ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal29f03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK064822.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F01, full insert sequence Length = 2516 Score = 488 bits (246), Expect = e-134 Identities = 459/530 (86%) Strand = Plus / Plus Query: 66 gctttctgttacgcggagcttgctagccgctgcccttccgcgggaagcgcctaccactac 125 ||||||||||| || ||||||||||| ||||||||||| || ||||| |||||||| || Sbjct: 494 gctttctgttatgcagagcttgctagtcgctgcccttctgcaggaagtgcctaccattat 553 Query: 126 tcgtacatctgcgtcggcgaaggagttgcatggttgatcggctgggctttgatactggag 185 |||||||||||||| |||||||||||||||||| |||| || ||||| ||||||||||| Sbjct: 554 tcgtacatctgcgttggcgaaggagttgcatggctgattggttgggcattgatactggaa 613 Query: 186 tatacgattggcggatcagccgttgcccgcggcatatcacccaatctagcgttatttttc 245 || || || ||||||||||| |||||||| ||||| || |||||||| || |||||||| Sbjct: 614 tacaccatcggcggatcagctgttgcccgtggcatttctcccaatctggctttatttttt 673 Query: 246 ggaggaccaaatagtctgccatggattctggcacgccatgagctcccatggttagatgtt 305 ||||||| ||||||| |||||| || | |||||||||||||| |||||||| |||||| Sbjct: 674 ggaggacaggatagtctaccatggtttttagcacgccatgagcttccatggtttgatgtt 733 Query: 306 gttgttgatccttgtgctgctgccttggttttccttgtcactgccctgttgtgcgtcggg 365 ||||| ||||||||||| ||| | ||||| || ||||||| ||| || | ||| ||| Sbjct: 734 gttgtcgatccttgtgcggctttcctggttctcgttgtcaccgccttgctatgcaagggg 793 Query: 366 ataaaagagagtacattcgtgcaaggaattgtgactgtcctgaactgctgcgtgatgcta 425 ||||||||||| |||| || |||||| ||||||| ||||| || |||| |||||||||| Sbjct: 794 ataaaagagagctcatttgtacaaggagttgtgacagtcctaaattgcttcgtgatgcta 853 Query: 426 tttgttatcatagctggcagttacatcggcttccaaacaggatgggtcggctacaaggtg 485 |||||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 854 tttgttattatagccggcagttacattggcttccaaacaggatgggtcggctataaggtg 913 Query: 486 tctggcggatttctgccatatggggtgaatggaatgcttgctggctcagcaaccgttttc 545 ||||||| ||| | || ||||||| ||| |||||||||||||| |||||||| |||||| Sbjct: 914 gctggcgggtttttcccttatggggcgaacggaatgcttgctgggtcagcaactgttttc 973 Query: 546 tttgcctacataggctttgattcagttgctagcactgctgaagaggtgaa 595 |||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 974 tttgcctacataggctttgattcagttgctagcactgccgaggaggtgaa 1023
>dbj|AK059703.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D03, full insert sequence Length = 2272 Score = 488 bits (246), Expect = e-134 Identities = 459/530 (86%) Strand = Plus / Plus Query: 66 gctttctgttacgcggagcttgctagccgctgcccttccgcgggaagcgcctaccactac 125 ||||||||||| || ||||||||||| ||||||||||| || ||||| |||||||| || Sbjct: 250 gctttctgttatgcagagcttgctagtcgctgcccttctgcaggaagtgcctaccattat 309 Query: 126 tcgtacatctgcgtcggcgaaggagttgcatggttgatcggctgggctttgatactggag 185 |||||||||||||| |||||||||||||||||| |||| || ||||| ||||||||||| Sbjct: 310 tcgtacatctgcgttggcgaaggagttgcatggctgattggttgggcattgatactggaa 369 Query: 186 tatacgattggcggatcagccgttgcccgcggcatatcacccaatctagcgttatttttc 245 || || || ||||||||||| |||||||| ||||| || |||||||| || |||||||| Sbjct: 370 tacaccatcggcggatcagctgttgcccgtggcatttctcccaatctggctttatttttt 429 Query: 246 ggaggaccaaatagtctgccatggattctggcacgccatgagctcccatggttagatgtt 305 ||||||| ||||||| |||||| || | |||||||||||||| |||||||| |||||| Sbjct: 430 ggaggacaggatagtctaccatggtttttagcacgccatgagcttccatggtttgatgtt 489 Query: 306 gttgttgatccttgtgctgctgccttggttttccttgtcactgccctgttgtgcgtcggg 365 ||||| ||||||||||| ||| | ||||| || ||||||| ||| || | ||| ||| Sbjct: 490 gttgtcgatccttgtgcggctttcctggttctcgttgtcaccgccttgctatgcaagggg 549 Query: 366 ataaaagagagtacattcgtgcaaggaattgtgactgtcctgaactgctgcgtgatgcta 425 ||||||||||| |||| || |||||| ||||||| ||||| || |||| |||||||||| Sbjct: 550 ataaaagagagctcatttgtacaaggagttgtgacagtcctaaattgcttcgtgatgcta 609 Query: 426 tttgttatcatagctggcagttacatcggcttccaaacaggatgggtcggctacaaggtg 485 |||||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 610 tttgttattatagccggcagttacattggcttccaaacaggatgggtcggctataaggtg 669 Query: 486 tctggcggatttctgccatatggggtgaatggaatgcttgctggctcagcaaccgttttc 545 ||||||| ||| | || ||||||| ||| |||||||||||||| |||||||| |||||| Sbjct: 670 gctggcgggtttttcccttatggggcgaacggaatgcttgctgggtcagcaactgttttc 729 Query: 546 tttgcctacataggctttgattcagttgctagcactgctgaagaggtgaa 595 |||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct: 730 tttgcctacataggctttgattcagttgctagcactgccgaggaggtgaa 779
>ref|XM_469061.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2208 Score = 165 bits (83), Expect = 2e-37 Identities = 263/323 (81%) Strand = Plus / Plus Query: 55 ccgcgctttcggctttctgttacgcggagcttgctagccgctgcccttccgcgggaagcg 114 ||||||| || || |||||||| || ||||||||||| || ||||| || || ||||||| Sbjct: 287 ccgcgctctcagccttctgttatgccgagcttgctagtcggtgcccatctgctggaagcg 346 Query: 115 cctaccactactcgtacatctgcgtcggcgaaggagttgcatggttgatcggctgggctt 174 ||||||| || || ||||||||||| || ||||| ||||| |||||||| || ||||||| Sbjct: 347 cctaccattattcatacatctgcgttggtgaaggtgttgcctggttgattggttgggctt 406 Query: 175 tgatactggagtatacgattggcggatcagccgttgcccgcggcatatcacccaatctag 234 | | ||||| ||||| ||||| ||||| || |||||||| |||||||| |||||||| | Sbjct: 407 tagtgctggaatatactattggtggatctgctgttgcccgtggcatatcccccaatcttg 466 Query: 235 cgttatttttcggaggaccaaatagtctgccatggattctggcacgccatgagctcccat 294 | || || || ||||||||| | ||||| ||||||||| | ||||||| |||| |||| Sbjct: 467 ccttgttctttggaggaccagacagtcttccatggattttatcacgccaccagcttccat 526 Query: 295 ggttagatgttgttgttgatccttgtgctgctgccttggttttccttgtcactgccctgt 354 |||| ||||| |||||||||| ||||| |||||| | ||||| |||| |||| || Sbjct: 527 ggtttgatgtcattgttgatccctgtgccgctgccctcgtttttgttgttactgttttgc 586 Query: 355 tgtgcgtcgggataaaagagagt 377 | || || ||||||||||||||| Sbjct: 587 tatgtgttgggataaaagagagt 609 Score = 139 bits (70), Expect = 1e-29 Identities = 154/182 (84%) Strand = Plus / Plus Query: 417 gtgatgctatttgttatcatagctggcagttacatcggcttccaaacaggatgggtcggc 476 |||||| |||||||||| ||||||| ||||| ||||||||||| | ||||||||| ||| Sbjct: 649 gtgatgatatttgttattgtagctggtagttatatcggcttccagataggatgggttggc 708 Query: 477 tacaaggtgtctggcggatttctgccatatggggtgaatggaatgcttgctggctcagca 536 || || || ||| |||| | | ||| ||||| | ||||||||||||||||| |||||| Sbjct: 709 tataaagttactgatggatattttccacatgggataaatggaatgcttgctggatcagca 768 Query: 537 accgttttctttgcctacataggctttgattcagttgctagcactgctgaagaggtgaag 596 || ||||||||||| || || ||||||||| |||||||||| |||||||| ||||||||| Sbjct: 769 actgttttctttgcatatattggctttgatacagttgctagtactgctgaggaggtgaag 828 Query: 597 aa 598 || Sbjct: 829 aa 830
>dbj|AK066471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066A08, full insert sequence Length = 2110 Score = 165 bits (83), Expect = 2e-37 Identities = 263/323 (81%) Strand = Plus / Plus Query: 55 ccgcgctttcggctttctgttacgcggagcttgctagccgctgcccttccgcgggaagcg 114 ||||||| || || |||||||| || ||||||||||| || ||||| || || ||||||| Sbjct: 196 ccgcgctctcagccttctgttatgccgagcttgctagtcggtgcccatctgctggaagcg 255 Query: 115 cctaccactactcgtacatctgcgtcggcgaaggagttgcatggttgatcggctgggctt 174 ||||||| || || ||||||||||| || ||||| ||||| |||||||| || ||||||| Sbjct: 256 cctaccattattcatacatctgcgttggtgaaggtgttgcctggttgattggttgggctt 315 Query: 175 tgatactggagtatacgattggcggatcagccgttgcccgcggcatatcacccaatctag 234 | | ||||| ||||| ||||| ||||| || |||||||| |||||||| |||||||| | Sbjct: 316 tagtgctggaatatactattggtggatctgctgttgcccgtggcatatcccccaatcttg 375 Query: 235 cgttatttttcggaggaccaaatagtctgccatggattctggcacgccatgagctcccat 294 | || || || ||||||||| | ||||| ||||||||| | ||||||| |||| |||| Sbjct: 376 ccttgttctttggaggaccagacagtcttccatggattttatcacgccaccagcttccat 435 Query: 295 ggttagatgttgttgttgatccttgtgctgctgccttggttttccttgtcactgccctgt 354 |||| ||||| |||||||||| ||||| |||||| | ||||| |||| |||| || Sbjct: 436 ggtttgatgtcattgttgatccctgtgccgctgccctcgtttttgttgttactgttttgc 495 Query: 355 tgtgcgtcgggataaaagagagt 377 | || || ||||||||||||||| Sbjct: 496 tatgtgttgggataaaagagagt 518 Score = 139 bits (70), Expect = 1e-29 Identities = 154/182 (84%) Strand = Plus / Plus Query: 417 gtgatgctatttgttatcatagctggcagttacatcggcttccaaacaggatgggtcggc 476 |||||| |||||||||| ||||||| ||||| ||||||||||| | ||||||||| ||| Sbjct: 558 gtgatgatatttgttattgtagctggtagttatatcggcttccagataggatgggttggc 617 Query: 477 tacaaggtgtctggcggatttctgccatatggggtgaatggaatgcttgctggctcagca 536 || || || ||| |||| | | ||| ||||| | ||||||||||||||||| |||||| Sbjct: 618 tataaagttactgatggatattttccacatgggataaatggaatgcttgctggatcagca 677 Query: 537 accgttttctttgcctacataggctttgattcagttgctagcactgctgaagaggtgaag 596 || ||||||||||| || || ||||||||| |||||||||| |||||||| ||||||||| Sbjct: 678 actgttttctttgcatatattggctttgatacagttgctagtactgctgaggaggtgaag 737 Query: 597 aa 598 || Sbjct: 738 aa 739
>dbj|AK066436.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063A11, full insert sequence Length = 2455 Score = 165 bits (83), Expect = 2e-37 Identities = 263/323 (81%) Strand = Plus / Plus Query: 55 ccgcgctttcggctttctgttacgcggagcttgctagccgctgcccttccgcgggaagcg 114 ||||||| || || |||||||| || ||||||||||| || ||||| || || ||||||| Sbjct: 551 ccgcgctctcagccttctgttatgccgagcttgctagtcggtgcccatctgctggaagcg 610 Query: 115 cctaccactactcgtacatctgcgtcggcgaaggagttgcatggttgatcggctgggctt 174 ||||||| || || ||||||||||| || ||||| ||||| |||||||| || ||||||| Sbjct: 611 cctaccattattcatacatctgcgttggtgaaggtgttgcctggttgattggttgggctt 670 Query: 175 tgatactggagtatacgattggcggatcagccgttgcccgcggcatatcacccaatctag 234 | | ||||| ||||| ||||| ||||| || |||||||| |||||||| |||||||| | Sbjct: 671 tagtgctggaatatactattggtggatctgctgttgcccgtggcatatcccccaatcttg 730 Query: 235 cgttatttttcggaggaccaaatagtctgccatggattctggcacgccatgagctcccat 294 | || || || ||||||||| | ||||| ||||||||| | ||||||| |||| |||| Sbjct: 731 ccttgttctttggaggaccagacagtcttccatggattttatcacgccaccagcttccat 790 Query: 295 ggttagatgttgttgttgatccttgtgctgctgccttggttttccttgtcactgccctgt 354 |||| ||||| |||||||||| ||||| |||||| | ||||| |||| |||| || Sbjct: 791 ggtttgatgtcattgttgatccctgtgccgctgccctcgtttttgttgttactgttttgc 850 Query: 355 tgtgcgtcgggataaaagagagt 377 | || || ||||||||||||||| Sbjct: 851 tatgtgttgggataaaagagagt 873 Score = 139 bits (70), Expect = 1e-29 Identities = 154/182 (84%) Strand = Plus / Plus Query: 417 gtgatgctatttgttatcatagctggcagttacatcggcttccaaacaggatgggtcggc 476 |||||| |||||||||| ||||||| ||||| ||||||||||| | ||||||||| ||| Sbjct: 913 gtgatgatatttgttattgtagctggtagttatatcggcttccagataggatgggttggc 972 Query: 477 tacaaggtgtctggcggatttctgccatatggggtgaatggaatgcttgctggctcagca 536 || || || ||| |||| | | ||| ||||| | ||||||||||||||||| |||||| Sbjct: 973 tataaagttactgatggatattttccacatgggataaatggaatgcttgctggatcagca 1032 Query: 537 accgttttctttgcctacataggctttgattcagttgctagcactgctgaagaggtgaag 596 || ||||||||||| || || ||||||||| |||||||||| |||||||| ||||||||| Sbjct: 1033 actgttttctttgcatatattggctttgatacagttgctagtactgctgaggaggtgaag 1092 Query: 597 aa 598 || Sbjct: 1093 aa 1094
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 133 bits (67), Expect = 7e-28 Identities = 97/107 (90%) Strand = Plus / Minus Query: 387 caaggaattgtgactgtcctgaactgctgcgtgatgctatttgttatcatagctggcagt 446 |||||| ||||||| ||||| || |||| |||||||||||||||||| ||||| |||||| Sbjct: 26657756 caaggagttgtgacagtcctaaattgcttcgtgatgctatttgttattatagccggcagt 26657697 Query: 447 tacatcggcttccaaacaggatgggtcggctacaaggtgtctggcgg 493 ||||| |||||||||||||||||||||||||| |||||| ||||||| Sbjct: 26657696 tacattggcttccaaacaggatgggtcggctataaggtggctggcgg 26657650 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 504 tatggggtgaatggaatgcttgctggctcagcaaccgttttctttgcctacataggcttt 563 ||||||| ||| |||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 26657558 tatggggcgaacggaatgcttgctgggtcagcaactgttttctttgcctacataggcttt 26657499 Query: 564 gattcagttgctagcactgctgaagaggt 592 |||||||||||||||||||| || ||||| Sbjct: 26657498 gattcagttgctagcactgccgaggaggt 26657470 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 66 gctttctgttacgcggagcttgctagccgctgcccttccgcgggaagcgcctaccactac 125 ||||||||||| || ||||||||||| ||||||||||| || ||||| |||||||| || Sbjct: 26658369 gctttctgttatgcagagcttgctagtcgctgcccttctgcaggaagtgcctaccattat 26658310 Query: 126 tcgtacatctgcgtcggcgaagg 148 |||||||||||||| |||||||| Sbjct: 26658309 tcgtacatctgcgttggcgaagg 26658287 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 237 ttatttttcggaggaccaaatagtctgccatggattctggcacgccatgagctcccatgg 296 |||||||| ||||||| ||||||| |||||| || | |||||||||||||| |||||| Sbjct: 26657997 ttattttttggaggacaggatagtctaccatggtttttagcacgccatgagcttccatgg 26657938 Query: 297 ttagatgttgttgttgatccttgtgc 322 || ||||||||||| ||||||||||| Sbjct: 26657937 tttgatgttgttgtcgatccttgtgc 26657912 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 148 gagttgcatggttgatcggctgggctttgatactggagtatacgattggcggatcagccg 207 ||||||||||| |||| || ||||| ||||||||||| || || || ||||||||||| | Sbjct: 26658185 gagttgcatggctgattggttgggcattgatactggaatacaccatcggcggatcagctg 26658126 Query: 208 ttgcccgcggcatatcacccaatct 232 ||||||| ||||| || |||||||| Sbjct: 26658125 ttgcccgtggcatttctcccaatct 26658101
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 133 bits (67), Expect = 7e-28 Identities = 97/107 (90%) Strand = Plus / Minus Query: 387 caaggaattgtgactgtcctgaactgctgcgtgatgctatttgttatcatagctggcagt 446 |||||| ||||||| ||||| || |||| |||||||||||||||||| ||||| |||||| Sbjct: 26585925 caaggagttgtgacagtcctaaattgcttcgtgatgctatttgttattatagccggcagt 26585866 Query: 447 tacatcggcttccaaacaggatgggtcggctacaaggtgtctggcgg 493 ||||| |||||||||||||||||||||||||| |||||| ||||||| Sbjct: 26585865 tacattggcttccaaacaggatgggtcggctataaggtggctggcgg 26585819 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 504 tatggggtgaatggaatgcttgctggctcagcaaccgttttctttgcctacataggcttt 563 ||||||| ||| |||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 26585727 tatggggcgaacggaatgcttgctgggtcagcaactgttttctttgcctacataggcttt 26585668 Query: 564 gattcagttgctagcactgctgaagaggt 592 |||||||||||||||||||| || ||||| Sbjct: 26585667 gattcagttgctagcactgccgaggaggt 26585639 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 66 gctttctgttacgcggagcttgctagccgctgcccttccgcgggaagcgcctaccactac 125 ||||||||||| || ||||||||||| ||||||||||| || ||||| |||||||| || Sbjct: 26586538 gctttctgttatgcagagcttgctagtcgctgcccttctgcaggaagtgcctaccattat 26586479 Query: 126 tcgtacatctgcgtcggcgaagg 148 |||||||||||||| |||||||| Sbjct: 26586478 tcgtacatctgcgttggcgaagg 26586456 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 237 ttatttttcggaggaccaaatagtctgccatggattctggcacgccatgagctcccatgg 296 |||||||| ||||||| ||||||| |||||| || | |||||||||||||| |||||| Sbjct: 26586166 ttattttttggaggacaggatagtctaccatggtttttagcacgccatgagcttccatgg 26586107 Query: 297 ttagatgttgttgttgatccttgtgc 322 || ||||||||||| ||||||||||| Sbjct: 26586106 tttgatgttgttgtcgatccttgtgc 26586081 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 148 gagttgcatggttgatcggctgggctttgatactggagtatacgattggcggatcagccg 207 ||||||||||| |||| || ||||| ||||||||||| || || || ||||||||||| | Sbjct: 26586354 gagttgcatggctgattggttgggcattgatactggaatacaccatcggcggatcagctg 26586295 Query: 208 ttgcccgcggcatatcacccaatct 232 ||||||| ||||| || |||||||| Sbjct: 26586294 ttgcccgtggcatttctcccaatct 26586270
>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101173 Score = 133 bits (67), Expect = 7e-28 Identities = 97/107 (90%) Strand = Plus / Minus Query: 387 caaggaattgtgactgtcctgaactgctgcgtgatgctatttgttatcatagctggcagt 446 |||||| ||||||| ||||| || |||| |||||||||||||||||| ||||| |||||| Sbjct: 76626 caaggagttgtgacagtcctaaattgcttcgtgatgctatttgttattatagccggcagt 76567 Query: 447 tacatcggcttccaaacaggatgggtcggctacaaggtgtctggcgg 493 ||||| |||||||||||||||||||||||||| |||||| ||||||| Sbjct: 76566 tacattggcttccaaacaggatgggtcggctataaggtggctggcgg 76520 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Minus Query: 504 tatggggtgaatggaatgcttgctggctcagcaaccgttttctttgcctacataggcttt 563 ||||||| ||| |||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 76428 tatggggcgaacggaatgcttgctgggtcagcaactgttttctttgcctacataggcttt 76369 Query: 564 gattcagttgctagcactgctgaagaggt 592 |||||||||||||||||||| || ||||| Sbjct: 76368 gattcagttgctagcactgccgaggaggt 76340 Score = 93.7 bits (47), Expect = 6e-16 Identities = 74/83 (89%) Strand = Plus / Minus Query: 66 gctttctgttacgcggagcttgctagccgctgcccttccgcgggaagcgcctaccactac 125 ||||||||||| || ||||||||||| ||||||||||| || ||||| |||||||| || Sbjct: 77239 gctttctgttatgcagagcttgctagtcgctgcccttctgcaggaagtgcctaccattat 77180 Query: 126 tcgtacatctgcgtcggcgaagg 148 |||||||||||||| |||||||| Sbjct: 77179 tcgtacatctgcgttggcgaagg 77157 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 237 ttatttttcggaggaccaaatagtctgccatggattctggcacgccatgagctcccatgg 296 |||||||| ||||||| ||||||| |||||| || | |||||||||||||| |||||| Sbjct: 76867 ttattttttggaggacaggatagtctaccatggtttttagcacgccatgagcttccatgg 76808 Query: 297 ttagatgttgttgttgatccttgtgc 322 || ||||||||||| ||||||||||| Sbjct: 76807 tttgatgttgttgtcgatccttgtgc 76782 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 148 gagttgcatggttgatcggctgggctttgatactggagtatacgattggcggatcagccg 207 ||||||||||| |||| || ||||| ||||||||||| || || || ||||||||||| | Sbjct: 77055 gagttgcatggctgattggttgggcattgatactggaatacaccatcggcggatcagctg 76996 Query: 208 ttgcccgcggcatatcacccaatct 232 ||||||| ||||| || |||||||| Sbjct: 76995 ttgcccgtggcatttctcccaatct 76971
>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01, complete sequence Length = 161741 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 513 aatggaatgcttgctggctcagcaaccgttttctttgcctacataggctttgattcagtt 572 ||||||||||||||||| |||||||| ||||||||||| || || ||||||||| ||||| Sbjct: 116981 aatggaatgcttgctggatcagcaactgttttctttgcatatattggctttgatacagtt 116922 Query: 573 gctagcactgctgaagaggtgaaga 597 ||||| |||||||| ||||| |||| Sbjct: 116921 gctagtactgctgaggaggttaaga 116897 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 55 ccgcgctttcggctttctgttacgcggagcttgctagccgctgcccttccgcgggaagcg 114 ||||||| || || |||||||| || ||||||||||| || ||||| || || ||||||| Sbjct: 117880 ccgcgctctcagccttctgttatgccgagcttgctagtcggtgcccatctgctggaagcg 117821 Query: 115 cctaccactactcgtacatctgcgtcggcgaagg 148 ||||||| || || ||||||||||| || ||||| Sbjct: 117820 cctaccattattcatacatctgcgttggtgaagg 117787 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 417 gtgatgctatttgttatcatagctggcagttacatcggcttccaaacaggatgggtcggc 476 |||||| |||||||||| ||||||| ||||| ||||||||||| | ||||||||| ||| Sbjct: 117153 gtgatgatatttgttattgtagctggtagttatatcggcttccagataggatgggttggc 117094 Query: 477 ta 478 || Sbjct: 117093 ta 117092
>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete sequence Length = 130193 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Plus Query: 513 aatggaatgcttgctggctcagcaaccgttttctttgcctacataggctttgattcagtt 572 ||||||||||||||||| |||||||| ||||||||||| || || ||||||||| ||||| Sbjct: 81766 aatggaatgcttgctggatcagcaactgttttctttgcatatattggctttgatacagtt 81825 Query: 573 gctagcactgctgaagaggtgaaga 597 ||||| |||||||| ||||| |||| Sbjct: 81826 gctagtactgctgaggaggttaaga 81850 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Plus Query: 55 ccgcgctttcggctttctgttacgcggagcttgctagccgctgcccttccgcgggaagcg 114 ||||||| || || |||||||| || ||||||||||| || ||||| || || ||||||| Sbjct: 80867 ccgcgctctcagccttctgttatgccgagcttgctagtcggtgcccatctgctggaagcg 80926 Query: 115 cctaccactactcgtacatctgcgtcggcgaagg 148 ||||||| || || ||||||||||| || ||||| Sbjct: 80927 cctaccattattcatacatctgcgttggtgaagg 80960 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 417 gtgatgctatttgttatcatagctggcagttacatcggcttccaaacaggatgggtcggc 476 |||||| |||||||||| ||||||| ||||| ||||||||||| | ||||||||| ||| Sbjct: 81594 gtgatgatatttgttattgtagctggtagttatatcggcttccagataggatgggttggc 81653 Query: 477 ta 478 || Sbjct: 81654 ta 81655
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 513 aatggaatgcttgctggctcagcaaccgttttctttgcctacataggctttgattcagtt 572 ||||||||||||||||| |||||||| ||||||||||| || || ||||||||| ||||| Sbjct: 25220942 aatggaatgcttgctggatcagcaactgttttctttgcatatattggctttgatacagtt 25220883 Query: 573 gctagcactgctgaagaggtgaaga 597 ||||| |||||||| ||||| |||| Sbjct: 25220882 gctagtactgctgaggaggttaaga 25220858 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 55 ccgcgctttcggctttctgttacgcggagcttgctagccgctgcccttccgcgggaagcg 114 ||||||| || || |||||||| || ||||||||||| || ||||| || || ||||||| Sbjct: 25221841 ccgcgctctcagccttctgttatgccgagcttgctagtcggtgcccatctgctggaagcg 25221782 Query: 115 cctaccactactcgtacatctgcgtcggcgaagg 148 ||||||| || || ||||||||||| || ||||| Sbjct: 25221781 cctaccattattcatacatctgcgttggtgaagg 25221748 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 417 gtgatgctatttgttatcatagctggcagttacatcggcttccaaacaggatgggtcggc 476 |||||| |||||||||| ||||||| ||||| ||||||||||| | ||||||||| ||| Sbjct: 25221114 gtgatgatatttgttattgtagctggtagttatatcggcttccagataggatgggttggc 25221055 Query: 477 ta 478 || Sbjct: 25221054 ta 25221053
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 97.6 bits (49), Expect = 4e-17 Identities = 76/85 (89%) Strand = Plus / Minus Query: 513 aatggaatgcttgctggctcagcaaccgttttctttgcctacataggctttgattcagtt 572 ||||||||||||||||| |||||||| ||||||||||| || || ||||||||| ||||| Sbjct: 25312314 aatggaatgcttgctggatcagcaactgttttctttgcatatattggctttgatacagtt 25312255 Query: 573 gctagcactgctgaagaggtgaaga 597 ||||| |||||||| ||||| |||| Sbjct: 25312254 gctagtactgctgaggaggttaaga 25312230 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 55 ccgcgctttcggctttctgttacgcggagcttgctagccgctgcccttccgcgggaagcg 114 ||||||| || || |||||||| || ||||||||||| || ||||| || || ||||||| Sbjct: 25313213 ccgcgctctcagccttctgttatgccgagcttgctagtcggtgcccatctgctggaagcg 25313154 Query: 115 cctaccactactcgtacatctgcgtcggcgaagg 148 ||||||| || || ||||||||||| || ||||| Sbjct: 25313153 cctaccattattcatacatctgcgttggtgaagg 25313120 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 417 gtgatgctatttgttatcatagctggcagttacatcggcttccaaacaggatgggtcggc 476 |||||| |||||||||| ||||||| ||||| ||||||||||| | ||||||||| ||| Sbjct: 25312486 gtgatgatatttgttattgtagctggtagttatatcggcttccagataggatgggttggc 25312427 Query: 477 ta 478 || Sbjct: 25312426 ta 25312425
>ref|NM_196668.1| Oryza sativa (japonica cultivar-group) putative cationic amino acid transporter -like protein (OSJNBb0040I11.4), mRNA Length = 2022 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 526 ctggctcagcaaccgttttctttgcctacataggctttgattcagttgctagcactgctg 585 |||| ||||||||| | ||||||||||| || ||||||||| ||||||||||||| |||| Sbjct: 935 ctggatcagcaaccctcttctttgcctatattggctttgatgcagttgctagcacagctg 994 Query: 586 aagaggtgaagaa 598 ||||||||||||| Sbjct: 995 aagaggtgaagaa 1007
>dbj|AK100205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041E12, full insert sequence Length = 2216 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Plus Query: 526 ctggctcagcaaccgttttctttgcctacataggctttgattcagttgctagcactgctg 585 |||| ||||||||| | ||||||||||| || ||||||||| ||||||||||||| |||| Sbjct: 832 ctggatcagcaaccctcttctttgcctatattggctttgatgcagttgctagcacagctg 891 Query: 586 aagaggtgaagaa 598 ||||||||||||| Sbjct: 892 aagaggtgaagaa 904
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 526 ctggctcagcaaccgttttctttgcctacataggctttgattcagttgctagcactgctg 585 |||| ||||||||| | ||||||||||| || ||||||||| ||||||||||||| |||| Sbjct: 15119666 ctggatcagcaaccctcttctttgcctatattggctttgatgcagttgctagcacagctg 15119607 Query: 586 aagaggt 592 ||||||| Sbjct: 15119606 aagaggt 15119600
>gb|AC087547.2|AC087547 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0040I11, complete sequence Length = 129420 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 526 ctggctcagcaaccgttttctttgcctacataggctttgattcagttgctagcactgctg 585 |||| ||||||||| | ||||||||||| || ||||||||| ||||||||||||| |||| Sbjct: 28279 ctggatcagcaaccctcttctttgcctatattggctttgatgcagttgctagcacagctg 28220 Query: 586 aagaggt 592 ||||||| Sbjct: 28219 aagaggt 28213
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Minus Query: 526 ctggctcagcaaccgttttctttgcctacataggctttgattcagttgctagcactgctg 585 |||| ||||||||| | ||||||||||| || ||||||||| ||||||||||||| |||| Sbjct: 15127907 ctggatcagcaaccctcttctttgcctatattggctttgatgcagttgctagcacagctg 15127848 Query: 586 aagaggt 592 ||||||| Sbjct: 15127847 aagaggt 15127841
>ref|NM_179491.1| Arabidopsis thaliana CAT2 (CATIONIC AMINO ACID TRANSPORTER 2); amino acid-polyamine transporter AT1G58030 (CAT2) mRNA, complete cds Length = 2366 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 144 gaaggagttgcatggttgatcggctgggctttgatactggagtatacgattggcggatca 203 ||||| ||||| ||| | ||||| ||||| ||||| ||||||||||| ||||| || ||| Sbjct: 634 gaaggtgttgcgtggataatcggttgggcgttgattctggagtataccattggtggctca 693 Query: 204 gccgttgcccgcggcatatcacccaatct 232 || |||||||| |||||||| || ||||| Sbjct: 694 gctgttgcccgtggcatatcccctaatct 722
>gb|BT000457.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 2349 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 144 gaaggagttgcatggttgatcggctgggctttgatactggagtatacgattggcggatca 203 ||||| ||||| ||| | ||||| ||||| ||||| ||||||||||| ||||| || ||| Sbjct: 632 gaaggtgttgcgtggataatcggttgggcgttgattctggagtataccattggtggctca 691 Query: 204 gccgttgcccgcggcatatcacccaatct 232 || |||||||| |||||||| || ||||| Sbjct: 692 gctgttgcccgtggcatatcccctaatct 720
>gb|AF367304.1| Arabidopsis thaliana AT5g36940/MLF18_60 mRNA, complete cds Length = 2327 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 144 gaaggagttgcatggttgatcggctgggctttgatactggagtatacgattggcggatca 203 ||||| ||||| ||| | ||||| ||||| ||||| ||||||||||| ||||| || ||| Sbjct: 624 gaaggtgttgcgtggataatcggttgggcgttgattctggagtataccattggtggctca 683 Query: 204 gccgttgcccgcggcatatcacccaatct 232 || |||||||| |||||||| || ||||| Sbjct: 684 gctgttgcccgtggcatatcccctaatct 712
>gb|AC137986.27| Medicago truncatula clone mth2-7g6, complete sequence Length = 128361 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 150 gttgcatggttgatcggctgggctttgatactggagtatacgattgg 196 ||||| ||||||||||||||||| ||| ||||||| ||||||||||| Sbjct: 10501 gttgcttggttgatcggctgggccttgttactggaatatacgattgg 10547 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 514 atggaatgcttgctggctcagcaaccgttttctttgcctacataggctttgattcagttg 573 |||| ||||||||||| || || || || || ||||| || |||| |||||| |||||| Sbjct: 11452 atgggatgcttgctggttctgcgacagtcttttttgcatatgtaggttttgatgcagttg 11511 Query: 574 ctagcactgctgaagaggt 592 | ||||||||||||||||| Sbjct: 11512 ccagcactgctgaagaggt 11530
>gb|AC079604.5|AC079604 Arabidopsis thaliana chromosome 1 BAC T15M6 genomic sequence, complete sequence Length = 103637 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 162 atcggctgggctttgatactggagtatacgattggcggatcagccgttgcccgcggcata 221 ||||| ||||| ||||| ||||||||||| ||||| || ||||| |||||||| |||||| Sbjct: 29255 atcggttgggcgttgattctggagtataccattggtggctcagctgttgcccgtggcata 29196 Query: 222 tcacccaatct 232 || || ||||| Sbjct: 29195 tcccctaatct 29185
>ref|NM_123052.3| Arabidopsis thaliana CAT3 (CATIONIC AMINO ACID TRANSPORTER 3); cationic amino acid transporter AT5G36940 (CAT3) mRNA, complete cds Length = 2213 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 514 atggaatgcttgctggctcagcaaccgttttctttgcctacataggctttgattcagttg 573 ||||||||||| |||| || || || || |||||||||||||| || |||||| |||||| Sbjct: 828 atggaatgcttactggatctgctactgtcttctttgcctacatcgggtttgatacagttg 887 Query: 574 c 574 | Sbjct: 888 c 888 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 144 gaaggagttgcatggttgatcggctgggctttgatactggagtatacgattggcggatca 203 ||||| ||||| |||||||| |||||||| |||| |||| || || ||||| || ||| Sbjct: 458 gaaggtgttgcgtggttgattggctgggcgctgattttggaatacacaattggtggttca 517 Query: 204 gccgttgcccgcggcatatcacccaatct 232 | ||||||||||||||||| || ||||| Sbjct: 518 acagttgcccgcggcatatctccaaatct 546
>gb|BT013668.1| Lycopersicon esculentum clone 132487R, mRNA sequence Length = 2235 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 525 gctggctcagcaaccgttttctttgcctacataggctttgattcagttgctagcactgct 584 |||||||| || || || |||||| | ||||| || |||||| |||||||||||| ||| Sbjct: 808 gctggctctgccacagtcttcttttcatacattggttttgatatagttgctagcacagct 867 Query: 585 gaagaggtgaagaaccc 601 || ||||| |||||||| Sbjct: 868 gaggaggtaaagaaccc 884
>emb|BX830631.1|CNS09YPZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2107 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 514 atggaatgcttgctggctcagcaaccgttttctttgcctacataggctttgattcagttg 573 ||||||||||| |||| || || || || |||||||||||||| || |||||| |||||| Sbjct: 838 atggaatgcttactggatctgctactgtcttctttgcctacatcgggtttgatacagttg 897 Query: 574 c 574 | Sbjct: 898 c 898 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 144 gaaggagttgcatggttgatcggctgggctttgatactggagtatacgattggcggatca 203 ||||| ||||| |||||||| |||||||| |||| |||| || || ||||| || ||| Sbjct: 468 gaaggtgttgcgtggttgattggctgggcgctgattttggaatacacaattggtggttca 527 Query: 204 gccgttgcccgcggcatatcacccaatct 232 | ||||||||||||||||| || ||||| Sbjct: 528 acagttgcccgcggcatatctccaaatct 556
>dbj|AB016877.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MLF18 Length = 74842 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 514 atggaatgcttgctggctcagcaaccgttttctttgcctacataggctttgattcagttg 573 ||||||||||| |||| || || || || |||||||||||||| || |||||| |||||| Sbjct: 51696 atggaatgcttactggatctgctactgtcttctttgcctacatcgggtttgatacagttg 51755 Query: 574 c 574 | Sbjct: 51756 c 51756 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Plus Query: 150 gttgcatggttgatcggctgggctttgatactggagtatacgattggcggatcagccgtt 209 ||||| |||||||| |||||||| |||| |||| || || ||||| || ||| | ||| Sbjct: 50763 gttgcgtggttgattggctgggcgctgattttggaatacacaattggtggttcaacagtt 50822 Query: 210 gcccgcggcatatcacccaatct 232 |||||||||||||| || ||||| Sbjct: 50823 gcccgcggcatatctccaaatct 50845
>dbj|AK117747.1| Arabidopsis thaliana At5g36940 mRNA for putative cationic amino acid transporter, complete cds, clone: RAFL17-43-G07 Length = 2097 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 514 atggaatgcttgctggctcagcaaccgttttctttgcctacataggctttgattcagttg 573 ||||||||||| |||| || || || || |||||||||||||| || |||||| |||||| Sbjct: 712 atggaatgcttactggatctgctactgtcttctttgcctacatcgggtttgatacagttg 771 Query: 574 c 574 | Sbjct: 772 c 772 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 144 gaaggagttgcatggttgatcggctgggctttgatactggagtatacgattggcggatca 203 ||||| ||||| |||||||| |||||||| |||| |||| || || ||||| || ||| Sbjct: 342 gaaggtgttgcgtggttgattggctgggcgctgattttggaatacacaattggtggttca 401 Query: 204 gccgttgcccgcggcatatcacccaatct 232 | ||||||||||||||||| || ||||| Sbjct: 402 acagttgcccgcggcatatctccaaatct 430
>gb|AC159398.2| Physcomitrella patens clone JGIASYB-5K21, complete sequence Length = 41585 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Minus Query: 541 ttttctttgcctacataggctttgattcagttgctagcactgctgaagaggt 592 |||||||||||||||| || || ||| | ||||| |||||||| |||||||| Sbjct: 22862 ttttctttgcctacattggattcgatactgttgcaagcactgcagaagaggt 22811 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 72 tgttacgcggagcttgctagccgctgcccttc 103 |||||||||||||| ||||||| |||||||| Sbjct: 23932 tgttacgcggagctatctagccgatgcccttc 23901
>dbj|AB098524.1| Petunia x hybrida mRNA for PHCLF2, complete cds Length = 3179 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 504 tatggggtgaatggaatgcttg 525 |||||||||||||||||||||| Sbjct: 1922 tatggggtgaatggaatgcttg 1943
>gb|AC114537.6| Mus musculus chromosome 15, clone RP23-51A16, complete sequence Length = 189760 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 294 tggttagatgttgttgttgatcctt 318 |||||| |||||||||||||||||| Sbjct: 46869 tggttatatgttgttgttgatcctt 46845
>gb|AC162887.5| Mus musculus chromosome 19, clone RP23-414O6, complete sequence Length = 190704 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 572 tgctagcactgctgaagaggt 592 ||||||||||||||||||||| Sbjct: 145537 tgctagcactgctgaagaggt 145517
>gb|AC004890.2| Homo sapiens PAC clone RP4-800G7 from 7, complete sequence Length = 164028 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 325 ctgccttggttttccttgtcactgc 349 ||||||||||| ||||||||||||| Sbjct: 146270 ctgccttggttgtccttgtcactgc 146294
>gb|AC148926.4| Pan troglodytes BAC clone RP43-136P16 from chromosome 7, complete sequence Length = 178320 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 ctgccttggttttccttgtcactgc 349 ||||||||||| ||||||||||||| Sbjct: 101864 ctgccttggttgtccttgtcactgc 101840
>gb|AC145857.3| Pan troglodytes BAC clone RP43-6D4 from chromosome 7, complete sequence Length = 208516 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 325 ctgccttggttttccttgtcactgc 349 ||||||||||| ||||||||||||| Sbjct: 179840 ctgccttggttgtccttgtcactgc 179816
>dbj|AB089852.1| Alicyclobacillus acidoterrestris gyrB gene for gyrase B subunit, partial cds Length = 1170 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 473 cggctacaaggtgtctggcgg 493 ||||||||||||||||||||| Sbjct: 6 cggctacaaggtgtctggcgg 26
>gb|AC138260.7| Mus musculus chromosome 6, clone RP23-247I19, complete sequence Length = 197686 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gtgatgctatttgttatcat 436 |||||||||||||||||||| Sbjct: 112267 gtgatgctatttgttatcat 112286
>gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome 6, complete sequence Length = 238262 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 gtgatgctatttgttatcat 436 |||||||||||||||||||| Sbjct: 68944 gtgatgctatttgttatcat 68963
>gb|AY338499.1| Apis mellifera Kruppel-like protein 1 mRNA, complete cds Length = 1503 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tggttttccttgtcactgcc 350 |||||||||||||||||||| Sbjct: 947 tggttttccttgtcactgcc 928
>emb|AL731595.1|OSJN00238 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M21, complete sequence Length = 151218 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 gctgctgccttggttttccttgtc 344 |||||||| ||||||||||||||| Sbjct: 128631 gctgctgcattggttttccttgtc 128608
>emb|CR392331.15| Zebrafish DNA sequence from clone CH211-9F23 in linkage group 4, complete sequence Length = 170278 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 581 tgctgaagaggtgaagaacc 600 |||||||||||||||||||| Sbjct: 115031 tgctgaagaggtgaagaacc 115012
>gb|AC091970.3| Homo sapiens chromosome 5 clone RP11-509B9, complete sequence Length = 170119 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gccttggttttccttgtcac 346 |||||||||||||||||||| Sbjct: 13752 gccttggttttccttgtcac 13733
>emb|BX005475.19| Zebrafish DNA sequence from clone CH211-165I18 in linkage group 4, complete sequence Length = 157194 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 581 tgctgaagaggtgaagaacc 600 |||||||||||||||||||| Sbjct: 91169 tgctgaagaggtgaagaacc 91150
>gb|AC026432.4| Homo sapiens chromosome 5 clone CTD-2228C1, complete sequence Length = 113194 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 gccttggttttccttgtcac 346 |||||||||||||||||||| Sbjct: 19571 gccttggttttccttgtcac 19590
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 gctgctgccttggttttccttgtc 344 |||||||| ||||||||||||||| Sbjct: 13134818 gctgctgcattggttttccttgtc 13134795
>emb|AL731622.1|OSJN00265 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093P23, complete sequence Length = 165683 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 gctgctgccttggttttccttgtc 344 |||||||| ||||||||||||||| Sbjct: 67028 gctgctgcattggttttccttgtc 67005
>ref|NM_001011566.1| Apis mellifera kruppel-like protein 1 (Kr-h1), mRNA Length = 1503 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tggttttccttgtcactgcc 350 |||||||||||||||||||| Sbjct: 947 tggttttccttgtcactgcc 928
>gb|AC027332.4|AC027332 Homo sapiens chromosome 5 clone CTD-2193I13, complete sequence Length = 155150 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gccttggttttccttgtcac 346 |||||||||||||||||||| Sbjct: 146901 gccttggttttccttgtcac 146882
>gb|AC114798.5| Homo sapiens BAC clone RP11-713K18 from 4, complete sequence Length = 34025 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 gttttctttgcctacatagg 559 |||||||||||||||||||| Sbjct: 7182 gttttctttgcctacatagg 7201 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,647,853 Number of Sequences: 3902068 Number of extensions: 4647853 Number of successful extensions: 69566 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 69344 Number of HSP's gapped (non-prelim): 217 length of query: 613 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 590 effective length of database: 17,143,297,704 effective search space: 10114545645360 effective search space used: 10114545645360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
