ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal29g07 |
|---|---|
| Clone Library Name | barley_pub |
>CARD6_HUMAN (Q9BX69) Caspase recruitment domain-containing protein 6| Length = 1037 Score = 33.5 bits (75), Expect = 0.48 Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Frame = -1 Query: 459 SCYCQVCLVRPLLCQAQQ---YQPYPELS*LPKPWQHQLSPCPSLSGTDSEPAKAHHPMA 289 SC Q +P C++ Q QP+P S KP Q + P P S T+ AKAHH A Sbjct: 974 SCQSQPSQTKPSPCKSTQPKPSQPWPPQS---KPSQPR-PPQPKSSSTNPSQAKAHHSKA 1029 Query: 288 PSQRPRWH 265 +R H Sbjct: 1030 GQKRGGKH 1037
>SYNJ1_RAT (Q62910) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 31.6 bits (70), Expect = 1.8 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 8/99 (8%) Frame = -3 Query: 571 IKLQPFT----MVLATSNAKMDILLPFVVVPDPKPLFKFKFV--MLLPSVSSTSTALPSP 410 +K PF VLA S A+ + V+ PDPK L + + S+SS S L P Sbjct: 1325 LKSDPFEDLSLSVLAVSKAQPSAQISPVLTPDPKMLIQLPSASQSKVNSLSSVSCMLTMP 1384 Query: 409 TVPALPRIELTSETLAAPAFAMPI--PFWDGFRASEGTP 299 VP + + + + A P ++P PF D A+ G P Sbjct: 1385 PVPEQSKSQESVGSSANPFPSLPTRNPFTDR-TAAPGNP 1422
>SYNJ1_MOUSE (Q8CHC4) Synaptojanin-1 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 1) Length = 1574 Score = 30.4 bits (67), Expect = 4.0 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 14/105 (13%) Frame = -3 Query: 571 IKLQPFT----MVLATSNAKMDILLPFVVVPDPKPLFKFKFVMLLPSVSST-----STAL 419 +K PF VLA S A+ + + V+ PDPK L + LPS S + S+ Sbjct: 1325 LKSDPFEDLSLSVLAVSKAQPSVQISPVLTPDPKMLIQ------LPSASQSQVNPLSSVS 1378 Query: 418 PSPTVPALPRIELTSETLAAPAFAMPI-----PFWDGFRASEGTP 299 PT P P + E++ + A P PF D A+ G P Sbjct: 1379 CMPTRPPGPEESKSQESMGSSANPFPSLPCRNPFTDR-TAAPGNP 1422
>IF2_GLOVI (Q7NH85) Translation initiation factor IF-2| Length = 925 Score = 30.0 bits (66), Expect = 5.3 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -3 Query: 448 PSVSSTSTALPSPTVPALPRIELTSETLAAPA 353 P+V + + LP PT+P LP E +E AAP+ Sbjct: 111 PAVPTEAQPLPIPTLPELPVPEQVAEQAAAPS 142
>CP4G1_DROME (Q9V3S0) Cytochrome P450 4g1 (EC 1.14.-.-) (CYPIVG1)| Length = 556 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/68 (26%), Positives = 35/68 (51%) Frame = +3 Query: 369 VSEVSSILGRAGTVGLGKAVDVLDTLGSSMTNLNLNSGFGSGTTTKGNKISILAFEVANT 548 V +++ R G + GK+ DV D + + ++ L++ G +GNK +FE A Sbjct: 172 VDHSKAVVARMG-LEAGKSFDVHDYMSQTTVDILLSTAMGVKKLPEGNK----SFEYAQA 226 Query: 549 IVKGCNLM 572 +V C+++ Sbjct: 227 VVDMCDII 234
>DSG1A_MOUSE (Q61495) Desmoglein-1 alpha precursor (Dsg1-alpha) (Desmoglein-1)| (Desmosomal glycoprotein I) (DG1) (DGI) Length = 1057 Score = 29.6 bits (65), Expect = 6.9 Identities = 19/61 (31%), Positives = 30/61 (49%) Frame = +3 Query: 369 VSEVSSILGRAGTVGLGKAVDVLDTLGSSMTNLNLNSGFGSGTTTKGNKISILAFEVANT 548 +SE++ G G G+G + V T+G+S T LN+ GT T G+ S + T Sbjct: 980 MSEIAGTAGLGGVGGIGSSGLVSTTMGASGTGLNM-----GGTATIGHMRSSSDHHFSQT 1034 Query: 549 I 551 + Sbjct: 1035 V 1035
>AMEL_MONDO (Q28462) Amelogenin| Length = 202 Score = 29.6 bits (65), Expect = 6.9 Identities = 17/54 (31%), Positives = 27/54 (50%) Frame = -1 Query: 414 AQQYQPYPELS*LPKPWQHQLSPCPSLSGTDSEPAKAHHPMAPSQRPRWHQKRQ 253 AQQ P P+ +P P QH ++P +P + + P+Q+P+ HQ Q Sbjct: 75 AQQPAP-PQQPVMPVPGQHPMAPTQHHQPNLPQPGQQPYQPQPAQQPQPHQPIQ 127
>MOBA_THIFE (P22898) Protein mobA (Fragment)| Length = 409 Score = 29.6 bits (65), Expect = 6.9 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 14/67 (20%) Frame = -1 Query: 411 QQYQPYPELS*---------LPKPWQHQLSPCPSLSGTDSEP-----AKAHHPMAPSQRP 274 QQ++PYP+L L + W+H+ S + G SEP +A+ P Q+ Sbjct: 326 QQFRPYPDLEQWQRMQKSPELAEQWRHRASEPQRIEGDRSEPPTPRDIRAYQPEIVGQQV 385 Query: 273 RWHQKRQ 253 + +K + Sbjct: 386 HYSRKEE 392
>PO121_MOUSE (Q8K3Z9) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) Length = 1200 Score = 29.3 bits (64), Expect = 9.0 Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 9/63 (14%) Frame = -3 Query: 535 SNAKMDILLPFVVVPDPKPLFKFKFVMLLPSVSSTSTALPSPT---------VPALPRIE 383 S A+ + P P P F ML P SS+S A P+P PA P+ E Sbjct: 653 SQAEQSVSTPASTASSPTPKPSMLFGMLSPPASSSSLATPAPACASPMFKPIFPATPKSE 712 Query: 382 LTS 374 S Sbjct: 713 SDS 715
>ARGD2_STAES (Q8CSG1) Acetylornithine aminotransferase 2 (EC 2.6.1.11) (ACOAT 2)| Length = 375 Score = 29.3 bits (64), Expect = 9.0 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 18/86 (20%) Frame = +3 Query: 369 VSEVSSILGRAGTV-----------------GLGKAVDVLDTLGSSMTNLNLNSGFGS-G 494 V EV + +GR G + GLG + + LG NL G+GS G Sbjct: 204 VDEVQTGIGRTGKLYAHEHYQLSPDIITLAKGLGNGLPIGAMLGKK--NLGHAFGYGSHG 261 Query: 495 TTTKGNKISILAFEVANTIVKGCNLM 572 TT GN++S+ A +I+ +L+ Sbjct: 262 TTFGGNRLSLAAANQTLSIINDADLL 287
>ARGD2_STAEQ (Q5HP24) Acetylornithine aminotransferase 2 (EC 2.6.1.11) (ACOAT 2)| Length = 375 Score = 29.3 bits (64), Expect = 9.0 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 18/86 (20%) Frame = +3 Query: 369 VSEVSSILGRAGTV-----------------GLGKAVDVLDTLGSSMTNLNLNSGFGS-G 494 V EV + +GR G + GLG + + LG NL G+GS G Sbjct: 204 VDEVQTGIGRTGKLYAHEHYQLSPDIITLAKGLGNGLPIGAMLGKK--NLGHAFGYGSHG 261 Query: 495 TTTKGNKISILAFEVANTIVKGCNLM 572 TT GN++S+ A +I+ +L+ Sbjct: 262 TTFGGNRLSLAAANQTLSIINDADLL 287 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,878,204 Number of Sequences: 219361 Number of extensions: 1359734 Number of successful extensions: 4880 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 4603 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4873 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5196311029 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
