagtgtcctcttctgtg 144865
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>emb|AL773533.12| Mouse DNA sequence from clone RP23-159H12 on chromosome 2, complete
              sequence
          Length = 137804

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 468    aagtgtcctcttctgtgcaa 487
              ||||||||||||||||||||
Sbjct: 125992 aagtgtcctcttctgtgcaa 126011
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>emb|AL669982.10| Mouse DNA sequence from clone RP23-297N24 on chromosome 4, complete
              sequence
          Length = 240125

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 373    agaaaaatggagcagcatgc 392
              ||||||||||||||||||||
Sbjct: 121331 agaaaaatggagcagcatgc 121312
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>dbj|AB032934.1| Vibrio alginolyticus pfsA, orfC, orfD genes for PF60 and hypothetical
            proteins, complete cds
          Length = 4547

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  gagatttggcagatgaagga 181
            ||||||||||||||||||||
Sbjct: 3401 gagatttggcagatgaagga 3420


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,609,532
Number of Sequences: 3902068
Number of extensions: 4609532
Number of successful extensions: 89991
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89831
Number of HSP's gapped (non-prelim): 159
length of query: 628
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 605
effective length of database: 17,143,297,704
effective search space: 10371695110920
effective search space used: 10371695110920
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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