ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal29h18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 862 bits (435), Expect = 0.0 Identities = 488/500 (97%), Gaps = 7/500 (1%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct: 26 ggcccccaccgtgatggcctcatcggcaacctccgtcgctcctttccaggggctcaagtc 85 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggc-agcgtcagca 117 ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 86 caccgccggccttcccgtcagccgccgctccaacg---ctagc-tcggccagcgtcagca 141 Query: 118 acggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgaga 177 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 acggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgaga 201 Query: 178 ccctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctga 237 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 ccctgtcttaccttccaccactcagcacggaggccctccttaagcaggtcgactacctga 261 Query: 238 tccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagc 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 tccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagc 321 Query: 298 acaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgt 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 322 acaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgt 381 Query: 358 tcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtacc 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 tcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtacc 441 Query: 418 ctgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagct 477 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 ctgacgcgtatgtccgcatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagct 501 Query: 478 tcatcgccttcaagccacca 497 ||||||| |||||||||||| Sbjct: 502 tcatcgctttcaagccacca 521
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 854 bits (431), Expect = 0.0 Identities = 483/498 (96%), Gaps = 2/498 (0%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 |||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||||||| Sbjct: 89 ggcccctaccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaagtc 148 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 caccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 208 Query: 119 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 268 Query: 179 cctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgat 238 |||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||||| Sbjct: 269 cctgtcttacttgccaccgctcaccacggaggccctcctcaagcaggtcgactacctgat 328 Query: 239 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 329 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 388 Query: 299 caacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 caacgcgtctcccgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 448 Query: 359 cggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccc 418 ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 449 cgggtgcaccgacgccacacaggtgatcaacgaggtggaggaggtcaagaaggagtaccc 508 Query: 419 tgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagctt 478 ||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 509 tgacgcgtacgtccgcatcatcggattcgacaacatgcgccaggtgcagtgcgtcagctt 568 Query: 479 catcgccttcaagccacc 496 |||||||||||||||||| Sbjct: 569 catcgccttcaagccacc 586
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 728 bits (367), Expect = 0.0 Identities = 467/498 (93%), Gaps = 2/498 (0%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||| Sbjct: 49 ggcccccaccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaagtc 108 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109 caccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 168 Query: 119 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 178 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 169 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggtatcaagaagttcgagac 228 Query: 179 cctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgat 238 |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 229 cctgtcctacttgccaccgctcagcacggagggcctccttaagcaggtcgactacctgat 288 Query: 239 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 298 |||||||||||||||||| ||||||||||| || ||||||||||||||||||||||| || Sbjct: 289 ccgctccaagtgggtgccctgcctcgagtttagaaaggttgggttcatcttccgtgaaca 348 Query: 299 caacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 ||||| ||| |||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 349 caacgtatcccctgggtactacgatggccggtactggacaatgtggaaactccctatgtt 408 Query: 359 cggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccc 418 ||||||| ||| | |||| |||||| || ||||||||||||||||| |||||||||||| Sbjct: 409 cggatgccccgcccccacccaggtgatccccgaggtggaggaggtcaggaaggagtaccc 468 Query: 419 tgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagctt 478 |||| | ||| ||| |||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 469 tgacccctattgccgcatcatcggattcgacaacatgcgtcaggtgcagtccgtcagctt 528 Query: 479 catcgccttcaagccacc 496 |||||||| ||||||||| Sbjct: 529 catcgcctccaagccacc 546
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 648 bits (327), Expect = 0.0 Identities = 350/358 (97%) Strand = Plus / Plus Query: 139 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccac 198 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct: 354 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacctgccaccgc 413 Query: 199 tcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcctt 258 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 414 tcagcacggaggccctcctcaagcaggtcgactacctgatccgctccaagtgggtgcctt 473 Query: 259 gcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtact 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 gcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtact 533 Query: 319 acgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacac 378 ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 534 acgatggccggtattggacaatgtggaagctgcctatgttcgggtgcactgacgccacac 593 Query: 379 aggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatca 438 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 594 aggtgatcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatca 653 Query: 439 tcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 tcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 711 Score = 236 bits (119), Expect = 6e-59 Identities = 142/147 (96%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||||||||| Sbjct: 3 ggcccccgccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaagtc 62 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 caccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 122 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||||||||||| Sbjct: 123 cggtggaaggatcaggtgcatgcaggt 149
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 609 bits (307), Expect = e-171 Identities = 345/358 (96%) Strand = Plus / Plus Query: 139 tgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccac 198 ||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||| | Sbjct: 268 tgcaggtgtggcccatcgagggcattaagaagttcgagaccctgtcctacctgccaccgc 327 Query: 199 tcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcctt 258 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 328 tcagcacagaggccctcctcaagcaggtcgactacctgatccgctccaagtgggtgcctt 387 Query: 259 gcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtact 318 ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 388 gcctcgagttcagcaaggttgggtttatcttccgtgagcacaacgcatcccctgggtact 447 Query: 319 acgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacac 378 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 448 acgatggccggtactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgc 507 Query: 379 aggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatca 438 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 508 aggtgatcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatca 567 Query: 439 tcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 568 tcggattcgacaacatgcgccaggtgcagtgcgtcagcttcatcgccttcaagccacc 625 Score = 228 bits (115), Expect = 1e-56 Identities = 141/147 (95%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||||||||| Sbjct: 3 ggcccccgccgtgatggcctcgtcggccacctccgtcgctcctttccaggggctcaagtc 62 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 caccgccggcctccccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 122 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 |||||||||||||||| |||||||||| Sbjct: 123 cggtggaaggatcaggcgcatgcaggt 149
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 593 bits (299), Expect = e-166 Identities = 418/458 (91%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| |||||||||||||| ||||||||||| |||||| ||||||||||| | |||| Sbjct: 111 ccttccaggggctcaagtcgaccgccggcctccccgtcggccgccgctccggcagcgccg 170 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 ||||| |||||||||||||||| ||||||||||| ||||||||||||||||| || |||| Sbjct: 171 gcctcagcagcgtcagcaacggcggaaggatcagatgcatgcaggtgtggccaattgagg 230 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| | Sbjct: 231 gcatcaagaagttcgagaccctgtcttacttgccacccctctccacggaggccctcctga 290 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 291 agcaggtcgactacctgatccgctccaagtgggtgccctgcctcgagttcagcaaggttg 350 Query: 280 ggttcatcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaa 339 | ||| ||||||||||||||||| || || ||||||||||| || || |||||||||| Sbjct: 351 gcttcgtcttccgtgagcacaacaactcccccgggtactacgacggtcgatactggacaa 410 Query: 340 tgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggagg 399 |||||||| ||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct: 411 tgtggaagttgcctatgttcgggtgcaccgacgccacgcaggtgctcaatgaggtggagg 470 Query: 400 aggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgtc 459 ||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||| | Sbjct: 471 aggtcaagaaggagtaccctgacgcctatgtccgcgtcatcggcttcgacaacatgcgcc 530 Query: 460 aggtgcagtgcgtcagcttcatcgccttcaagccacca 497 |||||||||||||||||||||| ||||||| ||||||| Sbjct: 531 aggtgcagtgcgtcagcttcattgccttcaggccacca 568
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 581 bits (293), Expect = e-163 Identities = 441/488 (90%), Gaps = 2/488 (0%) Strand = Plus / Plus Query: 11 gtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccaccgccggc 68 |||||||| || |||||| |||||||||| || ||| |||| |||||||| |||| |||| Sbjct: 3 gtgatggcttcctcggccacctccgtcgcacccttccagggtctcaagtcgaccgacggc 62 Query: 69 cttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaagg 128 || ||| ||||||||||||||| | |||| ||||| |||||||||||||||| |||||| Sbjct: 63 ctgcccatcagccgccgctccagcagcgccggcctcagcagcgtcagcaacggcggaagg 122 Query: 129 atcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttac 188 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 123 atcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttac 182 Query: 189 ttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaag 248 ||||||| ||| ||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct: 183 ctgccacccctctccacggaggccctcctgaagcaggtcgactacttgatccgctccaag 242 Query: 249 tgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatct 308 |||||||| ||||||||||||||||||||||| ||| |||||||||||||||| || Sbjct: 243 tgggtgccctgcctcgagttcagcaaggttggtttcgtcttccgtgagcacaatagctcc 302 Query: 309 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 368 || || ||||| || || || |||||||||||||||||||||||||||||||| |||||| Sbjct: 303 cccggatactatgacggtcgatactggacaatgtggaagctgcctatgttcgggtgcacc 362 Query: 369 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 363 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctat 422 Query: 429 gtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 488 ||||| ||||||| ||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 423 gtccgcgtcatcggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttc 482 Query: 489 aagccacc 496 | |||||| Sbjct: 483 aggccacc 490
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 561 bits (283), Expect = e-157 Identities = 414/458 (90%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| |||||||||||||| ||||||||||| ||| ||||| |||||||| | || | Sbjct: 101 ccttccaggggctcaagtcgaccgccggcctccccatcagctgccgctccggcagcaccg 160 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 ||||| ||||||||||||| || ||||||||||| ||||||||||||||||| || |||| Sbjct: 161 gcctcagcagcgtcagcaatggcggaaggatcagatgcatgcaggtgtggccaattgagg 220 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | | Sbjct: 221 gcatcaagaagttcgagaccctgtcttacttgccacccctctccacggaggccctcttga 280 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 281 agcaggtcgactacttgatccgctccaagtgggtgccctgcctcgagttcagcaaggttg 340 Query: 280 ggttcatcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaa 339 | ||| ||||||||||||||||| || || ||||||||||| || || |||||||||| Sbjct: 341 gcttcgtcttccgtgagcacaacagctcccccgggtactacgacggtcgatactggacaa 400 Query: 340 tgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggagg 399 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 401 tgtggaagctgcctatgttcgggtgcaccgacgccacacaggtgctcaacgaggtggagg 460 Query: 400 aggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgtc 459 |||| ||||||||||||||||| ||||||||||| ||||||| |||||||||||||| | Sbjct: 461 aggttaagaaggagtaccctgatgcgtatgtccgcgtcatcggtttcgacaacatgcgcc 520 Query: 460 aggtgcagtgcgtcagcttcatcgccttcaagccacca 497 ||||||| |||||||||||||| ||||||| ||||||| Sbjct: 521 aggtgcaatgcgtcagcttcattgccttcaggccacca 558
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 509 bits (257), Expect = e-141 Identities = 410/458 (89%), Gaps = 5/458 (1%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| |||| |||||||||||| || ||||||||||||||||||||| ||||| || Sbjct: 32 ccttccaggagctcaagtccactgctggccttcccgtcagccgccgcagcaacgccg--- 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 |||| ||||||||||||||||||||||| ||| | ||||||||||||||||| || |||| Sbjct: 89 gccttggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgagg 148 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | Sbjct: 149 gcatcaagaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctga 208 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 ||||| |||||| | ||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 209 agcagatcgacttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttg 268 Query: 280 ggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggaca 338 | ||||||||||| |||||| | ||| |||| || |||||||| ||| ||||||||||| Sbjct: 269 gcttcatcttccgcgagcacggcagca-ctcccggatactacgacggcaggtactggaca 327 Query: 339 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 398 |||||||||||||| |||||||| |||||||||||| |||||||| |||| ||||||||| Sbjct: 328 atgtggaagctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggtggag 387 Query: 399 gaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgt 458 |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 388 gaggtcaagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgt 447 Query: 459 caggtgcagtgcgtcagcttcatcgccttcaagccacc 496 |||||||||||||||||||||||||||||||||||||| Sbjct: 448 caggtgcagtgcgtcagcttcatcgccttcaagccacc 485
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 509 bits (257), Expect = e-141 Identities = 410/458 (89%), Gaps = 5/458 (1%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| |||| |||||||||||| || ||||||||||||||||||||| ||||| || Sbjct: 32 ccttccaggagctcaagtccactgctggccttcccgtcagccgccgcagcaacgccg--- 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 |||| ||||||||||||||||||||||| ||| | ||||||||||||||||| || |||| Sbjct: 89 gccttggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgagg 148 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | Sbjct: 149 gcatcaagaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctga 208 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 ||||| |||||| | ||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 209 agcagatcgacttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttg 268 Query: 280 ggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggaca 338 | ||||||||||| |||||| | ||| |||| || |||||||| ||| ||||||||||| Sbjct: 269 gcttcatcttccgcgagcacggcagca-ctcccggatactacgacggcaggtactggaca 327 Query: 339 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 398 |||||||||||||| |||||||| |||||||||||| |||||||| |||| ||||||||| Sbjct: 328 atgtggaagctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggtggag 387 Query: 399 gaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgt 458 |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 388 gaggtcaagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgt 447 Query: 459 caggtgcagtgcgtcagcttcatcgccttcaagccacc 496 |||||||||||||||||||||||||||||||||||||| Sbjct: 448 caggtgcagtgcgtcagcttcatcgccttcaagccacc 485
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 509 bits (257), Expect = e-141 Identities = 410/458 (89%), Gaps = 5/458 (1%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| || ||||||||||||||||||||| ||||| || Sbjct: 32 ccttccaggggctcaagtccactgctggccttcccgtcagccgccgcagcaacgccg--- 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 |||| ||||||||||||||||||||||| ||| | ||||||||||||||||| || |||| Sbjct: 89 gccttggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggcctattgagg 148 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| | Sbjct: 149 gcatcaagaagttcgagaccctgtcttacctgccaccactcacagaggaggccctcctga 208 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 ||||| |||||| | ||||||||||||||||||| |||||||||||||||||| | | || Sbjct: 209 agcagatcgacttcttgatccgctccaagtgggttccttgcctcgagttcagccaaggtg 268 Query: 280 ggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggaca 338 | ||||||||||| |||||| | ||| ||||||| ||||| || ||| ||||||||||| Sbjct: 269 gcttcatcttccgcgagcacggcagca-ctcctggatactatgacggcaggtactggaca 327 Query: 339 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 398 ||||||||||| || ||||||||||||||||||||| | |||||| |||| ||||||||| Sbjct: 328 atgtggaagctccccatgttcggatgcaccgacgcctcccaggtgatcaaggaggtggag 387 Query: 399 gaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgt 458 |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 388 gaggtcaagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgt 447 Query: 459 caggtgcagtgcgtcagcttcatcgccttcaagccacc 496 |||||||||||||||||||||||||||||||||||||| Sbjct: 448 caggtgcagtgcgtcagcttcatcgccttcaagccacc 485
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 509 bits (257), Expect = e-141 Identities = 331/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 356 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 416 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 536 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 592 Score = 127 bits (64), Expect = 4e-26 Identities = 96/106 (90%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 509 bits (257), Expect = e-141 Identities = 331/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 | ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 accacggaggccctcctgaagcaggttgactacctgatccgctccaagtgggtgccctgc 357 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 gacggccgatactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 477 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||||| |||||||||||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 478 gtgcttaacgaggtggaggaggtcaagaaggagtaccctgacgcttacgtccgtatcatc 537 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 538 ggcttcgacaacctgcggcaggtgcagtgcgtcagcttcatcgccttcaggccacc 593 Score = 127 bits (64), Expect = 4e-26 Identities = 96/106 (90%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctccccgtcagccgccgctcca---gcgcca 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 504 bits (254), Expect = e-139 Identities = 410/459 (89%), Gaps = 5/459 (1%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| || ||||||||||||||||||||| ||||| || Sbjct: 32 ccttccaggggctcaagtccactgctggccttcccgtcagccgccgcagcaacgccg--- 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 |||| ||||||||||||||||||||||| ||| | ||||||||||||||||| || |||| Sbjct: 89 gccttggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgagg 148 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | Sbjct: 149 gcatcaagaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctga 208 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 ||||| |||||| | ||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 209 agcagatcgacttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttg 268 Query: 280 ggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggaca 338 | ||||||||||| ||| || | ||| |||| || |||||||| ||| ||||||||||| Sbjct: 269 gcttcatcttccgcgagtacggcagca-ctcccggatactacgacggcaggtactggaca 327 Query: 339 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 398 |||||||||||||| |||||||| |||||||||||| |||||||| |||| ||||||||| Sbjct: 328 atgtggaagctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggtggag 387 Query: 399 gaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgt 458 |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 388 gaggtcaagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgt 447 Query: 459 caggtgcagtgcgtcagcttcatcgccttcaagccacca 497 ||||||||||| ||||||||||||||||||||||||||| Sbjct: 448 caggtgcagtgtgtcagcttcatcgccttcaagccacca 486
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 502 bits (253), Expect = e-139 Identities = 275/281 (97%), Gaps = 1/281 (0%) Strand = Plus / Plus Query: 33 cgtcgctcctttc-aggggctcaagtccaccgccggccttcccgtcagccgccgctccaa 91 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1 cgtcgctcctttccaggggctcaagtccaccgccggcctccccgtcagccgccgctccaa 60 Query: 92 cggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcc 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcc 120 Query: 152 catcgagggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggc 211 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 121 catcgagggcatcaagaagttcgagaccctgtcttacctgccaccgctcagcacggaggc 180 Query: 212 cctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcag 271 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cctcctcaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcag 240 Query: 272 caaggttgggttcatcttccgtgagcacaacgcatctcctg 312 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 241 caaggttgggttcatcttccgtgagcacaacgcatcacctg 281 Score = 206 bits (104), Expect = 5e-50 Identities = 106/107 (99%) Strand = Plus / Plus Query: 390 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgac 449 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 359 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcatcatcggattcgac 418 Query: 450 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 419 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 465
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 502 bits (253), Expect = e-139 Identities = 435/490 (88%), Gaps = 7/490 (1%) Strand = Plus / Plus Query: 11 gtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccaccgccggc 68 |||||||| || |||||| |||||||||| || ||| |||| |||||||||||||| ||| Sbjct: 1 gtgatggcttcttcggccacctccgtcgcgcccttccagggcctcaagtccaccgctggc 60 Query: 69 cttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaagg 128 || ||||||||||||||| ||| | || |||||||||||||||||||||| |||||| Sbjct: 61 ctccccgtcagccgccgcagcaatgccg---gcctcggcagcgtcagcaacggcggaagg 117 Query: 129 atcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttac 188 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 118 atcaggtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccctgtcttac 177 Query: 189 ttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaag 248 |||||||||| |||||||||||| |||||| |||||| | |||||||||||||| Sbjct: 178 ctgccaccactgtcagaggaggccctcctgaagcagatcgacttcttgatccgctccaag 237 Query: 249 tgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatc 307 ||||| || ||||||||||||||||||||||| ||||||||||| |||||| | ||| | Sbjct: 238 tgggttccctgcctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-c 296 Query: 308 tcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 367 ||| || |||||||| ||| ||||||||||||||||||||||||| |||||||| ||||| Sbjct: 297 tcccggatactacgacggcaggtactggacaatgtggaagctgcccatgttcggctgcac 356 Query: 368 cgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgta 427 |||||| |||||||| |||| ||||||||||||||||||||||||||||||||||| || Sbjct: 357 tgacgcctcacaggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgccta 416 Query: 428 tgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgcctt 487 ||| || |||||||| ||||||||||| ||||| ||||||||||||||||||||||| || Sbjct: 417 tgttcgcatcatcggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgcatt 476 Query: 488 caagccacca 497 |||||||||| Sbjct: 477 caagccacca 486
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 502 bits (253), Expect = e-139 Identities = 409/458 (89%), Gaps = 5/458 (1%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| || ||||||||||||||||||||| ||||| || Sbjct: 32 ccttccaggggctcaagtccactgctggccttcccgtcagccgccgcagcaacgccg--- 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 |||| ||||||||||||||||||||||| ||| | ||||||||||||||||| || |||| Sbjct: 89 gccttggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggcctattgagg 148 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 ||||||||||||||||||||||||||||| |||| |||||| |||||||||||| | Sbjct: 149 gcatcaagaagttcgagaccctgtcttacctgccgccactctcagaggaggccctcctga 208 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 ||||| |||||| | ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 209 agcagatcgacttcttgatccgctccaagtgggttccttgcctcgagttcagcaaggttg 268 Query: 280 ggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggaca 338 | ||||||||||| |||||| | ||| |||| || |||||||| ||| ||||||||||| Sbjct: 269 gcttcatcttccgcgagcacggcagca-ctcccggatactacgacggcaggtactggaca 327 Query: 339 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 398 |||||||||||||| |||||||| |||||||||||| |||||||| |||| ||||| ||| Sbjct: 328 atgtggaagctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggttgag 387 Query: 399 gaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgt 458 |||||||||||||||||||||||||| ||||| || |||||||| ||||||||||| ||| Sbjct: 388 gaggtcaagaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgt 447 Query: 459 caggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||||||||||||||||||||||||||||| Sbjct: 448 caagtgcagtgcgtcagcttcatcgccttcaagccacc 485
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 502 bits (253), Expect = e-139 Identities = 330/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 422 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 481 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 482 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 541 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 542 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 601 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 602 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccactcag 661 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 662 gtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 721 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 722 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 777 Score = 127 bits (64), Expect = 4e-26 Identities = 96/106 (90%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacggccggtctccccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 502 bits (253), Expect = e-139 Identities = 330/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 540 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 599 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 600 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 659 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 660 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 719 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 720 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 775 Score = 135 bits (68), Expect = 2e-28 Identities = 97/106 (91%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| |||||||| ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggcctgcccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 502 bits (253), Expect = e-139 Identities = 330/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || |||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 361 caggtgtggccaattgagggcatcaagaagttcgagaccctatcttacttgccacccctc 420 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 421 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 480 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || ||||| ||||| Sbjct: 481 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccctggttactat 540 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 541 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 600 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 601 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgcgtcatc 660 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 661 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 716 Score = 127 bits (64), Expect = 4e-26 Identities = 96/106 (90%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 502 bits (253), Expect = e-139 Identities = 330/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 485 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 544 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || || |||||| Sbjct: 545 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggatactac 604 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 605 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 664 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 665 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 724 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 725 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 780 Score = 111 bits (56), Expect = 2e-21 Identities = 120/138 (86%), Gaps = 5/138 (3%) Strand = Plus / Plus Query: 10 cgtgatggcctcatcggc-ccctccgtcgc-tcctttcaggggctcaagtccaccgccgg 67 |||||||||||| ||||| || ||||||| |||| |||||||||||||| || ||||| Sbjct: 1 cgtgatggcctcgtcggctaccaccgtcgcacccttccaggggctcaagtcgacagccgg 60 Query: 68 ccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaag 127 || ||||||||||||||||||| |||| |||||||||||||||||||| || ||||| Sbjct: 61 tctccccgtcagccgccgctcca---gcgccagcctcggcagcgtcagcaatggcggaag 117 Query: 128 gatcaggtgcatgcaggt 145 |||||||| ||||||||| Sbjct: 118 gatcaggtacatgcaggt 135
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 502 bits (253), Expect = e-139 Identities = 330/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 425 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 484 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 485 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 544 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || || |||||| Sbjct: 545 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggatactac 604 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 605 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 664 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 665 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 724 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 725 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 780 Score = 119 bits (60), Expect = 9e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| |||||||||||||| || ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtcgacagccggtctccccgtcagccgccgctcca---gcgcca 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 502 bits (253), Expect = e-139 Identities = 330/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 417 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 476 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||| ||||||||||| |||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 477 tccaccgaggccctcctgaagcagatcgactacttgatccgctccaagtgggtgccgtgc 536 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||| Sbjct: 537 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaatgcatctcctggatactac 596 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 |||||||| |||||||||||||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 597 gatggccgttactggacaatgtggaagttgcctatgttcggatgcaccgatgcctcacag 656 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||| |||| ||| ||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 657 gtgatcaaggagctggaggaggtcaagaaggagtaccctgacgcctatgtccgcatcatc 716 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggtttcgataacttgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 772 Score = 117 bits (59), Expect = 4e-23 Identities = 94/106 (88%), Gaps = 6/106 (5%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||| |||||||||||||||||||| ||||||||||||||||||| || Sbjct: 33 ccttccagggtctcaagtccaccgccggcctgcccgtcagccgccgctcca------ctg 86 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 87 gcctcggcagcgtcagcagcggcggaaggatcaggtgcatgcaggt 132
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 496 bits (250), Expect = e-137 Identities = 330/357 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 240 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 299 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 300 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 359 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 360 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 419 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 420 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 479 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 480 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 539 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 || ||||||||| |||| ||||||||||||||||||||||||||||| | ||||||| Sbjct: 540 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcctttaggccacca 596 Score = 127 bits (64), Expect = 4e-26 Identities = 96/106 (90%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 496 bits (250), Expect = e-137 Identities = 330/357 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacca 593 Score = 111 bits (56), Expect = 2e-21 Identities = 88/98 (89%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 48 gggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctcggc 107 |||||||||||||| ||||| || ||||||||||||||||||| |||| ||||||||| Sbjct: 41 gggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcggc 97 Query: 108 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||||| || ||||||||||||||||||||||| Sbjct: 98 cgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 496 bits (250), Expect = e-137 Identities = 330/357 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacca 593 Score = 111 bits (56), Expect = 2e-21 Identities = 88/98 (89%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 48 gggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctcggc 107 |||||||||||||| ||||| || ||||||||||||||||||| |||| ||||||||| Sbjct: 41 gggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcggc 97 Query: 108 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||||| || ||||||||||||||||||||||| Sbjct: 98 cgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 494 bits (249), Expect = e-136 Identities = 408/458 (89%), Gaps = 5/458 (1%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| || ||||||||||||||||||||| ||||| || Sbjct: 32 ccttccaggggctcaagtccactgctggccttcccgtcagccgccgcagcaacgccg--- 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 |||| ||||||||||||||||||||||| ||| | ||||||||||||||||| || |||| Sbjct: 89 gccttggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggcctattgagg 148 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 |||||||||| |||||||||||||||||| |||||||||||| |||||||||||| | Sbjct: 149 gcatcaagaaattcgagaccctgtcttacctgccaccactcacagaggaggccctcctga 208 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 ||||| |||||| | ||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 209 agcagatcgacttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttg 268 Query: 280 ggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggaca 338 | ||||||||||| |||||| | ||| ||||||| ||||| || ||| ||||||||||| Sbjct: 269 gcttcatcttccgcgagcacggcagca-ctcctggatactatgacggcaggtactggaca 327 Query: 339 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 398 |||||||||||||| |||||||| |||||||||||| |||||||| |||| ||||||||| Sbjct: 328 atgtggaagctgcccatgttcgggtgcaccgacgcctcacaggtgatcaaggaggtggag 387 Query: 399 gaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgt 458 ||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||| ||| Sbjct: 388 gaggtcaagaaagagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgt 447 Query: 459 caggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || |||||||||||||| |||||||||||||||||||| Sbjct: 448 caagtgcagtgcgtcagtttcatcgccttcaagccacc 485
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 494 bits (249), Expect = e-136 Identities = 408/458 (89%), Gaps = 5/458 (1%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||| |||||||||||||| ||||| ||||||||||||||| ||| | || Sbjct: 32 ccttccagggcctcaagtccaccgctggcctccccgtcagccgccgcagcaatgccg--- 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 |||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct: 89 gcctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggtgtggccgattgagg 148 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 |||||||||||||||||||||| |||||||||||||||||| |||||||||||| | Sbjct: 149 gcatcaagaagttcgagaccctttcttacttgccaccactctcggaggaggccctcctga 208 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 ||||| |||||| | ||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 209 agcagatcgacttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttg 268 Query: 280 ggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggaca 338 | ||||||||||| |||||| | ||| |||| || |||||||| ||| ||||||||||| Sbjct: 269 gcttcatcttccgcgagcacggcagca-ctcccggatactacgacggcaggtactggaca 327 Query: 339 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 398 |||||||||||||| |||||||| |||||||||||| ||||||| |||| ||||||||| Sbjct: 328 atgtggaagctgcccatgttcggctgcaccgacgcctcacaggtcatcaaggaggtggag 387 Query: 399 gaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgt 458 |||||||||||| ||||||||||||| ||||| || |||||||| |||| |||||| ||| Sbjct: 388 gaggtcaagaagaagtaccctgacgcctatgttcgcatcatcggcttcgtcaacatccgt 447 Query: 459 caggtgcagtgcgtcagcttcatcgccttcaagccacc 496 |||||||||||||||||||||||||||||||||||||| Sbjct: 448 caggtgcagtgcgtcagcttcatcgccttcaagccacc 485
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 494 bits (249), Expect = e-136 Identities = 408/458 (89%), Gaps = 5/458 (1%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||| |||||||||||||| ||||| ||||||||||||||| ||| | || Sbjct: 32 ccttccagggcctcaagtccaccgctggcctccccgtcagccgccgcagcaatgccg--- 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 |||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct: 89 gcctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggtgtggccgattgagg 148 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 |||||||||||||||||||||| |||||||||||||||||| |||||||||||| | Sbjct: 149 gcatcaagaagttcgagaccctttcttacttgccaccactctcggaggaggccctcctga 208 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 ||||| |||||| | ||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 209 agcagatcgacttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttg 268 Query: 280 ggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggaca 338 | ||||||||||| |||||| | ||| |||| || |||||||| ||| ||||||||||| Sbjct: 269 gcttcatcttccgcgagcacggcagca-ctcccggatactacgacggcaggtactggaca 327 Query: 339 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 398 |||||||||||||| |||||||| |||||||||||| ||||||| |||| ||||||||| Sbjct: 328 atgtggaagctgcccatgttcggctgcaccgacgcctcacaggtcatcaaggaggtggag 387 Query: 399 gaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgt 458 |||||||||||| ||||||||||||| ||||| || |||||||| |||| |||||| ||| Sbjct: 388 gaggtcaagaagaagtaccctgacgcctatgttcgcatcatcggcttcgtcaacatccgt 447 Query: 459 caggtgcagtgcgtcagcttcatcgccttcaagccacc 496 |||||||||||||||||||||||||||||||||||||| Sbjct: 448 caggtgcagtgcgtcagcttcatcgccttcaagccacc 485
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 494 bits (249), Expect = e-136 Identities = 329/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| |||||||||||||| || || || ||||||||| Sbjct: 540 ctcgagttcagcaaggttggcttcgtcttccgtgagcactacagctcccccgggtactac 599 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 600 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 659 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 660 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 719 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 720 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 775 Score = 135 bits (68), Expect = 2e-28 Identities = 97/106 (91%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| |||||||| ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggcctgcccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 494 bits (249), Expect = e-136 Identities = 329/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 420 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 479 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 480 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 539 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 540 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 599 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 600 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 659 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||||||| ||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 660 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgatgcctatgtccgtgtcatc 719 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 720 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 775 Score = 127 bits (64), Expect = 4e-26 Identities = 96/106 (90%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctccccgtcagccgccgctcca---gcgcca 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 494 bits (249), Expect = e-136 Identities = 329/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 244 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 303 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 304 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 363 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 364 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 423 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 424 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 483 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 484 gtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 543 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||||||||||||||||||||||||||||||||| | |||||| Sbjct: 544 ggcttcgacaacctgcgtcaggtgcagtgcgtcagcttcatcgcctttaggccacc 599 Score = 119 bits (60), Expect = 9e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 488 bits (246), Expect = e-135 Identities = 296/313 (94%) Strand = Plus / Plus Query: 184 cttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgct 243 ||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 2 cttacctgccaccgctcagcacggaggccctcctcaagcaggtggactacctgatccgct 61 Query: 244 ccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacg 303 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| | Sbjct: 62 ccaagtgggtgccttgccttgagttcagcaaggtcgggttcatcttccgtgagcacaatg 121 Query: 304 catctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggat 363 | ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| | Sbjct: 122 cgtctcccgggtactacgacggccgctactggacaatgtggaagctgcctatgttcgggt 181 Query: 364 gcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacg 423 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gcaccgacgccacacaggtgatcaacgaggtggaggaggtcaagaaggagtaccctgacg 241 Query: 424 cgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcg 483 |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 242 cgtacgtccgcatcatcggattcgacaacatgcgccaggtgcagtgcgtcagcttcattg 301 Query: 484 ccttcaagccacc 496 ||||||||||||| Sbjct: 302 ccttcaagccacc 314
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 488 bits (246), Expect = e-135 Identities = 408/459 (88%), Gaps = 5/459 (1%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||| |||||||||||||| ||||| ||||||||||||||| ||| | || Sbjct: 32 ccttccagggcctcaagtccaccgctggcctccccgtcagccgccgcagcaatgccg--- 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 |||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct: 89 gcctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggtgtggccaattgagg 148 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 ||||||||||||||||||||||||||||| |||||||||| |||||||||||| | Sbjct: 149 gcatcaagaagttcgagaccctgtcttacctgccaccactgtcagaggaggccctcctga 208 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 ||||| |||||| | ||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 209 agcagatcgacttcttgatccgctccaagtgggttccctgcctcgagttcagcaaggttg 268 Query: 280 ggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggaca 338 | ||||||||||| |||||| | ||| |||| || |||||||| ||| ||||||||||| Sbjct: 269 gcttcatcttccgcgagcacggcagca-ctcccggatactacgacggcaggtactggaca 327 Query: 339 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 398 |||||||||||||| |||||||| ||||| |||||| |||||||| ||| ||||||||| Sbjct: 328 atgtggaagctgcccatgttcggctgcactgacgcctcacaggtgatcagggaggtggag 387 Query: 399 gaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgt 458 |||||||||||||||||||||||||| ||||| || |||||||| ||||||||||| ||| Sbjct: 388 gaggtcaagaaggagtaccctgacgcctatgttcgcatcatcggcttcgacaacatccgt 447 Query: 459 caggtgcagtgcgtcagcttcatcgccttcaagccacca 497 || ||||||||||||||||||||||| |||||||||||| Sbjct: 448 caagtgcagtgcgtcagcttcatcgcattcaagccacca 486
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 488 bits (246), Expect = e-135 Identities = 329/357 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||||||| |||||||||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtactctgacgcctatgtccgtgtcatc 536 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacca 593 Score = 111 bits (56), Expect = 2e-21 Identities = 88/98 (89%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 48 gggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctcggc 107 |||||||||||||| ||||| || ||||||||||||||||||| |||| ||||||||| Sbjct: 41 gggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcggc 97 Query: 108 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||||| || ||||||||||||||||||||||| Sbjct: 98 cgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 488 bits (246), Expect = e-135 Identities = 329/357 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 || ||||||||| |||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagtttcatcgccttcaggccacca 593 Score = 111 bits (56), Expect = 2e-21 Identities = 88/98 (89%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 48 gggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctcggc 107 |||||||||||||| ||||| || ||||||||||||||||||| |||| ||||||||| Sbjct: 41 gggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcggc 97 Query: 108 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||||| || ||||||||||||||||||||||| Sbjct: 98 cgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 488 bits (246), Expect = e-135 Identities = 329/357 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 416 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 417 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 476 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 || ||||||||| |||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 537 ggcttcgacaacctgcgccaggtgcagtgcgtcagtttcatcgccttcaggccacca 593 Score = 111 bits (56), Expect = 2e-21 Identities = 88/98 (89%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 48 gggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctcggc 107 |||||||||||||| ||||| || ||||||||||||||||||| |||| ||||||||| Sbjct: 41 gggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcggc 97 Query: 108 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||||| || ||||||||||||||||||||||| Sbjct: 98 cgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 488 bits (246), Expect = e-135 Identities = 331/357 (92%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 880 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 939 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 940 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 999 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 319 |||||||||||||||||||| ||| ||||||||||||||||| || |||| |||||||| Sbjct: 1000 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcctcc-gggtacta 1058 Query: 320 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 379 ||| || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 1059 cgacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgca 1118 Query: 380 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcat 439 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 1119 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcat 1178 Query: 440 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 ||| ||||||||| |||| |||||||||||||||||||||||||| |||| |||||| Sbjct: 1179 cggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcattcaggccacc 1235 Score = 337 bits (170), Expect = 2e-89 Identities = 295/337 (87%) Strand = Plus / Plus Query: 153 atcgagggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggcc 212 ||||||||||| |||||||| ||||||||||||||||||||||| ||| || |||||| Sbjct: 5296 atcgagggcatgaagaagtttgagaccctgtcttacttgccacccctctccatagaggcc 5355 Query: 213 ctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagc 272 ||||||| ||||||| |||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 5356 ctccttacgcaggtcaactacctgatccgctccaagtgggtgccctgcctcgacttcagc 5415 Query: 273 aaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacgatggccggtac 332 ||||| | ||| |||||||||||||||| || ||||||||||| |||||| | ||| Sbjct: 5416 aaggtcagcttcgtcttccgtgagcacaataactcccctgggtactatgatggctgatac 5475 Query: 333 tggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgag 392 |||||| ||||||| ||||||||||||| ||||| |||||||||||||||||||| ||| Sbjct: 5476 cggacaaagtggaagttgcctatgttcgggtgcactgacgccacacaggtgctcaaggag 5535 Query: 393 gtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaac 452 ||||||||||||||||||||||||| ||||| ||||||| |||| ||| ||||||||| Sbjct: 5536 gtggaggaggtcaagaaggagtaccttgacggctatgtccttatcaacggcttcgacaac 5595 Query: 453 atgcgtcaggtgcagtgcgtcagcttcatcgccttca 489 ||| | |||||||| ||||||| |||||| |||||| Sbjct: 5596 atgtgccaggtgcattgcgtcactttcatcaccttca 5632 Score = 289 bits (146), Expect = 4e-75 Identities = 298/348 (85%), Gaps = 2/348 (0%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||| ||||| ||||||||||||||||||||||||| |||||| |||||||| | ||| Sbjct: 3943 caggtttggccgatcgagggcatcaagaagttcgagatcctgtc--acttgccatccctc 4000 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 || |||||||||||| |||||||||||||||||||||| ||||||||| ||||| ||| Sbjct: 4001 tccatggaggccctcctcaagcaggtcgactacctgatcccctccaagtgagtgccctgc 4060 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 ||||||||||| || |||| ||||| |||||||||| ||| || ||||||||||| Sbjct: 4061 ctcgagttcagtaacattggcttcatattccgtgagcgcaataggtcccctgggtactat 4120 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || |||| |||||||||||||| ||||| || || ||||||||| ||| || Sbjct: 4121 gaccgctaatactaaacaatgtggaagctacctatctttgggtgcaccgacaccaagaag 4180 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||| ||||||||||||||||||||||||||||||||||| |||||| | |||||| Sbjct: 4181 gtgctcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgtctgcatcatc 4240 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 488 || ||||||||| |||| |||||| ||||||||||||||||| ||||| Sbjct: 4241 ggcttcgacaacctgcgccaggtgtagtgcgtcagcttcatcaccttc 4288 Score = 121 bits (61), Expect = 2e-24 Identities = 128/147 (87%), Gaps = 5/147 (3%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || ||||| || ||||||| || ||| ||||||||||||| Sbjct: 628 ggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtc 687 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 ||| ||||| || ||||||||||||||||||| |||| ||||||||| |||||||||| Sbjct: 688 cacagccggtctccccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaa 744 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 || ||||||||||||||||||||||| Sbjct: 745 tggcggaaggatcaggtgcatgcaggt 771
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 488 bits (246), Expect = e-135 Identities = 331/357 (92%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 255 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 314 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 315 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 374 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 319 |||||||||||||||||||| ||| ||||||||||||||||| || |||| |||||||| Sbjct: 375 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcctcc-gggtacta 433 Query: 320 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 379 ||| || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 434 cgacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgca 493 Query: 380 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcat 439 ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 494 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcat 553 Query: 440 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 ||| ||||||||| |||| |||||||||||||||||||||||||| |||| |||||| Sbjct: 554 cggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcattcaggccacc 610 Score = 121 bits (61), Expect = 2e-24 Identities = 128/147 (87%), Gaps = 5/147 (3%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || ||||| || ||||||| || ||| ||||||||||||| Sbjct: 3 ggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtc 62 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 ||| ||||| || ||||||||||||||||||| |||| ||||||||| |||||||||| Sbjct: 63 cacagccggtctccccgtcagccgccgctccagcggc---agcctcggccgcgtcagcaa 119 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 || ||||||||||||||||||||||| Sbjct: 120 tggcggaaggatcaggtgcatgcaggt 146
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 486 bits (245), Expect = e-134 Identities = 407/458 (88%), Gaps = 5/458 (1%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||| |||||||||||||| ||||| ||||||||||||||| ||| | || Sbjct: 32 ccttccagggcctcaagtccaccgctggcctccccgtcagccgccgcagcaatgccg--- 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 |||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct: 89 gcctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggtgtggccgattgagg 148 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 |||||||||||||||||||||| |||||||||||||||||| |||||||||||| | Sbjct: 149 gcatcaagaagttcgagaccctttcttacttgccaccactctcggaggaggccctcctga 208 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 ||||| |||||| | ||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 209 agcagatcgacttcttgatccgctccaagtgggttccctgcctggagttcagcaaggttg 268 Query: 280 ggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggaca 338 | ||||||||||| |||||| | ||| |||| || |||||||| ||| ||||||||||| Sbjct: 269 gcttcatcttccgcgagcacggcagca-ctcccggatactacgacggcaggtactggaca 327 Query: 339 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 398 |||||||||||||| |||||||| |||||||||||| ||||||| |||| ||||||||| Sbjct: 328 atgtggaagctgcccatgttcggctgcaccgacgcctcacaggtcatcaaggaggtggag 387 Query: 399 gaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgt 458 || ||||||||| ||||||||||||| ||||| || |||||||| |||| |||||| ||| Sbjct: 388 gacgtcaagaagaagtaccctgacgcctatgttcgcatcatcggcttcgtcaacatccgt 447 Query: 459 caggtgcagtgcgtcagcttcatcgccttcaagccacc 496 |||||||||||||||||||||||||||||||||||||| Sbjct: 448 caggtgcagtgcgtcagcttcatcgccttcaagccacc 485
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 486 bits (245), Expect = e-134 Identities = 328/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1126 caggtgtggccaattgagggcatcaagaagtttgagaccctgtcttacttgccacccctc 1185 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1186 tccacggaagccctctcgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 1245 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 1246 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 1305 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1306 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 1365 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1366 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 1425 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 1426 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 1481 Score = 129 bits (65), Expect = 9e-27 Identities = 129/147 (87%), Gaps = 5/147 (3%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || ||||| || ||||||| || ||| |||| |||||||| Sbjct: 698 ggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccagggtctcaagtc 757 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 ||| |||||||| ||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 758 cacagccggcctgcccgtcagccgccgctccaggggc---agcctcggcagcgtcagcaa 814 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 ||| ||||||||||||||||||||||| Sbjct: 815 cggcggaaggatcaggtgcatgcaggt 841
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 486 bits (245), Expect = e-134 Identities = 328/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 421 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 480 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 481 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 540 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||| ||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 541 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 600 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 ||| | || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 601 gatagtcgatactggacaatgtggaagctgcctatgttcggttgcaccgacgccacacag 660 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 661 gtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 720 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 721 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 776 Score = 103 bits (52), Expect = 5e-19 Identities = 93/106 (87%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| | ||| || |||||||| |||||||||| ||| | Sbjct: 33 ccttccaggggctcaagtccacaggcggtctccccgtcagtcgccgctccagaggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 486 bits (245), Expect = e-134 Identities = 328/356 (92%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 201 |||||||||| || ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 406 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccacccctat 465 Query: 202 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 261 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 466 ccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgcc 525 Query: 262 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 321 ||||||||||||||||||| ||| ||||||||||||||||| ||||| |||||||||| Sbjct: 526 tcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactacg 585 Query: 322 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 381 | || || |||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct: 586 acggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcagg 645 Query: 382 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcg 441 |||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 646 tgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatcg 705 Query: 442 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 | ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 706 gcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacca 761 Score = 119 bits (60), Expect = 9e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || |||||| |||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctccccgtcggccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 486 bits (245), Expect = e-134 Identities = 331/360 (91%) Strand = Plus / Plus Query: 137 catgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccacc 196 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 catgcaggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacc 292 Query: 197 actcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgcc 256 ||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 293 cctctccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgcc 352 Query: 257 ttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggta 316 ||||||||||||||||||||||| ||| ||||||||||||||||| || || || || Sbjct: 353 ctgcctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggata 412 Query: 317 ctacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccac 376 |||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 413 ctacgacggccgatactggactatgtggaagctgcctatgttcgggtgcaccgacgccac 472 Query: 377 acaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnat 436 |||||||||| |||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 473 gcaggtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgt 532 Query: 437 catcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 |||||| ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 533 catcggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 592 Score = 119 bits (60), Expect = 9e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 486 bits (245), Expect = e-134 Identities = 328/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacggaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 418 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcag 477 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 478 gtgctcaacgaggttgaggaggtcaagaaggagtaccctgacgcttatgtccgcgtcatc 537 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 593 Score = 127 bits (64), Expect = 4e-26 Identities = 96/106 (90%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 486 bits (245), Expect = e-134 Identities = 328/356 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 237 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 296 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 297 tccacggaggccctcctgaagcaggtcgactacctgatccgctcaaagtgggtgccctgc 356 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 357 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 416 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 417 gacggccgatactggacaatgtggaagctccctatgttcgggtgcaccgacgccacacag 476 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 477 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 536 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || || |||||| |||| |||||||||||||||||||||| |||||||| |||||| Sbjct: 537 ggctttgacaacctgcgccaggtgcagtgcgtcagcttcagcgccttcaggccacc 592 Score = 111 bits (56), Expect = 2e-21 Identities = 88/98 (89%), Gaps = 3/98 (3%) Strand = Plus / Plus Query: 48 gggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctcggc 107 |||||||||||||| ||||| || ||||||||||||||||||| |||| ||||||||| Sbjct: 41 gggctcaagtccacagccggtctccccgtcagccgccgctccagcggc---agcctcggc 97 Query: 108 agcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||||| || ||||||||||||||||||||||| Sbjct: 98 cgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 478 bits (241), Expect = e-132 Identities = 327/356 (91%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 474 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 533 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 534 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 593 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || ||||||||||||||||||||||| ||||| || |||||||||||||||||| Sbjct: 594 gacggtcgatactggacaatgtggaagctgcccatgtttgggtgcaccgacgccacacag 653 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 654 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 713 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 714 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 769 Score = 127 bits (64), Expect = 4e-26 Identities = 96/106 (90%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctccccgtcagccgccgctcca---gcgcca 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatgggggaaggatcaggtgcatgcaggt 135
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 478 bits (241), Expect = e-132 Identities = 327/356 (91%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaaattcgagaccctgtcttacttgccacccctc 297 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacttgatccgctccaagtgggtgccctgc 357 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || || |||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccggatactac 417 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 418 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 477 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 478 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 537 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 593 Score = 127 bits (64), Expect = 4e-26 Identities = 96/106 (90%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 476 bits (240), Expect = e-131 Identities = 402/453 (88%), Gaps = 5/453 (1%) Strand = Plus / Plus Query: 45 caggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctc 104 ||||| |||||||||||||| ||||| ||||||||||||||| | | ||| |||||| Sbjct: 37 cagggcctcaagtccaccgctggcctccccgtcagccgccgc---agctccgccagcctc 93 Query: 105 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatc 164 ||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||| Sbjct: 94 ggcagcgtcagcaacggtggaagaatcagatgcatgcaggtgtggccgattgagggcatc 153 Query: 165 aagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcag 224 ||||||||||||||||| |||||| ||||||||||| |||||||||||| |||||| Sbjct: 154 aagaagttcgagaccctttcttacctgccaccactctcagaggaggccctcctgaagcag 213 Query: 225 gtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttc 284 |||||| | ||||||||||||||||||| || ||||| ||||||||||||||||| ||| Sbjct: 214 atcgacttcttgatccgctccaagtgggttccctgccttgagttcagcaaggttggcttc 273 Query: 285 atcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtg 343 |||||||| |||||| | ||| | || || |||||||| ||| |||||||||||||||| Sbjct: 274 atcttccgcgagcacggcagcaccccc-ggatactacgacggcaggtactggacaatgtg 332 Query: 344 gaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggt 403 ||||||||| |||||||| |||||||||||| ||||||| |||| |||||||||||||| Sbjct: 333 gaagctgcccatgttcgggtgcaccgacgcctcacaggtcatcaaggaggtggaggaggt 392 Query: 404 caagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggt 463 ||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| || Sbjct: 393 caagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagt 452 Query: 464 gcagtgcgtcagcttcatcgccttcaagccacc 496 |||||| |||||||||||||||||||||||||| Sbjct: 453 gcagtgtgtcagcttcatcgccttcaagccacc 485
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 470 bits (237), Expect = e-129 Identities = 326/356 (91%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || |||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 414 caggtgtggccaattgagggcatcaagaagttcgagaccttgtcttacttgccacccctc 473 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 474 tccacggaagccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 533 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 ||||||||||||||||| || || ||||||||||||||||| || || ||||||||| Sbjct: 534 ctcgagttcagcaaggtaggcatcgtcttccgtgagcacaacagctcccccgggtactac 593 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || ||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 594 gacggtcgatactggacaatgtggaagctgcccatgttcgggtgcaccgacgccacacag 653 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 654 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 713 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 714 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 769 Score = 135 bits (68), Expect = 2e-28 Identities = 97/106 (91%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||||||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccaccgccggtctccccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 470 bits (237), Expect = e-129 Identities = 326/356 (91%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 418 gacggacgatactggacaatgtggaagctacctatgttcgggtgcaccgacgccacgcag 477 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 478 gtgctcaacgaggttgaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 537 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 593 Score = 119 bits (60), Expect = 9e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| |||||||||||||| || ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtcgacagccggtctccccgtcagccgccgctcca---gcgcca 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 470 bits (237), Expect = e-129 Identities = 326/356 (91%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 418 gacggacgatactggacaatgtggaagctacctatgttcgggtgcaccgacgccacgcag 477 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 478 gtgctcaacgaggttgaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 537 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 593 Score = 127 bits (64), Expect = 4e-26 Identities = 96/106 (90%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 470 bits (237), Expect = e-129 Identities = 326/356 (91%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtcgactacctgatccgctccaagtgggtgccctgc 357 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 358 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 417 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 418 gacggacgatactggacaatgtggaagctacctatgttcgggtgcaccgacgccacgcag 477 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 478 gtgctcaacgaggttgaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 537 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||||| |||||| Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacc 593 Score = 127 bits (64), Expect = 4e-26 Identities = 96/106 (90%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 470 bits (237), Expect = e-129 Identities = 326/356 (91%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 602 caggtgtggccgattgagggcatcaagaagttcgagactctgtcttacttgccacccctc 661 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 662 tccacggaggccctcctgaagcaggtcgactacttgatccgctccaagtgggtgccctgc 721 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| | ||||||||||||||| || || ||||||||| Sbjct: 722 ctcgagttcagcaaggttggcttcgttttccgtgagcacaacagctcccccgggtactac 781 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 ||||| || |||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 782 gatggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgctacacag 841 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 842 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 901 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| | || ||||||||||||||||||||||| ||||||| |||||| Sbjct: 902 ggcttcgacaacctacgccaggtgcagtgcgtcagcttcattgccttcaggccacc 957 Score = 141 bits (71), Expect = 2e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| | |||||||| || |||||| |||||||||| || ||| |||| |||||||| Sbjct: 3 ggcccccgctgtgatggcttcctcggccacctccgtcgcacccttccagggtctcaagtc 62 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 ||||||||||| ||||||||||||||||||| | |||| ||||| ||||||||||||| Sbjct: 63 gaccgccggcctgcccgtcagccgccgctccagcagcgccggcctcagcagcgtcagcaa 122 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 ||| ||||||||||||||||||||||| Sbjct: 123 cggcggaaggatcaggtgcatgcaggt 149
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 466 bits (235), Expect = e-128 Identities = 309/334 (92%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 405 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 464 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 465 tccacggaggccctcctgaagcaggtcgactacctgatccgctccaagtgggtgccctgc 524 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||||||||||||| || || ||||||||| Sbjct: 525 ctcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactac 584 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 585 gacggccgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacacag 644 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 645 gtgctcagcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatc 704 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtca 474 || || |||||| |||| |||||||||||||||| Sbjct: 705 ggctttgacaacctgcgccaggtgcagtgcgtca 738 Score = 119 bits (60), Expect = 9e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || |||||| |||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctccccgtcggccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 464 bits (234), Expect = e-127 Identities = 405/459 (88%), Gaps = 5/459 (1%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||| |||||||||||||| ||||| ||||||||||| ||| | ||| | Sbjct: 32 ccttccagggcctcaagtccaccgctggcctccccgtcagccgtcgcagctccgga---a 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagg 159 |||||||||||||||||||||||||||| ||| | ||||||||||||||||| || |||| Sbjct: 89 gcctcggcagcgtcagcaacggtggaagaatccgatgcatgcaggtgtggccgattgagg 148 Query: 160 gcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctta 219 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | Sbjct: 149 gcatcaagaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctga 208 Query: 220 agcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttg 279 ||||| |||| | | ||||||||||||||||||| || ||||| |||||||||||||||| Sbjct: 209 agcagatcgaattcttgatccgctccaagtgggttccctgcctggagttcagcaaggttg 268 Query: 280 ggttcatcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggaca 338 | ||||||||||| |||||| | ||| |||| || |||||||| ||| ||||||||||| Sbjct: 269 gcttcatcttccgcgagcacggcagca-ctcccggatactacgacggcaggtactggaca 327 Query: 339 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggag 398 |||||||||||||| |||||||| |||||||||||| |||||||| |||| ||||||||| Sbjct: 328 atgtggaagctgcccatgttcggctgcaccgacgcctcacaggtgatcaaggaggtggag 387 Query: 399 gaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgt 458 |||||||||||||||||||||||||| |||||||| |||||||| || |||||||| ||| Sbjct: 388 gaggtcaagaaggagtaccctgacgcctatgtccgcatcatcggcttagacaacatccgt 447 Query: 459 caggtgcagtgcgtcagcttcatcgccttcaagccacca 497 || |||||||| ||||||||||||||||||||||||||| Sbjct: 448 caagtgcagtgtgtcagcttcatcgccttcaagccacca 486
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 464 bits (234), Expect = e-127 Identities = 326/357 (91%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 357 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 358 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 417 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 418 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcaa 477 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 478 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgatgcctatgtccgtgtcatc 537 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacca 594 Score = 119 bits (60), Expect = 9e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 464 bits (234), Expect = e-127 Identities = 326/357 (91%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 238 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 297 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 298 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 357 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 358 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 417 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 418 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcaa 477 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||| Sbjct: 478 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgatgcctatgtccgtgtcatc 537 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 538 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacca 594 Score = 119 bits (60), Expect = 9e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggccgcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 460 bits (232), Expect = e-126 Identities = 400/453 (88%), Gaps = 5/453 (1%) Strand = Plus / Plus Query: 45 caggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctc 104 ||||| |||||||||||||| || || ||||||||||||||| | || | | |||||| Sbjct: 37 cagggcctcaagtccaccgcaggactccccgtcagccgccgc---agcgcctccagcctc 93 Query: 105 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatc 164 |||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 94 ggcaacgtcagcaacggtggaaggatcaggtgcatgcaggtgtggccgattgagggcatc 153 Query: 165 aagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctccttaagcag 224 |||||||||||||||||||||||| ||||||||||| |||||||||||| |||||| Sbjct: 154 aagaagttcgagaccctgtcttacctgccaccactctcagaggaggccctcctgaagcag 213 Query: 225 gtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttc 284 |||||| | ||||||||||||||||||| || ||||| |||||||||||||| || ||| Sbjct: 214 atcgacttcttgatccgctccaagtgggttccctgccttgagttcagcaaggtgggcttc 273 Query: 285 atcttccgtgagcacaac-gcatctcctgggtactacgatggccggtactggacaatgtg 343 |||||||| |||||| | ||| | || || |||||||| ||| |||||||||||||||| Sbjct: 274 atcttccgcgagcacggcagca-cccccggatactacgacggcaggtactggacaatgtg 332 Query: 344 gaagctgcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggt 403 ||||||||| |||||||| |||||||| ||| | ||||| |||| ||||| |||||||| Sbjct: 333 gaagctgcccatgttcggctgcaccgatgcctcgcaggtcatcaaggaggtagaggaggt 392 Query: 404 caagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggt 463 ||||||||||||||||||||| |||||||| |||||||| ||||||||||| ||||| || Sbjct: 393 caagaaggagtaccctgacgcctatgtccgcatcatcggcttcgacaacatccgtcaagt 452 Query: 464 gcagtgcgtcagcttcatcgccttcaagccacc 496 ||||||||||||||||||||||||||||||||| Sbjct: 453 gcagtgcgtcagcttcatcgccttcaagccacc 485
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 456 bits (230), Expect = e-125 Identities = 316/345 (91%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 201 |||||||||| || ||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccctat 480 Query: 202 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 261 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 481 ccacggaggccctcctgaaacaggtcgactacctgatccgctcaaagtgggtgccctgcc 540 Query: 262 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 321 ||||||||||||||||||| ||| ||||||||||||||||| || || |||||||||| Sbjct: 541 tcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactacg 600 Query: 322 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 381 | ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 601 acggccgatactggacaatgtggaagctgcctatgttcgggtgcactgacgccacacagg 660 Query: 382 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcg 441 |||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 661 tgctgaacgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatcg 720 Query: 442 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgcct 486 | ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 721 gcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcct 765 Score = 111 bits (56), Expect = 2e-21 Identities = 94/106 (88%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || |||||| |||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctccccgtcggccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||| ||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcagcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 456 bits (230), Expect = e-125 Identities = 325/357 (91%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 246 caggtgtggccgattgagggtatcaagaagttcgagaccctgtcttacttgccacccctc 305 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 ||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 306 tccacagaggccctcctaaagcaggtagactacctgatccgctccaagtgggtgccctgc 365 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||| ||||||||||| ||| ||||||||||||||||| ||||| ||||||||| Sbjct: 366 ctcgagtttagcaaggttggcttcgtcttccgtgagcacaacagctctcccgggtactac 425 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || || |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 426 gacggtcgatactggacaatgtggaagctgcctatgttcgggtgcaccgacgccacgcaa 485 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||||||||||||||||||||||||||||||||||||||||| || |||||||| ||| | Sbjct: 486 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgatgcctatgtccgtgtcaac 545 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 || ||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 546 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgccttcaggccacca 602 Score = 93.7 bits (47), Expect = 5e-16 Identities = 125/147 (85%), Gaps = 8/147 (5%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || ||||| || ||||||| || ||| ||||||||||||| Sbjct: 3 ggcccccgccgtgatggcttcgtcggctaccaccgtcgcacccttccaggggctcaagtc 62 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 ||| ||||| || ||||||||||||||||||| || ||||||||| |||||| ||| Sbjct: 63 cacagccggtctgcccgtcagccgccgctcca-----gcgagcctcggccgcgtca-caa 116 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 || ||||||||||||||||||||||| Sbjct: 117 tggcggaaggatcaggtgcatgcaggt 143
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 454 bits (229), Expect = e-124 Identities = 324/356 (91%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 224 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttacttgccacccctc 283 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||| |||||| | ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 284 tccacggaagccctcttgaagcaggtcgactacctgatccgctccaagtgggtaccctgc 343 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||||||| ||||||||| || || || |||||| Sbjct: 344 ctcgagttcagcaaggttggcttcgtcttccgcgagcacaacagctcccccggttactac 403 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || |||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 404 gacggccggtactggacaatgtggaagctgcctatgttcggctgcacggacgccactcag 463 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 464 gtgctcaatgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcgtcatc 523 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 || ||||||||| |||| ||||||||||||||||||||||||||||| | |||||| Sbjct: 524 ggcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcctttaggccacc 579 Score = 119 bits (60), Expect = 9e-24 Identities = 95/106 (89%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || ||||||||||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctgcccgtcagccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcggcaacgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 452 bits (228), Expect = e-124 Identities = 323/355 (90%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 201 |||||||||| || ||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 421 aggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccacccctat 480 Query: 202 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 261 ||||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||| Sbjct: 481 ccacggaggccctcctgaaacaggtcgactacctgatccgctcaaagtgggtgccctgcc 540 Query: 262 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 321 ||||||||||||||||||| ||| ||||||||||||||||| || || |||||||||| Sbjct: 541 tcgagttcagcaaggttggcttcgtcttccgtgagcacaacagctcccccgggtactacg 600 Query: 322 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 381 | ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 601 acggccgatactggacaatgtggaagctgcctatgttcgggtgcactgacgccacacagg 660 Query: 382 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcg 441 |||| | |||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 661 tgctgatcgaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgtgtcatcg 720 Query: 442 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 | ||||||||| |||| ||||||||||||||||||||||||||||| | |||||| Sbjct: 721 gcttcgacaacctgcgccaggtgcagtgcgtcagcttcatcgcctttaggccacc 775 Score = 111 bits (56), Expect = 2e-21 Identities = 94/106 (88%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||||||||||||||| ||||| || |||||| |||||||||||| |||| | Sbjct: 33 ccttccaggggctcaagtccacagccggtctccccgtcggccgccgctccagcggc---a 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||| ||||||||||||| || ||||||||||||||||||||||| Sbjct: 90 gcctcagcagcgtcagcaatggcggaaggatcaggtgcatgcaggt 135
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 400 bits (202), Expect = e-108 Identities = 320/357 (89%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 201 |||||||||| || |||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 213 aggtgtggccgattgagggcatcaagaagttcgagaccctttcttacttgccaccactct 272 Query: 202 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 261 |||||||||||| |||||| |||||| | ||||||||||||||||||| || |||| Sbjct: 273 cagaggaggccctcctaaagcagatcgacttcttgatccgctccaagtgggttccctgcc 332 Query: 262 tcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtactac 320 | ||||||||||||||||| ||||||||||| |||||| | ||| | || || |||||| Sbjct: 333 ttgagttcagcaaggttggcttcatcttccgcgagcacggcagcaccccc-ggatactac 391 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || ||| |||||||||||||||||||| |||| |||||||| |||||||||||| ||||| Sbjct: 392 gacggcaggtactggacaatgtggaagttgcccatgttcgggtgcaccgacgcctcacag 451 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 452 gtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcatcatc 511 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 512 ggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgccttcaagccacca 568 Score = 125 bits (63), Expect = 1e-25 Identities = 121/137 (88%), Gaps = 5/137 (3%) Strand = Plus / Plus Query: 11 gtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccaccgccggc 68 |||||||| || |||||| |||||||||| || ||| |||| |||||||||||||| ||| Sbjct: 1 gtgatggcttcttcggccacctccgtcgcgcccttccagggcctcaagtccaccgctggc 60 Query: 69 cttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaagg 128 |||||||||||||||||| | || | | |||||||||||||||||||||||||||||| Sbjct: 61 cttcccgtcagccgccgc---agcgcctccagcctcggcagcgtcagcaacggtggaagg 117 Query: 129 atcaggtgcatgcaggt 145 ||||| ||||||||||| Sbjct: 118 atcagatgcatgcaggt 134
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 392 bits (198), Expect = e-106 Identities = 319/357 (89%), Gaps = 2/357 (0%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 246 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacctgccaccactg 305 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||||||||| |||||| |||||| | ||||||||||||||||||| || ||| Sbjct: 306 tcagaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggttccctgc 365 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 319 |||||||||||||||||||| ||||||||||| |||||| | ||| |||| || ||||| Sbjct: 366 ctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcccggatacta 424 Query: 320 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 379 ||| ||| ||||||||||||||||||||||||| |||||||| ||||| |||||| |||| Sbjct: 425 cgacggcaggtactggacaatgtggaagctgcccatgttcggctgcactgacgcctcaca 484 Query: 380 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcat 439 |||| |||| ||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 485 ggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgttcgcatcat 544 Query: 440 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 ||| ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 545 cggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgcattcaagccacc 601 Score = 111 bits (56), Expect = 2e-21 Identities = 94/106 (88%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||| |||||||||||||| ||||| ||||||||||||||| ||| | || Sbjct: 32 ccttccagggcctcaagtccaccgctggcctccccgtcagccgccgcagcaatgccg--- 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89 gcctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggt 134
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 389 bits (196), Expect = e-105 Identities = 419/491 (85%), Gaps = 2/491 (0%) Strand = Plus / Plus Query: 5 cccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccacc 62 ||||||||||||||||| |||||| ||||||| ||||| ||| |||||||||| |||||| Sbjct: 75 cccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaatccacc 134 Query: 63 gccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggt 122 ||||| || ||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 135 gccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagcaacggt 194 Query: 123 ggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctg 182 ||||||||||| || |||||||||||||| || || |||||||||||||| ||||||||| Sbjct: 195 ggaaggatcagctgtatgcaggtgtggccgattgaaggcatcaagaagtttgagaccctg 254 Query: 183 tcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgc 242 || ||| ||||||| |||| |||| |||| | |||||| |||| |||||| |||| Sbjct: 255 tcgtacctgccaccgctcacggtcgaggacctcttgaagcagatcgagtacctgctccgg 314 Query: 243 tccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaac 302 ||||| |||||||||||||||||||| || ||||| |||||| ||| ||||||| || || Sbjct: 315 tccaaatgggtgccttgcctcgagtttagtaaggtcgggttcgtctaccgtgagaaccac 374 Query: 303 gcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgga 362 |||||||||||||| |||||| |||||||||| |||||||||||||||||||||||| Sbjct: 375 aggtctcctgggtactatgatggcaggtactggaccatgtggaagctgcctatgttcgga 434 Query: 363 tgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgac 422 ||||| || ||||| ||||||||||| ||| | ||||||| |||||||| || || || Sbjct: 435 tgcactgatgccacccaggtgctcaaggagctcgaggaggccaagaaggcatatccagat 494 Query: 423 gcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatc 482 || | ||| || |||||||| ||||||||| | | |||||||||| | ||||||||| Sbjct: 495 gcatttgttcgcatcatcggcttcgacaacgtcaggcaggtgcagttgattagcttcatc 554 Query: 483 gccttcaagcc 493 |||| |||||| Sbjct: 555 gcctacaagcc 565
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 387 bits (195), Expect = e-104 Identities = 319/358 (89%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| | |||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 226 caggtgtggccgactgagggcatcaagaagttcgagaccctttcttacctgccaccactc 285 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 | |||||||||||| || ||| |||||| | ||||||||||||||||||| || ||| Sbjct: 286 tccgaggaggccctcctgaaacagatcgacttcttgatccgctccaagtgggttccctgc 345 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 319 |||||||||||||||||||| ||||||||||| |||||| | ||| | || || ||||| Sbjct: 346 ctcgagttcagcaaggttggcttcatcttccgcgagcacggcagcaccccc-ggatacta 404 Query: 320 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 379 ||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||| | || Sbjct: 405 cgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccgacgcctccca 464 Query: 380 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcat 439 ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 465 ggtcatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcatcat 524 Query: 440 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 525 cggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgccttcaagccacca 582 Score = 87.7 bits (44), Expect = 3e-14 Identities = 101/118 (85%), Gaps = 4/118 (3%) Strand = Plus / Plus Query: 29 cctccgtcgctcctttc-aggggctcaagtccaccgccggccttcccgtcagccgccgct 87 |||||||||| |||||| |||| ||||||||||| || || || ||||||||||||||| Sbjct: 20 cctccgtcgcgcctttccagggcctcaagtccacggcagggctccccgtcagccgccgc- 78 Query: 88 ccaacggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 | || | | ||||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 79 --agcgcctccagcctgggcagcgtcagcaacggtggaagaatcagatgcatgcaggt 134
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 387 bits (195), Expect = e-104 Identities = 319/358 (89%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 caggtgtggccaattgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 279 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||||||||| |||||| |||||| | ||||||||||||||||||| || ||| Sbjct: 280 tctgaggaggccctcctgaagcagatcgacttcttgatccgctccaagtgggttccctgc 339 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 319 || ||||||||||||||||| ||||||||||| | |||| | ||| | || || ||||| Sbjct: 340 cttgagttcagcaaggttggcttcatcttccgcgtgcacggcagcaccccc-ggatacta 398 Query: 320 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 379 ||| ||| |||||||||||||||||||| |||| |||||||| ||||| |||||| |||| Sbjct: 399 cgacggcaggtactggacaatgtggaagttgcccatgttcggctgcacagacgcctcaca 458 Query: 380 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcat 439 ||| |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 459 ggtcatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgtccgcatcat 518 Query: 440 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 ||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 519 cggcttcgacaacatccgtcaagtgcagtgcgtcagcttcatcgccttcaagccacca 576 Score = 103 bits (52), Expect = 5e-19 Identities = 93/106 (87%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||| |||||||||||||| ||||| |||||||||||||| ||| | || Sbjct: 32 ccttccagggcctcaagtccaccgctggcctcgccgtcagccgccgcagcaatgccg--- 88 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89 gcctcggcagcgtcagcaacggcggaaggatcaggtgcatgcaggt 134
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 387 bits (195), Expect = e-104 Identities = 319/358 (89%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 223 caggtgtggccgattgagggcatcaagaagttcgagaccctgtcttatctgccaccactg 282 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||||||| | |||||| |||||| ||||||||||||||||||||| || ||| Sbjct: 283 tcagaggaggccctcttgaagcagatcgacttcctgatccgctccaagtgggttccctgc 342 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 319 || |||||||||||||| || |||||||||||||||||| | ||| |||| || ||||| Sbjct: 343 ctggagttcagcaaggtgggcttcatcttccgtgagcacggcagca-ctcccggatacta 401 Query: 320 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 379 ||| ||| ||||||||||||||||||||||||| |||||||| |||||||||||| | || Sbjct: 402 cgacggcaggtactggacaatgtggaagctgcccatgttcggctgcaccgacgcctccca 461 Query: 380 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcat 439 ||| |||| |||||||||||||| |||||||||||||||||||| |||||||| ||||| Sbjct: 462 ggtcatcaaggaggtggaggaggtgaagaaggagtaccctgacgcctatgtccgcatcat 521 Query: 440 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 cggtttcgacaacatccgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 579 Score = 103 bits (52), Expect = 5e-19 Identities = 93/106 (87%), Gaps = 3/106 (2%) Strand = Plus / Plus Query: 40 cctttcaggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgcta 99 |||| ||||| ||||||||||| || |||||||||||| |||||||| ||||| || Sbjct: 33 ccttccagggcctcaagtccactgctggccttcccgtcggccgccgcagcaacgccg--- 89 Query: 100 gcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 90 gcctcggcaacgtcagcaacggtggaaggatcagatgcatgcaggt 135
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 381 bits (192), Expect = e-102 Identities = 421/495 (85%), Gaps = 2/495 (0%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||||||||||||||||| |||||| ||||||| ||||| ||| | ||||||||||| Sbjct: 54 ggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtc 113 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 ||||||||| || ||||||||||||||||||| | | | || |||||| ||||||||| Sbjct: 114 caccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaa 173 Query: 119 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 178 || |||||||||| |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 174 tggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgagac 233 Query: 179 cctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgat 238 ||| || ||| |||||||||||| | ||||| || | |||||| |||| |||||| | Sbjct: 234 cctatcgtacctgccaccactcaccgtggaggatcttttgaagcagatcgagtacctgct 293 Query: 239 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 298 || |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| | Sbjct: 294 tcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctaccgtgagaa 353 Query: 299 caacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 | || ||||| ||||||||||||||| |||| ||||| |||||||||||||| ||||| Sbjct: 354 ccacaggtctcccgggtactacgatggcaggtattggaccatgtggaagctgcccatgtt 413 Query: 359 cggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccc 418 ||| |||||||| ||||| ||||||||||| ||| | ||||||| |||||||| ||||| Sbjct: 414 cggctgcaccgatgccacccaggtgctcaaggagctcgaggaggccaagaaggcctaccc 473 Query: 419 tgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagctt 478 || || | |||||| |||||||| ||||||||| | | |||||||||| | ||||| Sbjct: 474 cgatgcctttgtccgtatcatcggcttcgacaacgtcaggcaggtgcagttgattagctt 533 Query: 479 catcgccttcaagcc 493 |||||||| |||||| Sbjct: 534 catcgcctacaagcc 548
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 381 bits (192), Expect = e-102 Identities = 421/495 (85%), Gaps = 2/495 (0%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || |||||| || |||||||||| ||| ||||||||||||| Sbjct: 213 ggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtc 272 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| Sbjct: 273 caccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaa 332 Query: 119 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 178 || || |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 333 tggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagac 392 Query: 179 cctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgat 238 ||| || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| | Sbjct: 393 cctctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgct 452 Query: 239 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 298 ||| |||||||||||||| |||||||||||||||||||| || ||| ||| ||||||| | Sbjct: 453 ccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaa 512 Query: 299 caacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 | || ||| || || |||||||||||| |||||||||| |||||||||||||| ||||| Sbjct: 513 ccacagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccatgtt 572 Query: 359 cggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccc 418 ||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| |||||| Sbjct: 573 cgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgtaccc 632 Query: 419 tgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagctt 478 ||| || | ||||| |||||||| ||||||||| | | ||||||||| | ||||||| Sbjct: 633 tgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcagctt 692 Query: 479 catcgccttcaagcc 493 |||||||| |||||| Sbjct: 693 catcgcctacaagcc 707
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 381 bits (192), Expect = e-102 Identities = 421/495 (85%), Gaps = 2/495 (0%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || |||||| || |||||||||| ||| ||||||||||||| Sbjct: 59 ggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtc 118 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| Sbjct: 119 caccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaa 178 Query: 119 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 178 || || |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 179 tggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagac 238 Query: 179 cctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgat 238 ||| || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| | Sbjct: 239 cctctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgct 298 Query: 239 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 298 ||| |||||||||||||| |||||||||||||||||||| || ||| ||| ||||||| | Sbjct: 299 ccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaa 358 Query: 299 caacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 | || ||| || || |||||||||||| |||||||||| |||||||||||||| ||||| Sbjct: 359 ccacagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccatgtt 418 Query: 359 cggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccc 418 ||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| |||||| Sbjct: 419 cgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgtaccc 478 Query: 419 tgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagctt 478 ||| || | ||||| |||||||| ||||||||| | | ||||||||| | ||||||| Sbjct: 479 tgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcagctt 538 Query: 479 catcgccttcaagcc 493 |||||||| |||||| Sbjct: 539 catcgcctacaagcc 553
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 381 bits (192), Expect = e-102 Identities = 421/495 (85%), Gaps = 2/495 (0%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||||||||||||||||| |||||| ||||||| ||||| ||| | ||||||||||| Sbjct: 71 ggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtc 130 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 ||||||||| || ||||||||||||||||||| | | | || |||||| ||||||||| Sbjct: 131 caccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaa 190 Query: 119 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 178 || |||||||||| |||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 191 tggcggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgagac 250 Query: 179 cctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgat 238 ||| || ||| |||||||||||| | ||||| || | |||||| |||| |||||| | Sbjct: 251 cctatcgtacctgccaccactcaccgtggaggatcttttgaagcagatcgagtacctgct 310 Query: 239 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 298 || |||||||||||||||||||||||||||||||||||||| ||| ||| ||||||| | Sbjct: 311 tcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctaccgtgagaa 370 Query: 299 caacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 | || ||||| ||||||||||||||| |||| ||||| |||||||||||||| ||||| Sbjct: 371 ccacaggtctcccgggtactacgatggcaggtattggaccatgtggaagctgcccatgtt 430 Query: 359 cggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccc 418 ||| |||||||| ||||| ||||||||||| ||| | ||||||| |||||||| ||||| Sbjct: 431 cggctgcaccgatgccacccaggtgctcaaggagctcgaggaggccaagaaggcctaccc 490 Query: 419 tgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagctt 478 || || | |||||| |||||||| ||||||||| | | |||||||||| | ||||| Sbjct: 491 cgatgcctttgtccgtatcatcggcttcgacaacgtcaggcaggtgcagttgattagctt 550 Query: 479 catcgccttcaagcc 493 |||||||| |||||| Sbjct: 551 catcgcctacaagcc 565
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 381 bits (192), Expect = e-102 Identities = 421/495 (85%), Gaps = 2/495 (0%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || |||||| || |||||||||| ||| ||||||||||||| Sbjct: 62 ggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtc 121 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| Sbjct: 122 caccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaa 181 Query: 119 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 178 || || |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 182 tggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagac 241 Query: 179 cctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgat 238 ||| || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| | Sbjct: 242 cctctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgct 301 Query: 239 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 298 ||| |||||||||||||| |||||||||||||||||||| || ||| ||| ||||||| | Sbjct: 302 ccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaa 361 Query: 299 caacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 | || ||| || || |||||||||||| |||||||||| |||||||||||||| ||||| Sbjct: 362 ccacagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccatgtt 421 Query: 359 cggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccc 418 ||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| |||||| Sbjct: 422 cgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgtaccc 481 Query: 419 tgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagctt 478 ||| || | ||||| |||||||| ||||||||| | | ||||||||| | ||||||| Sbjct: 482 tgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcagctt 541 Query: 479 catcgccttcaagcc 493 |||||||| |||||| Sbjct: 542 catcgcctacaagcc 556
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 381 bits (192), Expect = e-102 Identities = 421/495 (85%), Gaps = 2/495 (0%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || |||||| || |||||||||| ||| ||||||||||||| Sbjct: 57 ggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtc 116 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| Sbjct: 117 caccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaa 176 Query: 119 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 178 || || |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 177 tggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagac 236 Query: 179 cctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgat 238 ||| || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| | Sbjct: 237 cctctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgct 296 Query: 239 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 298 ||| |||||||||||||| |||||||||||||||||||| || ||| ||| ||||||| | Sbjct: 297 ccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaa 356 Query: 299 caacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 | || ||| || || |||||||||||| |||||||||| |||||||||||||| ||||| Sbjct: 357 ccacagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccatgtt 416 Query: 359 cggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccc 418 ||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| |||||| Sbjct: 417 cgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgtaccc 476 Query: 419 tgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagctt 478 ||| || | ||||| |||||||| ||||||||| | | ||||||||| | ||||||| Sbjct: 477 tgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcagctt 536 Query: 479 catcgccttcaagcc 493 |||||||| |||||| Sbjct: 537 catcgcctacaagcc 551
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 379 bits (191), Expect = e-102 Identities = 318/358 (88%), Gaps = 2/358 (0%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 219 caggtatggccgattgagggcatcaagaagttcgagaccctgtcttacctgccaccactc 278 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 |||||||||||| |||||| | |||| | ||||||||||||||||||| || ||| Sbjct: 279 tcagaggaggccctcctgaagcagattgacttcttgatccgctccaagtgggttccctgc 338 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtacta 319 |||||||||||||||||||| ||||||||||| |||||| | ||| |||| || ||||| Sbjct: 339 ctcgagttcagcaaggttggcttcatcttccgcgagcacggcagca-ctcccggatacta 397 Query: 320 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 379 ||||||| ||||||||||||||||||||||||| |||||||| ||||| || ||| |||| Sbjct: 398 cgatggcaggtactggacaatgtggaagctgcccatgttcggctgcactgatgcctcaca 457 Query: 380 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcat 439 |||| |||| ||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 458 ggtgatcaaggaggtggaggaggtcaagaaggagtaccctgacgcctatgttcgcatcat 517 Query: 440 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 ||| ||||||||||| || || ||||||||||||||||||||||| |||||||||||| Sbjct: 518 cggcttcgacaacatccgccaagtgcagtgcgtcagcttcatcgcattcaagccacca 575 Score = 77.8 bits (39), Expect = 3e-11 Identities = 86/101 (85%), Gaps = 3/101 (2%) Strand = Plus / Plus Query: 45 caggggctcaagtccaccgccggccttcccgtcagccgccgctccaacggcgctagcctc 104 ||||| ||||||||||| || ||||||||||||||||| ||| ||| | | |||| Sbjct: 37 cagggcctcaagtccactgctggccttcccgtcagccgtcgcagcaatgcgg---gcctt 93 Query: 105 ggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 94 ggcagcgtcagcaacggtggaagaatcagatgcatgcaggt 134
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 377 bits (190), Expect = e-101 Identities = 419/493 (84%), Gaps = 2/493 (0%) Strand = Plus / Plus Query: 3 cccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtcca 60 ||||| |||||||||| || |||||| || |||||||||| ||| ||||||||||||||| Sbjct: 62 ccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtcca 121 Query: 61 ccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacg 120 |||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| | Sbjct: 122 ccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaatg 181 Query: 121 gtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccc 180 | || |||||||||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 182 gcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagaccc 241 Query: 181 tgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatcc 240 | || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| ||| Sbjct: 242 tctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgctcc 301 Query: 241 gctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcaca 300 | |||||||||||||| |||||||||||||||||||| || ||| ||| ||||||| || Sbjct: 302 gttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaacc 361 Query: 301 acgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcg 360 || ||| || || |||||||||||| |||||||||| |||||||||||||| ||||||| Sbjct: 362 acagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccatgttcg 421 Query: 361 gatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctg 420 | ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| |||||||| Sbjct: 422 ggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgtaccctg 481 Query: 421 acgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttca 480 | || | ||||| |||||||| ||||||||| | | ||||||||| | ||||||||| Sbjct: 482 atgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcagcttca 541 Query: 481 tcgccttcaagcc 493 |||||| |||||| Sbjct: 542 tcgcctacaagcc 554
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 377 bits (190), Expect = e-101 Identities = 421/495 (85%), Gaps = 5/495 (1%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || |||||| || |||||||||| ||| ||||||||||||| Sbjct: 40 ggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtc 99 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||| | |||||| ||||||||||||| | ||| |||||| ||||||||| Sbjct: 100 caccgccggcatgcccgtcgcccgccgctccaactcc---agcttcggcaacgtcagcaa 156 Query: 119 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 178 || || |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 157 tggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagac 216 Query: 179 cctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgat 238 ||| || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| | Sbjct: 217 cctctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgct 276 Query: 239 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 298 ||| |||||||||||||| |||||||||||||||||||| || || ||| ||||||| | Sbjct: 277 ccgttccaagtgggtgccctgcctcgagttcagcaaggtcggatttgtctaccgtgagaa 336 Query: 299 caacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 | || || ||||| |||||||| ||| |||||||||| |||||||||||||| ||||| Sbjct: 337 ccacaagtcccctggatactacgacggcaggtactggaccatgtggaagctgcccatgtt 396 Query: 359 cggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccc 418 ||| |||||||||||||| ||||||||||| ||| | ||||||| |||||||| |||||| Sbjct: 397 cgggtgcaccgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgtaccc 456 Query: 419 tgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagctt 478 ||| || | ||||| |||||||| ||||||||| | | ||||||||| | ||||||| Sbjct: 457 tgatgcattcgtccgtatcatcggcttcgacaacgttaggcaggtgcagctcatcagctt 516 Query: 479 catcgccttcaagcc 493 |||||||| |||||| Sbjct: 517 catcgcctacaagcc 531
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 373 bits (188), Expect = e-100 Identities = 420/495 (84%), Gaps = 2/495 (0%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || |||||| || |||||||||| ||| ||||||||||||| Sbjct: 85 ggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtc 144 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| Sbjct: 145 caccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaa 204 Query: 119 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 178 || || |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 205 tggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagac 264 Query: 179 cctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgat 238 ||| |||||| ||||||| |||| | ||||| |||||| |||||| |||| ||||| | Sbjct: 265 cctctcttacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctcct 324 Query: 239 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 298 ||| |||||||||||||| |||||||||||||||||||| || || ||| ||||||| | Sbjct: 325 ccgttccaagtgggtgccctgcctcgagttcagcaaggtcggatttgtctaccgtgagaa 384 Query: 299 caacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 | || ||| || || |||||||||||| |||||||||| |||||||||||||| ||||| Sbjct: 385 ccacagatcccccggatactacgatggcaggtactggaccatgtggaagctgcccatgtt 444 Query: 359 cggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccc 418 ||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| |||||| Sbjct: 445 cgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgtaccc 504 Query: 419 tgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagctt 478 ||| || | ||||| |||||||| ||||||||| | | ||||||||| | ||||||| Sbjct: 505 tgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcagctt 564 Query: 479 catcgccttcaagcc 493 |||||||| |||||| Sbjct: 565 catcgcctacaagcc 579
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 357 bits (180), Expect = 2e-95 Identities = 418/495 (84%), Gaps = 2/495 (0%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || |||||| || |||||||||| ||| ||||||||||||| Sbjct: 48 ggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtc 107 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| Sbjct: 108 caccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaa 167 Query: 119 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 178 || || |||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 168 tggcggcaggatcaggtgcatgcaggtgtggccgattgagggcatcaagaagttcgagac 227 Query: 179 cctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgat 238 ||| || ||| ||||||| |||| | ||||| |||||| |||||| |||| |||||| | Sbjct: 228 cctctcctacctgccaccgctcaccgtggaggacctcctgaagcagatcgagtacctgct 287 Query: 239 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 298 ||| |||||||||||||| |||||||||||||||||||| || ||| ||| ||||||| | Sbjct: 288 ccgttccaagtgggtgccctgcctcgagttcagcaaggtcggattcgtctaccgtgagaa 347 Query: 299 caacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 | || ||| || || || ||||||||| |||||||||| |||||||||||||| ||||| Sbjct: 348 ccacagatcccccggatattacgatggcaggtactggaccatgtggaagctgcccatgtt 407 Query: 359 cggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccc 418 ||| ||||| |||||||| ||||||||||| ||| | ||||||| |||||||| | |||| Sbjct: 408 cgggtgcactgacgccacccaggtgctcaaggagctcgaggaggccaagaaggcgaaccc 467 Query: 419 tgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagctt 478 ||| || | ||||| |||||||| ||||||||| | | ||||||||| | |||| || Sbjct: 468 tgatgcattcgtccgtatcatcggcttcgacaacgtcaggcaggtgcagctcatcagttt 527 Query: 479 catcgccttcaagcc 493 |||||||| |||||| Sbjct: 528 catcgcctacaagcc 542
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 357 bits (180), Expect = 2e-95 Identities = 418/495 (84%), Gaps = 2/495 (0%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||||||||||||||||| |||||| ||||||| ||||| ||| | ||||||||||| Sbjct: 69 ggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtc 128 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 ||||||||| || ||||||||||||||||||| | | | || |||||| ||||||||| Sbjct: 129 caccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaa 188 Query: 119 cggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagac 178 || |||||||||| || ||||||||||||||| || ||||||||||||||||||||||| Sbjct: 189 tggcggaaggatcaagttcatgcaggtgtggccaattgagggcatcaagaagttcgagac 248 Query: 179 cctgtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgat 238 ||| || ||| |||||||||||| | ||||| || | |||||| |||| |||||| | Sbjct: 249 cctatcgtacctgccaccactcaccgtggaggatcttttgaagcagatcgagtacctgct 308 Query: 239 ccgctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagca 298 || |||||||||||||||||||||||||||||||||||||| ||| ||| ||| ||| | Sbjct: 309 tcgatccaagtgggtgccttgcctcgagttcagcaaggttggattcgtctaccgcgagaa 368 Query: 299 caacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 | || ||||| ||||||||||||||| |||| ||||| |||||||||||||| ||||| Sbjct: 369 ccacaggtctcccgggtactacgatggcaggtattggaccatgtggaagctgcccatgtt 428 Query: 359 cggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccc 418 ||| |||||||| ||||| ||||||||||| ||| | ||||||| |||||||| ||||| Sbjct: 429 cggctgcaccgatgccacccaggtgctcaaggagctcgaggaggccaagaaggcctaccc 488 Query: 419 tgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagctt 478 || || | | |||| |||||||| ||||||||| | | |||||||||| | ||||| Sbjct: 489 cgatgcctttatccgtatcatcggcttcgacaacgtcaggcaggtgcagttgattagctt 548 Query: 479 catcgccttcaagcc 493 |||||||| |||||| Sbjct: 549 catcgcctacaagcc 563
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 341 bits (172), Expect = 1e-90 Identities = 383/451 (84%), Gaps = 2/451 (0%) Strand = Plus / Plus Query: 4 ccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccac 61 |||||||||||||||||| |||||| ||||||| ||||| ||| | |||||||||||||| Sbjct: 58 ccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtccac 117 Query: 62 cgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacgg 121 |||||| || ||||||||||||||||||| | | | || |||||| ||||||||| || Sbjct: 118 cgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaatgg 177 Query: 122 tggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 181 |||||||||| |||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 178 cggaaggatcaagtgcatgcaggtgtggccaattgagggcatcaagaagttcgagaccct 237 Query: 182 gtcttacttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccg 241 || ||| |||||||||||| | ||||| || | |||||| |||| |||||| | || Sbjct: 238 atcgtacctgccaccactcaccgtggaggatcttttgaagcagatcgagtacctgcttcg 297 Query: 242 ctccaagtgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaa 301 ||||||||||||||||| |||||||||||||||||||||||| ||| ||||||| || | Sbjct: 298 atccaagtgggtgccttgtctcgagttcagcaaggttgggttcgtctaccgtgagaacca 357 Query: 302 cgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 | ||||| || |||||||||||| |||| ||||| |||||||||||||| |||||||| Sbjct: 358 caggtctcccggatactacgatggcaggtattggaccatgtggaagctgcccatgttcgg 417 Query: 362 atgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctga 421 |||||||| ||||| ||||||||||| || | || || | |||||||| |||||||| Sbjct: 418 ctgcaccgatgccacccaggtgctcaaggaactcgaagatgccaagaaggcctaccctga 477 Query: 422 cgcgtatgtccgnatcatcggattcgacaac 452 || | |||||| |||||||| ||||||||| Sbjct: 478 tgcctttgtccgtatcatcggcttcgacaac 508
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 287 bits (145), Expect = 2e-74 Identities = 300/352 (85%) Strand = Plus / Minus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 201 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 10080152 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 10080093 Query: 202 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 261 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 10080092 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 10080033 Query: 262 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 321 |||||||||||||||| || ||| ||| ||||||| || || ||| || || ||||||| Sbjct: 10080032 tcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacg 10079973 Query: 322 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 381 ||||| |||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 10079972 atggcaggtactggaccatgtggaagctgcccatgttcgggtgcactgacgccacccagg 10079913 Query: 382 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcg 441 ||||||| ||| | ||||||| |||||||| ||||||||| || | ||||| ||||||| Sbjct: 10079912 tgctcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtccgtatcatcg 10079853 Query: 442 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 | ||||||||| | | ||||||||| | ||||||||||||||| |||||| Sbjct: 10079852 gcttcgacaacgtcaggcaggtgcagctcatcagcttcatcgcctacaagcc 10079801 Score = 266 bits (134), Expect = 6e-68 Identities = 298/353 (84%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 11261928 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 11261987 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 11261988 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 11262047 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||| ||||||| || || ||||| ||||||||| Sbjct: 11262048 ctcgagttcagcaaggttggattcgtctaccgtgagaaccacaggtctcccgggtactac 11262107 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 |||||| |||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 11262108 gatggcaggtattggaccatgtggaagctgcccatgttcggctgcaccgatgccacccag 11262167 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||| ||| | ||||||| |||||||| ||||| || || | |||||| |||||| Sbjct: 11262168 gtgctcaaggagctcgaggaggccaagaaggcctaccccgatgcctttgtccgtatcatc 11262227 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 || ||||||||| | | |||||||||| | ||||||||||||| |||||| Sbjct: 11262228 ggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcc 11262280 Score = 236 bits (119), Expect = 6e-59 Identities = 295/354 (83%) Strand = Plus / Plus Query: 140 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 199 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 11276590 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 11276649 Query: 200 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 259 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 11276650 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 11276709 Query: 260 cctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtacta 319 ||||||||| || ||||| |||||| ||| ||||||| || || |||||||||||||| Sbjct: 11276710 cctcgagtttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 11276769 Query: 320 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 379 |||||| |||||||||| ||||||||||||||||||||||||||||| || ||||| || Sbjct: 11276770 tgatggcaggtactggaccatgtggaagctgcctatgttcggatgcactgatgccaccca 11276829 Query: 380 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcat 439 ||||||||| ||| | ||||||| |||||||| || || || || | ||| || ||||| Sbjct: 11276830 ggtgctcaaggagctcgaggaggccaagaaggcatatccagatgcatttgttcgcatcat 11276889 Query: 440 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||| ||||||||| | | |||||||||| | ||||||||||||| |||||| Sbjct: 11276890 cggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcc 11276943 Score = 165 bits (83), Expect = 2e-37 Identities = 130/143 (90%), Gaps = 2/143 (1%) Strand = Plus / Plus Query: 5 cccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccacc 62 ||||||||||||||||| |||||| ||||||| ||||| ||| |||||||||| |||||| Sbjct: 11276336 cccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaatccacc 11276395 Query: 63 gccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggt 122 ||||| || ||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 11276396 gccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagcaacggt 11276455 Query: 123 ggaaggatcaggtgcatgcaggt 145 ||||||||||| || |||||||| Sbjct: 11276456 ggaaggatcagctgtatgcaggt 11276478 Score = 137 bits (69), Expect = 4e-29 Identities = 228/281 (81%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 11319738 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 11319797 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 11319798 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 11319857 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 | |||||||||||||| || ||| ||| ||||||| | || ||| || || ||||| Sbjct: 11319858 ttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatcacccggatactat 11319917 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || |||||||||| |||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 11319918 gacggtaggtactggaccatgtggaaactgcccatgtttggatgcaccgatgccacccaa 11319977 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctga 421 |||||||| ||| | ||||||| ||||||| |||||||| Sbjct: 11319978 gtgctcaaggagctcgaggaggcaaagaaggcataccctga 11320018 Score = 125 bits (63), Expect = 1e-25 Identities = 128/147 (87%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||||||||||||||||| |||||| ||||||| ||||| ||| | ||||||||||| Sbjct: 11261675 ggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtc 11261734 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 ||||||||| || ||||||||||||||||||| | | | || |||||| ||||||||| Sbjct: 11261735 caccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaa 11261794 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 || |||||||||| |||||||||||| Sbjct: 11261795 tggcggaaggatcaagtgcatgcaggt 11261821 Score = 101 bits (51), Expect = 2e-18 Identities = 125/147 (85%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || |||||| || |||||||||| ||| ||||||||||||| Sbjct: 10080398 ggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtc 10080339 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| Sbjct: 10080338 caccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaa 10080279 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 || || |||||||||||||||||||| Sbjct: 10080278 tggcggcaggatcaggtgcatgcaggt 10080252 Score = 81.8 bits (41), Expect = 2e-12 Identities = 115/137 (83%), Gaps = 2/137 (1%) Strand = Plus / Plus Query: 11 gtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccaccgccggc 68 |||||||| || |||||| ||||||| ||||| ||| |||||||||||||||| || ||| Sbjct: 11319503 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 11319562 Query: 69 cttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaagg 128 || || || | ||||||||||| | || | ||| | |||| ||||||||| || |||||| Sbjct: 11319563 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 11319622 Query: 129 atcaggtgcatgcaggt 145 ||||| ||||||||||| Sbjct: 11319623 atcagatgcatgcaggt 11319639 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 306 tctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgc 365 |||||||||||||| |||||| |||||||||| || ||||| ||||| |||||||| ||| Sbjct: 11266704 tctcctgggtactatgatggcaggtactggaccatatggaaactgcccatgttcggctgc 11266763 Query: 366 accgacgccacacaggtgctcaacgaggtggaggaggtcaagaagg 411 | |||| || |||||| |||| ||| | ||||||| |||||||| Sbjct: 11266764 agcgacaacagccaggtgatcaaggagctcgaggaggccaagaagg 11266809 Score = 75.8 bits (38), Expect = 1e-10 Identities = 99/118 (83%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 29 cctccgtcgctcctttc-aggggctcaagtccaccgccggccttcccgtcagccgccgct 87 ||||||| ||||| ||| ||||||||||||||||||||||||| || || |||||||||| Sbjct: 11264742 cctccgtggctccattccaggggctcaagtccaccgccggcctcccagtgagccgccgct 11264801 Query: 88 ccaacggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||| | | | || ||||| | ||| |||||| |||||||||| |||||||||||| Sbjct: 11264802 ccaccaactcaggcttcggcgacatcaccaacggcggaaggatcaagtgcatgcaggt 11264859
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 287 bits (145), Expect = 2e-74 Identities = 300/352 (85%) Strand = Plus / Minus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 201 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 10080037 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 10079978 Query: 202 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 261 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 10079977 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 10079918 Query: 262 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 321 |||||||||||||||| || ||| ||| ||||||| || || ||| || || ||||||| Sbjct: 10079917 tcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacg 10079858 Query: 322 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 381 ||||| |||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 10079857 atggcaggtactggaccatgtggaagctgcccatgttcgggtgcactgacgccacccagg 10079798 Query: 382 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcg 441 ||||||| ||| | ||||||| |||||||| ||||||||| || | ||||| ||||||| Sbjct: 10079797 tgctcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtccgtatcatcg 10079738 Query: 442 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 | ||||||||| | | ||||||||| | ||||||||||||||| |||||| Sbjct: 10079737 gcttcgacaacgtcaggcaggtgcagctcatcagcttcatcgcctacaagcc 10079686 Score = 266 bits (134), Expect = 6e-68 Identities = 298/353 (84%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 11261599 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 11261658 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 11261659 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 11261718 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||| ||||||| || || ||||| ||||||||| Sbjct: 11261719 ctcgagttcagcaaggttggattcgtctaccgtgagaaccacaggtctcccgggtactac 11261778 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 |||||| |||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 11261779 gatggcaggtattggaccatgtggaagctgcccatgttcggctgcaccgatgccacccag 11261838 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||| ||| | ||||||| |||||||| ||||| || || | |||||| |||||| Sbjct: 11261839 gtgctcaaggagctcgaggaggccaagaaggcctaccccgatgcctttgtccgtatcatc 11261898 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 || ||||||||| | | |||||||||| | ||||||||||||| |||||| Sbjct: 11261899 ggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcc 11261951 Score = 236 bits (119), Expect = 6e-59 Identities = 295/354 (83%) Strand = Plus / Plus Query: 140 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 199 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 11276261 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 11276320 Query: 200 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 259 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 11276321 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 11276380 Query: 260 cctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtacta 319 ||||||||| || ||||| |||||| ||| ||||||| || || |||||||||||||| Sbjct: 11276381 cctcgagtttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 11276440 Query: 320 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 379 |||||| |||||||||| ||||||||||||||||||||||||||||| || ||||| || Sbjct: 11276441 tgatggcaggtactggaccatgtggaagctgcctatgttcggatgcactgatgccaccca 11276500 Query: 380 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcat 439 ||||||||| ||| | ||||||| |||||||| || || || || | ||| || ||||| Sbjct: 11276501 ggtgctcaaggagctcgaggaggccaagaaggcatatccagatgcatttgttcgcatcat 11276560 Query: 440 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||| ||||||||| | | |||||||||| | ||||||||||||| |||||| Sbjct: 11276561 cggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcc 11276614 Score = 165 bits (83), Expect = 2e-37 Identities = 130/143 (90%), Gaps = 2/143 (1%) Strand = Plus / Plus Query: 5 cccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccacc 62 ||||||||||||||||| |||||| ||||||| ||||| ||| |||||||||| |||||| Sbjct: 11276007 cccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaatccacc 11276066 Query: 63 gccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggt 122 ||||| || ||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 11276067 gccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagcaacggt 11276126 Query: 123 ggaaggatcaggtgcatgcaggt 145 ||||||||||| || |||||||| Sbjct: 11276127 ggaaggatcagctgtatgcaggt 11276149 Score = 137 bits (69), Expect = 4e-29 Identities = 275/344 (79%) Strand = Plus / Plus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 11319409 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 11319468 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 11319469 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 11319528 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 | |||||||||||||| || ||| ||| ||||||| | || ||| || || ||||| Sbjct: 11319529 ttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatcacccggatactat 11319588 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || |||||||||| |||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 11319589 gacggtaggtactggaccatgtggaaactgcccatgtttggatgcaccgatgccacccaa 11319648 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||| ||| | ||||||| ||||||| |||||||| || | || || ||||| Sbjct: 11319649 gtgctcaaggagctcgaggaggcaaagaaggcataccctgatgccttcgttcgcatcatt 11319708 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgc 484 || || |||||| | | |||||||||| ||||||||||||| Sbjct: 11319709 ggctttgacaacgttaggcaggtgcagttaatcagcttcatcgc 11319752 Score = 125 bits (63), Expect = 1e-25 Identities = 128/147 (87%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||||||||||||||||| |||||| ||||||| ||||| ||| | ||||||||||| Sbjct: 11261346 ggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtc 11261405 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 ||||||||| || ||||||||||||||||||| | | | || |||||| ||||||||| Sbjct: 11261406 caccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaa 11261465 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 || |||||||||| |||||||||||| Sbjct: 11261466 tggcggaaggatcaagtgcatgcaggt 11261492 Score = 101 bits (51), Expect = 2e-18 Identities = 125/147 (85%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || |||||| || |||||||||| ||| ||||||||||||| Sbjct: 10080283 ggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtc 10080224 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| Sbjct: 10080223 caccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaa 10080164 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 || || |||||||||||||||||||| Sbjct: 10080163 tggcggcaggatcaggtgcatgcaggt 10080137 Score = 81.8 bits (41), Expect = 2e-12 Identities = 115/137 (83%), Gaps = 2/137 (1%) Strand = Plus / Plus Query: 11 gtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccaccgccggc 68 |||||||| || |||||| ||||||| ||||| ||| |||||||||||||||| || ||| Sbjct: 11319174 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 11319233 Query: 69 cttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaagg 128 || || || | ||||||||||| | || | ||| | |||| ||||||||| || |||||| Sbjct: 11319234 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 11319293 Query: 129 atcaggtgcatgcaggt 145 ||||| ||||||||||| Sbjct: 11319294 atcagatgcatgcaggt 11319310 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Plus Query: 306 tctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgc 365 |||||||||||||| |||||| |||||||||| || ||||| ||||| |||||||| ||| Sbjct: 11266375 tctcctgggtactatgatggcaggtactggaccatatggaaactgcccatgttcggctgc 11266434 Query: 366 accgacgccacacaggtgctcaacgaggtggaggaggtcaagaagg 411 | |||| || |||||| |||| ||| | ||||||| |||||||| Sbjct: 11266435 agcgacaacagccaggtgatcaaggagctcgaggaggccaagaagg 11266480 Score = 75.8 bits (38), Expect = 1e-10 Identities = 99/118 (83%), Gaps = 1/118 (0%) Strand = Plus / Plus Query: 29 cctccgtcgctcctttc-aggggctcaagtccaccgccggccttcccgtcagccgccgct 87 ||||||| ||||| ||| ||||||||||||||||||||||||| || || |||||||||| Sbjct: 11264413 cctccgtggctccattccaggggctcaagtccaccgccggcctcccagtgagccgccgct 11264472 Query: 88 ccaacggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||| | | | || ||||| | ||| |||||| |||||||||| |||||||||||| Sbjct: 11264473 ccaccaactcaggcttcggcgacatcaccaacggcggaaggatcaagtgcatgcaggt 11264530
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 287 bits (145), Expect = 2e-74 Identities = 300/352 (85%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 201 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 82469 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 82528 Query: 202 gcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcc 261 | ||||| |||||| |||||| |||| |||||| |||| |||||||||||||| |||| Sbjct: 82529 ccgtggaggacctcctgaagcagatcgagtacctgctccgttccaagtgggtgccctgcc 82588 Query: 262 tcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactacg 321 |||||||||||||||| || ||| ||| ||||||| || || ||| || || ||||||| Sbjct: 82589 tcgagttcagcaaggtcggattcgtctaccgtgagaaccacagatcccccggatactacg 82648 Query: 322 atggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacagg 381 ||||| |||||||||| |||||||||||||| |||||||| ||||| |||||||| |||| Sbjct: 82649 atggcaggtactggaccatgtggaagctgcccatgttcgggtgcactgacgccacccagg 82708 Query: 382 tgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcg 441 ||||||| ||| | ||||||| |||||||| ||||||||| || | ||||| ||||||| Sbjct: 82709 tgctcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtccgtatcatcg 82768 Query: 442 gattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 | ||||||||| | | ||||||||| | ||||||||||||||| |||||| Sbjct: 82769 gcttcgacaacgtcaggcaggtgcagctcatcagcttcatcgcctacaagcc 82820 Score = 101 bits (51), Expect = 2e-18 Identities = 125/147 (85%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || |||||| || |||||||||| ||| ||||||||||||| Sbjct: 82223 ggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtc 82282 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| Sbjct: 82283 caccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaa 82342 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 || || |||||||||||||||||||| Sbjct: 82343 tggcggcaggatcaggtgcatgcaggt 82369
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 266 bits (134), Expect = 6e-68 Identities = 298/353 (84%) Strand = Plus / Minus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 110126 caggtgtggccaattgagggcatcaagaagttcgagaccctatcgtacctgccaccactc 110067 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 | | ||||| || | |||||| |||| |||||| | || |||||||||||||||||| Sbjct: 110066 accgtggaggatcttttgaagcagatcgagtacctgcttcgatccaagtgggtgccttgc 110007 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 |||||||||||||||||||| ||| ||| ||||||| || || ||||| ||||||||| Sbjct: 110006 ctcgagttcagcaaggttggattcgtctaccgtgagaaccacaggtctcccgggtactac 109947 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 |||||| |||| ||||| |||||||||||||| |||||||| |||||||| ||||| ||| Sbjct: 109946 gatggcaggtattggaccatgtggaagctgcccatgttcggctgcaccgatgccacccag 109887 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||| ||| | ||||||| |||||||| ||||| || || | |||||| |||||| Sbjct: 109886 gtgctcaaggagctcgaggaggccaagaaggcctaccccgatgcctttgtccgtatcatc 109827 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 || ||||||||| | | |||||||||| | ||||||||||||| |||||| Sbjct: 109826 ggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcc 109774 Score = 236 bits (119), Expect = 6e-59 Identities = 295/354 (83%) Strand = Plus / Minus Query: 140 gcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccact 199 |||||||||||| || || |||||||||||||| ||||||||||| ||| ||||||| || Sbjct: 95464 gcaggtgtggccgattgaaggcatcaagaagtttgagaccctgtcgtacctgccaccgct 95405 Query: 200 cagcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttg 259 || |||| |||| | |||||| |||| |||||| |||| ||||| ||||||||||| Sbjct: 95404 cacggtcgaggacctcttgaagcagatcgagtacctgctccggtccaaatgggtgccttg 95345 Query: 260 cctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtacta 319 ||||||||| || ||||| |||||| ||| ||||||| || || |||||||||||||| Sbjct: 95344 cctcgagtttagtaaggtcgggttcgtctaccgtgagaaccacaggtctcctgggtacta 95285 Query: 320 cgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacaca 379 |||||| |||||||||| ||||||||||||||||||||||||||||| || ||||| || Sbjct: 95284 tgatggcaggtactggaccatgtggaagctgcctatgttcggatgcactgatgccaccca 95225 Query: 380 ggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcat 439 ||||||||| ||| | ||||||| |||||||| || || || || | ||| || ||||| Sbjct: 95224 ggtgctcaaggagctcgaggaggccaagaaggcatatccagatgcatttgttcgcatcat 95165 Query: 440 cggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||| ||||||||| | | |||||||||| | ||||||||||||| |||||| Sbjct: 95164 cggcttcgacaacgtcaggcaggtgcagttgattagcttcatcgcctacaagcc 95111 Score = 165 bits (83), Expect = 2e-37 Identities = 130/143 (90%), Gaps = 2/143 (1%) Strand = Plus / Minus Query: 5 cccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccacc 62 ||||||||||||||||| |||||| ||||||| ||||| ||| |||||||||| |||||| Sbjct: 95718 cccaccgtgatggcctcgtcggccacctccgttgctcccttccaggggctcaaatccacc 95659 Query: 63 gccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggt 122 ||||| || ||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 95658 gccgggctccccgtcagccgccgctccaacagcgccggcctcggcagcgtcagcaacggt 95599 Query: 123 ggaaggatcaggtgcatgcaggt 145 ||||||||||| || |||||||| Sbjct: 95598 ggaaggatcagctgtatgcaggt 95576 Score = 137 bits (69), Expect = 4e-29 Identities = 275/344 (79%) Strand = Plus / Minus Query: 141 caggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactc 200 ||||||||||| || |||||||| |||||||||||||| ||||| |||||||| ||| | Sbjct: 52316 caggtgtggccgattgagggcattaagaagttcgagactctgtcgtacttgccgccattg 52257 Query: 201 agcacggaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgc 260 | ||||| ||| | |||||| |||| |||||| |||| || ||||||||||||||| Sbjct: 52256 acagtggaggaccttttgaagcagatcgagtacctgctccgatctaagtgggtgccttgc 52197 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 | |||||||||||||| || ||| ||| ||||||| | || ||| || || ||||| Sbjct: 52196 ttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatcacccggatactat 52137 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || || |||||||||| |||||||| ||||| ||||| ||||||||||| ||||| || Sbjct: 52136 gacggtaggtactggaccatgtggaaactgcccatgtttggatgcaccgatgccacccaa 52077 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 |||||||| ||| | ||||||| ||||||| |||||||| || | || || ||||| Sbjct: 52076 gtgctcaaggagctcgaggaggcaaagaaggcataccctgatgccttcgttcgcatcatt 52017 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgc 484 || || |||||| | | |||||||||| ||||||||||||| Sbjct: 52016 ggctttgacaacgttaggcaggtgcagttaatcagcttcatcgc 51973 Score = 125 bits (63), Expect = 1e-25 Identities = 128/147 (87%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||||||||||||||||| |||||| ||||||| ||||| ||| | ||||||||||| Sbjct: 110379 ggcccccaccgtgatggcctcctcggccacctccgtggctccattccaagggctcaagtc 110320 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 ||||||||| || ||||||||||||||||||| | | | || |||||| ||||||||| Sbjct: 110319 caccgccgggctccccgtcagccgccgctccaccaactcgggcttcggcaacgtcagcaa 110260 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 || |||||||||| |||||||||||| Sbjct: 110259 tggcggaaggatcaagtgcatgcaggt 110233 Score = 81.8 bits (41), Expect = 2e-12 Identities = 115/137 (83%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 11 gtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccaccgccggc 68 |||||||| || |||||| ||||||| ||||| ||| |||||||||||||||| || ||| Sbjct: 52551 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 52492 Query: 69 cttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaagg 128 || || || | ||||||||||| | || | ||| | |||| ||||||||| || |||||| Sbjct: 52491 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 52432 Query: 129 atcaggtgcatgcaggt 145 ||||| ||||||||||| Sbjct: 52431 atcagatgcatgcaggt 52415 Score = 75.8 bits (38), Expect = 1e-10 Identities = 99/118 (83%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 29 cctccgtcgctcctttc-aggggctcaagtccaccgccggccttcccgtcagccgccgct 87 ||||||| ||||| ||| ||||||||||||||||||||||||| || || |||||||||| Sbjct: 107312 cctccgtggctccattccaggggctcaagtccaccgccggcctcccagtgagccgccgct 107253 Query: 88 ccaacggcgctagcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 ||| | | | || ||||| | ||| |||||| |||||||||| |||||||||||| Sbjct: 107252 ccaccaactcaggcttcggcgacatcaccaacggcggaaggatcaagtgcatgcaggt 107195 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/106 (83%) Strand = Plus / Minus Query: 306 tctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgc 365 |||||||||||||| |||||| |||||||||| || ||||| ||||| |||||||| ||| Sbjct: 105350 tctcctgggtactatgatggcaggtactggaccatatggaaactgcccatgttcggctgc 105291 Query: 366 accgacgccacacaggtgctcaacgaggtggaggaggtcaagaagg 411 | |||| || |||||| |||| ||| | ||||||| |||||||| Sbjct: 105290 agcgacaacagccaggtgatcaaggagctcgaggaggccaagaagg 105245
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 228 bits (115), Expect = 1e-56 Identities = 290/346 (83%), Gaps = 2/346 (0%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 201 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 492 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 551 Query: 202 gcacggaggccctccttaagcaggtcgactacct-gatccgctccaagtgggtgccttgc 260 | ||||| |||||| |||||| |||| ||||| | |||| ||||||||| |||| ||| Sbjct: 552 ccgtggaggacctcctgaagcagatcgagtacctagctccgttccaagtgg-tgccctgc 610 Query: 261 ctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctcctgggtactac 320 ||||||||||||||||| || || ||| ||||||| || || || ||||| |||||| Sbjct: 611 ctcgagttcagcaaggtcggatttgtctaccgtgagaaccacaagtcccctggatactac 670 Query: 321 gatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacag 380 || ||| |||||||||| |||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 671 gacggcaggtactggaccatgtggaagctgcccatgttcgggtgcaccgacgccacccag 730 Query: 381 gtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatc 440 || |||| ||| | ||||||| |||||||| ||||||||| || | ||||| |||||| Sbjct: 731 gtcgtcaaggagctcgaggaggccaagaaggcgtaccctgatgcattcgtccgtatcatc 790 Query: 441 ggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgcct 486 || ||||||||| | | ||||||||| | ||||||||||||||| Sbjct: 791 ggcttcgacaacgttaggcaggtgcagctcatcagcttcatcgcct 836 Score = 65.9 bits (33), Expect = 1e-07 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttcaggggctcaagtcc 59 ||||||| |||||||||| || |||||| || |||||||||| ||| |||||||||||| Sbjct: 263 ggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccagggctcaagtcc 322 Query: 60 accgccggc 68 ||||||||| Sbjct: 323 accgccggc 331 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 aggatcaggtgcatgcaggt 145 |||||||||||||||||||| Sbjct: 384 aggatcaggtgcatgcaggt 403
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 208 bits (105), Expect = 1e-50 Identities = 385/476 (80%), Gaps = 2/476 (0%) Strand = Plus / Plus Query: 11 gtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccaccgccggc 68 |||||||| || |||||| ||||||| ||||| ||| |||||||||||||||| || ||| Sbjct: 77 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 136 Query: 69 cttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaagg 128 || || || | ||||||||||| | || | ||| | |||| ||||||||| || |||||| Sbjct: 137 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 196 Query: 129 atcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttac 188 ||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 197 atcagatgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtac 256 Query: 189 ttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaag 248 ||||| ||| | | ||||| ||| | |||||| |||| |||||| |||| || ||| Sbjct: 257 ttgccgccattgacagtggaggaccttttgaagcagatcgagtacctgctccgatctaag 316 Query: 249 tgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatct 308 |||||||||||| | |||||||||||||| || ||| ||| ||||||| | || ||| Sbjct: 317 tgggtgccttgcttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatca 376 Query: 309 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 368 || || ||||| || || |||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 377 cccggatactatgacggtaggtactggaccatgtggaaactgcccatgtttggatgcacc 436 Query: 369 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 428 || ||||| || |||||||| ||| | ||||||| ||||||| |||||||| || | Sbjct: 437 gatgccacccaagtgctcaaggagctcgaggaggcaaagaaggcataccctgatgccttc 496 Query: 429 gtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgc 484 || || ||||| || || |||||| | | |||||||||| ||||||||||||| Sbjct: 497 gttcgcatcattggctttgacaacgttaggcaggtgcagttaatcagcttcatcgc 552
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 208 bits (105), Expect = 1e-50 Identities = 385/476 (80%), Gaps = 2/476 (0%) Strand = Plus / Plus Query: 11 gtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccaccgccggc 68 |||||||| || |||||| ||||||| ||||| ||| |||||||||||||||| || ||| Sbjct: 79 gtgatggcttcgtcggccacctccgtggctcccttccaggggctcaagtccactgcgggc 138 Query: 69 cttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaagg 128 || || || | ||||||||||| | || | ||| | |||| ||||||||| || |||||| Sbjct: 139 ctcccggtgaaccgccgctccagcagctcgagctttggcaacgtcagcaatggcggaagg 198 Query: 129 atcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttac 188 ||||| ||||||||||||||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 199 atcagatgcatgcaggtgtggccgattgagggcattaagaagttcgagactctgtcgtac 258 Query: 189 ttgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaag 248 ||||| ||| | | ||||| ||| | |||||| |||| |||||| |||| || ||| Sbjct: 259 ttgccgccattgacagtggaggaccttttgaagcagatcgagtacctgctccgatctaag 318 Query: 249 tgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatct 308 |||||||||||| | |||||||||||||| || ||| ||| ||||||| | || ||| Sbjct: 319 tgggtgccttgcttggagttcagcaaggtcggattcgtctaccgtgagaatcacagatca 378 Query: 309 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 368 || || ||||| || || |||||||||| |||||||| ||||| ||||| ||||||||| Sbjct: 379 cccggatactatgacggtaggtactggaccatgtggaaactgcccatgtttggatgcacc 438 Query: 369 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 428 || ||||| || |||||||| ||| | ||||||| ||||||| |||||||| || | Sbjct: 439 gatgccacccaagtgctcaaggagctcgaggaggcaaagaaggcataccctgatgccttc 498 Query: 429 gtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgc 484 || || ||||| || || |||||| | | |||||||||| ||||||||||||| Sbjct: 499 gttcgcatcattggctttgacaacgttaggcaggtgcagttaatcagcttcatcgc 554
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 159 bits (80), Expect = 1e-35 Identities = 303/374 (81%), Gaps = 5/374 (1%) Strand = Plus / Plus Query: 12 tgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccaccgccggcc 69 |||||||||| |||||| || |||||||||| ||| |||||||||||||||||||| ||| Sbjct: 82 tgatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcc 141 Query: 70 ttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaagga 129 | |||||| |||||||||| | | |||||||||| |||||||||||| ||||||| Sbjct: 142 tccccgtcgcccgccgctcctccaga---agcctcggcaacgtcagcaacggcggaagga 198 Query: 130 tcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttact 189 || ||||||||||||||||||| | | |||| ||||||||||||||| ||||| ||| Sbjct: 199 tccggtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacc 258 Query: 190 tgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagt 249 |||| || || ||||| | ||| || |||||||| ||||||||| | ||| | | Sbjct: 259 tgccgccgctgtcgacggacgacctgctgaagcaggtggactacctgctgcgcaacggct 318 Query: 250 gggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctc 309 || | || |||||||||||||||||||| || ||| | | ||| ||| || | | || | Sbjct: 319 ggataccctgcctcgagttcagcaaggtcggcttcgtgtaccgcgagaactccacctccc 378 Query: 310 ctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccg 369 | | |||||||| ||||| |||||||| |||||||||||||| |||||||| |||| || Sbjct: 379 cgtgctactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaacg 438 Query: 370 acgccacacaggtg 383 ||||||| |||||| Sbjct: 439 acgccacccaggtg 452 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 436 tcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 505 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcc 562
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 159 bits (80), Expect = 1e-35 Identities = 303/374 (81%), Gaps = 5/374 (1%) Strand = Plus / Plus Query: 12 tgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccaccgccggcc 69 |||||||||| |||||| || |||||||||| ||| |||||||||||||||||||| ||| Sbjct: 82 tgatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcc 141 Query: 70 ttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaagga 129 | |||||| |||||||||| | | |||||||||| |||||||||||| ||||||| Sbjct: 142 tccccgtcgcccgccgctcctccaga---agcctcggcaacgtcagcaacggcggaagga 198 Query: 130 tcaggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttact 189 || ||||||||||||||||||| | | |||| ||||||||||||||| ||||| ||| Sbjct: 199 tccggtgcatgcaggtgtggccggcctacggcaacaagaagttcgagacgctgtcgtacc 258 Query: 190 tgccaccactcagcacggaggccctccttaagcaggtcgactacctgatccgctccaagt 249 |||| || || ||||| | ||| || |||||||| ||||||||| | ||| | | Sbjct: 259 tgccgccgctgtcgacggacgacctgctgaagcaggtggactacctgctgcgcaacggct 318 Query: 250 gggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatctc 309 || | || |||||||||||||||||||| || ||| | | ||| ||| || | | || | Sbjct: 319 ggataccctgcctcgagttcagcaaggtcggcttcgtgtaccgcgagaactccacctccc 378 Query: 310 ctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccg 369 | | |||||||| ||||| |||||||| |||||||||||||| |||||||| |||| || Sbjct: 379 cgtgctactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaacg 438 Query: 370 acgccacacaggtg 383 ||||||| |||||| Sbjct: 439 acgccacccaggtg 452 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 436 tcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 505 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcc 562
>emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit (cDNA clone pLg ssu1) Length = 776 Score = 139 bits (70), Expect = 1e-29 Identities = 201/245 (82%) Strand = Plus / Plus Query: 249 tgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatct 308 ||||| || ||| |||||||| ||||| |||||| | | ||||||| ||||||| || Sbjct: 286 tgggttccctgcatcgagttctccaaggaggggttcgtgtaccgtgagaacaacgcgtcg 345 Query: 309 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 368 || ||||||||||| || |||||||||| |||||||||||||| |||||||| |||||| Sbjct: 346 cccgggtactacgacgggaggtactggacgatgtggaagctgcccatgttcggctgcacc 405 Query: 369 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 428 ||||||| |||||| || |||||||||||||| |||||||| ||||| || | Sbjct: 406 gacgccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttc 465 Query: 429 gtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 488 ||| | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| | Sbjct: 466 gtcagaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctac 525 Query: 489 aagcc 493 ||||| Sbjct: 526 aagcc 530 Score = 48.1 bits (24), Expect = 0.028 Identities = 48/56 (85%) Strand = Plus / Plus Query: 135 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 190 ||||||||||||||||| |||||| | ||||||||||||||||| || ||||| Sbjct: 172 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccctctcctactt 227
>emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 764 Score = 139 bits (70), Expect = 1e-29 Identities = 201/245 (82%) Strand = Plus / Plus Query: 249 tgggtgccttgcctcgagttcagcaaggttgggttcatcttccgtgagcacaacgcatct 308 ||||| || ||| |||||||| ||||| |||||| | | ||||||| ||||||| || Sbjct: 271 tgggttccctgcatcgagttctccaaggaggggttcgtgtaccgtgagaacaacgcgtcg 330 Query: 309 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 368 || ||||||||||| || |||||||||| |||||||||||||| |||||||| |||||| Sbjct: 331 cccgggtactacgacgggaggtactggacgatgtggaagctgcccatgttcggctgcacc 390 Query: 369 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 428 ||||||| |||||| || |||||||||||||| |||||||| ||||| || | Sbjct: 391 gacgccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttc 450 Query: 429 gtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 488 ||| | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| | Sbjct: 451 gtcagaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctac 510 Query: 489 aagcc 493 ||||| Sbjct: 511 aagcc 515
>emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 133 bits (67), Expect = 6e-28 Identities = 153/182 (84%) Strand = Plus / Plus Query: 312 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 428 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 487 Query: 372 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 431 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 488 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtacttcgtc 547 Query: 432 cgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 491 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 548 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 607 Query: 492 cc 493 || Sbjct: 608 cc 609 Score = 50.1 bits (25), Expect = 0.007 Identities = 58/69 (84%) Strand = Plus / Plus Query: 113 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 172 ||||||||| || ||| | || ||||||||||||||||| |||||| | |||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctgaagaagtt 206 Query: 173 cgagaccct 181 ||||||||| Sbjct: 207 cgagaccct 215
>emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 133 bits (67), Expect = 6e-28 Identities = 153/182 (84%) Strand = Plus / Plus Query: 312 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 426 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 485 Query: 372 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 431 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 486 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtacttcgtc 545 Query: 432 cgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 491 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 546 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 605 Query: 492 cc 493 || Sbjct: 606 cc 607 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 135 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 181 ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctgaagaagttcgagaccct 215
>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 800 Score = 133 bits (67), Expect = 6e-28 Identities = 153/182 (84%) Strand = Plus / Plus Query: 312 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 447 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 506 Query: 372 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 431 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 507 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttcgtc 566 Query: 432 cgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 491 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 567 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 626 Query: 492 cc 493 || Sbjct: 627 cc 628 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 113 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 172 ||||||||| || ||| | || ||||||||||||||||| |||||| |||||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctcaagaagtt 206 Query: 173 cgagaccct 181 ||||||||| Sbjct: 207 cgagaccct 215
>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 858 Score = 133 bits (67), Expect = 6e-28 Identities = 153/182 (84%) Strand = Plus / Plus Query: 312 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 423 gggtactacgacgggcggtactggacgatgtggaagctgcccatgttcggctgcaccgac 482 Query: 372 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 431 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 483 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtatttcgtc 542 Query: 432 cgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 491 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 543 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 602 Query: 492 cc 493 || Sbjct: 603 cc 604 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 113 cagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgagggcatcaagaagtt 172 ||||||||| || ||| | || ||||||||||||||||| |||||| |||||||||| Sbjct: 147 cagcaacggcggcagggttagctgcatgcaggtgtggccgccggagggcctcaagaagtt 206 Query: 173 cgagaccct 181 ||||||||| Sbjct: 207 cgagaccct 215
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS1) mRNA, complete cds Length = 853 Score = 133 bits (67), Expect = 6e-28 Identities = 153/182 (84%) Strand = Plus / Plus Query: 312 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 417 gggtactacgacgggcggtactggaccatgtggaagctgcccatgttcgggtgcaccgac 476 Query: 372 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 431 || |||||| || |||||||||||| ||||||||||||||| |||| | || Sbjct: 477 gctgtgcaggtggcgaaggaggtggaggagtgcaagaaggagtacccccacgccttcatc 536 Query: 432 cgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 491 || |||||||| |||||||||| || |||||||||||| |||| |||||||||| |||| Sbjct: 537 cgcatcatcggcttcgacaacaaccgccaggtgcagtgcatcagtttcatcgcctacaag 596 Query: 492 cc 493 || Sbjct: 597 cc 598 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 134 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtc 184 ||||||| |||||||||| ||||||||| | |||||||| ||||||||||| Sbjct: 239 gtgcatgaaggtgtggccgatcgagggcgtgaagaagtttgagaccctgtc 289
>gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 195 Score = 129 bits (65), Expect = 9e-27 Identities = 145/169 (85%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 207 gaggccctccttaagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgag 266 ||||||||||| |||||| |||||| ||||||||||||| ||||| || ||| | ||| Sbjct: 28 gaggccctcctgaagcagatcgactttttgatccgctccaaatgggttccctgcttggag 87 Query: 267 ttcagcaaggttgggttcatcttccgtgagcacaac-gcatctcctgggtactacgatgg 325 |||||||||||||| ||||||||||||||| | | ||| |||| || |||||||| || Sbjct: 88 ttcagcaaggttggcttcatcttccgtgagttcggcagca-ctcccggatactacgacgg 146 Query: 326 ccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 | ||||||||||||||||||||||||| |||||||| ||||| |||||| Sbjct: 147 caggtactggacaatgtggaagctgcccatgttcggctgcactgacgcc 195
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 129 bits (65), Expect = 9e-27 Identities = 230/285 (80%) Strand = Plus / Plus Query: 99 agcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggtgtggcccatcgag 158 |||||||||| |||||||||||| ||||||||| ||||||||||||||||||| | | Sbjct: 288 agcctcggcaacgtcagcaacggcggaaggatccggtgcatgcaggtgtggccggcctac 347 Query: 159 ggcatcaagaagttcgagaccctgtcttacttgccaccactcagcacggaggccctcctt 218 |||| ||||||||||||||| ||||| ||| |||| || || ||||| | ||| || Sbjct: 348 ggcaacaagaagttcgagacgctgtcgtacctgccgccgctgtcgacggacgacctgctg 407 Query: 219 aagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaaggtt 278 |||||||| ||||||||| | ||| | ||| | || |||||||||||||||||| | Sbjct: 408 aagcaggtggactacctgctgcgcaacggctggataccctgcctcgagttcagcaagctc 467 Query: 279 gggttcatcttccgtgagcacaacgcatctcctgggtactacgatggccggtactggaca 338 |||||| | | ||| ||| || | | || || | |||||||| ||||| |||||||| Sbjct: 468 gggttcgtgtaccgcgagaactccacctccccgtgctactacgacggccgctactggacc 527 Query: 339 atgtggaagctgcctatgttcggatgcaccgacgccacacaggtg 383 |||||||||||||| |||||||| |||| ||||||||| |||||| Sbjct: 528 atgtggaagctgcccatgttcggctgcaacgacgccacccaggtg 572 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 436 tcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 625 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcc 682
>emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 936 Score = 117 bits (59), Expect = 4e-23 Identities = 151/182 (82%) Strand = Plus / Plus Query: 312 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| || |||||||||| ||||||||| |||| |||||||| ||||||||| Sbjct: 404 gggtactacgacgggaggtactggacgatgtggaagttgcccatgttcggctgcaccgac 463 Query: 372 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 431 |||| |||||| || |||||||||||||| |||||||| ||||| || | ||| Sbjct: 464 gccagccaggtgatcgccgaggtggaggaggccaagaaggcctaccccgagtacttcgtc 523 Query: 432 cgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 491 | |||||||| |||||||||| ||| || || |||||| ||||||||||||||| |||| Sbjct: 524 agaatcatcggcttcgacaacaagcgccaagtccagtgcatcagcttcatcgcctacaag 583 Query: 492 cc 493 || Sbjct: 584 cc 585 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 135 tgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 181 ||||||||||||||||| |||||| |||||||||| |||||||| Sbjct: 169 tgcatgcaggtgtggccgccggagggcctcaagaagtttgagaccct 215
>emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate carboxylase small subunit percursor (rbcs gene) Length = 686 Score = 117 bits (59), Expect = 4e-23 Identities = 139/166 (83%) Strand = Plus / Plus Query: 328 ggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctca 387 |||||||||| |||||||||||||| |||||||| ||||| |||||||| ||||| || Sbjct: 416 ggtactggaccatgtggaagctgcccatgttcgggtgcactgacgccacccaggttgtcg 475 Query: 388 acgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcg 447 |||| | ||||||| ||||||| ||||| | || | ||||| || |||||||||| Sbjct: 476 ccgagctcgaggaggctaagaaggcttacccacatgctttcgtccgcattatcggattcg 535 Query: 448 acaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||| | ||||| ||||||||||||||||||||||||| |||||| Sbjct: 536 acaacgtccgtcaagtgcagtgcgtcagcttcatcgcctacaagcc 581
>gb|L10212.1|CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1) rubisco small subunit gene, complete cds Length = 3552 Score = 103 bits (52), Expect = 5e-19 Identities = 147/179 (82%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 2349 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 2408 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | |||||| || ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 2409 tcccaggtggtcgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 2468 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 |||||||||||||||||| ||||||| || ||||| |||| |||||||||| |||||| Sbjct: 2469 atcatcggattcgacaacgtgcgtcaagtacagtgtatcagtttcatcgcctacaagcc 2527
>dbj|AB067656.1| Oryza sativa (japonica cultivar-group) OsrbcS gene for small subunit of ribulose-1,5-bisphosphate carboxylase, promoter region and partial cds Length = 1815 Score = 101 bits (51), Expect = 2e-18 Identities = 125/147 (85%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 1 ggcccccaccgtgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtc 58 ||||||| |||||||||| || |||||| || |||||||||| ||| ||||||||||||| Sbjct: 1553 ggccccctccgtgatggcgtcgtcggccaccaccgtcgctcccttccaggggctcaagtc 1612 Query: 59 caccgccggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaa 118 |||||||||| | |||||| |||||||||| | | | ||| |||||| ||||||||| Sbjct: 1613 caccgccggcatgcccgtcgcccgccgctccggcaactccagcttcggcaacgtcagcaa 1672 Query: 119 cggtggaaggatcaggtgcatgcaggt 145 || || |||||||||||||||||||| Sbjct: 1673 tggcggcaggatcaggtgcatgcaggt 1699
>dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 790 Score = 99.6 bits (50), Expect = 8e-18 Identities = 151/185 (81%) Strand = Plus / Plus Query: 312 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 |||||||| || || || ||||||||||||||||||||||| ||||| |||||||| || Sbjct: 392 gggtactatgacggacgttactggacaatgtggaagctgcccatgtttggatgcactgat 451 Query: 372 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 431 | | |||||| | || || || |||||| ||||||||||||||| | || || || Sbjct: 452 tcatctcaggtgttgaaagaagtagaggagtgcaagaaggagtacccaaatgcatacatc 511 Query: 432 cgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 491 || || || |||||||||||| | ||||| ||||||||| |||| ||||| ||||||||| Sbjct: 512 cgaattattggattcgacaacgtccgtcaagtgcagtgcatcagtttcattgccttcaag 571 Query: 492 ccacc 496 ||||| Sbjct: 572 ccacc 576 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 165 aagaagttcgagaccctgtcttacttgccaccactca 201 |||||||||||||| ||||||||| | |||| ||||| Sbjct: 242 aagaagttcgagactctgtcttacctcccacaactca 278
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 99.6 bits (50), Expect = 8e-18 Identities = 117/136 (86%), Gaps = 5/136 (3%) Strand = Plus / Plus Query: 12 tgatggcctcatcggcc-cctccgtcgctcctttc-aggggctcaagtccaccgccggcc 69 |||||||||| |||||| || |||||||||| ||| |||||||||||||||||||| ||| Sbjct: 507 tgatggcctcgtcggccaccgccgtcgctccgttccaggggctcaagtccaccgccagcc 566 Query: 70 ttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtggaagga 129 | |||||| |||||||||| | | |||||||||| |||||||||||| ||||||| Sbjct: 567 tccccgtcgcccgccgctcctccag---aagcctcggcaacgtcagcaacggcggaagga 623 Query: 130 tcaggtgcatgcaggt 145 || ||||||||||||| Sbjct: 624 tccggtgcatgcaggt 639 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 |||||||| ||||| |||||||| |||||||||||||| |||||||| |||| ||||||| Sbjct: 969 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaacgacgcc 1028 Query: 375 acacaggtg 383 || |||||| Sbjct: 1029 acccaggtg 1037 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 436 tcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||| ||||||||||| ||| ||||||||||||||||||||||| |||||| Sbjct: 1090 tcatcggcttcgacaacatcaagcagacgcagtgcgtcagcttcatcgcctacaagcc 1147
>gb|BC038257.1| Mus musculus cDNA clone MGC:47002 IMAGE:5148367, complete cds Length = 763 Score = 97.6 bits (49), Expect = 3e-17 Identities = 165/204 (80%) Strand = Plus / Plus Query: 290 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 349 ||||||||||||| ||| || || ||||| ||||| || |||||||| ||||||||| | Sbjct: 379 ccgtgagcacaacaaatcgccaggatactatgatggtcgctactggactatgtggaagtt 438 Query: 350 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 409 |||||||||||| ||||| ||| | | |||||| | || ||||| |||||||||||||| Sbjct: 439 gcctatgttcgggtgcactgacccagctcaggtggtgaatgaggttgaggaggtcaagaa 498 Query: 410 ggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtg 469 || |||||||| || | ||| | ||||| || |||||||||| ||||| ||||| || Sbjct: 499 ggcttaccctgatgcttttgttaggatcattgggttcgacaacaaacgtcaagtgcaatg 558 Query: 470 cgtcagcttcatcgccttcaagcc 493 | | || ||||| |||| |||||| Sbjct: 559 cattagtttcattgcctacaagcc 582 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 165 aagaagttcgagaccctgtcttacttgccaccactca 201 ||||||||||||||||| |||||| | ||||| |||| Sbjct: 251 aagaagttcgagaccctctcttaccttccacctctca 287
>gb|AF039015.1|AF039015 Fritillaria agrestis clone TA1 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 97.6 bits (49), Expect = 3e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcggtactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 6.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccct 181 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039013.1|AF039013 Fritillaria agrestis clone TA26 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 97.6 bits (49), Expect = 3e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcggtactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 6.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccct 181 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039009.1|AF039009 Fritillaria agrestis clone TA23 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 97.6 bits (49), Expect = 3e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatggacggtactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 6.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccct 181 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF024574.1|AF024574 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type III (rbcS3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 97.6 bits (49), Expect = 3e-17 Identities = 55/57 (96%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 363 atctcctgggtactacgatgggcggtactggacaatgtggaagctgcccatgttcgg 419 Score = 40.1 bits (20), Expect = 6.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 181 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 192 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 239
>gb|L24497.1|PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, complete cds Length = 813 Score = 97.6 bits (49), Expect = 3e-17 Identities = 165/204 (80%) Strand = Plus / Plus Query: 290 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 349 ||||||| ||||| ||| || || ||||| ||||| |||||||||||||||||||||| Sbjct: 349 ccgtgagaacaacagatccccaggatactatgatggaaggtactggacaatgtggaagct 408 Query: 350 gcctatgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaa 409 ||| |||||||||||||||||| | | |||||| | || ||| |||| |||| |||||| Sbjct: 409 gcccatgttcggatgcaccgactcttcccaggtgttgaaagagctggaagaggccaagaa 468 Query: 410 ggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggtgcagtg 469 || ||||| | | | |||| ||||||||||||||||| | ||||| |||||||| Sbjct: 469 ggcctacccccaatccttcatccgtatcatcggattcgacaatgtccgtcaagtgcagtg 528 Query: 470 cgtcagcttcatcgccttcaagcc 493 | |||| |||||||| | |||||| Sbjct: 529 catcagtttcatcgcttacaagcc 552 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 aagaagttcgagaccctgtcttac 188 ||||||||||||||||| |||||| Sbjct: 221 aagaagttcgagaccctctcttac 244
>dbj|D00572.1|PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO small subunit, complete cds Length = 844 Score = 95.6 bits (48), Expect = 1e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 406 tactatgatggaaggtactggacaatgtggaagctgcccatgttcggatgcaccgactct 465 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | |||||| | || ||| |||| |||| |||||||| ||||| | | | |||| Sbjct: 466 tcccaggtgttgaaggagctggaagaggccaagaaggcttacccccagtccttcatccgt 525 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||| | ||||| ||||||||| |||| |||||||| | |||||| Sbjct: 526 atcatcggattcgacaatgtccgtcaagtgcagtgcatcagtttcatcgcttacaagcc 584 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 aagaagttcgagaccctgtcttac 188 ||||||||||||||||| |||||| Sbjct: 253 aagaagttcgagaccctctcttac 276
>emb|X65494.1|MSCARB Malus (unidentified species of crab apple) mRNA for rubisco-1,5-bisphosphate carboxylase Length = 853 Score = 95.6 bits (48), Expect = 1e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 410 tactatgatggaaggtactggacaatgtggaagctgcccatgttcggatgcaccgactct 469 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | |||||| | || ||| |||| |||| |||||||| ||||| | | | |||| Sbjct: 470 tcccaggtgttgaaagagctggaagaggccaagaaggcctacccccaatccttcatccgt 529 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||| | ||||| ||||||||| |||| |||||||| | |||||| Sbjct: 530 atcatcggattcgacaatgtccgtcaagtgcagtgcatcagtttcatcgcttacaagcc 588 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 aagaagttcgagaccctgtcttac 188 ||||||||||||||||| |||||| Sbjct: 257 aagaagttcgagaccctctcttac 280
>gb|M38316.1|CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-2) mRNA, complete cds Length = 680 Score = 95.6 bits (48), Expect = 1e-16 Identities = 146/179 (81%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 380 tactatgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 439 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | |||||| | ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 440 tcccaggtggttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 499 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 |||||||||||||||||| ||||||| || |||||| |||| |||||||||| |||||| Sbjct: 500 atcatcggattcgacaacgtgcgtcaagtacagtgcatcagtttcatcgcctacaagcc 558 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 aagaagttcgagaccctgtcttac 188 |||||||||||||| ||||||||| Sbjct: 227 aagaagttcgagactctgtcttac 250
>gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 968 Score = 93.7 bits (47), Expect = 5e-16 Identities = 148/182 (81%) Strand = Plus / Plus Query: 312 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| || || |||||||| ||||||||| |||| |||||||| ||||||||| Sbjct: 383 gggtactacgacgggcgctactggaccatgtggaagttgcccatgttcgggtgcaccgac 442 Query: 372 gccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtc 431 || | ||||||||||| |||||||| ||| || |||| |||||| ||| | | Sbjct: 443 tcctcccaggtgctcaaggaggtggacgagtgcagtaaggcgtaccccgactacttcaac 502 Query: 432 cgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaag 491 || |||||||| |||||||||| ||| || ||||||||| |||||||| || ||| |||| Sbjct: 503 cggatcatcggcttcgacaacacgcgccaagtgcagtgcatcagcttcctcacctacaag 562 Query: 492 cc 493 || Sbjct: 563 cc 564 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 133 ggtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgc 192 ||||||||||||||||||| ||||||| |||||||||||||||||||| ||| ||| Sbjct: 204 ggtgcatgcaggtgtggccgccggagggcaagaagaagttcgagaccctgtcctacctgc 263 Query: 193 caccactca 201 ||||||||| Sbjct: 264 caccactca 272
>gb|AF044400.1|AF044400 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2A (rbcS-P2A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 534 Score = 91.7 bits (46), Expect = 2e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||||||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 220 tactggacaatgtggaagttgcctatgttcggatgcaccgactcggcccaagtgatgaag 279 Query: 390 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgac 449 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||||||| Sbjct: 280 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggattcgac 339 Query: 450 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 486 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 340 aacgttcgtcaagtgcaatgcgtcagtttcattgcct 376
>gb|AF044399.1|AF044399 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1B (rbcS-P1B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 629 Score = 91.7 bits (46), Expect = 2e-15 Identities = 129/157 (82%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||||||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 220 tactggacaatgtggaagttgcctatgttcggatgcaccgactcggcccaagtgatgaag 279 Query: 390 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgac 449 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||||||| Sbjct: 280 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggattcgac 339 Query: 450 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 486 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 340 aacgttcgtcaagtgcaatgcgtcagtttcattgcct 376
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 89.7 bits (45), Expect = 8e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 |||||||| ||||| |||||||| |||||||||||||| |||||||| |||||||||||| Sbjct: 632 tactacgacggccgctactggaccatgtggaagctgcccatgttcggctgcaccgacgcc 691 Query: 375 acacaggtg 383 || |||||| Sbjct: 692 acgcaggtg 700 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 99 agcctcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||||||| |||||||||||| ||||||||| ||||||||||||| Sbjct: 298 agcctcggcaacgtcagcaacggcggaaggatccggtgcatgcaggt 344 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 464 gcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||||||||| |||||| Sbjct: 781 gcagtgcgtcagcttcatcgcctacaagcc 810
>gb|AF039012.1|AF039012 Fritillaria agrestis clone TA27 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcggtactggacaatgttgaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 6.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccct 181 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039010.1|AF039010 Fritillaria agrestis clone TA24 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcgctactggacaatgtggaagctgcccatgttcgg 539 Score = 40.1 bits (20), Expect = 6.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccct 181 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF031543.1|AF031543 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type IV (rbcS4) mRNA, complete cds Length = 732 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 358 atctcctgggtactacgatgggcgctactggacaatgtggaagctgccgatgttcgg 414 Score = 40.1 bits (20), Expect = 6.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 181 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 187 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 234
>gb|AF024572.1|AF024572 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type I (rbcS1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 713 Score = 89.7 bits (45), Expect = 8e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 357 atctcctgggtactacgatgggcgctactggacaatgtggaagctgccgatgttcgg 413 Score = 40.1 bits (20), Expect = 6.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 181 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 186 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 233
>ref|NM_202369.1| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090 transcript variant AT1G67090.2 mRNA, complete cds Length = 871 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 367 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 426 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 427 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 486 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 487 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 546 Query: 495 cca 497 ||| Sbjct: 547 cca 549
>ref|NM_105379.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090 transcript variant AT1G67090.1 mRNA, complete cds Length = 878 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 374 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 433 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 434 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 493 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 494 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 553 Query: 495 cca 497 ||| Sbjct: 554 cca 556
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Minus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 78365 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 78306 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 78305 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 78246 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 78245 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 78186 Query: 495 cca 497 ||| Sbjct: 78185 cca 78183
>gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence Length = 2116 Score = 87.7 bits (44), Expect = 3e-14 Identities = 145/179 (81%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 1751 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgactcc 1810 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | |||||| | || || || || || ||||||||||||||| | ||| | | | Sbjct: 1811 gctcaggtgttgaaggaagttgaagaatgcaagaaggagtacccgggcgccttcattagg 1870 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 1871 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 1929
>gb|BT000362.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 465 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 495 cca 497 ||| Sbjct: 526 cca 528
>gb|AY097366.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds Length = 543 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 465 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 495 cca 497 ||| Sbjct: 526 cca 528
>gb|AY093380.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds Length = 583 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 465 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 495 cca 497 ||| Sbjct: 526 cca 528
>gb|AY065101.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds Length = 617 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 368 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 427 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 428 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 487 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 488 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 547 Query: 495 cca 497 ||| Sbjct: 548 cca 550
>gb|AY062711.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090; F5A8.1) mRNA, complete cds Length = 772 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 372 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 431 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 432 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 491 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 492 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 551 Query: 495 cca 497 ||| Sbjct: 552 cca 554
>gb|AY062612.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (F5A8.1) mRNA, complete cds Length = 750 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 372 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 431 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 432 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 491 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 492 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 551 Query: 495 cca 497 ||| Sbjct: 552 cca 554
>gb|AY059940.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090; F5A8.1) mRNA, complete cds Length = 721 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 375 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 434 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 435 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 494 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 495 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 554 Query: 495 cca 497 ||| Sbjct: 555 cca 557
>gb|AY058831.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds Length = 788 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 372 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 431 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 432 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 491 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 492 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 551 Query: 495 cca 497 ||| Sbjct: 552 cca 554
>gb|AY054188.1| Arabidopsis thaliana At1g67090/F1O19.10 mRNA, complete cds Length = 711 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 374 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 433 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 434 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 493 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 494 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 553 Query: 495 cca 497 ||| Sbjct: 554 cca 556
>gb|AY054581.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090; F5A8.1) mRNA, complete cds Length = 702 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 375 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 434 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 435 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 494 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 495 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 554 Query: 495 cca 497 ||| Sbjct: 555 cca 557
>gb|AF410291.1|AF410291 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 752 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 373 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 432 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 433 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 492 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 493 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 552 Query: 495 cca 497 ||| Sbjct: 553 cca 555
>gb|AY050459.1| Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds Length = 3162 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 374 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 433 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 434 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 493 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 494 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 553 Query: 495 cca 497 ||| Sbjct: 554 cca 556
>gb|AC004146.1|AC004146 Arabidopsis thaliana chromosome I BAC F5A8, complete sequence Length = 101933 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Minus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 2254 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 2195 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 2194 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 2135 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 2134 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 2075 Query: 495 cca 497 ||| Sbjct: 2074 cca 2072
>gb|AF325004.2|AF325004 Arabidopsis thaliana At1g67090 (At1g67090/F1O19.10) mRNA, complete cds Length = 754 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 373 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 432 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 433 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 492 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 493 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 552 Query: 495 cca 497 ||| Sbjct: 553 cca 555
>gb|AF372874.1|AF372874 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 632 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 197 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 256 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 257 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 316 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 317 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 376 Query: 495 cca 497 ||| Sbjct: 377 cca 379
>emb|BX814212.1|CNS0ADS1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZA04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 352 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 411 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 412 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 471 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 472 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 531 Query: 495 cca 497 ||| Sbjct: 532 cca 534
>emb|BX818334.1|CNS0ACND Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL73ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 735 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 352 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 411 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 412 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 471 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 472 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 531 Query: 495 cca 497 ||| Sbjct: 532 cca 534
>emb|BX818366.1|CNS0ACKZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL75ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 697 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 314 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 373 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 374 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 433 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 434 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 493 Query: 495 cca 497 ||| Sbjct: 494 cca 496
>emb|BX817617.1|CNS0ACFY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL32ZH02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 730 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 347 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 406 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 407 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 466 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 467 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 526 Query: 495 cca 497 ||| Sbjct: 527 cca 529
>gb|AF325011.1|AF325011 Arabidopsis thaliana 000C10C11 mRNA, complete cds Length = 825 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 373 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 432 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 433 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 492 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 493 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 552 Query: 495 cca 497 ||| Sbjct: 553 cca 555
>emb|X13711.1|NPRBCS8B Nicotiana plumbaginifolia rbcS-8B gene for ribulose bisphosphate carboxylase small subunit Length = 2293 Score = 87.7 bits (44), Expect = 3e-14 Identities = 136/167 (81%) Strand = Plus / Plus Query: 328 ggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctca 387 |||||||||| ||||||||||| ||||||||||||||||| || ||||| || ||| | Sbjct: 1814 ggtactggaccatgtggaagctacctatgttcggatgcactgatgccacccaagtgttgg 1873 Query: 388 acgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcg 447 |||||||| |||| ||||||| ||||| | || | ||||| || || ||||||| Sbjct: 1874 ctgaggtggaagaggcgaagaaggcatacccacaggcctgggtccgtattattggattcg 1933 Query: 448 acaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||| ||||||| ||||||||| |||| ||||| |||| ||||||| Sbjct: 1934 acaacgtgcgtcaagtgcagtgcatcagtttcattgcctacaagcca 1980
>gb|BT002076.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 87.7 bits (44), Expect = 3e-14 Identities = 148/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 465 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 495 cca 497 ||| Sbjct: 526 cca 528
>emb|X14564.1|ATATSGS A.thaliana ats1B, ats2B and ats3B gene for ribulose-1,5-biphosphate carboxylase small subunit (rbcS) (EC 4.1.1.39) Length = 9647 Score = 87.7 bits (44), Expect = 3e-14 Identities = 145/179 (81%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| || Sbjct: 9047 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgactcc 9106 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || ||||| || || ||||||||||||||| | ||| | | | Sbjct: 9107 gctcaagtgttgaaggaggttgaagaatgcaagaaggagtacccgggcgccttcattagg 9166 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 9167 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 9225 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 2200 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 2256 Score = 71.9 bits (36), Expect = 2e-09 Identities = 143/179 (79%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 5348 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 5407 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 5408 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 5467 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 5468 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 5526 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||||| ||||| || |||||| |||| ||||| |||| |||||| Sbjct: 2320 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcc 2378
>gb|M36685.1|TOBRBCS8B N.plumbaginifolia ribulose bisphosphate carboxylase (rbcS-8B) gene, complete cds Length = 2293 Score = 87.7 bits (44), Expect = 3e-14 Identities = 136/167 (81%) Strand = Plus / Plus Query: 328 ggtactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctca 387 |||||||||| ||||||||||| ||||||||||||||||| || ||||| || ||| | Sbjct: 1814 ggtactggaccatgtggaagctacctatgttcggatgcactgatgccacccaagtgttgg 1873 Query: 388 acgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcg 447 |||||||| |||| ||||||| ||||| | || | ||||| || || ||||||| Sbjct: 1874 ctgaggtggaagaggcgaagaaggcatacccacaggcctgggtccgtattattggattcg 1933 Query: 448 acaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||| ||||||| ||||||||| |||| ||||| |||| ||||||| Sbjct: 1934 acaacgtgcgtcaagtgcagtgcatcagtttcattgcctacaagcca 1980
>gb|M38318.1|CIPRBCS4 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-4) mRNA, complete cds Length = 747 Score = 87.7 bits (44), Expect = 3e-14 Identities = 145/179 (81%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 373 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 432 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | ||||| | ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 433 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 492 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||| |||||||||||| ||||||| || ||||| ||||| |||||||||| |||||| Sbjct: 493 atcataggattcgacaacgtgcgtcaagtccagtgtgtcagtttcatcgcctacaagcc 551
>gb|L10215.1|CIP345RSS Mesembryanthemum crystallinum (clones: rbcs-3 and -4) rubisco small subunit genes, complete cds, (clone: rbcs-5) rubisco small submnit gene, partial cds Length = 8682 Score = 87.7 bits (44), Expect = 3e-14 Identities = 145/179 (81%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 7511 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 7570 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | ||||| | ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 7571 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 7630 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||| |||||||||||| ||||||| || ||||| ||||| |||||||||| |||||| Sbjct: 7631 atcataggattcgacaacgtgcgtcaagtccagtgtgtcagtttcatcgcctacaagcc 7689 Score = 87.7 bits (44), Expect = 3e-14 Identities = 145/179 (81%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 3529 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 3588 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | ||||| | ||| | ||||||| |||||||| |||||||| || | |||| Sbjct: 3589 tcccaggttgttgctgagctcgaggaggccaagaaggcttaccctgaggccttcatccgt 3648 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||| |||||||||||| ||||||| || ||||| ||||| |||||||||| |||||| Sbjct: 3649 atcataggattcgacaacgtgcgtcaagtccagtgtgtcagtttcatcgcctacaagcc 3707 Score = 73.8 bits (37), Expect = 5e-10 Identities = 132/164 (80%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||||||||||||| |||| |||||||| ||||| ||| | | ||||| | Sbjct: 1178 tactggacaatgtggaagttgcccatgttcggttgcactgacccatcccaggttgttgct 1237 Query: 390 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgac 449 ||| | ||||||| |||||||| |||||||| || | |||| ||||||||||||||| Sbjct: 1238 gagctcgaggaggccaagaaggcttaccctgaggccttcatccgtatcatcggattcgac 1297 Query: 450 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||| ||||||| || ||||| |||| |||||||||| |||||| Sbjct: 1298 aacgtgcgtcaagtccagtgtatcagtttcatcgcctacaagcc 1341 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 aagaagttcgagaccctgtcttac 188 |||||||||||||| ||||||||| Sbjct: 895 aagaagttcgagactctgtcttac 918
>gb|L10214.1|CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2) rubisco small subunit gene, complete cds Length = 2671 Score = 87.7 bits (44), Expect = 3e-14 Identities = 145/179 (81%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| || |||||||||||||||||| |||| |||||||| ||||| ||| | Sbjct: 1862 tactatgatggacgttactggacaatgtggaagttgcccatgttcggttgcactgaccca 1921 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | |||||| | ||| | ||||||| |||||||| |||||||| || | ||| Sbjct: 1922 tcccaggtggttgctgagctcgaggaggccaagaaggcttaccctgaggccttcacccgt 1981 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 |||||||||||||||||| ||||||| || |||||| |||| |||||||||| |||||| Sbjct: 1982 atcatcggattcgacaacgtgcgtcaagtacagtgcatcagtttcatcgcctacaagcc 2040 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 aagaagttcgagaccctgtcttac 188 |||||||||||||| ||||||||| Sbjct: 1499 aagaagttcgagactctgtcttac 1522
>emb|X03821.1|PERBCS11 Petunia x hybrida rbcS gene (ssu11A) for ribulose 1,5-bisphosphate carboxylase small subunit Length = 1314 Score = 85.7 bits (43), Expect = 1e-13 Identities = 76/87 (87%) Strand = Plus / Plus Query: 290 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 349 ||||||| || | |||||||| ||||||| |||||| |||||||||| ||||||||||| Sbjct: 972 ccgtgagtaccatgcatctccaaggtactatgatggcaggtactggaccatgtggaagct 1031 Query: 350 gcctatgttcggatgcaccgacgccac 376 ||| |||||||| |||||||| ||||| Sbjct: 1032 gcccatgttcgggtgcaccgatgccac 1058 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||| |||||||||||| ||||||| ||||| ||| |||| ||||| |||| |||||| Sbjct: 1117 atcattggattcgacaacgtgcgtcaagtgcaatgcatcagtttcattgcctacaagcc 1175
>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 2328 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgc 373 |||||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||| Sbjct: 1582 tactacgacggccggtactggaccatgtggaagctgcccatgttcggctgcaccgacgc 1640 Score = 69.9 bits (35), Expect = 8e-09 Identities = 117/141 (82%), Gaps = 5/141 (3%) Strand = Plus / Plus Query: 7 caccgtgatggcctcatcggcc-cctccgtcgctcc-tttcaggggctcaagtccaccgc 64 ||||||||||||||| || ||| || ||| ||||| || |||||||||||||||||||| Sbjct: 1180 caccgtgatggcctcgtccgccaccgccgctgctccgttccaggggctcaagtccaccgc 1239 Query: 65 cggccttcccgtcagccgccgctccaacggcgctagcctcggcagcgtcagcaacggtgg 124 | |||| |||||| ||| ||||||| | | ||||||| || ||||||||||| || Sbjct: 1240 cagcctccccgtcgcccgacgctcca---ccaccagcctcgccaaagtcagcaacggcgg 1296 Query: 125 aaggatcaggtgcatgcaggt 145 ||||||| ||||||||||||| Sbjct: 1297 aaggatccggtgcatgcaggt 1317 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Plus Query: 219 aagcaggtcgactacctgatccgctccaagtgggtgccttgcctcgagttcagcaagg 276 |||||||| ||||||||| | ||| ||| |||||||| ||||||||||||||||||| Sbjct: 1486 aagcaggtggactacctgctgcgcaacaactgggtgccctgcctcgagttcagcaagg 1543
>gb|AY843526.1| Ammopiptanthus mongolicus ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 824 Score = 83.8 bits (42), Expect = 5e-13 Identities = 152/189 (80%) Strand = Plus / Plus Query: 309 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 368 ||||| ||||| ||||| || |||||||| |||||||||||||||||||| || |||| Sbjct: 372 cctggatactatgatggacgctactggaccatgtggaagctgcctatgtttgggtgcagt 431 Query: 369 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 428 || || |||||||| | || ||| | |||||| ||||||||| ||||| || | Sbjct: 432 gatgcttcacaggtgatgaaggagcttgaggagtgcaagaaggaataccccactgctttc 491 Query: 429 gtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 488 ||||| ||||| ||||||||||||| ||||| || |||||| |||| ||||| |||| | Sbjct: 492 gtccgaatcattggattcgacaacaaacgtcaagttcagtgcatcagtttcattgcctac 551 Query: 489 aagccacca 497 ||||||||| Sbjct: 552 aagccacca 560 Score = 40.1 bits (20), Expect = 6.7 Identities = 32/36 (88%) Strand = Plus / Plus Query: 165 aagaagttcgagaccctgtcttacttgccaccactc 200 |||||||||||||| || || ||| ||||||||||| Sbjct: 225 aagaagttcgagactctttcctacctgccaccactc 260
>gb|AY267351.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS2) mRNA, complete cds Length = 787 Score = 83.8 bits (42), Expect = 5e-13 Identities = 128/157 (81%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||||||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 399 tactggacaatgtggaagttgcctatgttcggatgcaccgactcagcccaagtgatgaag 458 Query: 390 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgac 449 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||| ||| Sbjct: 459 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggatttgac 518 Query: 450 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 486 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 519 aacgtccgtcaagtgcaatgcgtcagtttcattgcct 555
>emb|X02353.1|NTRUBSS Tobacco gene for ribulose 1,5-bisphosphate carboxylase small subunit Length = 2362 Score = 83.8 bits (42), Expect = 5e-13 Identities = 134/165 (81%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||| ||||||||||||||||| || ||||| || ||| | Sbjct: 1808 tactggaccatgtggaagctacctatgttcggatgcactgatgccacccaagtgttggct 1867 Query: 390 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgac 449 |||||||| |||| ||||||| ||||| | || | |||| ||||| ||||||||| Sbjct: 1868 gaggtggaagaggcgaagaaggcatacccacaggcctggatccgtatcattggattcgac 1927 Query: 450 aacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||| ||||||| ||||||||| |||| ||||| |||| ||||||| Sbjct: 1928 aacgtgcgtcaagtgcagtgcatcagtttcattgcctacaagcca 1972
>gb|AF044401.1|AF044401 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2B (rbcS-P2B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 532 Score = 83.8 bits (42), Expect = 5e-13 Identities = 128/157 (81%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 220 tactggacgatgtggaagttgcctatgttcggatgcaccgactcggcccaagtgatgaag 279 Query: 390 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgac 449 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||||||| Sbjct: 280 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggattcgac 339 Query: 450 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 486 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 340 aacgttcgtcaagtgcaatgcgtcagtttcattgcct 376
>gb|AF039007.1|AF039007 Fritillaria agrestis clone TA10 rbcS pseudogene, partial sequence Length = 584 Score = 83.8 bits (42), Expect = 5e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 472 atctcctgggtactacgatgggcgctactggacaatgtggaagctgcccatgtt 525 Score = 40.1 bits (20), Expect = 6.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccct 181 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 233 aggtctggcccatcgtggggttgaagaagttcgagaccct 272
>gb|AF039006.1|AF039006 Fritillaria agrestis clone TA17 rbcS pseudogene, partial sequence Length = 584 Score = 83.8 bits (42), Expect = 5e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 472 atctcctgggtactacgatgggcgctactggacaatgtggaagctgcccatgtt 525 Score = 40.1 bits (20), Expect = 6.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccct 181 |||| |||||||||| ||| | ||||||||||||||||| Sbjct: 233 aggtctggcccatcgtggggttgaagaagttcgagaccct 272
>gb|AF039005.1|AF039005 Fritillaria agrestis clone TA13 rbcS pseudogene, partial sequence Length = 584 Score = 83.8 bits (42), Expect = 5e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgtt 358 ||||||||||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 472 atctcctgggtactacgatgggcgctactggacaatgtggaagctgcccatgtt 525
>gb|M29642.1|PETRBCB Petunia ribulose 1,5-bisphosphate carboxylase small subunit mRNA (clone pSSU 51), partial cds Length = 212 Score = 83.8 bits (42), Expect = 5e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 303 gcatctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgga 362 |||||||| |||||||| |||||| |||||||||| |||||||||||||| |||||||| Sbjct: 4 gcatctccagggtactatgatggcaggtactggaccatgtggaagctgcccatgttcggg 63 Query: 363 tgcaccgacgccac 376 ||||| || ||||| Sbjct: 64 tgcactgatgccac 77
>ref|NM_123204.3| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38430 mRNA, complete cds Length = 808 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 375 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 431
>ref|NM_123202.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410 transcript variant AT5G38410.1 mRNA, complete cds Length = 925 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 453
>ref|NM_001036904.1| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410 transcript variant AT5G38410.2 mRNA, complete cds Length = 963 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 435 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 491
>gb|AY143814.1| Arabidopsis thaliana At5g38430/F1O19.10 mRNA, complete cds Length = 546 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 402
>gb|BT000721.1| Arabidopsis thaliana clone RAFL04-15-J15 (R09791) putative ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410) mRNA, complete cds Length = 772 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 398 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 454
>gb|AY051025.1| Arabidopsis thaliana putative RuBisCO small 3b subunit precursor (At5g38410) mRNA, complete cds Length = 577 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 402
>gb|AF360124.1| Arabidopsis thaliana putative ribulose bisphosphate carboxylase small chain 3b precursor (At5g38410) mRNA, complete cds Length = 720 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 453
>gb|AY098970.1| Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds Length = 546 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 402
>gb|AF462822.1|AF462822 Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds Length = 764 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 453
>gb|AY065026.1| Arabidopsis thaliana AT5g53140/MFH8_8 mRNA, complete cds Length = 2204 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 21 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 77
>gb|AY064686.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410; MXI10.13) mRNA, complete cds Length = 595 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 346 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 402
>gb|AY054552.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410; MXI10.13) mRNA, complete cds Length = 772 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 389 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 445
>gb|AF410314.1|AF410314 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 728 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 397 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 453
>gb|AF410283.1|AF410283 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 652 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 372 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 428
>emb|BX833384.1|CNS0A1LA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL51ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 703 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 373 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 429
>emb|BX830381.1|CNS0A1HW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 717 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 355 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 411
>emb|BX830099.1|CNS0A1FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 372 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 79 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 135
>emb|BX832776.1|CNS0A0L8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL10ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 715 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 385 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 441
>emb|BX831203.1|CNS0A0SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 706 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 374 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 430
>emb|BX833789.1|CNS0A0DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL77ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 368 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 424
>emb|BX833660.1|CNS0A0FN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL69ZD11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 716 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 384 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 440
>emb|BX832874.1|CNS0A0CD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZB09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 709 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 379 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 435
>gb|BT005730.1| Arabidopsis thaliana clone RAFL15-16-B15 (R20676) Length = 1794 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 392 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 448
>dbj|AB005248.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXI10 Length = 83646 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 57682 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 57626 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Minus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||| Sbjct: 50833 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcaccgac 50777 Score = 71.9 bits (36), Expect = 2e-09 Identities = 143/179 (79%) Strand = Plus / Minus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 54535 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 54476 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 54475 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 54416 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 54415 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 54357
>gb|AF039014.1|AF039014 Fritillaria agrestis clone TA8 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 480 atctcctggttactacgatgggcgatactggacaatgtggaagctgcccatgttcgg 536 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccct 181 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtgtggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039011.1|AF039011 Fritillaria agrestis clone TA22 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 591 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 479 atctcctggttactacgatgggcgatactggacaatgtggaagctgcccatgttcgg 535 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccct 181 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 243 aggtgtggcccatcgtggggttgaagaagttcgagaccct 282
>gb|AF039008.1|AF039008 Fritillaria agrestis clone TA15 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||| ||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 480 atctcctggttactacgatgggcgatactggacaatgtggaagctgcccatgttcgg 536 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccct 181 ||||||||||||||| ||| | ||||||||||||||||| Sbjct: 244 aggtgtggcccatcgtggggttgaagaagttcgagaccct 283
>gb|AF039004.1|AF039004 Fritillaria agrestis clone TA9 rbcS pseudogene, partial sequence Length = 594 Score = 81.8 bits (41), Expect = 2e-12 Identities = 54/57 (94%), Gaps = 1/57 (1%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| Sbjct: 483 atctcctgggtactacgatgggcggtactggacaatgt-gaagctgcccatgttcgg 538 Score = 42.1 bits (21), Expect = 1.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttactt 190 |||| |||||||||| ||| | ||||||||||||||||| || ||||| Sbjct: 244 aggtctggcccatcgtggggttgaagaagttcgagaccctctcctactt 292
>gb|AF031544.1|AF031544 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type V (rbcS5) mRNA, complete cds Length = 728 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 305 atctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 ||||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 385 atctcctgggtactacgatgggcgctactggacgatgtggaagctgcccatgttcgg 441 Score = 40.1 bits (20), Expect = 6.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 181 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 214 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 261
>emb|X13611.1|ATRBCSA Arabidopsis thaliana ats1A gene for ribulose 1.5-biphoshate carboxylase small subunit (EC 4.1.1.39) Length = 2821 Score = 79.8 bits (40), Expect = 8e-12 Identities = 147/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 2319 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 2378 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 2379 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattagg 2438 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| ||| | |||| ||||||| Sbjct: 2439 atcatcggattcgacaacacccgtcaagtccagtgcatcagtttcgttgcctacaagcca 2498 Query: 495 cca 497 ||| Sbjct: 2499 cca 2501
>gb|AY093388.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 79.8 bits (40), Expect = 8e-12 Identities = 147/183 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| ||||||||||||||||||||||| || ||||||| ||||||||| || Sbjct: 346 tactatgatggacggtactggacaatgtggaagcttcccttgttcggttgcaccgactcc 405 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || ||||| ||| ||||||||||||||| | || | | | Sbjct: 406 gctcaagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattaga 465 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 || |||||||||||||||| ||||| || |||||| |||| ||||| |||| ||||||| Sbjct: 466 ataatcggattcgacaacacccgtcaagtccagtgcatcagtttcattgcctacaagcca 525 Query: 495 cca 497 ||| Sbjct: 526 cca 528
>gb|AF312228.1|AF312228 Citrus reticulata ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit precursor, gene, partial cds, nuclear gene for chloroplast product Length = 353 Score = 79.8 bits (40), Expect = 8e-12 Identities = 135/167 (80%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||||||||| || ||||||||||||||||||||||| |||| || ||||| || || Sbjct: 184 tactacgatggacgctactggacaatgtggaagctgcccatgtatgggtgcacagatgca 243 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 || ||||| | || ||||| | ||||||| ||||||| ||||| | | | ||||| Sbjct: 244 acccaggttttgaaggaggttggggaggtccagaaggaatacccacattcattcgtccga 303 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcat 481 || |||||||| ||||||| |||||| ||||||||| |||| ||||| Sbjct: 304 attatcggatttgacaacaagcgtcaagtgcagtgcatcagtttcat 350
>gb|AF024573.1|AF024573 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type II (rbcS2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 784 Score = 79.8 bits (40), Expect = 8e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 306 tctcctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcgg 361 |||||||||||||||||||| || |||||||| |||||||||||||| |||||||| Sbjct: 362 tctcctgggtactacgatgggcgctactggacgatgtggaagctgcccatgttcgg 417 Score = 40.1 bits (20), Expect = 6.7 Identities = 41/48 (85%) Strand = Plus / Plus Query: 134 gtgcatgcaggtgtggcccatcgagggcatcaagaagttcgagaccct 181 ||||||| | || |||||||||| ||| | ||||||||||||||||| Sbjct: 190 gtgcatgaaagtctggcccatcgtggggttgaagaagttcgagaccct 237
>emb|AJ786660.1| Limonium gibertii partial mRNA for ribulose 1,5 bisphosphate carboxylase/oxygenase small subunit (rbcS1 gene) Length = 459 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 439 tcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagccacca 497 ||||||||||||||| |||||| ||||||||| |||| |||||||||| |||||||||| Sbjct: 401 tcggattcgacaacaagcgtcaagtgcagtgcatcagtttcatcgcctacaagccacca 459 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcac 367 |||||||||||||||||||| || |||| ||||||||| Sbjct: 292 tactggacaatgtggaagcttcccatgtacggatgcac 329
>gb|DQ336280.1| Vitis pseudoreticulata ribulose-1,5-bisphophate carboxylase/oxygenase small subunit mRNA, complete cds Length = 543 Score = 77.8 bits (39), Expect = 3e-11 Identities = 128/158 (81%) Strand = Plus / Plus Query: 294 gagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagctgcct 353 ||||||||| |||||| || |||||||| || |||||||||| |||||||||||||| Sbjct: 337 gagcacaacagatctccaggatactacgacggaaggtactggaccatgtggaagctgccc 396 Query: 354 atgttcggatgcaccgacgccacacaggtgctcaacgaggtggaggaggtcaagaaggag 413 |||||||| ||||| ||| | | |||||| | || |||||| | || | || || |||| Sbjct: 397 atgttcgggtgcactgactcagcccaggtgattaaggaggtgcaagaagccaggacggag 456 Query: 414 taccctgacgcgtatgtccgnatcatcggattcgacaa 451 |||||| |||| | |||| ||||||||||||||||| Sbjct: 457 taccctaacgcccacatccgaatcatcggattcgacaa 494
>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase small subunit mRNA, clone pTS406, 3' end Length = 317 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 458 tcaggtgcagtgcgtcagcttcatcgccttcaagccacc 496 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tcaggtgcagtgcgtcagcttcatcgccttcaagccacc 39
>emb|X55937.1|BNRBCSF1 Brassica napus rbcSF1 gene for ribulose-1,5-biphosphate carboxylase/oxygenase small subunit Length = 2006 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| |||||||| |||||| |||| |||||||||| ||||||| Sbjct: 1454 atcatcggattcgacaacaaccgtcaggtccagtgcatcagtttcatcgcctacaagcca 1513 Query: 495 cca 497 ||| Sbjct: 1514 cca 1516 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 367 |||||||||||||| |||||||||||||||||||| || ||||||||||||| Sbjct: 1334 tactacgatggccgttactggacaatgtggaagcttcccttgttcggatgcac 1386
>emb|X01722.1|NSRUB1 Nicotiana silvestris mRNA for the small subunit of ribulose bisphosphate carboxylase Length = 796 Score = 75.8 bits (38), Expect = 1e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 430 tccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 489 |||| ||||| |||||||||||| ||||||| ||||||||| |||| |||||||||| || Sbjct: 527 tccgtatcattggattcgacaacgtgcgtcaagtgcagtgcatcagtttcatcgcctaca 586 Query: 490 agcca 494 ||||| Sbjct: 587 agcca 591 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| |||||| | |||||||| ||||||||||| ||||||||||||||||| || ||| Sbjct: 412 tactatgatggcagatactggaccatgtggaagctacctatgttcggatgcactgatgcc 471 Query: 375 ac 376 || Sbjct: 472 ac 473
>emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene) Length = 761 Score = 75.8 bits (38), Expect = 1e-10 Identities = 151/189 (79%) Strand = Plus / Plus Query: 309 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 368 ||||| ||||| || || || |||||||||||||||||||| || ||||||||||||||| Sbjct: 373 cctggatactatgacggacgctactggacaatgtggaagctacccatgttcggatgcacc 432 Query: 369 gacgccacacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtat 428 || |||| || || | ||| |||||||| ||||||||| ||||| |||| | Sbjct: 433 gatgccagccaagtcattgctgagctggaggagtgcaagaaggaataccccaacgcctgg 492 Query: 429 gtccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttc 488 ||| | |||||||| ||||||||| | || || || |||||| |||| ||||| |||| | Sbjct: 493 gtcaggatcatcggcttcgacaacgttcgccaagtccagtgcatcagtttcattgcctcc 552 Query: 489 aagccacca 497 ||||||||| Sbjct: 553 aagccacca 561 Score = 48.1 bits (24), Expect = 0.028 Identities = 39/44 (88%) Strand = Plus / Plus Query: 226 tcgactacctgatccgctccaagtgggtgccttgcctcgagttc 269 |||||||||| |||||||||||||| | |||||||| |||||| Sbjct: 287 tcgactaccttctccgctccaagtggattccttgccttgagttc 330
>gb|AY273795.1| Citrus limon ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, partial cds; nuclear gene for chloroplast product Length = 357 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||||||||| || ||||||||||||||||||||||| ||||| || ||||| || || Sbjct: 199 tactacgatggacgctactggacaatgtggaagctgcccatgtttgggtgcacagatgca 258 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaagga 412 |||||||| | || ||||| | ||||||| ||||||| Sbjct: 259 acacaggttttgaaggaggttggggaggtccagaagga 296
>gb|AF044398.1|AF044398 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1A (rbcS-P1A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 608 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgac 371 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 220 tactggacaatgtggaagttgcctatgttcggatgcaccgac 261 Score = 61.9 bits (31), Expect = 2e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 404 caagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggt 463 |||||||||||||||| | || | |||| |||||||||||||||||| | ||||| || Sbjct: 294 caagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgttcgtcaagt 353 Query: 464 gcagtgcgtcagcttcat 481 ||| |||||||| ||||| Sbjct: 354 gcaatgcgtcagtttcat 371
>gb|AF044396.1|AF044396 Flaveria ramosissima ribulose-1,5-bisphosphate carboxylase small subunit R2 (rbcS-R2) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 574 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgac 371 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 220 tactggacaatgtggaagttgcctatgttcggatgcaccgac 261 Score = 48.1 bits (24), Expect = 0.028 Identities = 68/83 (81%) Strand = Plus / Plus Query: 404 caagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggt 463 |||||||||||||||| | || | |||| ||||||||||| |||||| | ||||| || Sbjct: 294 caagaaggagtaccctcaggcatggatccgtatcatcggatttgacaacgtccgtcaagt 353 Query: 464 gcagtgcgtcagcttcatcgcct 486 ||| ||| |||| ||||| |||| Sbjct: 354 gcaatgcatcagtttcattgcct 376
>emb|BX833317.1|CNS0A0CV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZC08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 733 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcacc 368 ||||||||||| ||||||||||||||||||||||| || |||||||||||||| Sbjct: 384 tactacgatggacggtactggacaatgtggaagcttccattgttcggatgcacc 437
>emb|X05037.1|FTRBCR Flaveria trinervia mRNA for ribulose 1,5-biphosphate carboxylase Length = 752 Score = 75.8 bits (38), Expect = 1e-10 Identities = 127/157 (80%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||| ||||||||||||||||||||||| | | || ||| | || Sbjct: 371 tactggacgatgtggaagttgcctatgttcggatgcaccgactcagcccaagtgatgaag 430 Query: 390 gaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgnatcatcggattcgac 449 ||| | | ||| |||||||||||||||| | || | |||| ||||||||||| ||| Sbjct: 431 gagcttcaagagtgcaagaaggagtaccctcaggcatggatccgtatcatcggatttgac 490 Query: 450 aacatgcgtcaggtgcagtgcgtcagcttcatcgcct 486 ||| | ||||| ||||| |||||||| ||||| |||| Sbjct: 491 aacgtccgtcaagtgcaatgcgtcagtttcattgcct 527
>gb|U29939.1|FPU29939 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS7) mRNA, complete cds Length = 743 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgac 371 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 379 tactggacaatgtggaagttgcctatgttcggatgcaccgac 420
>gb|U29938.1|FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS6) mRNA, complete cds Length = 724 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgac 371 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 364 tactggacaatgtggaagttgcctatgttcggatgcaccgac 405 Score = 54.0 bits (27), Expect = 4e-04 Identities = 65/78 (83%) Strand = Plus / Plus Query: 404 caagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggt 463 |||||||||||||||| | || | |||| |||||||||||||||||| | ||||| || Sbjct: 438 caagaaggagtaccctcaggcatggatccgtatcatcggattcgacaacgtccgtcaagt 497 Query: 464 gcagtgcgtcagcttcat 481 ||| ||| |||| ||||| Sbjct: 498 gcaatgcatcagtttcat 515
>gb|U29937.1|FPU29937 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS5) mRNA, complete cds Length = 731 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgac 371 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 367 tactggacaatgtggaagttgcctatgttcggatgcaccgac 408
>gb|U29936.1|FPU29936 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS4) mRNA, complete cds Length = 753 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgac 371 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 396 tactggacaatgtggaagttgcctatgttcggatgcaccgac 437
>gb|U29935.1|FPU29935 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS3) mRNA, complete cds Length = 746 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgac 371 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 381 tactggacaatgtggaagttgcctatgttcggatgcaccgac 422
>gb|U29934.1|FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS2) mRNA, complete cds Length = 763 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgac 371 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 393 tactggacaatgtggaagttgcctatgttcggatgcaccgac 434 Score = 56.0 bits (28), Expect = 1e-04 Identities = 75/91 (82%) Strand = Plus / Plus Query: 404 caagaaggagtaccctgacgcgtatgtccgnatcatcggattcgacaacatgcgtcaggt 463 |||||||||||||||| | || | |||| ||||||||||| |||||| | ||||| || Sbjct: 467 caagaaggagtaccctcaggcatggatccgtatcatcggatttgacaacgttcgtcaagt 526 Query: 464 gcagtgcgtcagcttcatcgccttcaagcca 494 |||||| |||| |||||||| | ||||||| Sbjct: 527 tcagtgcatcagtttcatcgcttccaagcca 557
>gb|J01308.1|TOBRBPC Nicotiana sylvestris ribulose-1,5-bisphosphate carboxylase small subunit mRNA Length = 453 Score = 75.8 bits (38), Expect = 1e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 430 tccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 489 |||| ||||| |||||||||||| ||||||| ||||||||| |||| |||||||||| || Sbjct: 185 tccgtatcattggattcgacaacgtgcgtcaagtgcagtgcatcagtttcatcgcctaca 244 Query: 490 agcca 494 ||||| Sbjct: 245 agcca 249 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| |||||| | |||||||| ||||||||||| ||||||||||||||||| || ||| Sbjct: 70 tactatgatggcagatactggaccatgtggaagctacctatgttcggatgcactgatgcc 129 Query: 375 ac 376 || Sbjct: 130 ac 131
>emb|BX832995.1|CNS0A22F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL28ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 550 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||| ||| || ||||||||||||||||| Sbjct: 203 tactacgatggacggtactggacaatgtggaggcttccattgttcggatgcaccgac 259
>emb|BX830542.1|CNS0A26B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB8ZB01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 538 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| ||||||||||||||||||||||| || | ||||||||||||||| Sbjct: 172 tactacgatggacggtactggacaatgtggaagcttccatttttcggatgcaccgac 228
>dbj|AB004883.1| Marchantia paleacea var. diptera mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 931 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 |||||||||||||| |||||||| ||||||||| |||| |||||||| ||||||||| Sbjct: 407 tactacgatggccgatactggaccatgtggaagttgcccatgttcgggtgcaccgac 463
>gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 mRNA, complete cds Length = 772 Score = 73.8 bits (37), Expect = 5e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 430 tccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 489 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 554 Query: 490 agcc 493 |||| Sbjct: 555 agcc 558 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 290 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 349 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||||| Sbjct: 355 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 414 Query: 350 gcctatgttcggatgcac 367 ||||||||| || ||||| Sbjct: 415 gcctatgtttggttgcac 432
>gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 mRNA, complete cds Length = 830 Score = 73.8 bits (37), Expect = 5e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 430 tccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 489 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 554 Query: 490 agcc 493 |||| Sbjct: 555 agcc 558 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 290 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 349 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||||| Sbjct: 355 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 414 Query: 350 gcctatgttcggatgcac 367 ||||||||| || ||||| Sbjct: 415 gcctatgtttggttgcac 432
>gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS1 mRNA, complete cds Length = 750 Score = 73.8 bits (37), Expect = 5e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 430 tccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 489 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 495 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 554 Query: 490 agcc 493 |||| Sbjct: 555 agcc 558 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 290 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 349 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||||| Sbjct: 355 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 414 Query: 350 gcctatgttcggatgcac 367 ||||||||| || ||||| Sbjct: 415 gcctatgtttggttgcac 432
>gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 765 Score = 73.8 bits (37), Expect = 5e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 430 tccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 489 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 492 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 551 Query: 490 agcc 493 |||| Sbjct: 552 agcc 555 Score = 67.9 bits (34), Expect = 3e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 290 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 349 ||||||||||||| || || || ||||||||||| || |||||||| ||||||||||| Sbjct: 352 ccgtgagcacaacaggtcaccaggatactacgatggacgctactggaccatgtggaagct 411 Query: 350 gcctatgttcggatgcac 367 ||||||||| || ||||| Sbjct: 412 gcctatgtttggttgcac 429
>emb|AJ419827.1|CAR419827 Coffea arabica rbcs1 gene for rubisco small subunit Length = 2034 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 1774 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 1833 Query: 390 gaggt 394 ||||| Sbjct: 1834 gaggt 1838 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 1879 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 1938
>emb|X07367.1|BNRBCSSU B.napus mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit Length = 726 Score = 73.8 bits (37), Expect = 5e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 367 |||||||||||||| |||||||||||||||||||| || ||||||||||||| Sbjct: 377 tactacgatggccgttactggacaatgtggaagcttcccttgttcggatgcac 429 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 ||||||||||||||||||| ||||| || |||||| |||| |||||||||| ||||||| Sbjct: 497 atcatcggattcgacaacaaccgtcaagtccagtgcatcagtttcatcgcctacaagcca 556 Query: 495 cca 497 ||| Sbjct: 557 cca 559
>gb|DQ300277.1| Coffea arabica cultivar Rume Sudan plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 390 gaggt 394 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300276.1| Coffea arabica cultivar Colombia plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 390 gaggt 394 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300275.1| Coffea arabica cultivar SL-28 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 390 gaggt 394 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300274.1| Coffea arabica cultivar Kent plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 390 gaggt 394 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300273.1| Coffea arabica cultivar F-502 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 390 gaggt 394 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300272.1| Coffea arabica cultivar Tipica plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 390 gaggt 394 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300271.1| Coffea arabica cultivar Bourbon plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 390 gaggt 394 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300270.1| Coffea arabica cultivar Mundo novo plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 390 gaggt 394 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300269.1| Coffea arabica cultivar Ethiopia 167 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 390 gaggt 394 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300268.1| Coffea arabica cultivar Ethiopia 87 plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 390 gaggt 394 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300267.1| Coffea arabica cultivar Alghe plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 390 gaggt 394 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|DQ300266.1| Coffea arabica cultivar Dilla plastid ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbsc1) gene, exons 2, 3 and partial cds; nuclear gene for plastid product Length = 677 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 330 tactggacaatgtggaagctgcctatgttcggatgcaccgacgccacacaggtgctcaac 389 |||||||| ||||||||||||||||||| ||| ||||| ||||| || |||||||| ||| Sbjct: 417 tactggaccatgtggaagctgcctatgtacggctgcacggacgcaactcaggtgctgaac 476 Query: 390 gaggt 394 ||||| Sbjct: 477 gaggt 481 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcca 494 |||||||||||||||||| | ||||||||||||||| |||| ||||| ||| ||||||| Sbjct: 522 atcatcggattcgacaacgtccgtcaggtgcagtgcatcagtttcattgccgccaagcca 581
>gb|U39857.1|GTU39857 Glycine tomentella ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1069 Score = 73.8 bits (37), Expect = 5e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 430 tccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 489 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 992 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 1051 Query: 490 agcc 493 |||| Sbjct: 1052 agcc 1055 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 309 cctgggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 367 ||||| ||||| ||||| || |||||||| ||||||||||||||| |||| || ||||| Sbjct: 871 cctggatactatgatggacgctactggaccatgtggaagctgcctgtgtttggctgcac 929
>gb|U39856.1|GSU39856 Glycine soja ribulose 1,5-bisphosphate carboxylase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1089 Score = 73.8 bits (37), Expect = 5e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 430 tccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 489 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 1012 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 1071 Query: 490 agcc 493 |||| Sbjct: 1072 agcc 1075 Score = 60.0 bits (30), Expect = 7e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 290 ccgtgagcacaacgcatctcctgggtactacgatggccggtactggacaatgtggaagct 349 ||||||||||||| || || || ||||||||||| || | |||||| ||||||||||| Sbjct: 872 ccgtgagcacaacaggtcaccaggatactacgatggacgctgctggaccatgtggaagct 931 Query: 350 gcctatgttcggatgcac 367 ||||||||| || ||||| Sbjct: 932 gcctatgtttggttgcac 949
>gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxylase small subunit (SRS4) gene, complete cds Length = 2185 Score = 73.8 bits (37), Expect = 5e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 430 tccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 489 |||| |||||||||||||||||| | || || ||||||||| ||||||||||||||| || Sbjct: 1663 tccgtatcatcggattcgacaacgttcgccaagtgcagtgcatcagcttcatcgcctaca 1722 Query: 490 agcc 493 |||| Sbjct: 1723 agcc 1726 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 367 ||||||||||| || |||||||| |||||||||||||||||||| || ||||| Sbjct: 1548 tactacgatggacgctactggaccatgtggaagctgcctatgtttggttgcac 1600
>gb|L10213.1|CIP6RSS Mesembryanthemum crystallinum (clone: rbcs-6) rubisco small subunit gene, complete cds Length = 3024 Score = 73.8 bits (37), Expect = 5e-10 Identities = 57/64 (89%) Strand = Plus / Plus Query: 430 tccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttca 489 |||| |||||||||||||||||| ||||||| ||||| || ||||| |||||||||| || Sbjct: 2584 tccgtatcatcggattcgacaacgtgcgtcaagtgcaatgtgtcagtttcatcgcctaca 2643 Query: 490 agcc 493 |||| Sbjct: 2644 agcc 2647 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcac 367 ||||||||||| || |||||||||||||||||| |||| |||||||| ||||| Sbjct: 2469 tactacgatggacgttactggacaatgtggaagttgcccatgttcggttgcac 2521
>dbj|AB026685.1| Physcomitrella patens mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 818 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 ||||||||||| || |||||||| |||||||||||||| |||||||| ||||||||| Sbjct: 462 tactacgatgggcgctactggaccatgtggaagctgcccatgttcgggtgcaccgac 518
>ref|NM_123203.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38420 mRNA, complete cds Length = 837 Score = 71.9 bits (36), Expect = 2e-09 Identities = 143/179 (79%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 397 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 456 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 457 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 516 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 517 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 575
>gb|AY705444.1| Fagus sylvatica chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, complete cds; nuclear gene for chloroplast product Length = 562 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 312 gggtactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgac 371 |||||||| ||||| || |||||| |||||||||||||| ||||| ||||||||||| Sbjct: 356 gggtactatgatggacgttactgggtgatgtggaagctgcccatgtttggatgcaccgat 415 Query: 372 gccacacaggtg 383 |||||||||||| Sbjct: 416 gccacacaggtg 427 Score = 65.9 bits (33), Expect = 1e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 430 tccgnatcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcat 481 |||| ||||||||||||||||||| |||||| ||||||||| |||| ||||| Sbjct: 474 tccgaatcatcggattcgacaacaagcgtcaagtgcagtgcatcagtttcat 525
>gb|AY023648.1| Oryza sativa microsatellite MRG5973 containing (TTC)X13, closest to marker S10704, genomic sequence Length = 239 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 142 aggtgtggcccatcgagggcatcaagaagttcgagaccctgtcttacttgccaccactca 201 |||||||||| || |||||||||||||||||||||||||| || ||| ||||||| |||| Sbjct: 173 aggtgtggccgattgagggcatcaagaagttcgagaccctctcctacctgccaccgctca 232 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 103 tcggcagcgtcagcaacggtggaaggatcaggtgcatgcaggt 145 |||||| ||||||||| || || |||||||||||||||||||| Sbjct: 31 tcggcaacgtcagcaatggcggcaggatcaggtgcatgcaggt 73
>gb|BT012936.1| Lycopersicon esculentum clone 114099R, mRNA sequence Length = 1261 Score = 71.9 bits (36), Expect = 2e-09 Identities = 143/179 (79%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 |||||||||||| | |||||||| ||||||||| |||| |||||||| ||||| || || Sbjct: 938 tactacgatggcagatactggaccatgtggaagttgcccatgttcgggtgcactgatgca 997 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 || ||||| | |||||| |||||| ||||||| ||||| | || | ||||| Sbjct: 998 acccaggtcttggctgaggtgcaggaggcaaagaaggcttacccacaggcatgggtccgt 1057 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||| | ||||| ||||||||| |||| |||||||| | |||||| Sbjct: 1058 atcatcggattcgacaatgttcgtcaagtgcagtgcatcagtttcatcgcttacaagcc 1116 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 114 agcaacggtggaaggatcaggtgcatgcaggtgtggcc 151 |||||||||||||| |||| ||||||||||||||||| Sbjct: 734 agcaacggtggaagagtcagttgcatgcaggtgtggcc 771
>gb|AY093288.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420) mRNA, complete cds Length = 586 Score = 71.9 bits (36), Expect = 2e-09 Identities = 143/179 (79%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 346 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 405 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 406 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 465 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 466 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 524
>gb|AY062543.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420; MXI10.14) mRNA, complete cds Length = 721 Score = 71.9 bits (36), Expect = 2e-09 Identities = 143/179 (79%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 393 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 452 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 453 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 512 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 513 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 571
>gb|AY062458.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420; MXI10.14) mRNA, complete cds Length = 720 Score = 71.9 bits (36), Expect = 2e-09 Identities = 143/179 (79%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 393 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 452 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 453 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 512 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 513 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 571
>gb|AY062437.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420; MXI10.14) mRNA, complete cds Length = 728 Score = 71.9 bits (36), Expect = 2e-09 Identities = 143/179 (79%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 397 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 456 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 457 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 516 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 517 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 575
>gb|AY059939.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420; MXI10.14) mRNA, complete cds Length = 758 Score = 71.9 bits (36), Expect = 2e-09 Identities = 143/179 (79%) Strand = Plus / Plus Query: 315 tactacgatggccggtactggacaatgtggaagctgcctatgttcggatgcaccgacgcc 374 ||||| ||||| || |||||||||||||||||||| || ||||||||||||||||| || Sbjct: 393 tactatgatggacgatactggacaatgtggaagcttccattgttcggatgcaccgactcc 452 Query: 375 acacaggtgctcaacgaggtggaggaggtcaagaaggagtaccctgacgcgtatgtccgn 434 | || ||| | || || || || || ||||||||||||||||| ||| | | | Sbjct: 453 gctcaagtgttgaaggaagttgaagaatgcaagaaggagtaccctggcgccttcattagg 512 Query: 435 atcatcggattcgacaacatgcgtcaggtgcagtgcgtcagcttcatcgccttcaagcc 493 ||||||||||||||||||| ||||| || || ||| |||| ||||| |||| |||||| Sbjct: 513 atcatcggattcgacaacacccgtcaagtccaatgcatcagtttcattgcctacaagcc 571 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,267,445 Number of Sequences: 3902068 Number of extensions: 3267445 Number of successful extensions: 65965 Number of sequences better than 10.0: 402 Number of HSP's better than 10.0 without gapping: 402 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 64628 Number of HSP's gapped (non-prelim): 1163 length of query: 497 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 475 effective length of database: 17,147,199,772 effective search space: 8144919891700 effective search space used: 8144919891700 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
