ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal29f11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1291 bits (651), Expect = 0.0 Identities = 663/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 120050 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119992 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119991 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 119932 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119931 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119872 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119871 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119812 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119811 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119752 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119751 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119692 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119691 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119632 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119631 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 119572 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119571 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 119512 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119511 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 119452 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119451 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 119392 Query: 661 ctgctt 666 |||||| Sbjct: 119391 ctgctt 119386 Score = 1291 bits (651), Expect = 0.0 Identities = 663/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 94844 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 94902 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94903 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 94962 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94963 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95022 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95023 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95082 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95083 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95142 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95143 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95202 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95203 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95262 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95263 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 95322 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95323 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 95382 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95383 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 95442 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95443 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 95502 Query: 661 ctgctt 666 |||||| Sbjct: 95503 ctgctt 95508
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 118831 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 118773 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118772 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 118713 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118712 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 118653 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118652 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 118593 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118592 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 118533 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 118532 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 118473 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118472 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 118413 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118412 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 118353 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118352 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 118293 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118292 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 118233 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 118232 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 118173 Query: 661 ctgctt 666 |||||| Sbjct: 118172 ctgctt 118167
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 961 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 903 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 902 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 843 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 783 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 723 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 663 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 662 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 603 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 543 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 423 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 363 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 362 ttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 303 Query: 661 ctgctt 666 |||||| Sbjct: 302 ctgctt 297
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119915 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119857 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119856 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119797 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119796 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119737 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119736 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119677 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119676 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119617 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119616 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119557 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119556 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119497 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119496 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 119437 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119436 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 119377 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119376 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 119317 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 119316 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 119257 Query: 661 ctgctt 666 |||||| Sbjct: 119256 ctgctt 119251 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95241 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95299 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95300 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95359 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95360 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95419 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95420 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95479 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95480 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95539 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95540 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95599 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95600 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95659 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95660 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 95719 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95720 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 95779 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95780 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 95839 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 95840 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 95899 Query: 661 ctgctt 666 |||||| Sbjct: 95900 ctgctt 95905
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119915 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119857 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119856 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119797 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119796 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119737 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119736 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119677 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119676 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119617 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119616 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119557 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119556 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119497 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119496 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 119437 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119436 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 119377 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119376 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 119317 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 119316 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 119257 Query: 661 ctgctt 666 |||||| Sbjct: 119256 ctgctt 119251 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95241 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95299 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95300 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95359 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95360 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95419 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95420 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95479 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95480 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95539 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95540 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95599 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95600 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95659 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95660 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 95719 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95720 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 95779 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95780 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 95839 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 95840 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 95899 Query: 661 ctgctt 666 |||||| Sbjct: 95900 ctgctt 95905
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119864 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119806 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119805 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119746 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119745 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119686 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119685 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119626 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119625 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119566 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119565 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119506 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119505 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119446 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119445 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 119386 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119385 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 119326 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119325 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 119266 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 119265 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 119206 Query: 661 ctgctt 666 |||||| Sbjct: 119205 ctgctt 119200 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95186 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95244 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95245 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95304 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95305 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95364 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95365 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95424 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95425 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95484 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95485 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95544 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95545 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95604 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95605 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 95664 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95665 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 95724 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95725 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 95784 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 95785 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 95844 Query: 661 ctgctt 666 |||||| Sbjct: 95845 ctgctt 95850
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 31507819 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 31507877 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31507878 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 31507937 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507938 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 31507997 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507998 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 31508057 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508058 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 31508117 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31508118 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 31508177 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508178 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 31508237 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508238 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 31508297 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508298 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 31508357 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508358 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 31508417 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 31508418 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 31508477 Query: 661 ctgctt 666 |||||| Sbjct: 31508478 ctgctt 31508483
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 84777 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 84719 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 84718 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 84659 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84658 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 84599 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84598 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 84539 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84538 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 84479 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 84478 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 84419 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84418 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 84359 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84358 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 84299 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84298 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 84239 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84238 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 84179 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 84178 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 84119 Query: 661 ctgctt 666 |||||| Sbjct: 84118 ctgctt 84113
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119884 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119826 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119825 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119766 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119765 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119706 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119705 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119646 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119645 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119586 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119585 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119526 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119525 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119466 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119465 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 119406 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119405 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 119346 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119345 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 119286 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 119285 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 119226 Query: 661 ctgctt 666 |||||| Sbjct: 119225 ctgctt 119220 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95234 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95292 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95293 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95352 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95353 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95412 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95413 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95472 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95473 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95532 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95533 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95592 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95593 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95652 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95653 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 95712 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95713 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 95772 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95773 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 95832 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 95833 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 95892 Query: 661 ctgctt 666 |||||| Sbjct: 95893 ctgctt 95898
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 122283 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 122341 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 122342 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 122401 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122402 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 122461 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122462 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 122521 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122522 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 122581 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 122582 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 122641 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122642 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 122701 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122702 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 122761 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122762 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 122821 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122822 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 122881 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122882 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 122941 Query: 661 ctgctt 666 |||||| Sbjct: 122942 ctgctt 122947 Score = 1259 bits (635), Expect = 0.0 Identities = 659/666 (98%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 14008 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 14066 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 14067 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 14126 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14127 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 14186 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14187 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 14246 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14247 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 14306 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 14307 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 14366 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 14367 ccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggct 14426 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14427 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 14486 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14487 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 14546 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14547 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 14606 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 14607 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 14666 Query: 661 ctgctt 666 |||||| Sbjct: 14667 ctgctt 14672
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20243 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 20301 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 20302 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 20361 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20362 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 20421 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20422 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 20481 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20482 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 20541 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 20542 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 20601 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20602 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 20661 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20662 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 20721 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20722 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 20781 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20782 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 20841 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 20842 ttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 20901 Query: 661 ctgctt 666 |||||| Sbjct: 20902 ctgctt 20907 Score = 1251 bits (631), Expect = 0.0 Identities = 658/666 (98%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 44875 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 44817 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 44816 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 44757 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44756 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 44697 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44696 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 44637 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44636 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 44577 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 44576 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 44517 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44516 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 44457 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44456 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 44397 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44396 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 44337 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44336 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 44277 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||||| ||||||| |||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 44276 ttaagggaatggaaccctccggagccgtagtgaaagcgagtcttcatagggcgattgtca 44217 Query: 661 ctgctt 666 |||||| Sbjct: 44216 ctgctt 44211
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 58603 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 58545 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 58544 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 58485 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58484 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 58425 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58424 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 58365 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58364 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 58305 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 58304 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 58245 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58244 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 58185 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58184 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 58125 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58124 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 58065 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58064 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 58005 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 58004 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 57945 Query: 661 ctgctt 666 |||||| Sbjct: 57944 ctgctt 57939
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 1504 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 1446 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1445 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 1386 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1385 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 1326 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1325 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 1266 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1265 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 1206 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1205 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 1146 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1145 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 1086 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 1026 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1025 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 966 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 965 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 906 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 905 ttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 846 Query: 661 ctgctt 666 |||||| Sbjct: 845 ctgctt 840
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9268168 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9268226 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9268227 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9268286 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268287 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9268346 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268347 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9268406 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268407 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9268466 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9268467 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9268526 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268527 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 9268586 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268587 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 9268646 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268647 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 9268706 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268707 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 9268766 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 9268767 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 9268826 Query: 661 ctgctt 666 |||||| Sbjct: 9268827 ctgctt 9268832 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9227668 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9227726 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9227727 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9227786 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227787 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9227846 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227847 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9227906 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227907 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9227966 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9227967 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9228026 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228027 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 9228086 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228087 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 9228146 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228147 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 9228206 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228207 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 9228266 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 9228267 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 9228326 Query: 661 ctgctt 666 |||||| Sbjct: 9228327 ctgctt 9228332 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9164257 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9164315 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9164316 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9164375 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164376 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9164435 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164436 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9164495 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164496 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9164555 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9164556 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9164615 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164616 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 9164675 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164676 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 9164735 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164736 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 9164795 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164796 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 9164855 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 9164856 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 9164915 Query: 661 ctgctt 666 |||||| Sbjct: 9164916 ctgctt 9164921 Score = 1259 bits (635), Expect = 0.0 Identities = 659/666 (98%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9056082 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9056140 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9056141 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9056200 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056201 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9056260 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056261 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 9056320 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056321 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9056380 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9056381 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9056440 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 9056441 ccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggct 9056500 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056501 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 9056560 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056561 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 9056620 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056621 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 9056680 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 9056681 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 9056740 Query: 661 ctgctt 666 |||||| Sbjct: 9056741 ctgctt 9056746 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 432 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 491 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 492 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 538 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 19938153 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 19938211 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19938212 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 19938271 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938272 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 19938331 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938332 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 19938391 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938392 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 19938451 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19938452 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 19938511 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938512 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 19938571 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938572 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 19938631 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938632 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 19938691 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938692 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 19938751 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 19938752 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 19938811 Query: 661 ctgctt 666 |||||| Sbjct: 19938812 ctgctt 19938817 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10277278 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10277220 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10277219 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10277160 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277159 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10277100 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277099 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10277040 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277039 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10276980 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10276979 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 10276920 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276919 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 10276860 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276859 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 10276800 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276799 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 10276740 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276739 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 10276680 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10276679 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 10276620 Query: 661 ctgctt 666 |||||| Sbjct: 10276619 ctgctt 10276614 Score = 1259 bits (635), Expect = 0.0 Identities = 659/666 (98%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10387020 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10387078 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10387079 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10387138 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10387198 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10387258 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10387318 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10387319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 10387378 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 10387438 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10387439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccc 10387498 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387499 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 10387558 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387559 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 10387618 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10387619 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 10387678 Query: 661 ctgctt 666 |||||| Sbjct: 10387679 ctgctt 10387684 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 450 agtaccgtgagggaaaggtgaaaagaacccc 480 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 275 ttgtgctgctaggcgaagcggttgagtgc 303 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 31598335 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 31598393 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31598394 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 31598453 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598454 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 31598513 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598514 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 31598573 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598574 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 31598633 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 31598634 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 31598693 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598694 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 31598753 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598754 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 31598813 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598814 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 31598873 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598874 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 31598933 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 31598934 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 31598993 Query: 661 ctgctt 666 |||||| Sbjct: 31598994 ctgctt 31598999
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 33525651 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 33525709 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 33525710 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 33525769 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525770 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 33525829 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525830 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 33525889 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525890 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 33525949 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 33525950 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 33526009 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526010 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 33526069 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526070 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 33526129 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526130 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 33526189 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526190 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 33526249 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 33526250 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 33526309 Query: 661 ctgctt 666 |||||| Sbjct: 33526310 ctgctt 33526315 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 454 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 513 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 514 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 573 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 574 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 3e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 468 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 527 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 528 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 577 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 461 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 499 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttc 58 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 47890 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 47832 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 47831 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 47772 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47771 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 47712 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47711 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 47652 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47651 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 47592 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 47591 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 47532 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47531 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 47472 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47471 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 47412 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47411 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 47352 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47351 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 47292 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 47291 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 47232 Query: 661 ctgctt 666 |||||| Sbjct: 47231 ctgctt 47226
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 70848 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 70906 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 70907 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 70966 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70967 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 71026 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71027 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 71086 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71087 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 71146 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 71147 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 71206 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71207 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 71266 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71267 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 71326 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71327 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 71386 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71387 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 71446 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 71447 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 71506 Query: 661 ctgctt 666 |||||| Sbjct: 71507 ctgctt 71512 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 123714 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 123656 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123655 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 123596 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123595 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 123536 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123535 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 123476 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123475 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 123416 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123415 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 123356 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123355 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 123296 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123295 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 123236 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123235 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 123176 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123175 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 123116 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 123115 ttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 123056 Query: 661 ctgctt 666 |||||| Sbjct: 123055 ctgctt 123050 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 99123 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 99181 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99182 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 99241 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99242 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 99301 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99302 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 99361 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99362 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 99421 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99422 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 99481 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99482 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 99541 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99542 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 99601 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99602 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 99661 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99662 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 99721 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 99722 ttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 99781 Query: 661 ctgctt 666 |||||| Sbjct: 99782 ctgctt 99787
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 138 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 318 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 319 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 378 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 498 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 558 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 618 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 619 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 678 Query: 661 ctgctt 666 |||||| Sbjct: 679 ctgctt 684
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 19949429 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 19949487 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19949488 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 19949547 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949548 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 19949607 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949608 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 19949667 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949668 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 19949727 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 19949728 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 19949787 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949788 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 19949847 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949848 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 19949907 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949908 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 19949967 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949968 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 19950027 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 19950028 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 19950087 Query: 661 ctgctt 666 |||||| Sbjct: 19950088 ctgctt 19950093 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10283317 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10283259 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10283258 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10283199 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283198 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10283139 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283138 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10283079 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283078 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10283019 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10283018 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 10282959 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282958 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 10282899 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282898 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 10282839 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282838 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 10282779 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282778 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 10282719 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10282718 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 10282659 Query: 661 ctgctt 666 |||||| Sbjct: 10282658 ctgctt 10282653 Score = 1259 bits (635), Expect = 0.0 Identities = 659/666 (98%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 10393059 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 10393117 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10393118 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 10393177 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393178 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 10393237 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393238 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 10393297 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393298 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 10393357 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10393358 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 10393417 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393418 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 10393477 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10393478 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccc 10393537 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393538 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 10393597 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393598 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 10393657 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 10393658 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 10393717 Query: 661 ctgctt 666 |||||| Sbjct: 10393718 ctgctt 10393723 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 275 ttgtgctgctaggcgaagcggttgagtgc 303 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 124431 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 124373 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 124372 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 124313 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124312 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 124253 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124252 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 124193 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124192 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 124133 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 124132 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 124073 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124072 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 124013 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124012 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 123953 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123952 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 123893 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123892 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 123833 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 123832 ttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 123773 Query: 661 ctgctt 666 |||||| Sbjct: 123772 ctgctt 123767 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 99800 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 99858 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99859 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 99918 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99919 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 99978 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99979 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 100038 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100039 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 100098 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 100099 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 100158 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100159 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 100218 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100219 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 100278 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100279 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 100338 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100339 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 100398 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 100399 ttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 100458 Query: 661 ctgctt 666 |||||| Sbjct: 100459 ctgctt 100464
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 119858 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 119800 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119799 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 119740 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119739 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 119680 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119679 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 119620 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119619 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 119560 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119559 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 119500 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119499 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 119440 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 119380 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119379 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 119320 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119319 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 119260 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 119259 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 119200 Query: 661 ctgctt 666 |||||| Sbjct: 119199 ctgctt 119194 Score = 1267 bits (639), Expect = 0.0 Identities = 660/666 (99%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 95181 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 95239 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95240 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 95299 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95300 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95359 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95360 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 95419 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95420 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 95479 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95480 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 95539 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95540 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 95599 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95600 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 95659 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95660 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 95719 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95720 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 95779 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 95780 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 95839 Query: 661 ctgctt 666 |||||| Sbjct: 95840 ctgctt 95845
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1259 bits (635), Expect = 0.0 Identities = 659/666 (98%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 140816 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 140874 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 140875 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 140934 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140935 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 140994 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140995 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 141054 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141055 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 141114 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141115 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 141174 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 141175 ccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggct 141234 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141235 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 141294 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141295 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 141354 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141355 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 141414 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 141415 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 141474 Query: 661 ctgctt 666 |||||| Sbjct: 141475 ctgctt 141480
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1259 bits (635), Expect = 0.0 Identities = 659/666 (98%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 93412 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 93470 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 93471 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 93530 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93531 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 93590 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93591 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 93650 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93651 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 93710 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 93711 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 93770 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93771 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 93830 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 93831 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccc 93890 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93891 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 93950 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93951 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 94010 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 94011 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 94070 Query: 661 ctgctt 666 |||||| Sbjct: 94071 ctgctt 94076
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1259 bits (635), Expect = 0.0 Identities = 659/666 (98%), Gaps = 1/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 27476 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 27534 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 27535 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 27594 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27595 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 27654 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27655 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 27714 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27715 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 27774 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 27775 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 27834 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27835 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 27894 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 27895 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaacccc 27954 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27955 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 28014 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28015 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 28074 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 28075 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 28134 Query: 661 ctgctt 666 |||||| Sbjct: 28135 ctgctt 28140
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1251 bits (631), Expect = 0.0 Identities = 658/666 (98%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 9242113 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 9242055 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9242054 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 9241995 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241994 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 9241935 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9241934 gaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaacc 9241875 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241874 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 9241815 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9241814 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 9241755 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241754 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 9241695 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241694 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 9241635 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241634 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 9241575 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9241574 gtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttgg 9241515 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 9241514 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 9241455 Query: 661 ctgctt 666 |||||| Sbjct: 9241454 ctgctt 9241449 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 157 actgaaacatcttagtagccagaggaaaagaaag 190 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1251 bits (631), Expect = 0.0 Identities = 658/666 (98%), Gaps = 1/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 53326 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 53268 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 53267 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 53208 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53207 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 53148 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 53147 gaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaacc 53088 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53087 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 53028 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 53027 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 52968 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52967 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 52908 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52907 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 52848 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52847 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 52788 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 52787 gtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttgg 52728 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 52727 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 52668 Query: 661 ctgctt 666 |||||| Sbjct: 52667 ctgctt 52662
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1205 bits (608), Expect = 0.0 Identities = 655/667 (98%), Gaps = 3/667 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 59 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 123654 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 123596 Query: 60 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123595 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 123536 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123535 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 123476 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123475 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 123416 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 123415 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 123356 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 123355 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 123297 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123296 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 123237 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123236 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 123177 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123176 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 123117 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123116 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 123057 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 123056 gttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtc 122997 Query: 660 actgctt 666 ||||||| Sbjct: 122996 actgctt 122990 Score = 1205 bits (608), Expect = 0.0 Identities = 655/667 (98%), Gaps = 3/667 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 59 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 99083 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 99141 Query: 60 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99142 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 99201 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99202 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 99261 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99262 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 99321 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 99322 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 99381 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 99382 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 99440 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99441 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 99500 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99501 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 99560 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99561 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 99620 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99621 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 99680 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 99681 gttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtc 99740 Query: 660 actgctt 666 ||||||| Sbjct: 99741 actgctt 99747
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1205 bits (608), Expect = 0.0 Identities = 655/667 (98%), Gaps = 3/667 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 59 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 5436 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 5494 Query: 60 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5495 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 5554 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5555 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 5614 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5615 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 5674 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5675 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 5734 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 5735 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 5793 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5794 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 5853 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5854 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 5913 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5914 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 5973 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5974 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 6033 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6034 gttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtc 6093 Query: 660 actgctt 666 ||||||| Sbjct: 6094 actgctt 6100
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1205 bits (608), Expect = 0.0 Identities = 655/667 (98%), Gaps = 3/667 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaag-ggcgtagcaagcgacgaaatgcttcg 59 ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct: 24 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 82 Query: 60 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 83 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 142 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 202 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 262 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 263 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 322 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 323 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 381 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 441 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 501 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 561 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 621 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 622 gttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtc 681 Query: 660 actgctt 666 ||||||| Sbjct: 682 actgctt 688
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1166 bits (588), Expect = 0.0 Identities = 606/611 (99%), Gaps = 1/611 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 17 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 75 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 76 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 135 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 195 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 255 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 315 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 316 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 375 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 435 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 495 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 555 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 615 Query: 601 ttaagggaacg 611 ||||||||||| Sbjct: 616 ttaagggaacg 626
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1148 bits (579), Expect = 0.0 Identities = 588/591 (99%) Strand = Plus / Plus Query: 76 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 135 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 136 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 196 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 256 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 316 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 375 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 376 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 436 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 496 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 556 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 615 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 540 Query: 616 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 541 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 591
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1132 bits (571), Expect = 0.0 Identities = 583/587 (99%) Strand = Plus / Plus Query: 80 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 139 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 260 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 320 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 379 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 380 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 440 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 500 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 560 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 540 Query: 620 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 541 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 587
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1128 bits (569), Expect = 0.0 Identities = 581/585 (99%) Strand = Plus / Plus Query: 26 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 85 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 86 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 145 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 146 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 206 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 266 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 325 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 326 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 385 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 386 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 446 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 Query: 506 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 565 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 481 aaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttg 540 Query: 566 aagaatgagccggcgactcataggcagtggcttggttaagggaac 610 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 aagaatgagccggcgactcataggcagtggcttggttaagggaac 585
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 1057 bits (533), Expect = 0.0 Identities = 635/666 (95%), Gaps = 10/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 134201 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 134143 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 134142 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 134084 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134083 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 134024 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134023 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 133964 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 133963 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaa 133904 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 133903 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 133844 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133843 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 133784 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133783 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 133724 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 133723 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaat 133667 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133666 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 133607 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 133606 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 133552 Query: 661 ctgctt 666 |||||| Sbjct: 133551 ctgctt 133546 Score = 1057 bits (533), Expect = 0.0 Identities = 635/666 (95%), Gaps = 10/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 103770 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 103828 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 103829 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 103887 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103888 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 103947 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103948 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104007 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104008 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaa 104067 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 104068 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 104127 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104128 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 104187 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104188 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 104247 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 104248 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaat 104304 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104305 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 104364 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104365 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtca 104419 Query: 661 ctgctt 666 |||||| Sbjct: 104420 ctgctt 104425
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 1041 bits (525), Expect = 0.0 Identities = 633/666 (95%), Gaps = 10/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 139564 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 139506 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 139505 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 139447 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139446 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 139387 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139386 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 139327 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 139326 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 139267 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||| Sbjct: 139266 tactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgac 139207 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139206 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 139147 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139146 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 139087 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 139086 catcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaat 139030 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139029 ttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 138970 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||| ||||||||||||||||| ||||||| ||||||| Sbjct: 138969 ttaag-----ggaacccaccggagccatagcgaaagcgagtcttcatagggcaattgtca 138915 Query: 661 ctgctt 666 |||||| Sbjct: 138914 ctgctt 138909 Score = 1041 bits (525), Expect = 0.0 Identities = 633/666 (95%), Gaps = 10/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 110381 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 110439 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 110440 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 110498 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110499 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 110558 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110559 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 110618 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 110619 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 110678 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||||||||||| | |||||||||||||||||||||||| ||||| |||||||| Sbjct: 110679 tactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgac 110738 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110739 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 110798 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110799 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 110858 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 110859 catcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaat 110915 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110916 ttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 110975 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||| ||||||||||||||||| ||||||| ||||||| Sbjct: 110976 ttaag-----ggaacccaccggagccatagcgaaagcgagtcttcatagggcaattgtca 111030 Query: 661 ctgctt 666 |||||| Sbjct: 111031 ctgctt 111036
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 1041 bits (525), Expect = 0.0 Identities = 633/666 (95%), Gaps = 10/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 127842 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 127784 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 127783 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 127725 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127724 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 127665 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 127664 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 127605 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 127604 gtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggag 127545 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||| ||||||||||||| |||||||| Sbjct: 127544 tgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgac 127485 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127484 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 127425 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127424 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 127365 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 127364 catcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggaggagaat 127308 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127307 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 127248 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 127247 ttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtca 127193 Query: 661 ctgctt 666 |||||| Sbjct: 127192 ctgctt 127187 Score = 1041 bits (525), Expect = 0.0 Identities = 633/666 (95%), Gaps = 10/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 107080 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 107138 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 107139 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 107197 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107198 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 107257 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 107258 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 107317 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 107318 gtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggag 107377 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||| ||||||||||||| |||||||| Sbjct: 107378 tgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgac 107437 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107438 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 107497 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107498 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 107557 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 107558 catcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggaggagaat 107614 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107615 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 107674 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||||| |||||| |||||||||||||||||||||| ||||||||||||||| Sbjct: 107675 ttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgtca 107729 Query: 661 ctgctt 666 |||||| Sbjct: 107730 ctgctt 107735
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 1033 bits (521), Expect = 0.0 Identities = 632/666 (94%), Gaps = 10/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 142086 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 142028 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| | Sbjct: 142027 ggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-t 141969 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141968 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 141909 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141908 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 141849 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 141848 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgag 141789 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||||||||||| | ||||||||| |||||||||||||| ||||| |||||||| Sbjct: 141788 tactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgac 141729 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 141728 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 141669 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141668 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 141609 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 141608 catcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaat 141552 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141551 ttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 141492 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 141491 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 141437 Query: 661 ctgctt 666 |||||| Sbjct: 141436 ctgctt 141431 Score = 1033 bits (521), Expect = 0.0 Identities = 632/666 (94%), Gaps = 10/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 111571 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 111629 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| | Sbjct: 111630 ggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-t 111688 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111689 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 111748 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111749 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 111808 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111809 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgag 111868 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||||||||||| | ||||||||| |||||||||||||| ||||| |||||||| Sbjct: 111869 tactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgac 111928 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 111929 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 111988 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111989 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 112048 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 112049 catcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaat 112105 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112106 ttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 112165 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 112166 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 112220 Query: 661 ctgctt 666 |||||| Sbjct: 112221 ctgctt 112226
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 1023 bits (516), Expect = 0.0 Identities = 631/666 (94%), Gaps = 14/666 (2%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 134959 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 134901 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 134900 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 134842 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134841 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 134782 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134781 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 134722 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 134721 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 134662 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| || Sbjct: 134661 tgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaac 134602 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134601 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 134542 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134541 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 134482 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 134481 catcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa- 134426 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134425 ---atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 134369 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 134368 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 134314 Query: 661 ctgctt 666 |||||| Sbjct: 134313 ctgctt 134308 Score = 1023 bits (516), Expect = 0.0 Identities = 631/666 (94%), Gaps = 14/666 (2%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 105323 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 105381 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 105382 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 105440 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105441 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105500 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105501 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105560 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 105561 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 105620 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| || Sbjct: 105621 tgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaac 105680 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105681 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 105740 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105741 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 105800 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 105801 catcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa- 105856 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105857 ---atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 105913 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 105914 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 105968 Query: 661 ctgctt 666 |||||| Sbjct: 105969 ctgctt 105974
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 1019 bits (514), Expect = 0.0 Identities = 631/666 (94%), Gaps = 12/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 136569 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 136511 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 136510 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-t 136452 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136451 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136392 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136391 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136332 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 136331 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 136272 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 136271 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 136212 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136211 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 136152 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 136151 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 136092 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 136091 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 136035 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136034 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 135977 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 135976 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 135922 Query: 661 ctgctt 666 |||||| Sbjct: 135921 ctgctt 135916 Score = 1019 bits (514), Expect = 0.0 Identities = 631/666 (94%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 105856 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 105914 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 105915 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-t 105973 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105974 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106033 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106034 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106093 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 106094 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 106153 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 106154 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 106213 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106214 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106273 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106274 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 106333 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106334 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 106390 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106391 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 106448 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 106449 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 106503 Query: 661 ctgctt 666 |||||| Sbjct: 106504 ctgctt 106509
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 1001 bits (505), Expect = 0.0 Identities = 629/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 132753 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 132695 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 132694 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 132636 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132635 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 132576 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132575 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 132516 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 132515 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 132456 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132455 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 132396 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132395 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 132336 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 132335 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 132276 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132275 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccc 132219 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132218 g-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 132160 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 132159 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 132105 Query: 661 ctgctt 666 |||||| Sbjct: 132104 ctgctt 132099 Score = 1001 bits (505), Expect = 0.0 Identities = 629/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 104125 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 104183 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 104184 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 104242 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104243 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 104302 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104303 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104362 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104363 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 104422 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104423 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 104482 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104483 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 104542 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104543 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 104602 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104603 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccc 104659 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104660 g-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 104718 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 104719 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 104773 Query: 661 ctgctt 666 |||||| Sbjct: 104774 ctgctt 104779
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 1001 bits (505), Expect = 0.0 Identities = 629/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 132976 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 132918 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 132917 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 132859 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132858 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 132799 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132798 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 132739 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 132738 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggag 132679 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 132678 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 132619 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132618 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 132559 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 132558 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 132499 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132498 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-cc 132443 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132442 ctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 132383 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 132382 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 132328 Query: 661 ctgctt 666 |||||| Sbjct: 132327 ctgctt 132322 Score = 1001 bits (505), Expect = 0.0 Identities = 629/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 103788 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103846 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 103847 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 103905 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103906 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 103965 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103966 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104025 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 104026 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggag 104085 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 104086 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 104145 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104146 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 104205 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104206 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 104265 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104266 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-cc 104321 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104322 ctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 104381 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 104382 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 104436 Query: 661 ctgctt 666 |||||| Sbjct: 104437 ctgctt 104442
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 1001 bits (505), Expect = 0.0 Identities = 629/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 132746 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 132688 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 132687 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 132629 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132628 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 132569 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132568 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 132509 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 132508 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 132449 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132448 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 132389 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 132329 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 132328 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 132269 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132268 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccc 132212 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132211 g-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 132153 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 132152 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 132098 Query: 661 ctgctt 666 |||||| Sbjct: 132097 ctgctt 132092 Score = 1001 bits (505), Expect = 0.0 Identities = 629/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 104123 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 104181 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 104182 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 104240 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104241 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 104300 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104301 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104360 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104361 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 104420 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104421 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 104480 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104481 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 104540 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104541 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 104600 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104601 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccc 104657 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104658 g-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 104716 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 104717 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 104771 Query: 661 ctgctt 666 |||||| Sbjct: 104772 ctgctt 104777
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 993 bits (501), Expect = 0.0 Identities = 628/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 131645 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 131587 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 131586 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 131528 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131527 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 131468 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131467 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 131408 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 131407 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 131348 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 131347 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 131288 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131287 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 131228 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 131227 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 131168 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 131167 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccc 131111 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131110 g-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 131052 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 131051 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 130997 Query: 661 ctgctt 666 |||||| Sbjct: 130996 ctgctt 130991 Score = 993 bits (501), Expect = 0.0 Identities = 628/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 102990 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103048 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 103049 ggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-t 103107 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103108 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 103167 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103168 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 103227 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 103228 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaa 103287 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 103288 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 103347 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103348 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 103407 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 103408 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 103467 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 103468 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccc 103524 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103525 g-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 103583 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 103584 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 103638 Query: 661 ctgctt 666 |||||| Sbjct: 103639 ctgctt 103644
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 993 bits (501), Expect = 0.0 Identities = 628/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 133937 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 133879 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 133878 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 133820 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133819 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 133760 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133759 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 133700 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 133699 gtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggag 133640 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 133639 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 133580 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133579 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 133520 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 133519 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 133460 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 133459 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-cc 133404 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133403 ctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 133344 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 133343 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 133289 Query: 661 ctgctt 666 |||||| Sbjct: 133288 ctgctt 133283 Score = 993 bits (501), Expect = 0.0 Identities = 628/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 104712 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 104770 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 104771 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 104829 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104830 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 104889 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104890 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 104949 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 104950 gtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggag 105009 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 105010 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 105069 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105070 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 105129 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105130 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 105189 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 105190 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-cc 105245 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105246 ctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 105305 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 105306 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 105360 Query: 661 ctgctt 666 |||||| Sbjct: 105361 ctgctt 105366
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 985 bits (497), Expect = 0.0 Identities = 627/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 140338 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 140280 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 140279 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 140221 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140220 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 140161 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140160 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 140101 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 140100 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaa 140041 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 140040 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 139981 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139980 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 139921 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 139920 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 139861 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | || ||||||||||||||||| | | Sbjct: 139860 catcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-ac 139805 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139804 gggggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 139745 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 139744 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 139690 Query: 661 ctgctt 666 |||||| Sbjct: 139689 ctgctt 139684 Score = 985 bits (497), Expect = 0.0 Identities = 627/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 109722 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 109780 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 109781 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 109839 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109840 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 109899 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109900 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 109959 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 109960 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaa 110019 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 110020 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 110079 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110080 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 110139 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 110140 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 110199 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | || ||||||||||||||||| | | Sbjct: 110200 catcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-ac 110255 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110256 gggggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 110315 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 110316 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 110370 Query: 661 ctgctt 666 |||||| Sbjct: 110371 ctgctt 110376
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 985 bits (497), Expect = 0.0 Identities = 627/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 21 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 80 ggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-t 138 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||| | |||||| |||||||||||||||||||| ||| Sbjct: 259 gtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggag 318 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| Sbjct: 319 tgccgcaccctagatggcgagagtccagtagccgagagcatcactagcttatgctctgac 378 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 438 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 439 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 498 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 499 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-cc 554 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 ctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 614 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 615 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 669 Query: 661 ctgctt 666 |||||| Sbjct: 670 ctgctt 675
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 977 bits (493), Expect = 0.0 Identities = 626/666 (93%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 507 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 508 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccc 564 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 g-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 623 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 624 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtca 678 Query: 661 ctgctt 666 |||||| Sbjct: 679 ctgctt 684
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136278 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 136220 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 136219 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 136161 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136160 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136101 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136100 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136041 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 136040 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 135981 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135980 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 135921 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135920 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135861 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135860 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135801 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135800 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 135744 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135743 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 135686 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 135685 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 135631 Query: 660 actgctt 666 ||||||| Sbjct: 135630 actgctt 135624 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106352 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106410 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 106411 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 106469 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106470 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106529 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106530 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106589 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106590 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 106649 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106650 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 106709 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106710 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106769 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106770 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106829 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106830 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 106886 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106887 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 106944 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106945 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 106999 Query: 660 actgctt 666 ||||||| Sbjct: 107000 actgctt 107006
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136916 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 136858 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 136857 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 136799 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136798 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136739 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136738 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136679 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 136678 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 136619 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 136618 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 136559 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136558 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 136499 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 136498 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 136439 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 136438 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 136382 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136381 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 136324 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 136323 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 136269 Query: 660 actgctt 666 ||||||| Sbjct: 136268 actgctt 136262 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106641 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106699 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 106700 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 106758 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106759 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106818 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106819 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106878 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 106879 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 106938 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 106939 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 106998 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106999 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 107058 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 107059 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 107118 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 107119 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 107175 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107176 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 107233 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 107234 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 107288 Query: 660 actgctt 666 ||||||| Sbjct: 107289 actgctt 107295
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 1546 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 1604 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 1605 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 1663 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1664 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 1723 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1724 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 1783 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 1784 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 1843 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1844 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 1903 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1904 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 1963 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1964 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 2023 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 2024 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 2080 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2081 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 2138 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 2139 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 2193 Query: 660 actgctt 666 ||||||| Sbjct: 2194 actgctt 2200
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135524 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135466 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135465 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135407 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135406 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135347 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135346 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135287 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135286 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135227 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135226 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135167 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135166 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135107 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135106 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135047 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135046 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 134990 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134989 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 134932 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 134931 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 134877 Query: 660 actgctt 666 ||||||| Sbjct: 134876 actgctt 134870 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105512 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105570 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105571 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105629 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105630 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105689 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105690 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105749 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105750 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105809 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105810 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 105869 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105870 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105929 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105930 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 105989 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 105990 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 106046 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106047 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 106104 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106105 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 106159 Query: 660 actgctt 666 ||||||| Sbjct: 106160 actgctt 106166
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135659 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135601 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135600 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135542 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135541 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135482 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135481 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135422 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135421 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135362 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135361 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135302 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135301 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135242 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135241 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135182 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135181 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 135125 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135124 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 135067 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 135066 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 135012 Query: 660 actgctt 666 ||||||| Sbjct: 135011 actgctt 135005 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105684 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105742 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105743 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105801 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105802 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105861 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105862 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105921 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105922 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105981 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105982 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 106041 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106042 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106101 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106102 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106161 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106162 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 106218 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106219 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 106276 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106277 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 106331 Query: 660 actgctt 666 ||||||| Sbjct: 106332 actgctt 106338
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135657 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135599 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135598 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135540 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135539 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135480 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135479 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135420 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135419 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135360 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135359 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135300 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135299 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135240 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135239 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135180 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135179 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 135123 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135122 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 135065 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 135064 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 135010 Query: 660 actgctt 666 ||||||| Sbjct: 135009 actgctt 135003 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105681 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105739 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105740 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105798 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105799 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105858 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105859 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105918 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105919 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105978 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105979 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 106038 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106039 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106098 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106099 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106158 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106159 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 106215 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106216 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 106273 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106274 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 106328 Query: 660 actgctt 666 ||||||| Sbjct: 106329 actgctt 106335
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135569 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135511 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135510 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135452 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135451 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135392 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135391 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135332 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135331 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135272 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135271 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135212 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135211 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135152 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135151 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135092 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135091 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 135035 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135034 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 134977 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 134976 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 134922 Query: 660 actgctt 666 ||||||| Sbjct: 134921 actgctt 134915 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105559 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105617 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105618 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105676 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105677 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105736 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105737 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105796 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105797 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105856 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105857 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 105916 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105917 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105976 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105977 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106036 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106037 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 106093 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106094 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 106151 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106152 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 106206 Query: 660 actgctt 666 ||||||| Sbjct: 106207 actgctt 106213
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136276 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 136218 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 136217 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 136159 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136158 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 136099 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136098 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 136039 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 136038 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 135979 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135978 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 135919 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135918 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135859 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135858 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135799 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135798 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 135742 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135741 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 135684 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 135683 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 135629 Query: 660 actgctt 666 ||||||| Sbjct: 135628 actgctt 135622 Score = 973 bits (491), Expect = 0.0 Identities = 627/667 (94%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106350 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106408 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 106409 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 106467 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106468 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106527 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106528 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106587 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106588 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 106647 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106648 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 106707 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106708 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106767 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106768 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106827 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106828 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 106884 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106885 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 106942 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106943 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 106997 Query: 660 actgctt 666 ||||||| Sbjct: 106998 actgctt 107004
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 965 bits (487), Expect = 0.0 Identities = 626/667 (93%), Gaps = 13/667 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 136007 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135949 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| | Sbjct: 135948 ggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-t 135890 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135889 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135830 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135829 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135770 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135769 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 135710 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 135709 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 135650 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135649 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135590 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135589 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135530 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135529 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 135473 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135472 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 135415 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 135414 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 135360 Query: 660 actgctt 666 ||||||| Sbjct: 135359 actgctt 135353 Score = 965 bits (487), Expect = 0.0 Identities = 626/667 (93%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 106131 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 106189 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| | Sbjct: 106190 ggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-t 106248 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106249 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106308 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106309 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106368 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106369 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccga 106428 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 106429 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 106488 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106489 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106548 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106549 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106608 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106609 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 106665 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106666 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 106723 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106724 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 106778 Query: 660 actgctt 666 ||||||| Sbjct: 106779 actgctt 106785
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 965 bits (487), Expect = 0.0 Identities = 626/667 (93%), Gaps = 13/667 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 135536 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 135478 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 135477 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 135419 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135418 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135359 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135358 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135299 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135298 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 135239 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 135238 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 135179 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135178 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135119 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 135118 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 135059 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135058 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 135002 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135001 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttg 134944 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 134943 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 134889 Query: 660 actgctt 666 ||||||| Sbjct: 134888 actgctt 134882 Score = 965 bits (487), Expect = 0.0 Identities = 626/667 (93%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 105526 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 105584 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 105585 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 105643 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105644 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 105703 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105704 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 105763 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105764 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctga 105823 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 105824 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 105883 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105884 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105943 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105944 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106003 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106004 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 106060 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106061 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttg 106118 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 106119 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 106173 Query: 660 actgctt 666 ||||||| Sbjct: 106174 actgctt 106180
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 963 bits (486), Expect = 0.0 Identities = 489/490 (99%) Strand = Plus / Plus Query: 113 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 173 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 233 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 293 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 352 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 353 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 413 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 473 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 533 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 592 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 593 tggcttggtt 602 |||||||||| Sbjct: 481 tggcttggtt 490
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 963 bits (486), Expect = 0.0 Identities = 626/667 (93%), Gaps = 12/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 80 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 81 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 139 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140 gctgaatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagccagag 199 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 200 gaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaac 259 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 260 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaa 319 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 |||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 320 gtgccgaaccctagatggctagagtccagtagccgaaagcatcactagcttacgctctga 379 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 439 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 440 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 499 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 500 ccaccggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 556 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 tg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 615 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 616 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 670 Query: 660 actgctt 666 ||||||| Sbjct: 671 actgctt 677
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 961 bits (485), Expect = 0.0 Identities = 624/666 (93%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 106027 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 106085 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 106086 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 106144 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106145 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106204 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106205 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106264 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 106265 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 106324 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 106325 tgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 106384 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106385 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106444 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 106445 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 106504 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | Sbjct: 106505 catcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-ac 106560 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106561 gaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 106620 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| || |||| ||||||| Sbjct: 106621 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtca 106675 Query: 661 ctgctt 666 |||||| Sbjct: 106676 ctgctt 106681 Score = 912 bits (460), Expect = 0.0 Identities = 623/669 (93%), Gaps = 14/669 (2%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 135882 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 135824 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 135823 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 135765 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135764 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135705 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135704 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135645 Query: 241 gtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttga 299 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || || Sbjct: 135644 gtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtgga 135585 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctctg 358 ||| |||||||||||||| | |||||||||||||||||||||||||||||| | | ||| Sbjct: 135584 gtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgcccctg 135525 Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaag 417 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 135524 acccgagtagcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaag 135465 Query: 418 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 477 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 135464 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 135405 Query: 478 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 537 ||||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 135404 ccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag 135348 Query: 538 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 597 | | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135347 -acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 135289 Query: 598 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 657 |||||||| |||||||||||||||||||||||||||||||||| || |||| |||| Sbjct: 135288 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattg 135234 Query: 658 tcactgctt 666 ||||||||| Sbjct: 135233 tcactgctt 135225
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 961 bits (485), Expect = 0.0 Identities = 624/666 (93%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 136158 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 136100 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 136099 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 136041 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136040 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 135981 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135980 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 135921 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 135920 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 135861 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 135860 tgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 135801 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135800 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 135741 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 135740 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 135681 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | Sbjct: 135680 catcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-ac 135625 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135624 gaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 135565 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| || |||| ||||||| Sbjct: 135564 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtca 135510 Query: 661 ctgctt 666 |||||| Sbjct: 135509 ctgctt 135504 Score = 961 bits (485), Expect = 0.0 Identities = 624/666 (93%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 106249 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 106307 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 106308 ggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 106366 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106367 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 106426 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106427 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 106486 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct: 106487 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggag 106546 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 106547 tgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 106606 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106607 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106666 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 106667 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 106726 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | Sbjct: 106727 catcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-ac 106782 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106783 gaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 106842 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| || |||| ||||||| Sbjct: 106843 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgtca 106897 Query: 661 ctgctt 666 |||||| Sbjct: 106898 ctgctt 106903
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 954 bits (481), Expect = 0.0 Identities = 623/666 (93%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 131769 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 131711 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | | Sbjct: 131710 ggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-t 131652 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131651 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 131592 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131591 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 131532 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 131531 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggag 131472 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131471 tgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 131412 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131411 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 131352 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 131351 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 131292 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| | Sbjct: 131291 catcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggac 131235 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131234 caga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 131176 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 131175 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 131121 Query: 661 ctgctt 666 |||||| Sbjct: 131120 ctgctt 131115 Score = 954 bits (481), Expect = 0.0 Identities = 623/666 (93%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 101676 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 101734 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | | Sbjct: 101735 ggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-t 101793 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101794 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 101853 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101854 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 101913 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 101914 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggag 101973 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 101974 tgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 102033 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102034 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 102093 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102094 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 102153 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| | Sbjct: 102154 catcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggac 102210 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102211 caga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 102269 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 102270 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 102324 Query: 661 ctgctt 666 |||||| Sbjct: 102325 ctgctt 102330
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 950 bits (479), Expect = 0.0 Identities = 624/667 (93%), Gaps = 13/667 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 139482 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 139424 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 139423 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 139365 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 139364 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 139305 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139304 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 139245 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 139244 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 139185 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 139184 tgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgac 139125 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139124 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 139065 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 139064 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 139005 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaa 539 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 139004 cgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccc 138948 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138947 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 138890 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 138889 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 138835 Query: 660 actgctt 666 ||||||| Sbjct: 138834 actgctt 138828 Score = 950 bits (479), Expect = 0.0 Identities = 624/667 (93%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 109615 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 109673 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 109674 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 109732 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 109733 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 109792 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109793 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 109852 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 109853 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 109912 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 109913 tgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgac 109972 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109973 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 110032 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 110033 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 110092 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaa 539 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 110093 cgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccc 110149 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110150 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 110207 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 110208 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 110262 Query: 660 actgctt 666 ||||||| Sbjct: 110263 actgctt 110269
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 946 bits (477), Expect = 0.0 Identities = 625/669 (93%), Gaps = 13/669 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 139691 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 139633 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 139632 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 139574 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139573 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 139514 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139513 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 139454 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 139453 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcga 139394 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 139393 atgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctga 139334 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139333 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 139274 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 139273 taaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 139214 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga- 538 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 139213 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagac 139157 Query: 539 -aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 597 | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139156 tactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 139097 Query: 598 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 657 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 139096 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 139042 Query: 658 tcactgctt 666 ||||||||| Sbjct: 139041 tcactgctt 139033 Score = 946 bits (477), Expect = 0.0 Identities = 625/669 (93%), Gaps = 13/669 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 109608 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 109666 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 109667 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 109725 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109726 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 109785 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109786 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 109845 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-ga 299 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 109846 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcga 109905 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 109906 atgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctga 109965 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109966 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 110025 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| Sbjct: 110026 taaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 110085 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga- 538 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 110086 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagac 110142 Query: 539 -aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 597 | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110143 tactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 110202 Query: 598 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 657 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 110203 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 110257 Query: 658 tcactgctt 666 ||||||||| Sbjct: 110258 tcactgctt 110266
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 942 bits (475), Expect = 0.0 Identities = 621/663 (93%), Gaps = 14/663 (2%) Strand = Plus / Plus Query: 5 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 64 ||||||||||||||||| | |||||||||||||||| || |||||||||||||||||||| Sbjct: 1 gatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcggggag 59 Query: 65 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 124 |||||||||||||||||||||||||||||| |||||| |||||||| |||||| ||||| Sbjct: 60 ttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctg 118 Query: 125 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 184 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 178 Query: 185 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 238 Query: 245 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgc 303 ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 239 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgc 298 Query: 304 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 363 |||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 299 tgcaccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccg 357 Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 417 Query: 424 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 483 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 418 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 477 Query: 484 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 543 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 478 cggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg 534 Query: 544 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 603 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 592 Query: 604 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 663 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 593 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 647 Query: 664 ctt 666 ||| Sbjct: 648 ctt 650
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 940 bits (474), Expect = 0.0 Identities = 492/497 (98%), Gaps = 1/497 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 21 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 80 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 139 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 199 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 259 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 319 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 320 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgac 379 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 439 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 499 Query: 481 cagtgggtagtgaaata 497 ||||||||||||||||| Sbjct: 500 cagtgggtagtgaaata 516
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 938 bits (473), Expect = 0.0 Identities = 479/481 (99%) Strand = Plus / Plus Query: 186 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 246 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 306 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 365 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 366 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 426 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 486 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 420 Query: 606 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 665 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 421 ggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgct 480 Query: 666 t 666 | Sbjct: 481 t 481
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 934 bits (471), Expect = 0.0 Identities = 477/479 (99%) Strand = Plus / Plus Query: 188 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 248 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 308 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 367 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 368 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 428 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 488 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 608 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 479
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 934 bits (471), Expect = 0.0 Identities = 477/479 (99%) Strand = Plus / Plus Query: 188 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 248 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 308 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 367 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 368 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 428 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 488 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 547 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 607 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 608 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 479
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 932 bits (470), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 189 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 249 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 309 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 368 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 369 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 429 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 489 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 Query: 609 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 478
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 932 bits (470), Expect = 0.0 Identities = 476/478 (99%) Strand = Plus / Plus Query: 189 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 249 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 309 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 368 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 369 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 429 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 489 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 609 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 424 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 481
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 928 bits (468), Expect = 0.0 Identities = 474/476 (99%) Strand = Plus / Plus Query: 191 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 251 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 311 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 370 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 371 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 431 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 491 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 551 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 420 Query: 611 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 421 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 476
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 922 bits (465), Expect = 0.0 Identities = 615/662 (92%), Gaps = 10/662 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||||||||||||||||||||||||| ||| ||| |||||||| |||||| | Sbjct: 82 ggagctgaaaataagcatagatccggagattcccgaatgggttaaccttttgaactgc-t 140 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 200 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 260 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| Sbjct: 261 gtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgag 320 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | |||||||| |||||| | |||||||||||||||||||||||||||||| ||||| || Sbjct: 321 tcccgcaccccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaac 380 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 440 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 500 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 501 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaat 557 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 558 cggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctgg 617 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| || ||||||||||||||||||||||||||||||| | |||| ||||||| Sbjct: 618 ttaag-----gggacccaccggagccgtagcgaaagcgagtcttcctggggcaattgtca 672 Query: 661 ct 662 || Sbjct: 673 ct 674
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 918 bits (463), Expect = 0.0 Identities = 617/663 (93%), Gaps = 13/663 (1%) Strand = Plus / Minus Query: 5 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 64 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 142853 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 142795 Query: 65 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 124 |||||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 142794 ttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 142736 Query: 125 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 184 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142735 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 142676 Query: 185 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142675 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 142616 Query: 245 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgc 303 ||||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| Sbjct: 142615 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 142556 Query: 304 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 363 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 142555 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 142496 Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 142495 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 142436 Query: 424 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 483 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 142435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 142376 Query: 484 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 543 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | || | Sbjct: 142375 cggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg 142319 Query: 544 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 603 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 142261 Query: 604 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 663 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 142260 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 142206 Query: 664 ctt 666 ||| Sbjct: 142205 ctt 142203 Score = 918 bits (463), Expect = 0.0 Identities = 617/663 (93%), Gaps = 13/663 (1%) Strand = Plus / Plus Query: 5 gatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggag 64 ||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| Sbjct: 110475 gatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggggag 110533 Query: 65 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 124 |||||||||||| |||||||||||||||| ||| ||||||||||| |||||| ||||| Sbjct: 110534 ttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctg 110592 Query: 125 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 184 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110593 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 110652 Query: 185 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110653 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 110712 Query: 245 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgc 303 ||||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| Sbjct: 110713 aaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgc 110772 Query: 304 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 363 ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 110773 tgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccg 110832 Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110833 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaa 110892 Query: 424 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 483 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110893 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccat 110952 Query: 484 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 543 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | || | Sbjct: 110953 cggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg 111009 Query: 544 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 603 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 --ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 111067 Query: 604 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 663 || |||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 111068 ag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactg 111122 Query: 664 ctt 666 ||| Sbjct: 111123 ctt 111125
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 916 bits (462), Expect = 0.0 Identities = 618/666 (92%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4253 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4311 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4312 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4370 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4371 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4430 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4431 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 4490 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 4491 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaa 4550 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4551 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4610 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4611 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4670 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4671 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 4730 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 4731 tgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctg 4787 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4788 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 4845 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 4846 ttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtca 4900 Query: 661 ctgctt 666 |||||| Sbjct: 4901 ctgctt 4906
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 916 bits (462), Expect = 0.0 Identities = 618/666 (92%), Gaps = 12/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 23672 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 23614 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 23613 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 23555 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23554 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 23495 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 23494 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 23435 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 23434 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaa 23375 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23374 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 23315 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23314 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 23255 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 23254 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 23195 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 23194 tgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctg 23138 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23137 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 23080 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 23079 ttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtca 23025 Query: 661 ctgctt 666 |||||| Sbjct: 23024 ctgctt 23019
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 916 bits (462), Expect = 0.0 Identities = 619/666 (92%), Gaps = 13/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4580 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4581 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4639 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4699 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 4759 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4760 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaa 4819 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4879 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4880 ccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4939 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4940 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 4999 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 | ||| ||||||||||||| |||||||| | ||||||||| |||||||||| | Sbjct: 5000 tggcggggagtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctg 5055 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5056 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 5113 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 5114 ttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtca 5168 Query: 661 ctgctt 666 |||||| Sbjct: 5169 ctgctt 5174
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 916 bits (462), Expect = 0.0 Identities = 619/666 (92%), Gaps = 13/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 4580 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 4581 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 4639 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 4699 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 4759 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4760 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaa 4819 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4820 tgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgac 4879 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4880 ccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4939 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4940 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 4999 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 | ||| ||||||||||||| |||||||| | ||||||||| |||||||||| | Sbjct: 5000 tggcggggagtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctg 5055 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5056 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 5113 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||| ||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 5114 ttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtca 5168 Query: 661 ctgctt 666 |||||| Sbjct: 5169 ctgctt 5174
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 914 bits (461), Expect = 0.0 Identities = 624/669 (93%), Gaps = 16/669 (2%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || | |||||||||||||| Sbjct: 1789 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatc-acgaaatgcttcgg 1846 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 1847 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 1905 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1906 gctgaatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagag 1965 Query: 181 gaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1966 gaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 2025 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggtt 297 |||||||||||||||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 2026 cgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagccc 2085 Query: 298 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 357 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2086 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 2145 Query: 358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2146 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 2205 Query: 418 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 477 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2206 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 2265 Query: 478 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 537 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 2266 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 2322 Query: 538 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 597 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2323 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 2380 Query: 598 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 657 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2381 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 2435 Query: 658 tcactgctt 666 ||||||||| Sbjct: 2436 tcactgctt 2444
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 912 bits (460), Expect = 0.0 Identities = 619/667 (92%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 518 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 576 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | | Sbjct: 577 ggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-t 635 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 636 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 695 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 696 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 755 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 756 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggag 815 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 816 tgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgac 875 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 876 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 935 Query: 421 aaatactcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||| Sbjct: 936 aaatactcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaaccc 995 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||| || Sbjct: 996 ccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggagac 1052 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 ag---gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 1109 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1110 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 1164 Query: 660 actgctt 666 ||||||| Sbjct: 1165 actgctt 1171
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 904 bits (456), Expect = 0.0 Identities = 618/668 (92%), Gaps = 12/668 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||| Sbjct: 86284 ggtggatacctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcgg 86342 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||| ||||||||||||||||||||| ||||||| |||| ||| |||||| | Sbjct: 86343 ggagttgaaaatgagcatagatccggagattcccgaataggttaacccttttaactgc-t 86401 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86402 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 86461 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 86462 gaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaacc 86521 Query: 241 gtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttg 298 |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| Sbjct: 86522 gtgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttg 86581 Query: 299 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 358 ||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| Sbjct: 86582 agtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctcta 86641 Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86642 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 86701 Query: 419 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86702 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 86761 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 538 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 86762 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaa 86818 Query: 539 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 598 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 86819 attagatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggctt 86878 Query: 599 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 658 ||||||| ||||||||||||||||||||||| |||||||||| || |||| ||||| Sbjct: 86879 ggttaag-----ggaacccaccggagccgtagcgagagcgagtcttcatggggcaattgt 86933 Query: 659 cactgctt 666 |||||||| Sbjct: 86934 cactgctt 86941
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 904 bits (456), Expect = 0.0 Identities = 618/668 (92%), Gaps = 12/668 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||| Sbjct: 88370 ggtggatacctaggcacccagag-acgaggaagggcgtggtaagcgacgaaatgcttcgg 88428 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||| ||||||||||||||||||||| ||||||| |||||||| ||||| | Sbjct: 88429 ggagttgaaaattagcatagatccggagattcccgaataggttaacctttttcactgc-t 88487 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 88488 gctgaatccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagag 88547 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88548 gaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 88607 Query: 241 gtgaaaacggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttg 298 ||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 88608 gtgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttg 88667 Query: 299 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 358 ||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| Sbjct: 88668 agtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctcta 88727 Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88728 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 88787 Query: 419 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88788 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 88847 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 538 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 88848 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaa 88904 Query: 539 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 598 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 88905 attagatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggctt 88964 Query: 599 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 658 ||||||| ||||||||||||||||||||||| |||||||||| || |||| ||||| Sbjct: 88965 ggttaag-----ggaacccaccggagccgtagcgagagcgagtcttcatggggcaattgt 89019 Query: 659 cactgctt 666 |||||||| Sbjct: 89020 cactgctt 89027
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 900 bits (454), Expect = 0.0 Identities = 621/668 (92%), Gaps = 18/668 (2%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| || |||||||||||||||| Sbjct: 122 ggtggatacctaggcacccagag-acgaggaagggcgtagtaatcgacgaaatgcttcgg 180 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 181 ggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 239 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccaga 179 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 240 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccaga 299 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 359 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttg 298 |||||||||||| ||||||||||||||||||||||| |||||||||||||||| || | Sbjct: 360 cgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccg 418 Query: 299 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 358 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 419 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 478 Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 479 acccgagtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaagg 538 Query: 419 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 478 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 539 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-c 597 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 538 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 598 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggcca 654 Query: 539 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 598 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 ----gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 710 Query: 599 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 658 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 711 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 765 Query: 659 cactgctt 666 |||||||| Sbjct: 766 cactgctt 773
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 894 bits (451), Expect = 0.0 Identities = 615/666 (92%), Gaps = 13/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | | Sbjct: 89 ggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccc 507 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| || | Sbjct: 508 catcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagaca 564 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | |||||| ||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 565 g---gctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttgg 621 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 622 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtca 676 Query: 661 ctgctt 666 |||||| Sbjct: 677 ctgctt 682
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 884 bits (446), Expect = 0.0 Identities = 620/670 (92%), Gaps = 15/670 (2%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 131849 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 131791 Query: 61 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 119 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 131790 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 131732 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131731 tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 131672 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131671 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 131612 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 131611 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 131552 Query: 300 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 357 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 131551 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 131492 Query: 358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131491 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 131432 Query: 418 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 477 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 131431 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 131372 Query: 478 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-g 536 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 131371 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 131315 Query: 537 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 596 | | || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131314 gctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 131256 Query: 597 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 656 ||||||||| |||| ||||||||||||||||||||||||||||| | ||||| ||| Sbjct: 131255 ttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcacagggcaatt 131201 Query: 657 gtcactgctt 666 |||||||||| Sbjct: 131200 gtcactgctt 131191 Score = 884 bits (446), Expect = 0.0 Identities = 620/670 (92%), Gaps = 15/670 (2%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 103545 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 103603 Query: 61 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 119 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 103604 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 103662 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103663 tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 103722 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103723 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 103782 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 103783 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 103842 Query: 300 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 357 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 103843 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 103902 Query: 358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103903 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 103962 Query: 418 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 477 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 103963 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 104022 Query: 478 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-g 536 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104023 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 104079 Query: 537 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 596 | | || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104080 gctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 104138 Query: 597 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 656 ||||||||| |||| ||||||||||||||||||||||||||||| | ||||| ||| Sbjct: 104139 ttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcacagggcaatt 104193 Query: 657 gtcactgctt 666 |||||||||| Sbjct: 104194 gtcactgctt 104203
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 862 bits (435), Expect = 0.0 Identities = 613/667 (91%), Gaps = 13/667 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| Sbjct: 52664 ggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcgg 52606 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 52605 ggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-t 52547 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 52546 gctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagag 52487 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 52486 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 52427 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttga 299 | |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 52426 gcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttga 52367 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||||| Sbjct: 52366 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctga 52307 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52306 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 52247 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 52246 taaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaaccc 52187 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 52186 ccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 52130 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 52129 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttg 52072 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||| |||||||||||||| || ||||||| |||||| Sbjct: 52071 gttaag-----ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtc 52017 Query: 660 actgctt 666 ||||||| Sbjct: 52016 actgctt 52010 Score = 862 bits (435), Expect = 0.0 Identities = 613/667 (91%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| Sbjct: 37164 ggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcgg 37222 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 37223 ggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-t 37281 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 37282 gctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagag 37341 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 37342 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 37401 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttga 299 | |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 37402 gcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttga 37461 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||||| Sbjct: 37462 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctga 37521 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37522 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 37581 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 37582 taaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaaccc 37641 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 37642 ccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 37698 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 37699 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttg 37756 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||| |||||||||||||| || ||||||| |||||| Sbjct: 37757 gttaag-----ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtc 37811 Query: 660 actgctt 666 ||||||| Sbjct: 37812 actgctt 37818
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 862 bits (435), Expect = 0.0 Identities = 614/671 (91%), Gaps = 16/671 (2%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||||| Sbjct: 128424 ggtggatacctaggcactcagag-acgaggaagggcgtagcaatcgacgaaatgcttcgg 128366 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 128365 ggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 128307 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128306 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 128247 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 128246 gaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaacc 128187 Query: 241 gtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcg 294 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 128186 gtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcg 128127 Query: 295 gttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgc 354 ||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | || Sbjct: 128126 gttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgc 128067 Query: 355 tctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 414 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128066 tctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 128007 Query: 415 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 474 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 128006 aaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaag 127947 Query: 475 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 534 |||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| Sbjct: 127946 aacccccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggag 127890 Query: 535 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 594 | ||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 127889 gagaattggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtg 127830 Query: 595 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 654 || |||||||| |||||||||||||||||||||||||||||||||| |||||| | Sbjct: 127829 gcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaa 127775 Query: 655 ttgtcactgct 665 ||||||||||| Sbjct: 127774 ttgtcactgct 127764 Score = 862 bits (435), Expect = 0.0 Identities = 614/671 (91%), Gaps = 16/671 (2%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||||| Sbjct: 95023 ggtggatacctaggcactcagag-acgaggaagggcgtagcaatcgacgaaatgcttcgg 95081 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 95082 ggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 95140 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95141 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 95200 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 95201 gaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaacc 95260 Query: 241 gtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcg 294 ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||| Sbjct: 95261 gtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcg 95320 Query: 295 gttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgc 354 ||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | || Sbjct: 95321 gttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgc 95380 Query: 355 tctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 414 ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95381 tctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 95440 Query: 415 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 474 |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 95441 aaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaag 95500 Query: 475 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 534 |||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| Sbjct: 95501 aacccccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggag 95557 Query: 535 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 594 | ||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 95558 gagaattggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtg 95617 Query: 595 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 654 || |||||||| |||||||||||||||||||||||||||||||||| |||||| | Sbjct: 95618 gcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaa 95672 Query: 655 ttgtcactgct 665 ||||||||||| Sbjct: 95673 ttgtcactgct 95683
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 862 bits (435), Expect = 0.0 Identities = 613/667 (91%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| Sbjct: 4092 ggtggatacctaggcacccagag-acgaggaaggatgtagtaatcgacgaaatgcttcgg 4150 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| | Sbjct: 4151 ggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-t 4209 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4210 gctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagag 4269 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4270 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaacc 4329 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttga 299 | |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 4330 gcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttga 4389 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||||| Sbjct: 4390 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctga 4449 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4450 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 4509 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 4510 taaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaaccc 4569 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 4570 ccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 4626 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4627 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttg 4684 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||| |||||||||||||| || ||||||| |||||| Sbjct: 4685 gttaag-----ggaacccaccggagccatagcgaaagcgagtattcatagggcaattgtc 4739 Query: 660 actgctt 666 ||||||| Sbjct: 4740 actgctt 4746
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 858 bits (433), Expect = 0.0 Identities = 611/666 (91%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 116187 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 116129 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 116128 ggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-t 116070 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 116069 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 116010 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 116009 gaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaacc 115950 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| |||||| Sbjct: 115949 gtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgag 115891 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| || Sbjct: 115890 tcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaac 115831 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 115830 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 115771 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115770 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 115711 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 115710 catcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaat 115654 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 115653 tgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctgg 115594 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||| | ||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 115593 ttaagggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtca 115539 Query: 661 ctgctt 666 |||||| Sbjct: 115538 ctgctt 115533 Score = 858 bits (433), Expect = 0.0 Identities = 611/666 (91%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 85933 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 85991 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| | Sbjct: 85992 ggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-t 86050 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86051 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 86110 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 86111 gaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaacc 86170 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| |||||| Sbjct: 86171 gtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgag 86229 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| || Sbjct: 86230 tcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaac 86289 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 86290 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 86349 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86350 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 86409 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 86410 catcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaat 86466 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 86467 tgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctgg 86526 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||||| | ||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 86527 ttaagggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgtca 86581 Query: 661 ctgctt 666 |||||| Sbjct: 86582 ctgctt 86587
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 846 bits (427), Expect = 0.0 Identities = 617/667 (92%), Gaps = 24/667 (3%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 711 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 653 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||| ||| |||| || Sbjct: 652 ggagttgaaaataagcgtagatccggagattcccgaataggtca--ctt---gactg-ct 599 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||| || |||| ||| |||||||||||||||||| Sbjct: 598 gctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccagag 546 Query: 181 gaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 gaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 486 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct: 485 cgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtgga 426 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 425 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 366 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 306 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 305 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 246 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 245 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 189 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 188 cg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 130 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 129 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtc 75 Query: 660 actgctt 666 ||||||| Sbjct: 74 actgctt 68
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 844 bits (426), Expect = 0.0 Identities = 607/663 (91%), Gaps = 11/663 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 2066 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 2124 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 2125 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 2183 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2184 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 2243 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 2244 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 2303 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 2304 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 2363 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctga 359 | | ||||||||||||| | |||||||||||||||||||| || | || ||||||| | Sbjct: 2364 tcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaa 2423 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2424 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 2483 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2484 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 2543 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 2544 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaa 2600 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| || Sbjct: 2601 tcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctg 2660 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 2661 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtc 2715 Query: 660 act 662 ||| Sbjct: 2716 act 2718
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 844 bits (426), Expect = 0.0 Identities = 510/535 (95%), Gaps = 5/535 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct: 130513 ggtggatacctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcgg 130455 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | Sbjct: 130454 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-t 130396 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130395 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 130336 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130335 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 130276 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 130275 gtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggag 130216 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 130215 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 130156 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130155 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 130096 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 130095 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 130036 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 535 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130035 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 844 bits (426), Expect = 0.0 Identities = 510/535 (95%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| Sbjct: 101943 ggtggatacctaggcacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcgg 102001 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | | Sbjct: 102002 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-t 102060 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102061 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 102120 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102121 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 102180 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 102181 gtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggag 102240 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 102241 tgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgac 102300 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102301 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 102360 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 102361 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 102420 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 535 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102421 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 168 bits (85), Expect = 1e-38 Identities = 112/121 (92%), Gaps = 5/121 (4%) Strand = Plus / Minus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 606 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 665 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 666 t 666 | Sbjct: 129854 t 129854 Score = 168 bits (85), Expect = 1e-38 Identities = 112/121 (92%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 606 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 665 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 666 t 666 | Sbjct: 102602 t 102602
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 844 bits (426), Expect = 0.0 Identities = 607/663 (91%), Gaps = 11/663 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 118127 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 118069 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 118068 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 118010 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118009 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 117950 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 117949 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 117890 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 117889 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 117830 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctga 359 | | ||||||||||||| | |||||||||||||||||||| || | || ||||||| | Sbjct: 117829 tcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaa 117770 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 117769 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 117710 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 117709 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 117650 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 117649 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaa 117593 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| || Sbjct: 117592 tcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctg 117533 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 117532 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtc 117478 Query: 660 act 662 ||| Sbjct: 117477 act 117475 Score = 844 bits (426), Expect = 0.0 Identities = 607/663 (91%), Gaps = 11/663 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 89975 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 90033 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 90034 ggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-t 90092 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90093 gctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 90152 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 90153 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaacc 90212 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||| | ||| ||||| ||||||||||||| |||||| Sbjct: 90213 gtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgag 90272 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctga 359 | | ||||||||||||| | |||||||||||||||||||| || | || ||||||| | Sbjct: 90273 tcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaa 90332 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 90333 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 90392 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 90393 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 90452 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 90453 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaa 90509 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| || Sbjct: 90510 tcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctg 90569 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 90570 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtc 90624 Query: 660 act 662 ||| Sbjct: 90625 act 90627
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 842 bits (425), Expect = 0.0 Identities = 605/662 (91%), Gaps = 10/662 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 82 ggagctgaaaataagcatggatccggagattcccgaataggttaaccttttgaactgc-t 140 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 gctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagag 200 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaacc 260 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||| |||||| | |||||||| |||||||||||| ||||| Sbjct: 261 gtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaa 320 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | ||||| ||||||| | |||||||||||||||||||||||||| ||||||||| || Sbjct: 321 tcctgcaccatagatggtgagagtccagtagccgaaagcatcactagtttatgctctaac 380 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 381 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 440 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 500 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 501 cataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaat 557 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||| Sbjct: 558 cgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctgg 617 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 618 ttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtca 672 Query: 661 ct 662 || Sbjct: 673 ct 674
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 837 bits (422), Expect = 0.0 Identities = 609/667 (91%), Gaps = 11/667 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 146537 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 146479 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | | Sbjct: 146478 ggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-t 146420 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 146419 gctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagag 146360 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 146359 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 146300 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| Sbjct: 146299 gtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgag 146240 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctga 359 | | | ||||||||||| | |||||||||||||||||||||||| || |||||||| | Sbjct: 146239 tcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaa 146180 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 146179 cccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggc 146120 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 146119 taaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaaccc 146060 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 || ||| ||||||||||||| |||||||| | ||||||||||||||||||| ||| Sbjct: 146059 ccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaa 146003 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 146002 tcggatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 145943 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 145942 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtc 145888 Query: 660 actgctt 666 ||||||| Sbjct: 145887 actgctt 145881 Score = 837 bits (422), Expect = 0.0 Identities = 609/667 (91%), Gaps = 11/667 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 111925 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 111983 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | | Sbjct: 111984 ggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-t 112042 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 112043 gctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagag 112102 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112103 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 112162 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||| Sbjct: 112163 gtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgag 112222 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctga 359 | | | ||||||||||| | |||||||||||||||||||||||| || |||||||| | Sbjct: 112223 tcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaa 112282 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 112283 cccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggc 112342 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 112343 taaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaaccc 112402 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 || ||| ||||||||||||| |||||||| | ||||||||||||||||||| ||| Sbjct: 112403 ccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaa 112459 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||| |||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 112460 tcggatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 112519 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 112520 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtc 112574 Query: 660 actgctt 666 ||||||| Sbjct: 112575 actgctt 112581
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 837 bits (422), Expect = 0.0 Identities = 509/535 (95%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccc 507 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 535 || ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 508 catcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%), Gaps = 5/87 (5%) Strand = Plus / Plus Query: 580 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 639 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 640 gtcttaatagggcgattgtcactgctt 666 ||||| ||||||| ||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgctt 673
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 837 bits (422), Expect = 0.0 Identities = 509/535 (95%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacccc 507 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 535 || || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 508 catccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 153 bits (77), Expect = 9e-34 Identities = 110/121 (90%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 606 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 665 |||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 -----ggaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 666 t 666 | Sbjct: 696 t 696
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 837 bits (422), Expect = 0.0 Identities = 608/666 (91%), Gaps = 7/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 6 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 64 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| | Sbjct: 65 ggagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactgc-t 123 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124 gctgaatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggag 183 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 184 gaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaacc 243 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||| |||| | | |||| |||| ||||||||||||| |||||| Sbjct: 244 gtgaaaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgag 303 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | ||||||||||||| | ||||||||| |||||||||| || ||||| ||||| || Sbjct: 304 tcctgcaccctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaac 363 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 ccgagtaacatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 423 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 483 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| |||||||| | |||| ||||||||||||||| ||| Sbjct: 484 catcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggagaat 540 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 541 cggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctgg 600 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||||| | | ||||||||||| ||||||||||||||||| ||||| ||||||| Sbjct: 601 ttaagggaaag--aaccaccggagccatagcgaaagcgagtcttcccagggcaattgtca 658 Query: 661 ctgctt 666 |||||| Sbjct: 659 ctgctt 664
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 835 bits (421), Expect = 0.0 Identities = 607/666 (91%), Gaps = 10/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 3912 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 3970 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 3971 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 4029 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 4030 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 4089 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4090 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 4149 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 4150 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 4209 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 4210 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 4269 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4270 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4329 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4330 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 4389 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 4390 catcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaat 4446 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 4447 cggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctgg 4506 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||| |||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 4507 ttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtca 4561 Query: 661 ctgctt 666 |||||| Sbjct: 4562 ctgctt 4567
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 835 bits (421), Expect = 0.0 Identities = 607/666 (91%), Gaps = 10/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 80 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 81 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 139 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 140 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 199 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 200 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 259 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 260 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 319 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 320 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 379 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 439 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 499 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 500 catcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaat 556 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 557 cggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctgg 616 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||| |||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 617 ttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtca 671 Query: 661 ctgctt 666 |||||| Sbjct: 672 ctgctt 677
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 835 bits (421), Expect = 0.0 Identities = 607/666 (91%), Gaps = 10/666 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 151223 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 151165 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 151164 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 151106 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 151105 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 151046 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 151045 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 150986 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 150985 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 150926 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 150925 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 150866 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150865 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 150806 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150805 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 150746 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 150745 catcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaat 150689 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 150688 cggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctgg 150629 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||| |||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 150628 ttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtca 150574 Query: 661 ctgctt 666 |||||| Sbjct: 150573 ctgctt 150568 Score = 835 bits (421), Expect = 0.0 Identities = 607/666 (91%), Gaps = 10/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 117443 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 117501 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 117502 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 117560 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 117561 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 117620 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 117621 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 117680 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 117681 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 117740 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 117741 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 117800 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117801 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 117860 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117861 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 117920 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 117921 catcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaat 117977 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 117978 cggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctgg 118037 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||| |||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 118038 ttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtca 118092 Query: 661 ctgctt 666 |||||| Sbjct: 118093 ctgctt 118098
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 835 bits (421), Expect = 0.0 Identities = 607/666 (91%), Gaps = 10/666 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 80 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 81 ggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-t 139 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 140 gctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagag 199 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 200 gaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaacc 259 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||| Sbjct: 260 gtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgag 319 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | | |||||| |||||| | ||||||||||||||||||| |||| |||| || | || Sbjct: 320 ttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaac 379 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 439 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 499 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 500 catcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaat 556 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 557 cggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctgg 616 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||| |||| |||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 617 ttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgtca 671 Query: 661 ctgctt 666 |||||| Sbjct: 672 ctgctt 677
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 833 bits (420), Expect = 0.0 Identities = 610/670 (91%), Gaps = 14/670 (2%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||||||| || ||||||||||||||| ||||||| ||||||||||||||| | Sbjct: 82 ggagctgaaaataagtatggatccggagattcccgaataggttaaccttttaaactgc-t 140 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| || |||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 141 gctgaattcataggcgggcaagagacaacccggcgaactgaaacatcttagtagccggag 200 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 201 gaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaacc 260 Query: 241 gtgaaaacggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggt 296 ||||||||||||||||||| |||| |||||| || ||| ||||||||||||||| || Sbjct: 261 gtgaaaacggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagt 320 Query: 297 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 356 ||||| | |||||| |||||| | ||||||||| |||||||||| || | ||||||||| Sbjct: 321 tgagtcctgcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgctc 380 Query: 357 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 416 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 taacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 440 Query: 417 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 500 Query: 477 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 536 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 501 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 557 Query: 537 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 596 ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 558 gaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 617 Query: 597 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 656 |||||||| ||||||||||||||||||||||||||| |||||| | |||| ||| Sbjct: 618 ctggttaag-----ggaacccaccggagccgtagcgaaagcaagtcttcctggggcaatt 672 Query: 657 gtcactgctt 666 |||||||||| Sbjct: 673 gtcactgctt 682
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 829 bits (418), Expect = 0.0 Identities = 508/535 (94%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| |||||||||| || |||||||||||||||| Sbjct: 46274 ggtggatacctaggcacccagag-acgaagaagggcgtattaatcgacgaaatgcttcgg 46332 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 46333 ggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-t 46391 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 46392 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagag 46451 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 46452 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 46511 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 46512 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 46571 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 46572 taccgcaccctagatggctagagtccagtagccgaaagcatcactagcttatgctctgac 46631 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46632 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 46691 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 46692 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 46751 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 535 || ||| ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46752 catcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 184 bits (93), Expect = 2e-43 Identities = 114/121 (94%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 606 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 665 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 666 t 666 | Sbjct: 46933 t 46933
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 829 bits (418), Expect = 0.0 Identities = 508/535 (94%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccc 507 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 535 || || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 508 catccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 119 bits (60), Expect = 1e-23 Identities = 107/121 (88%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 606 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 665 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 666 t 666 | Sbjct: 696 t 696
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 829 bits (418), Expect = 0.0 Identities = 508/535 (94%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccc 507 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 535 || ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 508 catcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 121 bits (61), Expect = 3e-24 Identities = 107/121 (88%), Gaps = 6/121 (4%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 606 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 665 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 666 t 666 | Sbjct: 695 t 695
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 829 bits (418), Expect = 0.0 Identities = 508/535 (94%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 || ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| | Sbjct: 89 ggggttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||||||||||| | ||||||||||||||||||||| |||||||| |||||||| Sbjct: 328 tgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacccc 507 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 535 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 508 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 131 bits (66), Expect = 3e-27 Identities = 110/122 (90%), Gaps = 7/122 (5%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 606 ggaacggaacccaccgg-agccgtagcgaaagcgagtcttaatagggcgattgtcactgc 664 |||||||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 -----ggaacccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 665 tt 666 || Sbjct: 695 tt 696
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 68 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 127 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 128 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 188 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 248 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 307 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 308 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 367 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 368 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 428 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 488 tagtga 493 |||||| Sbjct: 421 tagtga 426
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 815 bits (411), Expect = 0.0 Identities = 537/574 (93%), Gaps = 8/574 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 71 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 129 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| | Sbjct: 130 ggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-t 188 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 189 gctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggag 248 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 308 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 309 gtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaag 368 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 369 tgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgac 428 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 488 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 489 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 548 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaa 539 | ||| ||||||||||||| |||||||| | ||||||||||||| |||||| | Sbjct: 549 cgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagccc 605 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatga 573 || | |||||||||||||||||||||||||||| Sbjct: 606 aggg--ctctgaccgcgtgcctgttgaagaatga 637
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 809 bits (408), Expect = 0.0 Identities = 453/469 (96%), Gaps = 13/469 (2%) Strand = Plus / Minus Query: 203 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 263 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 383 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 438 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 498 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 557 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 558 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 617 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 75067 Query: 618 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 75066 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 75018 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 75690 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 75632 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 75631 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 75572 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75571 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 75512 Query: 181 gaaaagaaagcaaaagcgattcccgta 207 ||||||||||||||||||||||||||| Sbjct: 75511 gaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 134 gcaggcaagagacaacctggcgaactgaaacatcttagta 173 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 809 bits (408), Expect = 0.0 Identities = 453/469 (96%), Gaps = 13/469 (2%) Strand = Plus / Plus Query: 203 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 263 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 383 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 438 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 498 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 557 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 558 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 617 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 382471 Query: 618 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 382472 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 382520 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 381848 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 381906 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 381907 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 381966 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381967 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 382026 Query: 181 gaaaagaaagcaaaagcgattcccgta 207 ||||||||||||||||||||||||||| Sbjct: 382027 gaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 134 gcaggcaagagacaacctggcgaactgaaacatcttagta 173 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 134 gcaggcaagagacaacctggcgaactgaaacatcttagta 173 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 809 bits (408), Expect = 0.0 Identities = 453/469 (96%), Gaps = 13/469 (2%) Strand = Plus / Minus Query: 203 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 263 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 383 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 438 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 498 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 557 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 558 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 617 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 113158 Query: 618 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 113157 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 113109 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 113781 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 113723 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 113722 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 113663 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113662 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 113603 Query: 181 gaaaagaaagcaaaagcgattcccgta 207 ||||||||||||||||||||||||||| Sbjct: 113602 gaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 134 gcaggcaagagacaacctggcgaactgaaacatcttagta 173 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 809 bits (408), Expect = 0.0 Identities = 453/469 (96%), Gaps = 13/469 (2%) Strand = Plus / Minus Query: 203 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 263 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 383 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 438 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 498 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 557 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 558 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 617 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 367840 Query: 618 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 367839 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 367791 Score = 809 bits (408), Expect = 0.0 Identities = 453/469 (96%), Gaps = 13/469 (2%) Strand = Plus / Minus Query: 203 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 263 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 383 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 438 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 498 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 557 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 558 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 617 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 184445 Query: 618 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 184444 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 184396 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 368463 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 368405 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 368404 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 368345 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368344 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 368285 Query: 181 gaaaagaaagcaaaagcgattcccgta 207 ||||||||||||||||||||||||||| Sbjct: 368284 gaaaagaaagcaaaagcgattcccgta 368258 Score = 381 bits (192), Expect = e-102 Identities = 204/207 (98%), Gaps = 1/207 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 185068 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 185010 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 185009 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 184950 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184949 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184890 Query: 181 gaaaagaaagcaaaagcgattcccgta 207 ||||||||||||||||||||||||||| Sbjct: 184889 gaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 134 gcaggcaagagacaacctggcgaactgaaacatcttagta 173 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 763 bits (385), Expect = 0.0 Identities = 488/518 (94%), Gaps = 7/518 (1%) Strand = Plus / Minus Query: 84 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 143 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 144 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 204 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 264 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 322 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 383 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 442 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 443 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 502 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 503 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 562 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 563 ttgaagaatgagccggcgactcataggcagtggcttgg 600 |||||||||||||||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcataggcagtggcttgg 1
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 761 bits (384), Expect = 0.0 Identities = 505/541 (93%), Gaps = 6/541 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||||||||||| || |||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgaggaagggcgtattaatcgacgaaatgcttcgg 88 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | | Sbjct: 89 ggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-t 147 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 148 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 207 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 208 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 267 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||||||||||||||||||||||||||||||||| ||||||||||||||| | || ||| Sbjct: 268 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggag 327 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 328 tgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgac 387 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 447 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 448 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-ccc 506 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 || ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| |||| Sbjct: 507 catcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagaaa 563 Query: 541 g 541 | Sbjct: 564 g 564 Score = 95.6 bits (48), Expect = 2e-16 Identities = 54/56 (96%) Strand = Plus / Plus Query: 611 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctt 657
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 755 bits (381), Expect = 0.0 Identities = 462/486 (95%), Gaps = 6/486 (1%) Strand = Plus / Plus Query: 119 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 178 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 179 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 239 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 297 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 298 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 357 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 418 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 477 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 478 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 537 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 538 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 597 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 598 tggtta 603 |||||| Sbjct: 492 tggtta 497
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 745 bits (376), Expect = 0.0 Identities = 456/478 (95%), Gaps = 5/478 (1%) Strand = Plus / Plus Query: 4 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 63 |||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||| Sbjct: 22 ggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgggga 80 Query: 64 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 123 ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| |||| Sbjct: 81 gttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgct 139 Query: 124 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 183 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 199 Query: 184 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 259 Query: 244 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 303 |||||||||||||||||||||||||||||||| |||||||||||||||||||| || | | Sbjct: 260 aaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatac 319 Query: 304 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 363 |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 320 tgcaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccg 379 Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 439 Query: 424 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 481 |||| | |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 440 tactac--ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494 Score = 89.7 bits (45), Expect = 1e-14 Identities = 74/82 (90%), Gaps = 5/82 (6%) Strand = Plus / Plus Query: 586 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 644 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 645 aatagggcgattgtcactgctt 666 ||||||| ||||||||||||| Sbjct: 669 catagggcaattgtcactgctt 690
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 743 bits (375), Expect = 0.0 Identities = 599/667 (89%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | ||||||||||| |||| || |||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgaggaagggtgtagtaatcgacgaaatgcttcgg 80 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||| |||||||| ||| || ||||||| | ||||| | Sbjct: 81 ggagttgaaaataagcatagatccgtagattcccgaatggggtaacctttcacactgc-t 139 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccagag 199 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 200 gaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaacc 259 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 | |||||||||||||||||||||||||| |||||| ||||||||||||||||| | || | Sbjct: 260 gcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaa 319 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 || |||||||||||||| |||||||||||| | |||||||||||| || ||||||| Sbjct: 320 atgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctga 379 Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 380 cccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggc 439 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| || Sbjct: 440 taaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-cc 498 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| |||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 499 ccattggggagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagcc 555 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 || | ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 556 aggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttg 613 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 659 |||||| |||||||||||||||| |||||||||||||| || ||||| | |||||| Sbjct: 614 gttaag-----ggaacccaccggagccatagcgaaagcgagtattcataggactattgtc 668 Query: 660 actgctt 666 ||||||| Sbjct: 669 actgctt 675
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 741 bits (374), Expect = 0.0 Identities = 447/469 (95%), Gaps = 2/469 (0%) Strand = Plus / Plus Query: 3 tggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggg 62 ||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||||| Sbjct: 1 tggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgggg 59 Query: 63 agttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 122 |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 60 agttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgc 118 Query: 123 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 182 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 119 cgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagga 178 Query: 183 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 238 Query: 243 gaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtg 302 ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 239 gaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaaca 298 Query: 303 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 362 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 299 ccgcaccctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgaccc 358 Query: 363 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 418 Query: 423 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 471 |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 419 atactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 77 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 136 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 137 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 197 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 257 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 317 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 376 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 377 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 437 ccgata 442 |||||| Sbjct: 361 ccgata 366
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 696 bits (351), Expect = 0.0 Identities = 378/386 (97%), Gaps = 1/386 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 123448 ggtggatacctaggtacccagag-atgaggaagggcgtagcaagcgacgaaatgcttcgg 123390 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123389 ggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcct 123330 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123329 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 123270 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123269 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 123210 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123209 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 123150 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 123149 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgcc 123090 Query: 361 ccgagtagcatggggcacgtggaatc 386 |||||||||||||||||||||||||| Sbjct: 123089 ccgagtagcatggggcacgtggaatc 123064 Score = 539 bits (272), Expect = e-150 Identities = 287/291 (98%), Gaps = 2/291 (0%) Strand = Plus / Minus Query: 378 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 438 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 498 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 558 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 615 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 616 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 122530
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 696 bits (351), Expect = 0.0 Identities = 378/386 (97%), Gaps = 1/386 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | | |||||||||||||||||||||||||||||||||| Sbjct: 12825989 ggtggatacctaggtacccagag-atgaggaagggcgtagcaagcgacgaaatgcttcgg 12825931 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 12825930 ggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcct 12825871 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825870 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 12825811 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825810 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 12825751 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825750 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 12825691 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 12825690 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgcc 12825631 Query: 361 ccgagtagcatggggcacgtggaatc 386 |||||||||||||||||||||||||| Sbjct: 12825630 ccgagtagcatggggcacgtggaatc 12825605 Score = 539 bits (272), Expect = e-150 Identities = 287/291 (98%), Gaps = 2/291 (0%) Strand = Plus / Minus Query: 378 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 438 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 498 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 557 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 558 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 615 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 616 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 12825071 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 323 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 382 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 678 bits (342), Expect = 0.0 Identities = 348/350 (99%) Strand = Plus / Plus Query: 317 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 376 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 377 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 437 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 497 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 557 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 300 Query: 617 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 301 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 350
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 579 bits (292), Expect = e-162 Identities = 298/300 (99%) Strand = Plus / Plus Query: 367 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 427 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 487 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 546 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 547 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 607 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 300
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 565 bits (285), Expect = e-158 Identities = 574/666 (86%), Gaps = 6/666 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||| |||| |||||||||||||||| Sbjct: 143941 ggtggatacctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcgg 143999 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||| | |||||||||||||||||| ||||||| |||||| ||||||||| Sbjct: 144000 ggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcct 144059 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 144060 gctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggag 144119 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 || | |||||||||||||||||| ||||| ||||||| |||| |||| |||||||||| Sbjct: 144120 gaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaacc 144179 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||| ||||||||||||||||| || || | || | ||||||||||| |||||| Sbjct: 144180 gtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgag 144239 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||| |||||| | ||||||||||||| ||| | |||||| | |||| || Sbjct: 144240 tgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaac 144299 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 || |||||||||||||||| |||||||||||||||||| |||||||||||| |||||| Sbjct: 144300 ccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggct 144359 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 144360 aaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccc 144419 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 | ||| ||||||||||||| |||||||| ||||||||||||||||||||| ||| Sbjct: 144420 cgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaat 144476 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| || Sbjct: 144477 gagatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccgg 144536 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||| |||||| |||||||||||||||||||||||||| | |||| ||||||| Sbjct: 144537 ttaaggg-ggagaaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtca 144594 Query: 661 ctgctt 666 | |||| Sbjct: 144595 ccgctt 144600 Score = 565 bits (285), Expect = e-158 Identities = 574/666 (86%), Gaps = 6/666 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||| |||| |||||||||||||||| Sbjct: 88910 ggtggatacctaggcacccagag-acgaagaagggcgtggcaaacgacgaaatgcttcgg 88852 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||||||| | |||||||||||||||||| ||||||| |||||| ||||||||| Sbjct: 88851 ggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcct 88792 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 88791 gctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggag 88732 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 || | |||||||||||||||||| ||||| ||||||| |||| |||| |||||||||| Sbjct: 88731 gaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaacc 88672 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 300 ||||| ||||||||||||||||| || || | || | ||||||||||| |||||| Sbjct: 88671 gtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgag 88612 Query: 301 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 360 ||| |||||| |||||| | ||||||||||||| ||| | |||||| | |||| || Sbjct: 88611 tgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaac 88552 Query: 361 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 420 || |||||||||||||||| |||||||||||||||||| |||||||||||| |||||| Sbjct: 88551 ccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggct 88492 Query: 421 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 ||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 88491 aaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaacccc 88432 Query: 481 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 540 | ||| ||||||||||||| |||||||| ||||||||||||||||||||| ||| Sbjct: 88431 cgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaat 88375 Query: 541 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttgg 600 | ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| || Sbjct: 88374 gagatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccgg 88315 Query: 601 ttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 ||||||| |||||| |||||||||||||||||||||||||| | |||| ||||||| Sbjct: 88314 ttaaggg-ggagaaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattgtca 88257 Query: 661 ctgctt 666 | |||| Sbjct: 88256 ccgctt 88251
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 104 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 163 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 164 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 224 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 283 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 284 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 343 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 344 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 403 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 404 gaccaccttgcaaggctaaatactcctgggtg 435 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 555 bits (280), Expect = e-155 Identities = 283/284 (99%) Strand = Plus / Plus Query: 383 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 443 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 503 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 563 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 622 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 623 agccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgctt 284
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 545 bits (275), Expect = e-152 Identities = 377/405 (93%), Gaps = 6/405 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 2621 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 2679 Query: 61 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 119 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 2680 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 2738 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 2739 tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccaga 2798 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2799 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 2858 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 2859 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 2918 Query: 300 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 357 | ||| |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 2919 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctct 2977 Query: 358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 402 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2978 gacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 545 bits (275), Expect = e-152 Identities = 377/405 (93%), Gaps = 6/405 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 876 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 934 Query: 61 ggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcc 119 |||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 935 ggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc- 993 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 994 tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccaga 1053 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 1113 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 ||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | || Sbjct: 1114 cgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcaga 1173 Query: 300 g--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 357 | ||| |||||||||||||| | |||||||||||||||||||||||| ||||| ||||| Sbjct: 1174 gaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctct 1232 Query: 358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 402 |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1233 gacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 507 bits (256), Expect = e-140 Identities = 271/275 (98%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 138 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgt 275 ||||||||||||||||||||||||||||||||||| Sbjct: 259 gtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 507 bits (256), Expect = e-140 Identities = 271/275 (98%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 78 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 79 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 138 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 198 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 258 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgt 275 ||||||||||||||||||||||||||||||||||| Sbjct: 259 gtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 502 bits (253), Expect = e-139 Identities = 556/652 (85%), Gaps = 24/652 (3%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||||||| | |||||||||||||||||| ||||| |||||||||| Sbjct: 139247 ggtggatacctaggcacccaaag-acgaggaagggcgtagcaggcgac--aatgcttcgg 139191 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 139190 gaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc- 139132 Query: 121 gctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagcc 176 ||||||||| | || |||||||| ||| ||||||| |||||||| | ||||| Sbjct: 139131 ---gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagcc 139075 Query: 177 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 236 | |||| |||| |||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 139074 gggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagccta 139015 Query: 237 aaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaag 292 ||||||| ||||||||||||||||||| ||| ||| ||||||||| |||| |||| Sbjct: 139014 aaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaag 138956 Query: 293 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 352 |||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| Sbjct: 138955 cggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggcttac 138896 Query: 353 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 412 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 138895 gctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctc 138836 Query: 413 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 472 | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 138835 gtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaa 138776 Query: 473 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 532 |||||||||| ||| ||||||||||||| |||||||| | ||||||| ||||||||| Sbjct: 138775 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccgagcagtggg 138719 Query: 533 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 592 ||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 138718 aggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcgg 138659 Query: 593 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 644 ||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 138658 cggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 138612 Score = 502 bits (253), Expect = e-139 Identities = 556/652 (85%), Gaps = 24/652 (3%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||||||| | |||||||||||||||||| ||||| |||||||||| Sbjct: 82630 ggtggatacctaggcacccaaag-acgaggaagggcgtagcaggcgac--aatgcttcgg 82686 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 82687 gaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc- 82745 Query: 121 gctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagcc 176 ||||||||| | || |||||||| ||| ||||||| |||||||| | ||||| Sbjct: 82746 ---gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagcc 82802 Query: 177 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 236 | |||| |||| |||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct: 82803 gggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagccta 82862 Query: 237 aaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaag 292 ||||||| ||||||||||||||||||| ||| ||| ||||||||| |||| |||| Sbjct: 82863 aaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaag 82921 Query: 293 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 352 |||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| Sbjct: 82922 cggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggcttac 82981 Query: 353 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 412 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 82982 gctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctc 83041 Query: 413 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 472 | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 83042 gtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaa 83101 Query: 473 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 532 |||||||||| ||| ||||||||||||| |||||||| | ||||||| ||||||||| Sbjct: 83102 agaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccgagcagtggg 83158 Query: 533 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 592 ||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 83159 aggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcgg 83218 Query: 593 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 644 ||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 83219 cggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 83265
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 494 bits (249), Expect = e-136 Identities = 380/423 (89%), Gaps = 8/423 (1%) Strand = Plus / Minus Query: 244 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 303 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 304 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 363 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 424 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 483 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 484 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 543 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 544 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 603 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 604 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 663 || || |||||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 ag-----ggcacccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 664 ctt 666 ||| Sbjct: 5872 ctt 5870 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 43 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 102 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 103 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 162 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 163 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 222 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 223 atgggagcagcctaaaccgt 242 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 482 bits (243), Expect = e-133 Identities = 335/362 (92%), Gaps = 3/362 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | | |||||||||||||| || |||||||||||||||| Sbjct: 177053 ggtggatacctaggcacccagag-aggaggaagggcgtagtaatcgacgaaatgcttcgg 177111 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 177112 ggagttgaaaatcagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 177170 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 |||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||| Sbjct: 177171 gctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccagag 177230 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 177231 gaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaacc 177290 Query: 241 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 299 ||||||||||||||||||||||||||||||||||| |||| |||||||||||| | || Sbjct: 177291 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccga 177350 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 177351 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctctga 177410 Query: 360 cc 361 || Sbjct: 177411 cc 177412 Score = 184 bits (93), Expect = 2e-43 Identities = 114/121 (94%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 606 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 665 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 666 t 666 | Sbjct: 177520 t 177520 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 153 gcgaactgaaacatcttagtagc 175 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 153 gcgaactgaaacatcttagtagc 175 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 320 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 379 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 380 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 440 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 499 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 500 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 559 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 560 ctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 99 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 158 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 159 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 218 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 219 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 278 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 279 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 338 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 339 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 398 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 399 gcaaggaccaccttgcaag 417 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 129 bits (65), Expect = 1e-26 Identities = 107/121 (88%), Gaps = 5/121 (4%) Strand = Plus / Minus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 606 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 665 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 666 t 666 | Sbjct: 3134 t 3134 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 426 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 485 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 486 ggtagtgaaatagaacgtgaaacc 509 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 81.8 bits (41), Expect = 3e-12 Identities = 77/88 (87%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||| |||||||| | |||||||||||| ||| |||||||||||||||| | Sbjct: 3780 ggtggatacctatgcacccagag-acgaggaagggcatagttagcgacgaaatgcttcag 3722 Query: 61 ggagttgaaaataagcatagatccggag 88 |||||| |||||||| |||||| |||| Sbjct: 3721 agagttgcaaataagcgtagatcaggag 3694
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 196 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 255 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 256 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 314 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 315 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 374 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 375 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 434 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 435 gaccgata 442 |||||||| Sbjct: 241 gaccgata 248
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 402 bits (203), Expect = e-109 Identities = 246/258 (95%), Gaps = 2/258 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| Sbjct: 79748 ggtggatacctaggcacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcgg 79690 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| | Sbjct: 79689 ggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-t 79631 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79630 gctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 79571 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 79570 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaacc 79511 Query: 241 gtgaaaacggggttgtgg 258 |||||||||||||||||| Sbjct: 79510 gtgaaaacggggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 392 bits (198), Expect = e-106 Identities = 210/213 (98%), Gaps = 1/213 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 75788 ggtggatacctaggcacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 75846 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75847 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 75906 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75907 gcggaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 75966 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcg 213 ||||||||||||||||||||||||||||||||| Sbjct: 75967 gaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 480 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 152 ggcgaactgaaacatcttag 171 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 379 bits (191), Expect = e-102 Identities = 547/653 (83%), Gaps = 21/653 (3%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | | || ||||||| || || || ||||||||| || Sbjct: 21 ggtggatacctaggcacccaggg-atgaagaagggcataataattgatgaaatgctttgg 79 Query: 61 ggagttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 |||||| |||| ||| ||||||||||||||||||| ||||||| ||||||| |||||| Sbjct: 80 ggagttaaaaaataaacatagatccggagattcccgaataggtaaaccttt--aactgc- 136 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 |||| | |||||| |||| ||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 137 tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccaga 194 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 |||||| |||||||||| |||||| |||||| ||| | |||| |||| ||||||||| Sbjct: 195 ggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaat 254 Query: 240 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 299 || |||| ||||||| || ||||||| ||| || || |||||| || || || || Sbjct: 255 cgctaaaatggggttgggg---agcaataaaagtattttgttgctagacggagtagtgga 311 Query: 300 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 359 || | | ||||||||||| | |||||||||| |||| |||| ||||||||||| | | Sbjct: 312 gttctgaaccctagatggtgagagtccagtagtataaagtatcattagcttatgctttta 371 Query: 360 -cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 ||||||||||||||| || |||||||||||||||||||||||||||||||||| |||| Sbjct: 372 acccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaagg 431 Query: 419 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 478 |||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||| Sbjct: 432 ctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacc 491 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 538 |||| |||| |||||| |||||| ||||| | | ||| ||||||||||||||| || Sbjct: 492 cccattggggagtgaactagaacatgaaaac---atatgctaccaagcagtgggaggaga 548 Query: 539 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 598 || | |||||||| |||||| ||||||||||||| |||||||||||| | |||||| | Sbjct: 549 caggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcct 606 Query: 599 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaataggg 651 |||||||| |||| ||||||||||| |||||||||| |||||| |||||| Sbjct: 607 ggttaagg----ggaa-ccaccggagccatagcgaaagcaagtcttcataggg 654
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 305 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 364 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 365 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 424 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 425 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 484 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 485 gggtagtgaaatagaacgtgaaaccgt 511 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 343 bits (173), Expect = 5e-91 Identities = 276/308 (89%), Gaps = 8/308 (2%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 419 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 478 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 538 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 539 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 598 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 599 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 658 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 615 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 669 Query: 659 cactgctt 666 |||||||| Sbjct: 670 cactgctt 677 Score = 280 bits (141), Expect = 6e-72 Identities = 217/242 (89%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| |||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 68 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 69 ggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 128 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 188 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 189 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 248 Query: 241 gt 242 || Sbjct: 249 gt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 343 bits (173), Expect = 5e-91 Identities = 276/308 (89%), Gaps = 8/308 (2%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 419 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 478 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 538 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 539 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 598 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 599 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 658 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 628 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 682 Query: 659 cactgctt 666 |||||||| Sbjct: 683 cactgctt 690 Score = 291 bits (147), Expect = 1e-75 Identities = 219/242 (90%), Gaps = 1/242 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 82 ggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 141 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 201 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 261 Query: 241 gt 242 || Sbjct: 262 gt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 337 bits (170), Expect = 3e-89 Identities = 276/308 (89%), Gaps = 10/308 (3%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 600 gttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 658 ||||||| || ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 733 gttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 786 Query: 659 cactgctt 666 |||||||| Sbjct: 787 cactgctt 794 Score = 281 bits (142), Expect = 1e-72 Identities = 217/241 (90%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||| Sbjct: 127 ggtggatacctaggcacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcgg 185 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || ||| || |||||| ||||||||||| ||| |||||| ||||| || ||||||| Sbjct: 186 gaagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcct 245 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagag 305 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 306 gaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaacc 365 Query: 241 g 241 | Sbjct: 366 g 366
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 333 bits (168), Expect = 4e-88 Identities = 333/386 (86%), Gaps = 9/386 (2%) Strand = Plus / Plus Query: 281 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 340 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 341 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 400 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 401 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 460 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 461 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 520 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 521 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 580 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 581 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 640 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 599 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 653 Query: 641 tcttaatagggcgattgtcactgctt 666 || ||| ||||||||||||||||||| Sbjct: 654 tc-taacagggcgattgtcactgctt 678 Score = 280 bits (141), Expect = 6e-72 Identities = 234/264 (88%), Gaps = 1/264 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | | Sbjct: 82 ggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactactt 141 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 142 gctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagag 201 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaacc 261 Query: 241 gtgaaaacggggttgtgggagagc 264 | |||| ||||||||||||||||| Sbjct: 262 gcgaaagcggggttgtgggagagc 285
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 454 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 513 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 514 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 573 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 574 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 333 bits (168), Expect = 4e-88 Identities = 333/386 (86%), Gaps = 9/386 (2%) Strand = Plus / Minus Query: 281 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 340 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 341 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 400 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 401 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 460 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 461 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 520 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 521 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 580 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 581 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 640 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 124612 Query: 641 tcttaatagggcgattgtcactgctt 666 || ||| ||||||||||||||||||| Sbjct: 124611 tc-taacagggcgattgtcactgctt 124587 Score = 333 bits (168), Expect = 4e-88 Identities = 333/386 (86%), Gaps = 9/386 (2%) Strand = Plus / Plus Query: 281 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 340 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 341 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 400 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 401 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 460 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 461 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 520 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 521 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 580 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 581 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 640 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 95254 Query: 641 tcttaatagggcgattgtcactgctt 666 || ||| ||||||||||||||||||| Sbjct: 95255 tc-taacagggcgattgtcactgctt 95279 Score = 280 bits (141), Expect = 6e-72 Identities = 234/264 (88%), Gaps = 1/264 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||| Sbjct: 125242 ggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcgg 125184 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | | Sbjct: 125183 ggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactactt 125124 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 125123 gctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagag 125064 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 125063 gaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaacc 125004 Query: 241 gtgaaaacggggttgtgggagagc 264 | |||| ||||||||||||||||| Sbjct: 125003 gcgaaagcggggttgtgggagagc 124980 Score = 280 bits (141), Expect = 6e-72 Identities = 234/264 (88%), Gaps = 1/264 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||| | ||||||||||||||||||| Sbjct: 94624 ggtggatacctaggcacccagag-acgaagaagggcgtggtaagcgacgaaatgcttcgg 94682 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | | Sbjct: 94683 ggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactactt 94742 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||||| Sbjct: 94743 gctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagag 94802 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 94803 gaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaacc 94862 Query: 241 gtgaaaacggggttgtgggagagc 264 | |||| ||||||||||||||||| Sbjct: 94863 gcgaaagcggggttgtgggagagc 94886
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 321 bits (162), Expect = 2e-84 Identities = 292/332 (87%), Gaps = 10/332 (3%) Strand = Plus / Plus Query: 335 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 394 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 395 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 454 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 455 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 514 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 515 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 574 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 575 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 634 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| ||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaa 662 Query: 635 agcgagtcttaatagggcgattgtcactgctt 666 ||| |||||| ||||||| | ||||| ||||| Sbjct: 663 agcaagtcttcatagggcaaatgtcattgctt 694 Score = 133 bits (67), Expect = 8e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 134 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 193 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 194 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 253 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 254 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 313 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 314 a 314 | Sbjct: 325 a 325
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 309 bits (156), Expect = 6e-81 Identities = 263/296 (88%), Gaps = 7/296 (2%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 655 ||||| || || || ||||||||| |||||||||||||||||||||||||||| Sbjct: 615 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcgat 666 Score = 172 bits (87), Expect = 9e-40 Identities = 202/240 (84%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| ||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 10 ggyggagacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 68 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 69 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 128 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 129 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 188 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 189 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 309 bits (156), Expect = 6e-81 Identities = 263/296 (88%), Gaps = 7/296 (2%) Strand = Plus / Minus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 655 ||||| || || || ||||||||| |||||||||||||||||||||||||||| Sbjct: 115047 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcgat 114996 Score = 309 bits (156), Expect = 6e-81 Identities = 263/296 (88%), Gaps = 7/296 (2%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 655 ||||| || || || ||||||||| |||||||||||||||||||||||||||| Sbjct: 86941 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcgat 86992 Score = 184 bits (93), Expect = 2e-43 Identities = 204/240 (85%), Gaps = 1/240 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 115653 ggtggatacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 115595 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 115594 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 115535 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 115534 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 115475 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115474 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 184 bits (93), Expect = 2e-43 Identities = 204/240 (85%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| |||| | |||| |||||||||| || |||||||| ||| ||| Sbjct: 86335 ggtggatacctaggcatccagag-acgacgaagggcgtactaatcgacgaaacgctccgg 86393 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 86394 gaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctcc 86453 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| || || | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 86454 gctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagag 86513 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86514 gaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 295 bits (149), Expect = 1e-76 Identities = 308/359 (85%), Gaps = 4/359 (1%) Strand = Plus / Plus Query: 305 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 364 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 365 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 424 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 425 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 484 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 485 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 544 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 545 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 604 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 605 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 663 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4667 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Score = 228 bits (115), Expect = 2e-56 Identities = 209/238 (87%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 4056 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 4114 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 4115 ggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc- 4173 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||||||| || | |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 4174 gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccagag 4233 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 238 ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 4234 gaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 295 bits (149), Expect = 1e-76 Identities = 308/359 (85%), Gaps = 4/359 (1%) Strand = Plus / Plus Query: 305 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 364 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 365 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 424 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 425 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 484 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 485 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 544 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 545 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 604 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 605 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 663 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Score = 220 bits (111), Expect = 5e-54 Identities = 208/238 (87%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 82 ggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc- 140 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| || | |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 141 gctgaatacataggcggataagagagaacctggtgaactgaaacatcttagtagccagag 200 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 238 ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 201 gaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 295 bits (149), Expect = 1e-76 Identities = 308/359 (85%), Gaps = 4/359 (1%) Strand = Plus / Plus Query: 305 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 364 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 365 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 424 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 425 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 484 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 485 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 544 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 545 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 604 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 605 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 663 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Score = 228 bits (115), Expect = 2e-56 Identities = 209/238 (87%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 82 ggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc- 140 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||||||| || | |||||| ||||||| |||||||||||||||||||||||||| Sbjct: 141 gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccagag 200 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 238 ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 201 gaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 313 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 371 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 372 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 431 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 432 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 491 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 492 gaaatagaacgtgaaaccgtgctgagctcc 521 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 313 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 371 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 372 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 431 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 432 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 491 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 492 gaaatagaacgtgaaaccgtgctgagctcc 521 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 313 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 371 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 372 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 431 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 432 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 491 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 492 gaaatagaacgtgaaaccgtgctgagctcc 521 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 514 tgagctcccaagcagtgggaggggaaagtgatc 546 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575 Score = 44.1 bits (22), Expect = 0.58 Identities = 67/82 (81%) Strand = Plus / Plus Query: 569 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 628 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9056578 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9056637 Query: 629 agcgaaagcgagtcttaatagg 650 ||||||||||| |||||||||| Sbjct: 9056638 agcgaaagcgactcttaatagg 9056659
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 313 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 371 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 372 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 431 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 432 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 491 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 492 gaaatagaacgtgaaaccgtgctgagctcc 521 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 514 tgagctcccaagcagtgggaggggaaagtgatc 546 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272 Score = 44.1 bits (22), Expect = 0.58 Identities = 67/82 (81%) Strand = Plus / Plus Query: 569 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 628 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9128275 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9128334 Query: 629 agcgaaagcgagtcttaatagg 650 ||||||||||| |||||||||| Sbjct: 9128335 agcgaaagcgactcttaatagg 9128356
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 287 bits (145), Expect = 2e-74 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 419 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 478 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 538 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 539 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 598 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 599 ggttaag 605 ||||||| Sbjct: 574 ggttaag 580 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 30 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 88 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 89 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 148 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 149 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 209 tagcggcgagcgaaatgggagcagcctaaacc 240 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 287 bits (145), Expect = 2e-74 Identities = 160/164 (97%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 1567 ggtggatacctaggtacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcgg 1625 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1626 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 1685 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaac 164 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1686 gctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 276 bits (139), Expect = 9e-71 Identities = 257/293 (87%), Gaps = 10/293 (3%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 600 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 652 ||||||| | | | |||||||| |||||||||||||||| |||||||| Sbjct: 605 gttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggc 653 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 200 ttcccgtagtagcggcgagcgaa 222 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 600 gttaagg 606 ||||||| Sbjct: 644 gttaagg 650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 85 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 144 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 145 acaacctggcgaactgaaacat 166 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 7e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 534 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 575 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 452 taccgtgagggaaaggtgaaaagaacc 478 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 85 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 144 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 145 acaacctggcgaactgaaacat 166 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 85 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 144 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 145 acaacctggcgaactgaaacat 166 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 84 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 85 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 144 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 145 acaacctggcgaactgaaacat 166 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 354 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 413 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 414 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 473 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 474 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 533 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 534 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 593 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 594 ggcttggttaagg 606 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 147 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 206 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 207 agtagcggcgagcgaaatgggagcagcctaaacc 240 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 25 acgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 7 acgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 254 bits (128), Expect = 3e-64 Identities = 181/195 (92%), Gaps = 3/195 (1%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaa-tgcttcg 59 |||||||||| |||||||||| | ||||||||| |||||| ||||||||||| ||||||| Sbjct: 89860 ggtggataccaaggcacccagag-acgaggaagagcgtagtaagcgacgaaaatgcttcg 89802 Query: 60 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 ||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| Sbjct: 89801 gggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc- 89743 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 89742 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccaga 89683 Query: 180 ggaaaagaaagcaaa 194 ||||||||||||||| Sbjct: 89682 ggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 254 bits (128), Expect = 3e-64 Identities = 181/195 (92%), Gaps = 3/195 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaa-tgcttcg 59 |||||||||| |||||||||| | ||||||||| |||||| ||||||||||| ||||||| Sbjct: 410 ggtggataccaaggcacccagag-acgaggaagagcgtagtaagcgacgaaaatgcttcg 468 Query: 60 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119 ||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| Sbjct: 469 gggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc- 527 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 528 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccaga 587 Query: 180 ggaaaagaaagcaaa 194 ||||||||||||||| Sbjct: 588 ggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 434 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 252 bits (127), Expect = 1e-63 Identities = 225/257 (87%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 353 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 412 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 413 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 472 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 473 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 532 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 533 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 592 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 593 tggcttggttaagggaa 609 ||||| ||||||||||| Sbjct: 617 tggctgggttaagggaa 633 Score = 198 bits (100), Expect = 2e-47 Identities = 207/239 (86%), Gaps = 3/239 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||| || ||| | |||| ||||||||||| ||||||||||| ||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaagaagggcgtagtaagcgacgaaacgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct-tttaaactgcc 119 ||||| ||||| | | ||||||||||||||||| ||| || |||| ||| |||||| Sbjct: 82 ggagtcgaaaacagacgtagatccggagattcccgaatggggtaacccctttgtactgcc 141 Query: 120 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||||| ||| ||| | |||||||||||||| ||||||||||||||||||| ||||| Sbjct: 142 -gctgaattcataagcggataagagacaacctggtgaactgaaacatcttagtaaccaga 200 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 238 |||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 201 ggaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 599 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 600 gttaagg 606 ||||||| Sbjct: 611 gttaagg 617 Score = 163 bits (82), Expect = 9e-37 Identities = 202/241 (83%), Gaps = 1/241 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||||| || | |||| ||||||||| | | |||||| | ||| ||| Sbjct: 10 ggtggatacctaggcacctagag-acgaagaagggcgtcactaccgacgatacgctccgg 68 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||||| | ||||||||||||||| ||| || |||||| ||| ||| Sbjct: 69 ggagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactccct 128 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| ||| Sbjct: 129 gctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccggag 188 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||| ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 189 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaaacc 248 Query: 241 g 241 | Sbjct: 249 g 249 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 618 accggagccgtagcgaaagcgagtcttaatagggcgattgtcact 662 ||||||||| ||||||||||||||| ||||||||| ||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcact 668
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 5e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 288 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 347 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 348 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 407 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 408 accttgcaaggctaaatactcctgggtgaccga 440 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 596 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 85.7 bits (43), Expect = 2e-13 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| |||||||||||||| | |||| ||||||||||| || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcgg 68 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 69 ggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 116 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 621 ggagccgtagcgaaagcgagtcttaatagggcg 653 |||||| |||||||||||||||| ||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcg 682
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 596 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 97.6 bits (49), Expect = 5e-17 Identities = 94/108 (87%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| ||||||||||| || |||||||| ||||||| Sbjct: 1776 ggtggatacctaggcacccagag-acgatgaagggcgtagtaaccgacgaaacgcttcgg 1834 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1835 ggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 1882 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 621 ggagccgtagcgaaagcgagtcttaatagggcg 653 |||||| |||||||||||||||| ||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcg 2451
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 238 bits (120), Expect = 2e-59 Identities = 219/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 478 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 538 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 539 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 598 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 599 ggttaaggg 607 ||||||||| Sbjct: 590 ggttaaggg 598 Score = 123 bits (62), Expect = 8e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 146 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 205 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 206 tagtagcggcgagcgaaatgggagcagcctaaac 239 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 236 bits (119), Expect = 8e-59 Identities = 217/249 (87%), Gaps = 3/249 (1%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 419 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 478 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 538 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 539 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 598 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 599 ggttaaggg 607 ||||||||| Sbjct: 1021 ggttaaggg 1029 Score = 176 bits (89), Expect = 6e-41 Identities = 206/242 (85%), Gaps = 4/242 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||| |||| || |||| ||||||||||| ||||||||||||||||||| Sbjct: 426 ggtggatacctagacacctaga-aacgatgaagggcgtagaaagcgacgaaatgcttcgg 484 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 | || || ||| || | |||||||||||| |||||| |||||| | ||||||| | Sbjct: 485 ttaactgcgaacaag--taaacccggagattcccgaatagggcaacctgt-aaactgctt 541 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| || | |||||||||||||| ||||||||||||||||||| |||||| Sbjct: 542 gctgaattcataggcgagtaagagacaacctggtgaactgaaacatcttagtaaccagag 601 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| |||||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 602 gaacagaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 661 Query: 241 gt 242 || Sbjct: 662 gt 663
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 234 bits (118), Expect = 3e-58 Identities = 256/300 (85%), Gaps = 9/300 (3%) Strand = Plus / Plus Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 424 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 483 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 484 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 543 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 544 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 603 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 604 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 663 || |||| |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 622 ag-----ggaatccaccgaagccatagcgaaagcaagtctt-tcagggcgattgtcactg 675 Score = 208 bits (105), Expect = 2e-50 Identities = 222/260 (85%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| |||| | |||| ||||||||||| |||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagag-acgaagaagggcgtagtcagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||||||| ||||| |||||||| |||||| ||||| || ||| ||| Sbjct: 82 ggagctgcgaacaagcataaatccgaagattcccgaatagggtaacctcttgtactacct 141 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 | |||| || | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 142 gtagaattaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 201 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||| Sbjct: 202 gaaaagaaagcaaaagcgattccctcagtagtggcgagcgaaacgggaacagcctaaacc 261 Query: 241 gtgaaaacggggttgtggga 260 | |||| ||||||||||||| Sbjct: 262 gcgaaagcggggttgtggga 281
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 307 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 366 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 367 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 426 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 427 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 486 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 487 gtagtgaaatagaacgtgaaa 507 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 182 bits (92), Expect = 1e-42 Identities = 218/255 (85%), Gaps = 4/255 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | | || ||||||| || || || |||||||||||| Sbjct: 21 ggtggatacctaggcacccaggg-atgaagaagggcataataattgatgaaatgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||||| ||||||| ||||||||||||||||||| ||||||| ||||||| |||||| || Sbjct: 80 ggagttaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ct 138 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||| | |||||| |||| ||| ||| ||||||| |||||||| ||||||||||| ||||| Sbjct: 139 gcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacagag 196 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||||| |||||||||| ||| || |||||| |||||| |||| |||| ||||||||||| Sbjct: 197 gaaaataaagcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaacc 256 Query: 241 gtgaaaacggggttg 255 | |||| ||||||| Sbjct: 257 gctaaaatggggttg 271 Score = 103 bits (52), Expect = 7e-19 Identities = 105/121 (86%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 606 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 665 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 666 t 666 | Sbjct: 681 t 681
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 230 bits (116), Expect = 5e-57 Identities = 191/214 (89%), Gaps = 9/214 (4%) Strand = Plus / Plus Query: 453 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 512 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 513 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 572 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 573 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 632 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgtagcg 171 Query: 633 aaagcgagtcttaatagggcgattgtcactgctt 666 |||||||||||| ||||||| ||||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgctt 205
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 228 bits (115), Expect = 2e-56 Identities = 226/262 (86%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| |||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| ||| Sbjct: 82 ggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacct 141 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 | ||| ||| | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 142 gtaaaatacataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 201 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| | |||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 202 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 261 Query: 241 gtgaaaacggggttgtgggaga 262 |||||| ||||||||||||||| Sbjct: 262 gtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 3e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 424 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 483 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 484 tgggtagtgaaatagaacgtgaaacc 509 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 109 bits (55), Expect = 1e-20 Identities = 101/115 (87%), Gaps = 6/115 (5%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 608 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 609 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 663 | |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactg 675
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 153 bits (77), Expect = 9e-34 Identities = 200/235 (85%), Gaps = 5/235 (2%) Strand = Plus / Plus Query: 4 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 63 |||||||||||||||||| | ||| ||||||| || || || ||||||||||||||| Sbjct: 24 ggatacctaggcacccagggt-cgaagaagggcataataattgatgaaatgcttcgggga 82 Query: 64 gttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 122 ||| |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| ||| Sbjct: 83 gttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgc 141 Query: 123 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 182 | | |||||| | || ||||||| |||| || ||||||||||||||||||| |||||||| Sbjct: 142 ttattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagagga 199 Query: 183 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 237 ||| |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 200 aaataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 502 gtgaaa 507 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 606 gg 607 || Sbjct: 601 gg 602
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 ag 229 || Sbjct: 245 ag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 502 gtgaaa 507 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 606 gg 607 || Sbjct: 601 gg 602
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 agcagcctaa 237 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 537 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 538 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 597 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 598 tggttaagg 606 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 537 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 538 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 597 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 598 tggttaagg 606 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 3e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 540 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 596 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 200 ttcccgtagtagcggcgagcgaaatggga 228 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccg 510 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 45 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 104 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 105 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 164 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 165 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 224 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 225 gggagcagcctaaacc 240 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgact 583 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 629 agcgaaagcgagtcttaatagggc 652 ||||||||||||||| |||||||| Sbjct: 873 agcgaaagcgagtctgaatagggc 896
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 212 bits (107), Expect = 1e-51 Identities = 224/262 (85%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| |||| | |||| ||||||||||| |||||||||||||||| || Sbjct: 3057 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgctttgg 3115 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| ||| Sbjct: 3116 ggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacct 3175 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 | ||| ||| |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 3176 gtaaaatacatagtcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 3235 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| | |||||||||||||||||| |||||| ||||||||||| |||| ||||||||||| Sbjct: 3236 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaacc 3295 Query: 241 gtgaaaacggggttgtgggaga 262 |||||| ||||||||||||||| Sbjct: 3296 gtgaaagcggggttgtgggaga 3317 Score = 194 bits (98), Expect = 3e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 424 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 483 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 484 tgggtagtgaaatagaacgtgaaacc 509 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 109 bits (55), Expect = 1e-20 Identities = 101/115 (87%), Gaps = 6/115 (5%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 608 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 609 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 663 | |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactg 3709
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 322 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 381 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 382 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 441 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 442 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 501 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 502 gtgaaa 507 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 49 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 107 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 108 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 167 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 168 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 227 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 228 ag 229 || Sbjct: 245 ag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 606 gg 607 || Sbjct: 602 gg 603
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 7e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 136 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 195 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 196 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgact 583 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 7e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 159 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 218 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 219 cgaaatgggagcagcctaaacc 240 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 547 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 596 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 46.1 bits (23), Expect = 0.15 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| |||||||||||||| | |||| |||||||| || | || ||||| ||||||| Sbjct: 3 ggyggagacctaggcacccagag-acgatgaagggcgcagataccggcgaaacgcttcgg 61 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 62 ggagctggcaacaagctttgatccgaagatccccgaatagggcaacct 109 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 630 gcgaaagcgagtcttaatagggcga 654 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 7e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 537 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 538 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 595 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 618 accggagccgtagcgaaagcgagtcttaatagggcg 653 ||||||||| ||||||||||||||| ||||||||| Sbjct: 685 accggagcccaagcgaaagcgagtctgaatagggcg 720
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 204 bits (103), Expect = 3e-49 Identities = 187/212 (88%), Gaps = 11/212 (5%) Strand = Plus / Plus Query: 455 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 514 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 515 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 574 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 575 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 634 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaa 169 Query: 635 agcgagtcttaatagggcgattgtcactgctt 666 |||||||||| ||||||| ||||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgctt 201
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 1e-48 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 478 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 538 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 539 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 598 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 599 ggttaagg 606 |||||||| Sbjct: 675 ggttaagg 682 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 359 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 418 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 419 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 478 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 479 cc 480 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 138 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 197 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 198 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 550 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/90 (85%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| | || | |||||||||||||| | | |||||||||||||||| Sbjct: 23 ggtggatacctaggcatctagag-acgaggaagggcgtggttaccgacgaaatgcttcgg 81 Query: 61 ggagttgaaaataagcatagatccggagat 90 ||||||| ||| | || |||||||||||| Sbjct: 82 ggagttggaaagaggctgagatccggagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 364 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 423 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 424 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 483 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 484 tgggtagtgaaatagaacgtgaaacc 509 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 192 bits (97), Expect = 1e-45 Identities = 220/260 (84%), Gaps = 1/260 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| |||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 1790 ggtggatacctaggcatccagag-acgaagaagggcgtagtaagcgacgaaatgcttcgg 1848 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || ||| ||| ||||| |||||||| |||||| ||||| || ||| ||| Sbjct: 1849 ggagctgcgaacaagtataaatccgaagattcccgaatagggtaacctcttgtactacct 1908 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 | |||| || | |||| ||||| ||||| | ||||||||||||||||||||| |||| Sbjct: 1909 gtataatcaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagag 1968 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 ||| | |||||||||||||||||| |||||| ||||||||||| |||| | ||||||||| Sbjct: 1969 gaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaaccgcctaaacc 2028 Query: 241 gtgaaaacggggttgtggga 260 || ||| ||||||||||||| Sbjct: 2029 gttaaagcggggttgtggga 2048
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 200 bits (101), Expect = 4e-48 Identities = 164/184 (89%), Gaps = 1/184 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| |||||||||| || |||||||| ||||||| Sbjct: 724 ggtggatacctaggcacccagag-acgaagaagggcgtactaaccgacgaaacgcttcgg 782 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| |||||| |||||| ||||||||||||||| |||||| |||||| || |||| ||| Sbjct: 783 ggagctgaaaagaagcattgatccggagattcccgaatagggcaacctcttgaacttcct 842 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 843 gctgaattcataggcaggatagagacaacctggcgaactgaaacatcttagtagccagag 902 Query: 181 gaaa 184 |||| Sbjct: 903 gaaa 906
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 478 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 479 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 537 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 538 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 597 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 598 tggttaagg 606 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 478 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 479 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 537 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 538 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 597 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 598 tggttaagg 606 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 619 ccggagccgtagcgaaagcgagtcttaatagggcgat 655 |||||||| ||||||||||||||| ||||||||||| Sbjct: 155586 ccggagcccaagcgaaagcgagtctgaatagggcgat 155550 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 619 ccggagccgtagcgaaagcgagtcttaatagggcgat 655 |||||||| ||||||||||||||| ||||||||||| Sbjct: 78306 ccggagcccaagcgaaagcgagtctgaatagggcgat 78342 Score = 46.1 bits (23), Expect = 0.15 Identities = 92/114 (80%), Gaps = 1/114 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 156279 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 156221 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 114 |||| || || |||||| |||||| |||| ||| |||||| |||||| ||||| Sbjct: 156220 ggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaaa 156167 Score = 46.1 bits (23), Expect = 0.15 Identities = 92/114 (80%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 77613 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 77671 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 114 |||| || || |||||| |||||| |||| ||| |||||| |||||| ||||| Sbjct: 77672 ggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaaa 77725
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 420 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 478 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 536 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 537 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 596 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 597 tt 598 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 159 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 218 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 219 cgaa 222 |||| Sbjct: 238 cgaa 241 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 630 gcgaaagcgagtcttaatagggcg 653 |||||||||||||| ||||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcg 690
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 159 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 218 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 219 cgaaatgggagcagcctaaacc 240 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 596 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 619 ccggagccgtagcgaaagcgagtcttaa 646 |||||||| |||||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa 847
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 8e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 215 cgagcgaaatgggagcagcctaaac 239 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 597 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 50.1 bits (25), Expect = 0.009 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 50.1 bits (25), Expect = 0.009 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 619 ccggagccgtagcgaaagcgagtcttaatagggcg 653 |||||||| ||||||||||||||| ||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcg 735
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 2e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 159 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 218 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 219 cgaaatgggagcagcctaaacc 240 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 2e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 604 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 420 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 478 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 536 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 537 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 596 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 597 tt 598 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 159 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 218 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 219 cgaa 222 |||| Sbjct: 219 cgaa 222 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 630 gcgaaagcgagtcttaatagggcg 653 |||||||||||||| ||||||||| Sbjct: 648 gcgaaagcgagtctgaatagggcg 671
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 619 ccggagccgtagcgaaagcgagtcttaatagggcg 653 |||||||| ||||||||||||||| ||||||||| Sbjct: 151740 ccggagcccaagcgaaagcgagtctgaatagggcg 151706 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 619 ccggagccgtagcgaaagcgagtcttaatagggcg 653 |||||||| ||||||||||||||| ||||||||| Sbjct: 42463 ccggagcccaagcgaaagcgagtctgaatagggcg 42497 Score = 42.1 bits (21), Expect = 2.3 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 152360 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 152302 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 152301 ggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 152254 Score = 42.1 bits (21), Expect = 2.3 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 41843 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 41901 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 41902 ggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 41949
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 420 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 478 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 536 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 537 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 596 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 597 tt 598 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 159 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 218 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 219 cgaa 222 |||| Sbjct: 238 cgaa 241 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 630 gcgaaagcgagtcttaatagggcg 653 |||||||||||||| ||||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcg 690
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 50.1 bits (25), Expect = 0.009 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 619 ccggagccgtagcgaaagcgagtcttaatagggcg 653 |||||||| ||||||||||||||| ||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcg 735
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 8e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 215 cgagcgaaatgggagcagcctaaac 239 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 597 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 50.1 bits (25), Expect = 0.009 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 619 ccggagccgtagcgaaagcgagtcttaatagggcg 653 |||||||| ||||||||||||||| ||||||||| Sbjct: 635 ccggagcccaagcgaaagcgagtctgaatagggcg 669 Score = 42.1 bits (21), Expect = 2.3 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 15 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 73 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 74 ggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 121
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 619 ccggagccgtagcgaaagcgagtcttaatagggcg 653 |||||||| ||||||||||||||| ||||||||| Sbjct: 720 ccggagcccaagcgaaagcgagtctgaatagggcg 754 Score = 42.1 bits (21), Expect = 2.3 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 100 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 158 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 159 ggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 206
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 7e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 363 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 422 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 423 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 482 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 483 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 542 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 543 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 591 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 3e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 480 ccagtgggtagtgaaatagaacgtgaaacc 509 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 83.8 bits (42), Expect = 7e-13 Identities = 87/101 (86%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 8 acctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcggggagttg 67 |||||||||||||| | |||| ||||||||| | || |||||||| ||||||||||| || Sbjct: 9 acctaggcacccagag-acgatgaagggcgtggaaaccgacgaaacgcttcggggagctg 67 Query: 68 aaaataagcatagatccggagattcccaaataggtcaacct 108 ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 68 gaaacaagcaatgatccggagattcccgaatagggcaacct 108 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgact 583 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 619 ccggagccgtagcgaaagcgagtcttaatagggcgat 655 ||||||||| ||||||||| ||||| ||||||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgat 657
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 3e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 468 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 527 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 528 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 577 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 3e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 480 ccagtgggtagtgaaatagaacgtgaaacc 509 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 75.8 bits (38), Expect = 2e-10 Identities = 90/105 (85%), Gaps = 2/105 (1%) Strand = Plus / Plus Query: 4 ggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgggga 63 ||||||||||||||| || | |||| ||||||||| | || |||||||| |||||||||| Sbjct: 24815 ggatacctaggcacctagag-acgatgaagggcgtgg-aaccgacgaaacgcttcgggga 24872 Query: 64 gttgaaaataagcatagatccggagattcccaaataggtcaacct 108 | || ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 24873 gctggaaacaagcaatgatccggagattcccgaatagggcaacct 24917 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgact 583 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 619 ccggagccgtagcgaaagcgagtcttaatagggcgat 655 ||||||||| ||||||||| ||||| ||||||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgat 25466
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 1e-45 Identities = 136/149 (91%) Strand = Plus / Plus Query: 363 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 422 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 423 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 482 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 483 gtgggtagtgaaatagaacgtgaaaccgt 511 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 556 gtgcctgttgaagaatgagccggcgactcatagg 589 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 1e-45 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 478 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 538 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 539 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 583 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 192 bits (97), Expect = 1e-45 Identities = 100/101 (99%) Strand = Plus / Plus Query: 566 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 626 cgtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgctt 102
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 619 ccggagccgtagcgaaagcgagtcttaatagggcg 653 |||||||| ||||||||||||||| ||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcg 678 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 54 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 4e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 539 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 540 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 598 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 599 ggttaagg 606 |||||||| Sbjct: 800 ggttaagg 807 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 619 ccggagccgtagcgaaagcgagtcttaatagggcga 654 |||||||| ||||||||||||||||||||||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcga 851
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 190 bits (96), Expect = 4e-45 Identities = 99/100 (99%) Strand = Plus / Plus Query: 567 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 627 gtagcgaaagcgagtcttaatagggcgattgtcactgctt 666 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgctt 100
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 607 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 623 agccgtagcgaaagcgagtcttaatagggcg 653 |||| |||||||||||||||| ||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcg 686 Score = 42.1 bits (21), Expect = 2.3 Identities = 87/108 (80%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgaagaagggcgcagataccggcgatacgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 80 ggagctggcaacaagctttgatccgaagattcccgaatagggcaacct 127
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 535 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 535 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043 Score = 81.8 bits (41), Expect = 3e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| |||||||||||||| |||||||| || ||| Sbjct: 171496 ggtggatacctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccgg 171438 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 171437 ggagctggaagcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 81.8 bits (41), Expect = 3e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| |||||||||||||| |||||||| || ||| Sbjct: 121430 ggtggatacctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccgg 121488 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 121489 ggagctggaagcaagctctgatccggagattcccgaatagggcaacct 121536
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 535 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 141 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 200 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 201 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634 Score = 81.8 bits (41), Expect = 3e-12 Identities = 92/108 (85%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 ||||||||||||||||||||| | |||| |||||||||||||| |||||||| || ||| Sbjct: 21 ggtggatacctaggcacccagag-acgaagaagggcgtagcaaccgacgaaaccctccgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 |||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 80 ggagctggaagcaagctctgatccggagattcccgaatagggcaacct 127
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 184 bits (93), Expect = 2e-43 Identities = 114/121 (94%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 606 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 665 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 666 t 666 | Sbjct: 177 t 177
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 184 bits (93), Expect = 2e-43 Identities = 114/121 (94%), Gaps = 5/121 (4%) Strand = Plus / Plus Query: 546 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 606 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 665 |||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 666 t 666 | Sbjct: 161 t 161
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 478 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 479 cccagtgggtagtgaaatagaacgtgaaaccgt 511 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 137 bits (69), Expect = 5e-29 Identities = 201/242 (83%), Gaps = 3/242 (1%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| |||||||||| ||| | |||| ||||||||| | || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcactcagag-acgatgaagggcgtggtaaccgacgaaacgcttcgg 68 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || | | ||| | |||||| |||||||| |||||| |||||| || ||| | | Sbjct: 69 ggagctggatacgagctttgatccgaagattcccgaatagggcaacctcttggactcctt 128 Query: 121 gctgaatccatgagc-aggcaagagacaacctggcgaactgaaacatcttagtagccaga 179 ||||| ||| ||| | | |||||| |||| || ||| ||||||||||||||| || || Sbjct: 129 agtgaattcat-agctaagaaagagataacccggtgaattgaaacatcttagtaaccgga 187 Query: 180 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 239 ||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 188 ggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaac 247 Query: 240 cg 241 || Sbjct: 248 cg 249 Score = 95.6 bits (48), Expect = 2e-16 Identities = 94/109 (86%), Gaps = 4/109 (3%) Strand = Plus / Plus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 607 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagg- 687 Query: 608 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 656 ||| | |||||||| ||||||||| |||||||||||||||||| Sbjct: 688 ---agaatcatccggagccagagcgaaagcaagtcttaatagggcgatt 733
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 1e-42 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 478 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 479 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 535 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 536 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 589 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 113 bits (57), Expect = 8e-22 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 48 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 107 ||||| ||||||||||| || || |||||| |||||| |||| ||| |||||| ||||| Sbjct: 49 cgaaacgcttcggggagctggcaacaagcatcgatccgaagatccccgaatagggcaacc 108 Query: 108 tttta-aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 166 | ||| ||||||| |||||| ||| | || |||| |||| ||||| |||||||| Sbjct: 109 tcttagaactgcccactgaattcataggtgggtcagaggcaactcagcgaattgaaacat 168 Query: 167 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 226 ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 169 cttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatgg 228 Query: 227 gagcagcctaaac 239 || |||||||||| Sbjct: 229 gaacagcctaaac 241 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 629 agcgaaagcgagtcttaatagggcg 653 ||||||||||||||| ||||||||| Sbjct: 643 agcgaaagcgagtctgaatagggcg 667
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 1e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgt 511 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 159 bits (80), Expect = 1e-35 Identities = 179/212 (84%) Strand = Plus / Plus Query: 30 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 89 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 90 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 149 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 150 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 209 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 210 agcggcgagcgaaatgggagcagcctaaaccg 241 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 547 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 2e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 480 ccagtgggtagtgaaatagaacgtgaaacc 509 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 5e-17 Identities = 193/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaaactacct 139 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||| ||| ||| ||||| ||||| | |||||||||||||| |||||| ||| Sbjct: 140 atataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggag 199 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 200 gaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 629 agcgaaagcgagtcttaatagggcg 653 ||||||||||||||||||||||||| Sbjct: 659 agcgaaagcgagtcttaatagggcg 683
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 2e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 480 ccagtgggtagtgaaatagaacgtgaaacc 509 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 155 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 214 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 215 cgagcgaaatgggagcagcctaaacc 240 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgact 583 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 2e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 480 ccagtgggtagtgaaatagaacgtgaaacc 509 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 97.6 bits (49), Expect = 5e-17 Identities = 193/240 (80%), Gaps = 1/240 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||| |||||||||| ||| | |||| |||||||| || | || ||| | ||||||| Sbjct: 21 ggtggagacctaggcactcagag-acgatgaagggcgcagataccggcgatacgcttcgg 79 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| Sbjct: 80 ggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaaactacct 139 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||| ||| ||| ||||| ||||| | |||||||||||||| |||||| ||| Sbjct: 140 atataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggag 199 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 200 gaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 548 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 629 agcgaaagcgagtcttaatagggcg 653 ||||||||||||||||||||||||| Sbjct: 659 agcgaaagcgagtcttaatagggcg 683
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 2e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 538 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 539 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 598 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 599 ggttaa 604 |||||| Sbjct: 731 ggttaa 736 Score = 129 bits (65), Expect = 1e-26 Identities = 198/240 (82%), Gaps = 2/240 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 |||||||||||||||| | || | |||| ||||||||| | || | ||||||||||||| Sbjct: 123 ggtggatacctaggcatctagag-acgatgaagggcgtggaaaccaacgaaatgcttcga 181 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 120 |||| || ||| |||| ||| ||||||||||| |||||| |||||||||| ||| ||| Sbjct: 182 ggagctggaaacaagctatgattcggagattcccgaatagggcaaccttttatactacct 241 Query: 121 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 180 ||||| ||| ||| ||||||||||| | ||| |||||||||||||||| ||| Sbjct: 242 attgaattcatagataggaaagagacaacccagtgaag-gaaacatcttagtagctggag 300 Query: 181 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 240 |||||||||||||| ||||||||| ||||||||||||||||||| | ||||||||||| Sbjct: 301 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatcccaacagcctaaacc 360
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 363 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 422 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 423 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 482 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 483 gtgggtagtgaaatagaacgtgaaaccgt 511 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 547 tctgaccgcgtgcctgttgaagaatgagccggcga 581 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 629 agcgaaagcgagtcttaatagggcgattgtcac 661 |||||||||||||| |||||||||||| ||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcac 294
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 6e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 480 ccagt-gggtagtgaaatagaacgtgaaaccgt 511 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 140 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 199 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 200 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 241 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 606 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaagg 771 Score = 61.9 bits (31), Expect = 2e-06 Identities = 89/108 (82%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 1 ggtggatacctaggcacccagngnacgaggaagggcgtagcaagcgacgaaatgcttcgg 60 || ||| |||||||||||||| | |||| ||||||||| | || |||||||| ||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaagaagggcgtggaaaccgacgaaacgcttcgg 68 Query: 61 ggagttgaaaataagcatagatccggagattcccaaataggtcaacct 108 | || || ||| |||| |||||| |||||||| |||||| |||||| Sbjct: 69 gaagctggaaacaagctatgatccgaagattcccgaatagggcaacct 116
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtg 512 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 153 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 212 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 213 ggcgagcgaaatgggagcagcctaaacc 240 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 589 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 621 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 511
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 360 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 419 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 420 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 479 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 480 ccagtgggtagtgaaatagaacgtgaaaccgtg 512 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 153 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 212 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 213 ggcgagcgaaatgggagcagcctaaacc 240 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 549 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 589 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 621 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 660 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 511 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,302,918 Number of Sequences: 3902068 Number of extensions: 4302918 Number of successful extensions: 126956 Number of sequences better than 10.0: 26658 Number of HSP's better than 10.0 without gapping: 26486 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 79569 Number of HSP's gapped (non-prelim): 45063 length of query: 666 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 643 effective length of database: 17,143,297,704 effective search space: 11023140423672 effective search space used: 11023140423672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
