ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal29f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507345.1| PREDICTED Oryza sativa (japonica cultivar-group... 367 3e-98
2ref|XM_483846.1| Oryza sativa (japonica cultivar-group), mRNA 367 3e-98
3dbj|AK066210.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 3e-98
4dbj|AK061598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 8e-96
5dbj|AB218881.1| Zea mays mRNA for PGR5, complete cds 226 7e-56
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 210 4e-51
7dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic D... 210 4e-51
8gb|AY389579.1| Hyacinthus orientalis unknown mRNA 60 1e-05
9dbj|AB218880.1| Portulaca oleracea mRNA for PGR5, complete cds 56 2e-04
10gb|AF110789.1|AF110789 Volvox carteri f. nagariensis clone G32 u... 52 0.002
11dbj|AB218882.1| Portulaca grandiflora mRNA for PGR5, complete cds 48 0.038
12emb|BX935607.2| Gallus gallus finished cDNA, clone ChEST166e9 46 0.15
13gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.59
14gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 44 0.59
15gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete se... 44 0.59
16gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete se... 44 0.59
17emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.59
18emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 44 0.59
19emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on ch... 44 0.59
20gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 44 0.59
21dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.59
22emb|Z35330.1|BJRIBRNA B.japonicum (110) genes for 16S, 23S, 5S r... 44 0.59
23gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 44 0.59
24emb|AJ937765.1| Uncultured candidate division OP8 bacterium fosm... 44 0.59
25gb|AC166102.2| Mus musculus BAC clone RP23-397O23 from chromosom... 42 2.3
26emb|CR855305.12| Zebrafish DNA sequence from clone DKEY-98F17 in... 42 2.3
27emb|AL117382.28|HSJ881L22 Human DNA sequence from clone RP5-881L... 42 2.3
28gb|CP000249.1| Frankia sp. CcI3, complete genome 42 2.3
29dbj|AB168805.1| Macaca fascicularis testis cDNA, clone: QtsA-14950 42 2.3
30dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.3
31emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 42 2.3
32ref|NM_101194.2| Arabidopsis thaliana unknown protein AT1G13220 ... 40 9.3
33gb|AC109498.10| Mus musculus chromosome 5, clone RP23-22K24, com... 40 9.3
34gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 9.3
35gb|AC124629.11| Mus musculus chromosome 7, clone RP23-437A23, co... 40 9.3
36gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 9.3
37gb|AC150554.1| Drosophila melanogaster clone BACR21O10, complete... 40 9.3
38ref|XM_960350.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.3
39ref|XM_331868.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.3
40gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 9.3
41gb|AC158301.4| Mus musculus chromosome 5, clone RP24-71D19, comp... 40 9.3
42emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 9.3
43gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome... 40 9.3
44gb|AC124202.3| Mus musculus BAC clone RP23-337F21 from chromosom... 40 9.3
45gb|AC125229.3| Mus musculus BAC clone RP23-45P1 from 5, complete... 40 9.3
46gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complet... 40 9.3
47emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in l... 40 9.3
48emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19... 40 9.3
49gb|AC013791.9| Homo sapiens chromosome 11, clone RP11-19N21, com... 40 9.3
50gb|AF332698.1| Sus scrofa CD47 antigen/integrin-associated prote... 40 9.3
51emb|BX842634.1| Neurospora crassa DNA linkage group I BAC contig... 40 9.3
52emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 9.3
53emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment ... 40 9.3
54emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene 40 9.3
55emb|BX005080.7| Mouse DNA sequence from clone RP23-333M14 on chr... 40 9.3
56gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, comp... 40 9.3
57gb|AE012532.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 9.3
58gb|AE012228.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 9.3
59gb|AC027796.9| Homo sapiens chromosome 17, clone RP11-235E17, co... 40 9.3
60gb|AC161418.4| Mus musculus BAC clone RP23-325K2 from chromosome... 40 9.3
61gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 9.3
62gb|AC005950.1|AC005950 Homo sapiens Chromosome 11p15.5 PAC clone... 40 9.3
63gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 9.3
64gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Canc... 40 9.3
65gb|AC007984.4|AC007984 Drosophila melanogaster, chromosome 3R, r... 40 9.3
66gb|AC159372.1| Mus musculus BAC clone RP24-285I4 from chromosome... 40 9.3
67gb|AF270494.2|AF270494 Sus scrofa CD47 antigen/integrin-associat... 40 9.3
68ref|NM_213982.1| Sus scrofa CD47 antigen/integrin-associated pro... 40 9.3
69gb|AC096632.3| Homo sapiens chromosome 1 clone RP11-38O14, compl... 40 9.3
70gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosom... 40 9.3
71gb|AY941330.1| Lycopersicon peruvianum putative sterol C-14 redu... 40 9.3
72dbj|AB109116.1| Streptomyces griseus SsgB mRNA, complete cds 40 9.3
73emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 9.3
74gb|AC145072.9| Mus musculus chromosome 5, clone RP24-94L5, compl... 40 9.3
75gb|AF117314.1|AF117314 Meriones unguiculatus prion protein (PrP)... 40 9.3
76gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 ... 40 9.3
77gb|AE003759.3| Drosophila melanogaster chromosome 3R, section 97... 40 9.3
78gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 9.3
79gb|AC003675.1|AC003675 Human Chromosome 11p15.5 P1 - 6959, compl... 40 9.3
80gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, comple... 40 9.3
81emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chr... 40 9.3
82gb|AC101869.13| Mus musculus chromosome 1, clone RP23-348D4, com... 40 9.3
83emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on ch... 40 9.3 
>ref|XM_507345.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0044E16.27
           mRNA
          Length = 886

 Score =  367 bits (185), Expect = 3e-98
 Identities = 245/265 (92%)
 Strand = Plus / Plus

                                                                       
Query: 120 cggcgcggccgcggtcggcgcggccccttcggacgcccgccaggatgggcaatgtaaacg 179
           |||||||||| |||||||||||||| || ||| |||| || ||||||||||| || ||||
Sbjct: 226 cggcgcggcctcggtcggcgcggccactgcgggcgccggcgaggatgggcaacgtgaacg 285

                                                                       
Query: 180 agggcaagggcatcttcgcgcccttggtggtggtggtgcgcaacatcgttggacgcaagc 239
           |||||||||| |||||||| ||  |||||||||||||||||||||||||||| |||||||
Sbjct: 286 agggcaaggggatcttcgcaccggtggtggtggtggtgcgcaacatcgttggccgcaagc 345

                                                                       
Query: 240 gcttcaaccagctcaggggcaaggccatcgcgctgcactcccaggtgatcaccgagttct 299
           ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 346 gcttcaaccagctcaggggaaaggccatcgcgctgcactcgcaggtgatcaccgagttct 405

                                                                       
Query: 300 gcaagaccatcggcgctgaccccaagcagaggcagggcttgatccgcctcgccaagaaga 359
           |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 406 gcaagaccatcggcgccgacgccaagcagaggcagggcttgatccgccttgccaagaaga 465

                                    
Query: 360 acggagagaagctcggattccttgc 384
           |||| ||||||||||| ||||||||
Sbjct: 466 acggcgagaagctcggtttccttgc 490



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 53  gctcttccgacgtggtctagctctgtgtccgg 84
           ||||| ||||||||||| ||||| ||||||||
Sbjct: 162 gctctcccgacgtggtccagctccgtgtccgg 193
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>ref|XM_483846.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 760

 Score =  367 bits (185), Expect = 3e-98
 Identities = 245/265 (92%)
 Strand = Plus / Plus

                                                                       
Query: 120 cggcgcggccgcggtcggcgcggccccttcggacgcccgccaggatgggcaatgtaaacg 179
           |||||||||| |||||||||||||| || ||| |||| || ||||||||||| || ||||
Sbjct: 238 cggcgcggcctcggtcggcgcggccactgcgggcgccggcgaggatgggcaacgtgaacg 297

                                                                       
Query: 180 agggcaagggcatcttcgcgcccttggtggtggtggtgcgcaacatcgttggacgcaagc 239
           |||||||||| |||||||| ||  |||||||||||||||||||||||||||| |||||||
Sbjct: 298 agggcaaggggatcttcgcaccggtggtggtggtggtgcgcaacatcgttggccgcaagc 357

                                                                       
Query: 240 gcttcaaccagctcaggggcaaggccatcgcgctgcactcccaggtgatcaccgagttct 299
           ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 358 gcttcaaccagctcaggggaaaggccatcgcgctgcactcgcaggtgatcaccgagttct 417

                                                                       
Query: 300 gcaagaccatcggcgctgaccccaagcagaggcagggcttgatccgcctcgccaagaaga 359
           |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 418 gcaagaccatcggcgccgacgccaagcagaggcagggcttgatccgccttgccaagaaga 477

                                    
Query: 360 acggagagaagctcggattccttgc 384
           |||| ||||||||||| ||||||||
Sbjct: 478 acggcgagaagctcggtttccttgc 502



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 53  gctcttccgacgtggtctagctctgtgtccgg 84
           ||||| ||||||||||| ||||| ||||||||
Sbjct: 174 gctctcccgacgtggtccagctccgtgtccgg 205
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>dbj|AK066210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056J23, full
           insert sequence
          Length = 886

 Score =  367 bits (185), Expect = 3e-98
 Identities = 245/265 (92%)
 Strand = Plus / Plus

                                                                       
Query: 120 cggcgcggccgcggtcggcgcggccccttcggacgcccgccaggatgggcaatgtaaacg 179
           |||||||||| |||||||||||||| || ||| |||| || ||||||||||| || ||||
Sbjct: 226 cggcgcggcctcggtcggcgcggccactgcgggcgccggcgaggatgggcaacgtgaacg 285

                                                                       
Query: 180 agggcaagggcatcttcgcgcccttggtggtggtggtgcgcaacatcgttggacgcaagc 239
           |||||||||| |||||||| ||  |||||||||||||||||||||||||||| |||||||
Sbjct: 286 agggcaaggggatcttcgcaccggtggtggtggtggtgcgcaacatcgttggccgcaagc 345

                                                                       
Query: 240 gcttcaaccagctcaggggcaaggccatcgcgctgcactcccaggtgatcaccgagttct 299
           ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 346 gcttcaaccagctcaggggaaaggccatcgcgctgcactcgcaggtgatcaccgagttct 405

                                                                       
Query: 300 gcaagaccatcggcgctgaccccaagcagaggcagggcttgatccgcctcgccaagaaga 359
           |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 406 gcaagaccatcggcgccgacgccaagcagaggcagggcttgatccgccttgccaagaaga 465

                                    
Query: 360 acggagagaagctcggattccttgc 384
           |||| ||||||||||| ||||||||
Sbjct: 466 acggcgagaagctcggtttccttgc 490



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 53  gctcttccgacgtggtctagctctgtgtccgg 84
           ||||| ||||||||||| ||||| ||||||||
Sbjct: 162 gctctcccgacgtggtccagctccgtgtccgg 193
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>dbj|AK061598.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A06, full
           insert sequence
          Length = 760

 Score =  359 bits (181), Expect = 8e-96
 Identities = 244/265 (92%)
 Strand = Plus / Plus

                                                                       
Query: 120 cggcgcggccgcggtcggcgcggccccttcggacgcccgccaggatgggcaatgtaaacg 179
           |||||||||| |||||||||||||| || ||| |||| || ||||||||||| ||  |||
Sbjct: 238 cggcgcggcctcggtcggcgcggccactgcgggcgccggcgaggatgggcaacgtggacg 297

                                                                       
Query: 180 agggcaagggcatcttcgcgcccttggtggtggtggtgcgcaacatcgttggacgcaagc 239
           |||||||||| |||||||| ||  |||||||||||||||||||||||||||| |||||||
Sbjct: 298 agggcaaggggatcttcgcaccggtggtggtggtggtgcgcaacatcgttggccgcaagc 357

                                                                       
Query: 240 gcttcaaccagctcaggggcaaggccatcgcgctgcactcccaggtgatcaccgagttct 299
           ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 358 gcttcaaccagctcaggggaaaggccatcgcgctgcactcgcaggtgatcaccgagttct 417

                                                                       
Query: 300 gcaagaccatcggcgctgaccccaagcagaggcagggcttgatccgcctcgccaagaaga 359
           |||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 418 gcaagaccatcggcgccgacgccaagcagaggcagggcttgatccgccttgccaagaaga 477

                                    
Query: 360 acggagagaagctcggattccttgc 384
           |||| ||||||||||| ||||||||
Sbjct: 478 acggcgagaagctcggtttccttgc 502



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 53  gctcttccgacgtggtctagctctgtgtccgg 84
           ||||| ||||||||||| ||||| ||||||||
Sbjct: 174 gctctcccgacgtggtccagctccgtgtccgg 205
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>dbj|AB218881.1| Zea mays mRNA for PGR5, complete cds
          Length = 596

 Score =  226 bits (114), Expect = 7e-56
 Identities = 195/222 (87%)
 Strand = Plus / Plus

                                                                       
Query: 163 gatgggcaatgtaaacgagggcaagggcatcttcgcgcccttggtggtggtggtgcgcaa 222
           ||||||||| || ||||| ||||||||  | ||||| ||  | || ||||||| ||||||
Sbjct: 250 gatgggcaacgtgaacgatggcaaggggctgttcgcaccgctcgtcgtggtggcgcgcaa 309

                                                                       
Query: 223 catcgttggacgcaagcgcttcaaccagctcaggggcaaggccatcgcgctgcactccca 282
           |||| |||| ||||| |||||||||||||| ||||| || || |||||||||||||| ||
Sbjct: 310 catcattggccgcaaacgcttcaaccagctgagggggaaagcaatcgcgctgcactcgca 369

                                                                       
Query: 283 ggtgatcaccgagttctgcaagaccatcggcgctgaccccaagcagaggcagggcttgat 342
           ||| |||| |||||||||||||||||||||||| ||| |||||||| |||||||| | ||
Sbjct: 370 ggtcatcaacgagttctgcaagaccatcggcgccgactccaagcagcggcagggcctcat 429

                                                     
Query: 343 ccgcctcgccaagaagaacggagagaagctcggattccttgc 384
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ccgcctcgccaagaagaacggagagaagctcggattccttgc 471



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 48  tgcgagctcttccgacgtggtctagctctgtgtccggtgacgaccac 94
           |||||||||| ||||||||||| ||||| || ||||| |||||||||
Sbjct: 120 tgcgagctctcccgacgtggtccagctcggtttccggcgacgaccac 166
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  210 bits (106), Expect = 4e-51
 Identities = 151/166 (90%)
 Strand = Plus / Plus

                                                                            
Query: 120      cggcgcggccgcggtcggcgcggccccttcggacgcccgccaggatgggcaatgtaaacg 179
                |||||||||| |||||||||||||| || ||| |||| || ||||||||||| || ||||
Sbjct: 28370829 cggcgcggcctcggtcggcgcggccactgcgggcgccggcgaggatgggcaacgtgaacg 28370888

                                                                            
Query: 180      agggcaagggcatcttcgcgcccttggtggtggtggtgcgcaacatcgttggacgcaagc 239
                |||||||||| |||||||| ||  |||||||||||||||||||||||||||| |||||||
Sbjct: 28370889 agggcaaggggatcttcgcaccggtggtggtggtggtgcgcaacatcgttggccgcaagc 28370948

                                                              
Query: 240      gcttcaaccagctcaggggcaaggccatcgcgctgcactcccaggt 285
                ||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 28370949 gcttcaaccagctcaggggaaaggccatcgcgctgcactcgcaggt 28370994



 Score =  167 bits (84), Expect = 6e-38
 Identities = 99/104 (95%)
 Strand = Plus / Plus

                                                                            
Query: 281      caggtgatcaccgagttctgcaagaccatcggcgctgaccccaagcagaggcagggcttg 340
                ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 28371180 caggtgatcaccgagttctgcaagaccatcggcgccgacgccaagcagaggcagggcttg 28371239

                                                            
Query: 341      atccgcctcgccaagaagaacggagagaagctcggattccttgc 384
                |||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 28371240 atccgccttgccaagaagaacggcgagaagctcggtttccttgc 28371283



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 53       gctcttccgacgtggtctagctctgtgtccgg 84
                ||||| ||||||||||| ||||| ||||||||
Sbjct: 28370765 gctctcccgacgtggtccagctccgtgtccgg 28370796
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>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0044E16
          Length = 153296

 Score =  210 bits (106), Expect = 4e-51
 Identities = 151/166 (90%)
 Strand = Plus / Plus

                                                                         
Query: 120   cggcgcggccgcggtcggcgcggccccttcggacgcccgccaggatgggcaatgtaaacg 179
             |||||||||| |||||||||||||| || ||| |||| || ||||||||||| || ||||
Sbjct: 99635 cggcgcggcctcggtcggcgcggccactgcgggcgccggcgaggatgggcaacgtgaacg 99694

                                                                         
Query: 180   agggcaagggcatcttcgcgcccttggtggtggtggtgcgcaacatcgttggacgcaagc 239
             |||||||||| |||||||| ||  |||||||||||||||||||||||||||| |||||||
Sbjct: 99695 agggcaaggggatcttcgcaccggtggtggtggtggtgcgcaacatcgttggccgcaagc 99754

                                                           
Query: 240   gcttcaaccagctcaggggcaaggccatcgcgctgcactcccaggt 285
             ||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 99755 gcttcaaccagctcaggggaaaggccatcgcgctgcactcgcaggt 99800



 Score =  167 bits (84), Expect = 6e-38
 Identities = 99/104 (95%)
 Strand = Plus / Plus

                                                                          
Query: 281    caggtgatcaccgagttctgcaagaccatcggcgctgaccccaagcagaggcagggcttg 340
              ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 99986  caggtgatcaccgagttctgcaagaccatcggcgccgacgccaagcagaggcagggcttg 100045

                                                          
Query: 341    atccgcctcgccaagaagaacggagagaagctcggattccttgc 384
              |||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct: 100046 atccgccttgccaagaagaacggcgagaagctcggtttccttgc 100089



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 53    gctcttccgacgtggtctagctctgtgtccgg 84
             ||||| ||||||||||| ||||| ||||||||
Sbjct: 99571 gctctcccgacgtggtccagctccgtgtccgg 99602
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>gb|AY389579.1| Hyacinthus orientalis unknown mRNA
          Length = 356

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 108/134 (80%)
 Strand = Plus / Plus

                                                                       
Query: 242 ttcaaccagctcaggggcaaggccatcgcgctgcactcccaggtgatcaccgagttctgc 301
           |||||||||||||| || |||||||| || || ||||| ||||| |||| ||||||||||
Sbjct: 96  ttcaaccagctcagaggaaaggccatagccctccactctcaggtaatcaacgagttctgc 155

                                                                       
Query: 302 aagaccatcggcgctgaccccaagcagaggcagggcttgatccgcctcgccaagaagaac 361
           ||  | || || || ||    ||||||||||| ||  |||||||  | || |||||||||
Sbjct: 156 aaatcgataggagcagatgggaagcagaggcaaggactgatccggttggcgaagaagaac 215

                         
Query: 362 ggagagaagctcgg 375
           ||||||| ||||||
Sbjct: 216 ggagagatgctcgg 229
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>dbj|AB218880.1| Portulaca oleracea mRNA for PGR5, complete cds
          Length = 636

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 263 gccatcgcgctgcactcccaggtgatcaccgagttctgcaagac 306
           |||||||| || ||||| ||||||||||| ||||||||||||||
Sbjct: 375 gccatcgctcttcactcacaggtgatcacggagttctgcaagac 418



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 353 aagaagaacggagagaagctcggattcct 381
           ||||||||||| |||||||| ||||||||
Sbjct: 465 aagaagaacggggagaagctgggattcct 493
to top
>gb|AF110789.1|AF110789 Volvox carteri f. nagariensis clone G32 unknown mRNA
          Length = 1286

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 332 cagggcttgatccgcctcgccaagaagaacggagagaagctcggattcct 381
           |||||| |||| ||||||||||||||||| || |||||||| || |||||
Sbjct: 496 cagggcgtgattcgcctcgccaagaagaatggcgagaagctgggcttcct 545
to top
>dbj|AB218882.1| Portulaca grandiflora mRNA for PGR5, complete cds
          Length = 660

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 263 gccatcgcgctgcactcccaggtgatcaccgagttctgcaagac 306
           |||||||| || ||||| ||||| ||||| ||||||||||||||
Sbjct: 356 gccatcgctcttcactcacaggtcatcacggagttctgcaagac 399
to top
>emb|BX935607.2| Gallus gallus finished cDNA, clone ChEST166e9
          Length = 878

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 322 caagcagaggcagggcttgatcc 344
           |||||||||||||||||||||||
Sbjct: 358 caagcagaggcagggcttgatcc 336
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 122     gcgcggccgcggtcggcgcggc 143
               ||||||||||||||||||||||
Sbjct: 2438524 gcgcggccgcggtcggcgcggc 2438545



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 120     cggcgcggccgcggtcggcgcggc 143
               ||||||||||||| ||||||||||
Sbjct: 1247404 cggcgcggccgcgctcggcgcggc 1247381
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 122     gcgcggccgcggtcggcgcggc 143
               ||||||||||||||||||||||
Sbjct: 3653670 gcgcggccgcggtcggcgcggc 3653691



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 120     cggcgcggccgcggtcggcgcggc 143
               ||||||||||||| ||||||||||
Sbjct: 2257994 cggcgcggccgcgctcggcgcggc 2258017
to top
>gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete sequence
          Length = 108900

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 656   ctactgatggcctcagcggtag 677
             ||||||||||||||||||||||
Sbjct: 27082 ctactgatggcctcagcggtag 27103
to top
>gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete sequence
          Length = 113345

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 656   ctactgatggcctcagcggtag 677
             ||||||||||||||||||||||
Sbjct: 82304 ctactgatggcctcagcggtag 82325
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 122     gcgcggccgcggtcggcgcggc 143
               ||||||||||||||||||||||
Sbjct: 3396378 gcgcggccgcggtcggcgcggc 3396399



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 120     cggcgcggccgcggtcggcgcggc 143
               ||||||||||||| ||||||||||
Sbjct: 2116722 cggcgcggccgcgctcggcgcggc 2116699
to top
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 123   cgcggccgcggtcggcgcggcc 144
             ||||||||||||||||||||||
Sbjct: 35740 cgcggccgcggtcggcgcggcc 35761
to top
>emb|AL672236.18| Mouse DNA sequence from clone RP23-206L21 on chromosome 11 Contains a
              ribosomal protein S6 (Rps6) pseudogene, a novel gene, the
              gene for a novel immunoglobulin domain containing protein
              and two CpG islands, complete sequence
          Length = 219893

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 320    cccaagcagaggcagggcttga 341
              ||||||||||||||||||||||
Sbjct: 173698 cccaagcagaggcagggcttga 173719
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 118     gtcggcgcggccgcggtcggcgcggc 143
               |||| |||||||||||||||||||||
Sbjct: 2430271 gtcgccgcggccgcggtcggcgcggc 2430296
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 120     cggcgcggccgcggtcggcgcg 141
               ||||||||||||||||||||||
Sbjct: 1527678 cggcgcggccgcggtcggcgcg 1527699
to top
>emb|Z35330.1|BJRIBRNA B.japonicum (110) genes for 16S, 23S, 5S ribosomal RNA, transfer
           RNA-Ala transfer RNA-Ala
          Length = 6726

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 120 cggcgcggccgcggtcggcgcg 141
           ||||||||||||||||||||||
Sbjct: 293 cggcgcggccgcggtcggcgcg 314
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 112     gtcggtgtcggcgcggccgcggtcggcgcggccc 145
               |||||||||||||| |||| ||| ||||||||||
Sbjct: 2226150 gtcggtgtcggcgccgccgtggtaggcgcggccc 2226117
to top
>emb|AJ937765.1| Uncultured candidate division OP8 bacterium fosmid clone b3cf1.2.f09
          Length = 38920

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 119  tcggcgcggccgcggtcggcgcggcc 144
            ||||||||||||||| ||||||||||
Sbjct: 3475 tcggcgcggccgcggccggcgcggcc 3500
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>gb|AC166102.2| Mus musculus BAC clone RP23-397O23 from chromosome 17, complete sequence
          Length = 204842

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 512    attgcatgcatgtatgtatac 532
              |||||||||||||||||||||
Sbjct: 150318 attgcatgcatgtatgtatac 150338
to top
>emb|CR855305.12| Zebrafish DNA sequence from clone DKEY-98F17 in linkage group 5, complete
              sequence
          Length = 155542

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 625    tggatggatggacaaatgatg 645
              |||||||||||||||||||||
Sbjct: 126024 tggatggatggacaaatgatg 126044
to top
>emb|AL117382.28|HSJ881L22 Human DNA sequence from clone RP5-881L22 on chromosome 20 Contains the
             3' end of the GDAP1L1 gene for ganglioside-induced
             differentiation-associated protein 1-like 1, the R3HDML
             gene for R3HDML domain containing-like, the C20orf142
             gene, three novel genes, the 5' end of one variant of the
             HNF4A gene for hepatocyte nuclear factor 4 and two CpG
             islands, complete sequence
          Length = 131841

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 626   ggatggatggacaaatgatgt 646
             |||||||||||||||||||||
Sbjct: 92867 ggatggatggacaaatgatgt 92887
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 120    cggcgcggccgcggtcggcgcggcc 144
              |||||||||||| ||||||||||||
Sbjct: 638683 cggcgcggccgccgtcggcgcggcc 638707
to top
>dbj|AB168805.1| Macaca fascicularis testis cDNA, clone: QtsA-14950
          Length = 1928

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 626 ggatggatggacaaatgatgt 646
           |||||||||||||||||||||
Sbjct: 602 ggatggatggacaaatgatgt 582
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 114     cggtgtcggcgcggccgcggt 134
               |||||||||||||||||||||
Sbjct: 1996715 cggtgtcggcgcggccgcggt 1996695



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 114     cggtgtcggcgcggccgcggtcgg 137
               ||||||||||||||| ||||||||
Sbjct: 3960304 cggtgtcggcgcggctgcggtcgg 3960281
to top
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 123    cgcggccgcggtcggcgcggc 143
              |||||||||||||||||||||
Sbjct: 802848 cgcggccgcggtcggcgcggc 802828
to top
>ref|NM_101194.2| Arabidopsis thaliana unknown protein AT1G13220 transcript variant
            AT1G13220.2 mRNA, complete cds
          Length = 3600

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 483  gctcttctatctttccttggagtt 506
            ||||||||||||||| ||||||||
Sbjct: 1231 gctcttctatctttctttggagtt 1208
to top
>gb|AC109498.10| Mus musculus chromosome 5, clone RP23-22K24, complete sequence
          Length = 218246

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   tgcatgcatgtatgtatact 533
             ||||||||||||||||||||
Sbjct: 23512 tgcatgcatgtatgtatact 23531
to top
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 114     cggtgtcggcgcggccgcggtcggcgcg 141
               |||| ||||||||||||||| |||||||
Sbjct: 1522353 cggtatcggcgcggccgcgggcggcgcg 1522380
to top
>gb|AC124629.11| Mus musculus chromosome 7, clone RP23-437A23, complete sequence
          Length = 195322

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 513   ttgcatgcatgtatgtatac 532
             ||||||||||||||||||||
Sbjct: 75265 ttgcatgcatgtatgtatac 75284
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 117    tgtcggcgcggccgcggtcggcgc 140
              |||||||||| |||||||||||||
Sbjct: 822258 tgtcggcgcgaccgcggtcggcgc 822281
to top
>gb|AC150554.1| Drosophila melanogaster clone BACR21O10, complete sequence
          Length = 193926

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   tttccttggagttgggagat 513
             ||||||||||||||||||||
Sbjct: 25058 tttccttggagttgggagat 25039
to top
>ref|XM_960350.1| Neurospora crassa OR74A hypothetical protein (NCU02670.1) partial
            mRNA
          Length = 2868

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  cgcccttggtggtggtggtg 217
            ||||||||||||||||||||
Sbjct: 2742 cgcccttggtggtggtggtg 2761
to top
>ref|XM_331868.1| Neurospora crassa OR74A hypothetical protein (NCU02670.1) partial
            mRNA
          Length = 2868

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 198  cgcccttggtggtggtggtg 217
            ||||||||||||||||||||
Sbjct: 2742 cgcccttggtggtggtggtg 2761
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 121     ggcgcggccgcggtcggcgcggcc 144
               ||||||||||||| ||||||||||
Sbjct: 1699668 ggcgcggccgcgggcggcgcggcc 1699691
to top
>gb|AC158301.4| Mus musculus chromosome 5, clone RP24-71D19, complete sequence
          Length = 234479

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 514    tgcatgcatgtatgtatact 533
              ||||||||||||||||||||
Sbjct: 154400 tgcatgcatgtatgtatact 154419
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 204     tggtggtggtggtgcgcaac 223
               ||||||||||||||||||||
Sbjct: 1577363 tggtggtggtggtgcgcaac 1577344
to top
>gb|AC126807.4| Mus musculus BAC clone RP23-306D4 from chromosome 18, complete sequence
          Length = 244566

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   tgcatgcatgtatgtatact 533
             ||||||||||||||||||||
Sbjct: 55815 tgcatgcatgtatgtatact 55796
to top
>gb|AC124202.3| Mus musculus BAC clone RP23-337F21 from chromosome 14, complete sequence
          Length = 189556

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 626    ggatggatggacaaatgatg 645
              ||||||||||||||||||||
Sbjct: 122166 ggatggatggacaaatgatg 122185
to top
>gb|AC125229.3| Mus musculus BAC clone RP23-45P1 from 5, complete sequence
          Length = 167771

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   tgcatgcatgtatgtatact 533
             ||||||||||||||||||||
Sbjct: 38618 tgcatgcatgtatgtatact 38637
to top
>gb|AC116571.5| Mus musculus BAC clone RP23-97B18 from 6, complete sequence
          Length = 113258

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 514   tgcatgcatgtatgtatact 533
             ||||||||||||||||||||
Sbjct: 27596 tgcatgcatgtatgtatact 27615
to top
>emb|BX649266.9| Zebrafish DNA sequence from clone DKEY-19J7 in linkage group 9, complete
              sequence
          Length = 235135

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 625    tggatggatggacaaatgat 644
              ||||||||||||||||||||
Sbjct: 178286 tggatggatggacaaatgat 178267
to top
>emb|AL022334.1|HS569D19 Human DNA sequence from clone RP4-569D19 on chromosome 22q13.1,
             complete sequence
          Length = 114771

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 394   caatcaccccttccttctcc 413
             ||||||||||||||||||||
Sbjct: 69762 caatcaccccttccttctcc 69743
to top
>gb|AC013791.9| Homo sapiens chromosome 11, clone RP11-19N21, complete sequence
          Length = 174569

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      agaagaggaaggagagcaga 21
              ||||||||||||||||||||
Sbjct: 143450 agaagaggaaggagagcaga 143431
to top
>gb|AF332698.1| Sus scrofa CD47 antigen/integrin-associated protein (CD47/IAP)
           mRNA, complete cds
          Length = 2759

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 199 gcccttggtggtggtggtgc 218
           ||||||||||||||||||||
Sbjct: 127 gcccttggtggtggtggtgc 146
to top
>emb|BX842634.1| Neurospora crassa DNA linkage group I BAC contig B16B8
          Length = 138191

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 198   cgcccttggtggtggtggtg 217
             ||||||||||||||||||||
Sbjct: 75970 cgcccttggtggtggtggtg 75951
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 121     ggcgcggccgcggtcggcgcggcc 144
               ||||||||||||| ||||||||||
Sbjct: 3034570 ggcgcggccgcgggcggcgcggcc 3034593
to top
>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24
          Length = 304450

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   tcggcgcggccgcggtcggcgcgg 142
             |||||||||||||||||| |||||
Sbjct: 14073 tcggcgcggccgcggtcgccgcgg 14050
to top
>emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene
          Length = 404123

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      agaagaggaaggagagcaga 21
              ||||||||||||||||||||
Sbjct: 353859 agaagaggaaggagagcaga 353878
to top
>emb|BX005080.7| Mouse DNA sequence from clone RP23-333M14 on chromosome 11, complete
             sequence
          Length = 129196

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 513   ttgcatgcatgtatgtatac 532
             ||||||||||||||||||||
Sbjct: 71867 ttgcatgcatgtatgtatac 71848
to top
>gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, complete sequence
          Length = 181025

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     agaagaggaaggagagcaga 21
             ||||||||||||||||||||
Sbjct: 28957 agaagaggaaggagagcaga 28938
to top
>gb|AE012532.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 440
            of 460 of the complete genome
          Length = 10505

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 104  ctggccatgtcggtgtcggcgcgg 127
            ||||||| ||||||||||||||||
Sbjct: 2868 ctggccaggtcggtgtcggcgcgg 2845
to top
>gb|AE012228.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 136
            of 460 of the complete genome
          Length = 11820

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 204  tggtggtggtggtgcgcaac 223
            ||||||||||||||||||||
Sbjct: 9139 tggtggtggtggtgcgcaac 9120
to top
>gb|AC027796.9| Homo sapiens chromosome 17, clone RP11-235E17, complete sequence
          Length = 127431

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 625    tggatggatggacaaatgatgtat 648
              |||||||||||||| |||||||||
Sbjct: 112976 tggatggatggacagatgatgtat 112953
to top
>gb|AC161418.4| Mus musculus BAC clone RP23-325K2 from chromosome 3, complete sequence
          Length = 202765

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    attgcatgcatgtatgtata 531
              ||||||||||||||||||||
Sbjct: 140841 attgcatgcatgtatgtata 140822
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 104     ctggccatgtcggtgtcggcgcgg 127
               ||||||| ||||||||||||||||
Sbjct: 4935927 ctggccaggtcggtgtcggcgcgg 4935904



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 204     tggtggtggtggtgcgcaac 223
               ||||||||||||||||||||
Sbjct: 3532448 tggtggtggtggtgcgcaac 3532467
to top
>gb|AC005950.1|AC005950 Homo sapiens Chromosome 11p15.5 PAC clone pDJ754h15 containing
            cdk-inhibitor p57/KIP2 (CDKN1C) gene, complete sequence
          Length = 137932

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    agaagaggaaggagagcaga 21
            ||||||||||||||||||||
Sbjct: 2499 agaagaggaaggagagcaga 2518
to top
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 121     ggcgcggccgcggtcggcgcggcc 144
               ||||||||||||| ||||||||||
Sbjct: 2183380 ggcgcggccgcgggcggcgcggcc 2183403
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>gb|AC160000.9| Mus musculus 6 BAC RP24-340J19 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 198476

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 514    tgcatgcatgtatgtatact 533
              ||||||||||||||||||||
Sbjct: 194064 tgcatgcatgtatgtatact 194083
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>gb|AC007984.4|AC007984 Drosophila melanogaster, chromosome 3R, region 97D-97E, BAC clone
              BACR05C10, complete sequence
          Length = 174894

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 494    tttccttggagttgggagat 513
              ||||||||||||||||||||
Sbjct: 134170 tttccttggagttgggagat 134151
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>gb|AC159372.1| Mus musculus BAC clone RP24-285I4 from chromosome 9, complete sequence
          Length = 171391

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 512   attgcatgcatgtatgtata 531
             ||||||||||||||||||||
Sbjct: 47629 attgcatgcatgtatgtata 47610
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>gb|AF270494.2|AF270494 Sus scrofa CD47 antigen/integrin-associated protein (CD47/IAP)
           mRNA, complete cds
          Length = 1402

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 199 gcccttggtggtggtggtgc 218
           ||||||||||||||||||||
Sbjct: 127 gcccttggtggtggtggtgc 146
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>ref|NM_213982.1| Sus scrofa CD47 antigen/integrin-associated protein (CD47/IAP),
           mRNA
          Length = 2759

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 199 gcccttggtggtggtggtgc 218
           ||||||||||||||||||||
Sbjct: 127 gcccttggtggtggtggtgc 146
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>gb|AC096632.3| Homo sapiens chromosome 1 clone RP11-38O14, complete sequence
          Length = 159539

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 404    ttccttctcctacccttttctact 427
              ||||||||||||||| ||||||||
Sbjct: 101840 ttccttctcctacccctttctact 101863
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>gb|AC138117.4| Mus musculus BAC clone RP24-146K16 from chromosome 6, complete sequence
          Length = 230020

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 514    tgcatgcatgtatgtatact 533
              ||||||||||||||||||||
Sbjct: 115830 tgcatgcatgtatgtatact 115849
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>gb|AY941330.1| Lycopersicon peruvianum putative sterol C-14 reductase (CT143)
           gene, CT143-7235b allele, partial cds
          Length = 1804

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 406 ccttctcctacccttttcta 425
           ||||||||||||||||||||
Sbjct: 464 ccttctcctacccttttcta 445
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>dbj|AB109116.1| Streptomyces griseus SsgB mRNA, complete cds
          Length = 1248

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 124  gcggccgcggtcggcgcggc 143
            ||||||||||||||||||||
Sbjct: 1126 gcggccgcggtcggcgcggc 1145
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 119     tcggcgcggccgcggtcggcgcgg 142
               |||||||||||| |||||||||||
Sbjct: 2555031 tcggcgcggccgaggtcggcgcgg 2555054



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 119     tcggcgcggccgcggtcggcgcgg 142
               ||||||||||||||| ||||||||
Sbjct: 2444417 tcggcgcggccgcggccggcgcgg 2444394
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>gb|AC145072.9| Mus musculus chromosome 5, clone RP24-94L5, complete sequence
          Length = 217930

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    cgcccttggtggtggtggtg 217
              ||||||||||||||||||||
Sbjct: 172987 cgcccttggtggtggtggtg 173006
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>gb|AF117314.1|AF117314 Meriones unguiculatus prion protein (PrP) gene, partial cds
          Length = 759

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 198 cgcccttggtggtggtggtg 217
           ||||||||||||||||||||
Sbjct: 583 cgcccttggtggtggtggtg 564
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>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence
          Length = 99758

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 483   gctcttctatctttccttggagtt 506
             ||||||||||||||| ||||||||
Sbjct: 90388 gctcttctatctttctttggagtt 90365
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>gb|AE003759.3| Drosophila melanogaster chromosome 3R, section 97 of 118 of the
             complete sequence
          Length = 222554

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   tttccttggagttgggagat 513
             ||||||||||||||||||||
Sbjct: 23723 tttccttggagttgggagat 23704
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 178     cgagggcaagggcatcttcgcgcc 201
               |||| |||||||||||||||||||
Sbjct: 1253026 cgagcgcaagggcatcttcgcgcc 1253049
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>gb|AC003675.1|AC003675 Human Chromosome 11p15.5 P1 - 6959, complete sequence
          Length = 86621

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     agaagaggaaggagagcaga 21
             ||||||||||||||||||||
Sbjct: 45916 agaagaggaaggagagcaga 45935
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>gb|AC142414.3| Mus musculus BAC clone RP23-372N15 from 8, complete sequence
          Length = 192261

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 627    gatggatggacaaatgatgt 646
              ||||||||||||||||||||
Sbjct: 144111 gatggatggacaaatgatgt 144130
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>emb|AL732568.8| Mouse DNA sequence from clone RP23-469G19 on chromosome 4, complete
              sequence
          Length = 169474

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 514    tgcatgcatgtatgtatact 533
              ||||||||||||||||||||
Sbjct: 155003 tgcatgcatgtatgtatact 155022
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>gb|AC101869.13| Mus musculus chromosome 1, clone RP23-348D4, complete sequence
          Length = 206095

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 514   tgcatgcatgtatgtatact 533
             ||||||||||||||||||||
Sbjct: 43844 tgcatgcatgtatgtatact 43825
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>emb|AL772292.10| Mouse DNA sequence from clone RP23-109C16 on chromosome 2, complete
              sequence
          Length = 201671

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 394    caatcaccccttccttctcc 413
              ||||||||||||||||||||
Sbjct: 162422 caatcaccccttccttctcc 162441


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,349,995
Number of Sequences: 3902068
Number of extensions: 6349995
Number of successful extensions: 270209
Number of sequences better than 10.0: 83
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 267847
Number of HSP's gapped (non-prelim): 2362
length of query: 677
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 654
effective length of database: 17,143,297,704
effective search space: 11211716698416
effective search space used: 11211716698416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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