ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal29e11 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_186000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 915 Score = 737 bits (372), Expect = 0.0 Identities = 582/652 (89%) Strand = Plus / Plus Query: 1 gggggcccgggagtactacgactaccggcgggccatctacggcgaaatcacgcacaaggc 60 |||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 153 gggggcgcgggagtactacgactaccggagggccatctacggcgacatcacccacaaggc 212 Query: 61 catcctcgtcgacgccgccggcaccctcctcgcccccaccgagcccatggcccaggtgta 120 ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||| || Sbjct: 213 catcctcgtcgacgccgccgggacgctcctcgcccccaccgagcccatggcgcaggtata 272 Query: 121 cagaacaataggcgaaaagtatggggtgaagtactcggaggatgagatcttgatgaggta 180 ||||||||| |||||||||||||| || || ||||| |||||||||||||||||||| || Sbjct: 273 cagaacaattggcgaaaagtatggagtcaactactcagaggatgagatcttgatgagata 332 Query: 181 ccggcaggcatattcgcagccatggggcaaatcgcggcttaggtatgtcgatgacgggag 240 | || ||| ||| ||||||||||||| | ||||||||| |||||||| ||||| || || Sbjct: 333 caggagggcttatgcgcagccatggggtagatcgcggctgaggtatgtggatgatggtag 392 Query: 241 gcccttttggcaacatatagttagttcttctacaggctgctcagatttacagtacttcga 300 |||||| ||||| ||||||||||| ||||| || || |||||||||||||||||||| || Sbjct: 393 gcccttctggcagcatatagttagctcttcaactggatgctcagatttacagtactttga 452 Query: 301 ggaactttatcattactatacaactgagaaggcctggcagctcattgatcccgatgctaa 360 |||||||||||| ||||||||||||| ||||| ||||||||| || || || ||||| Sbjct: 453 ggaactttatcagtactatacaactgcaaaggcttggcagctctgcgaccctgacgctaa 512 Query: 361 atacgtttttgaagcattaagaagggctggtgtgagaacagctgttgtatccaactttga 420 ||| |||||||||||||| |||| ||||||||| | |||||||||||||||||||||||| Sbjct: 513 atatgtttttgaagcattgagaaaggctggtgtaaaaacagctgttgtatccaactttga 572 Query: 421 cacccgcctccggccacttttacaggcactgaattgtgatcactggtttgatgcggttgc 480 ||| || || ||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 573 cacacgtcttcggccacttttacaggccctgaattgtgatcactggtttgatgcagttgc 632 Query: 481 tgtatctgctgaggttgcagcagaaaagccaaacccaacaatattcctgaaggcctgcga 540 |||||||||||||||||| || |||||||||||||||||||||||| ||||||| ||||| Sbjct: 633 tgtatctgctgaggttgctgcggaaaagccaaacccaacaatattcttgaaggcttgcga 692 Query: 541 gttgttggatgtgaagcctgaagaggctgtgcatattggggacgaccgtcggaacgatct 600 ||| || | ||||||||||||||| |||||||||||||| || ||||| |||| ||||| Sbjct: 693 gtttttaggtgtgaagcctgaagaagctgtgcatattggtgatgaccgcaggaatgatct 752 Query: 601 gtggggagctagggacgcaggctgcgatgcctggctttggggcagtgatgtt 652 |||||||| ||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 753 ctggggagccagggatgcaggctgtgatgcctggctctggggcagtgatgtt 804
>gb|DQ103591.1| Oryza sativa (japonica cultivar-group) DT-related protein (Dr1) mRNA, complete cds Length = 876 Score = 729 bits (368), Expect = 0.0 Identities = 581/652 (89%) Strand = Plus / Plus Query: 1 gggggcccgggagtactacgactaccggcgggccatctacggcgaaatcacgcacaaggc 60 |||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 48 gggggcgcgggagtactacgactaccggagggccatctacggcgacatcacccacaaggc 107 Query: 61 catcctcgtcgacgccgccggcaccctcctcgcccccaccgagcccatggcccaggtgta 120 ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||| || Sbjct: 108 catcctcgtcgacgccgccgggacgctcctcgcccccaccgagcccatggcgcaggtata 167 Query: 121 cagaacaataggcgaaaagtatggggtgaagtactcggaggatgagatcttgatgaggta 180 ||||||||| |||||||||||||| || || ||||| |||||||||||||||||||| || Sbjct: 168 cagaacaattggcgaaaagtatggagtcaactactcagaggatgagatcttgatgagata 227 Query: 181 ccggcaggcatattcgcagccatggggcaaatcgcggcttaggtatgtcgatgacgggag 240 | || ||| ||| ||||||||||||| | |||||| || |||||||| ||||| || || Sbjct: 228 caggagggcttatgcgcagccatggggtagatcgcgtctgaggtatgtggatgatggtag 287 Query: 241 gcccttttggcaacatatagttagttcttctacaggctgctcagatttacagtacttcga 300 |||||| ||||| ||||||||||| ||||| || || |||||||||||||||||||| || Sbjct: 288 gcccttctggcagcatatagttagctcttcaactggatgctcagatttacagtactttga 347 Query: 301 ggaactttatcattactatacaactgagaaggcctggcagctcattgatcccgatgctaa 360 |||||||||||| ||||||||||||| ||||| ||||||||| || || || ||||| Sbjct: 348 ggaactttatcagtactatacaactgcaaaggcttggcagctctgcgaccctgacgctaa 407 Query: 361 atacgtttttgaagcattaagaagggctggtgtgagaacagctgttgtatccaactttga 420 ||| |||||||||||||| |||| ||||||||| | |||||||||||||||||||||||| Sbjct: 408 atatgtttttgaagcattgagaaaggctggtgtaaaaacagctgttgtatccaactttga 467 Query: 421 cacccgcctccggccacttttacaggcactgaattgtgatcactggtttgatgcggttgc 480 ||| || || ||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 468 cactcgtcttcggccacttttacaggccctgaattgtgatcactggtttgatgcagttgc 527 Query: 481 tgtatctgctgaggttgcagcagaaaagccaaacccaacaatattcctgaaggcctgcga 540 |||||||||||||||||| || |||||||||||||||||||||||| ||||||| ||||| Sbjct: 528 tgtatctgctgaggttgctgcggaaaagccaaacccaacaatattcttgaaggcttgcga 587 Query: 541 gttgttggatgtgaagcctgaagaggctgtgcatattggggacgaccgtcggaacgatct 600 ||| || | ||||||||||||||| |||||||||||||| || ||||| |||| ||||| Sbjct: 588 gtttttaggtgtgaagcctgaagaagctgtgcatattggtgatgaccgcaggaatgatct 647 Query: 601 gtggggagctagggacgcaggctgcgatgcctggctttggggcagtgatgtt 652 |||||||| ||||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 648 ctggggagccagggatgcaggctgtgatgcctggctctggggcagtgatgtt 699
>gb|AY107813.1| Zea mays PCO123922 mRNA sequence Length = 730 Score = 276 bits (139), Expect = 9e-71 Identities = 238/271 (87%) Strand = Plus / Plus Query: 68 gtcgacgccgccggcaccctcctcgcccccaccgagcccatggcccaggtgtacagaaca 127 ||||||||||||||||| || ||||||||||||||||||||||| ||||||||||| || Sbjct: 8 gtcgacgccgccggcacgctgctcgcccccaccgagcccatggcgcaggtgtacaggacg 67 Query: 128 ataggcgaaaagtatggggtgaagtactcggaggatgagatcttgatgaggtaccggcag 187 |||||| | ||||| || ||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 68 ataggccagaagtacggagtgaattactcagaggatgagattctgatgcggtaccggcta 127 Query: 188 gcatattcgcagccatggggcaaatcgcggcttaggtatgtcgatgacgggaggcccttt 247 || ||| ||||||||||||| |||||| || ||||||||||||||||| ||||||||| Sbjct: 128 gcttatgcgcagccatggggtcgatcgcgtctgaggtatgtcgatgacggaaggcccttt 187 Query: 248 tggcaacatatagttagttcttctacaggctgctcagatttacagtacttcgaggaactt 307 |||||||||||||| || || ||||| |||||||||||| ||||||||||||||||||| Sbjct: 188 tggcaacatatagtgagctcatctaccggctgctcagatctacagtacttcgaggaactg 247 Query: 308 tatcattactatacaactgagaaggcctggc 338 || || ||||| ||||||||||||||||||| Sbjct: 248 taccagtactacacaactgagaaggcctggc 278 Score = 196 bits (99), Expect = 6e-47 Identities = 204/239 (85%) Strand = Plus / Plus Query: 410 tccaactttgacacccgcctccggccacttttacaggcactgaattgtgatcactggttt 469 |||||||| ||||| || || ||||| ||||||||||| ||||| || || |||||| Sbjct: 350 tccaacttcgacactcgtcttcggccgcttttacaggcgctgaaatgcgacggctggttc 409 Query: 470 gatgcggttgctgtatctgctgaggttgcagcagaaaagccaaacccaacaatattcctg 529 || || |||||||| |||||||||||||||||||||||||| ||||| ||||||||| || Sbjct: 410 gacgcagttgctgtgtctgctgaggttgcagcagaaaagccgaaccccacaatattcttg 469 Query: 530 aaggcctgcgagttgttggatgtgaagcctgaagaggctgtgcatattggggacgaccgt 589 |||||||||||| || | | ||||| |||||||| || ||||| ||||| || |||||| Sbjct: 470 aaggcctgcgagctgctaggagtgaaacctgaagaagcggtgcacattggtgatgaccgt 529 Query: 590 cggaacgatctgtggggagctagggacgcaggctgcgatgcctggctttggggcagtga 648 ||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 530 aggaacgacttatggggagcgagggatgcaggctgcgatgcctggctttggggcagtga 588
>dbj|AK108402.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-G05, full insert sequence Length = 1071 Score = 214 bits (108), Expect = 3e-52 Identities = 259/308 (84%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 346 tgatcccgatgctaaatacgtttttgaagcattaagaagggctggtgtgagaacagctgt 405 |||||| |||||| || |||| ||| |||| ||||||| ||| ||||| | ||| ||||| Sbjct: 579 tgatcctgatgctgaaaacgtatttaaagctttaagaaaggcaggtgtcaaaactgctgt 638 Query: 406 tgtatccaactttgacacccgcctccggccacttttacaggcactgaattgtgatcactg 465 ||| ||||| ||||| ||||| || ||||| || ||||| | ||||| ||||||||||| Sbjct: 639 tgtctccaattttgatacccgtctacggcctctgttacatgttctgaagtgtgatcactg 698 Query: 466 gtttgatgcggttgctgtatctgctgaggttgcagcagaaaagccaaacccaacaatatt 525 ||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| Sbjct: 699 gtttgatgcggttgcggtctctgctgaggttgctgcagaaaagccaaacccaacaatatt 758 Query: 526 cctgaaggcctgcgagttgttggatgtgaagcctgaagaggctgtgcatattggggacga 585 |||||||| || |||| || | ||| || ||||||||||| |||||| | || || || Sbjct: 759 tctgaaggcatgtgagtctttaggtgtcaaacctgaagaggccgtgcatgtcggcgatga 818 Query: 586 ccgtcggaacgatctgtggggagctagggacgcaggctgcgatgcctggctttggggcag 645 ||| ||| ||| | ||||||||||| || |||||||||||||||||||| ||||| || Sbjct: 819 tcgt-agaatgatatatggggagctagagatgcaggctgcgatgcctggctatggggaag 877 Query: 646 tgatgttc 653 |||||||| Sbjct: 878 tgatgttc 885 Score = 60.0 bits (30), Expect = 1e-05 Identities = 129/162 (79%) Strand = Plus / Plus Query: 8 cgggagtactacgactaccggcgggccatctacggcgaaatcacgcacaaggccatcctc 67 |||||||||||||||||||| | || |||||||||| |||| ||| ||| ||||| Sbjct: 332 cgggagtactacgactaccgcaagtccgtctacggcgacgtcacccaccgcgccctcctc 391 Query: 68 gtcgacgccgccggcaccctcctcgcccccaccgagcccatggcccaggtgtacagaaca 127 |||||||||| |||||||||| ||| |||| | |||||| || ||||||| | | Sbjct: 392 gtcgacgccgtcggcaccctcgtcgtccccgcgcagcccaccgctaaggtgtataagagc 451 Query: 128 ataggcgaaaagtatggggtgaagtactcggaggatgagatc 169 || || || |||||||| ||||||||||| || ||||||||| Sbjct: 452 attggtgagaagtatggagtgaagtactccgaagatgagatc 493
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 198 bits (100), Expect = 2e-47 Identities = 130/140 (92%) Strand = Plus / Minus Query: 356 gctaaatacgtttttgaagcattaagaagggctggtgtgagaacagctgttgtatccaac 415 |||||||| |||||||||||||| |||| ||||||||| | ||||||||||||||||||| Sbjct: 27730883 gctaaatatgtttttgaagcattgagaaaggctggtgtaaaaacagctgttgtatccaac 27730824 Query: 416 tttgacacccgcctccggccacttttacaggcactgaattgtgatcactggtttgatgcg 475 |||||||| || || ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 27730823 tttgacacacgtcttcggccacttttacaggccctgaattgtgatcactggtttgatgca 27730764 Query: 476 gttgctgtatctgctgaggt 495 |||||||||||||||||||| Sbjct: 27730763 gttgctgtatctgctgaggt 27730744 Score = 176 bits (89), Expect = 6e-41 Identities = 110/117 (94%) Strand = Plus / Minus Query: 1 gggggcccgggagtactacgactaccggcgggccatctacggcgaaatcacgcacaaggc 60 |||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 27732989 gggggcgcgggagtactacgactaccggagggccatctacggcgacatcacccacaaggc 27732930 Query: 61 catcctcgtcgacgccgccggcaccctcctcgcccccaccgagcccatggcccaggt 117 ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 27732929 catcctcgtcgacgccgccgggacgctcctcgcccccaccgagcccatggcgcaggt 27732873 Score = 176 bits (89), Expect = 6e-41 Identities = 143/161 (88%) Strand = Plus / Minus Query: 492 aggttgcagcagaaaagccaaacccaacaatattcctgaaggcctgcgagttgttggatg 551 ||||||| || |||||||||||||||||||||||| ||||||| |||||||| || | || Sbjct: 27730646 aggttgctgcggaaaagccaaacccaacaatattcttgaaggcttgcgagtttttaggtg 27730587 Query: 552 tgaagcctgaagaggctgtgcatattggggacgaccgtcggaacgatctgtggggagcta 611 ||||||||||||| |||||||||||||| || ||||| |||| ||||| |||||||| | Sbjct: 27730586 tgaagcctgaagaagctgtgcatattggtgatgaccgcaggaatgatctctggggagcca 27730527 Query: 612 gggacgcaggctgcgatgcctggctttggggcagtgatgtt 652 |||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 27730526 gggatgcaggctgtgatgcctggctctggggcagtgatgtt 27730486 Score = 123 bits (62), Expect = 8e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 221 aggtatgtcgatgacgggaggcccttttggcaacatatagttagttcttctacaggctgc 280 |||||||| ||||| || |||||||| ||||| ||||||||||| ||||| || || ||| Sbjct: 27731103 aggtatgtggatgatggtaggcccttctggcagcatatagttagctcttcaactggatgc 27731044 Query: 281 tcagatttacagtacttcgaggaactttatcattactatacaactg 326 ||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 27731043 tcagatttacagtactttgaggaactttatcagtactatacaactg 27730998 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 113 caggtgtacagaacaataggcgaaaagtatggggtgaagtactcggaggatgagatcttg 172 ||||| ||||||||||| |||||||||||||| || || ||||| ||||||||||||||| Sbjct: 27732377 caggtatacagaacaattggcgaaaagtatggagtcaactactcagaggatgagatcttg 27732318 Query: 173 atgaggtaccggcaggcatattcgcagccatggggcaaatcgcggcttaggta 225 ||||| ||| || ||| ||| ||||||||||||| | ||||||||| ||||| Sbjct: 27732317 atgagatacaggagggcttatgcgcagccatggggtagatcgcggctgaggta 27732265 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 10471841 tacagtacttcgaggaactt 10471822
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496C02 Length = 148419 Score = 198 bits (100), Expect = 2e-47 Identities = 130/140 (92%) Strand = Plus / Minus Query: 356 gctaaatacgtttttgaagcattaagaagggctggtgtgagaacagctgttgtatccaac 415 |||||||| |||||||||||||| |||| ||||||||| | ||||||||||||||||||| Sbjct: 23262 gctaaatatgtttttgaagcattgagaaaggctggtgtaaaaacagctgttgtatccaac 23203 Query: 416 tttgacacccgcctccggccacttttacaggcactgaattgtgatcactggtttgatgcg 475 |||||||| || || ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 23202 tttgacacacgtcttcggccacttttacaggccctgaattgtgatcactggtttgatgca 23143 Query: 476 gttgctgtatctgctgaggt 495 |||||||||||||||||||| Sbjct: 23142 gttgctgtatctgctgaggt 23123 Score = 176 bits (89), Expect = 6e-41 Identities = 110/117 (94%) Strand = Plus / Minus Query: 1 gggggcccgggagtactacgactaccggcgggccatctacggcgaaatcacgcacaaggc 60 |||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 25368 gggggcgcgggagtactacgactaccggagggccatctacggcgacatcacccacaaggc 25309 Query: 61 catcctcgtcgacgccgccggcaccctcctcgcccccaccgagcccatggcccaggt 117 ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 25308 catcctcgtcgacgccgccgggacgctcctcgcccccaccgagcccatggcgcaggt 25252 Score = 176 bits (89), Expect = 6e-41 Identities = 143/161 (88%) Strand = Plus / Minus Query: 492 aggttgcagcagaaaagccaaacccaacaatattcctgaaggcctgcgagttgttggatg 551 ||||||| || |||||||||||||||||||||||| ||||||| |||||||| || | || Sbjct: 23025 aggttgctgcggaaaagccaaacccaacaatattcttgaaggcttgcgagtttttaggtg 22966 Query: 552 tgaagcctgaagaggctgtgcatattggggacgaccgtcggaacgatctgtggggagcta 611 ||||||||||||| |||||||||||||| || ||||| |||| ||||| |||||||| | Sbjct: 22965 tgaagcctgaagaagctgtgcatattggtgatgaccgcaggaatgatctctggggagcca 22906 Query: 612 gggacgcaggctgcgatgcctggctttggggcagtgatgtt 652 |||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 22905 gggatgcaggctgtgatgcctggctctggggcagtgatgtt 22865 Score = 123 bits (62), Expect = 8e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 221 aggtatgtcgatgacgggaggcccttttggcaacatatagttagttcttctacaggctgc 280 |||||||| ||||| || |||||||| ||||| ||||||||||| ||||| || || ||| Sbjct: 23482 aggtatgtggatgatggtaggcccttctggcagcatatagttagctcttcaactggatgc 23423 Query: 281 tcagatttacagtacttcgaggaactttatcattactatacaactg 326 ||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 23422 tcagatttacagtactttgaggaactttatcagtactatacaactg 23377 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 113 caggtgtacagaacaataggcgaaaagtatggggtgaagtactcggaggatgagatcttg 172 ||||| ||||||||||| |||||||||||||| || || ||||| ||||||||||||||| Sbjct: 24756 caggtatacagaacaattggcgaaaagtatggagtcaactactcagaggatgagatcttg 24697 Query: 173 atgaggtaccggcaggcatattcgcagccatggggcaaatcgcggcttaggta 225 ||||| ||| || ||| ||| ||||||||||||| | ||||||||| ||||| Sbjct: 24696 atgagatacaggagggcttatgcgcagccatggggtagatcgcggctgaggta 24644
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1477_F01 Length = 158792 Score = 198 bits (100), Expect = 2e-47 Identities = 130/140 (92%) Strand = Plus / Minus Query: 356 gctaaatacgtttttgaagcattaagaagggctggtgtgagaacagctgttgtatccaac 415 |||||||| |||||||||||||| |||| ||||||||| | ||||||||||||||||||| Sbjct: 109985 gctaaatatgtttttgaagcattgagaaaggctggtgtaaaaacagctgttgtatccaac 109926 Query: 416 tttgacacccgcctccggccacttttacaggcactgaattgtgatcactggtttgatgcg 475 |||||||| || || ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 109925 tttgacacacgtcttcggccacttttacaggccctgaattgtgatcactggtttgatgca 109866 Query: 476 gttgctgtatctgctgaggt 495 |||||||||||||||||||| Sbjct: 109865 gttgctgtatctgctgaggt 109846 Score = 176 bits (89), Expect = 6e-41 Identities = 110/117 (94%) Strand = Plus / Minus Query: 1 gggggcccgggagtactacgactaccggcgggccatctacggcgaaatcacgcacaaggc 60 |||||| ||||||||||||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 112091 gggggcgcgggagtactacgactaccggagggccatctacggcgacatcacccacaaggc 112032 Query: 61 catcctcgtcgacgccgccggcaccctcctcgcccccaccgagcccatggcccaggt 117 ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 112031 catcctcgtcgacgccgccgggacgctcctcgcccccaccgagcccatggcgcaggt 111975 Score = 176 bits (89), Expect = 6e-41 Identities = 143/161 (88%) Strand = Plus / Minus Query: 492 aggttgcagcagaaaagccaaacccaacaatattcctgaaggcctgcgagttgttggatg 551 ||||||| || |||||||||||||||||||||||| ||||||| |||||||| || | || Sbjct: 109748 aggttgctgcggaaaagccaaacccaacaatattcttgaaggcttgcgagtttttaggtg 109689 Query: 552 tgaagcctgaagaggctgtgcatattggggacgaccgtcggaacgatctgtggggagcta 611 ||||||||||||| |||||||||||||| || ||||| |||| ||||| |||||||| | Sbjct: 109688 tgaagcctgaagaagctgtgcatattggtgatgaccgcaggaatgatctctggggagcca 109629 Query: 612 gggacgcaggctgcgatgcctggctttggggcagtgatgtt 652 |||| |||||||| ||||||||||| ||||||||||||||| Sbjct: 109628 gggatgcaggctgtgatgcctggctctggggcagtgatgtt 109588 Score = 123 bits (62), Expect = 8e-25 Identities = 95/106 (89%) Strand = Plus / Minus Query: 221 aggtatgtcgatgacgggaggcccttttggcaacatatagttagttcttctacaggctgc 280 |||||||| ||||| || |||||||| ||||| ||||||||||| ||||| || || ||| Sbjct: 110205 aggtatgtggatgatggtaggcccttctggcagcatatagttagctcttcaactggatgc 110146 Query: 281 tcagatttacagtacttcgaggaactttatcattactatacaactg 326 ||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 110145 tcagatttacagtactttgaggaactttatcagtactatacaactg 110100 Score = 105 bits (53), Expect = 2e-19 Identities = 98/113 (86%) Strand = Plus / Minus Query: 113 caggtgtacagaacaataggcgaaaagtatggggtgaagtactcggaggatgagatcttg 172 ||||| ||||||||||| |||||||||||||| || || ||||| ||||||||||||||| Sbjct: 111479 caggtatacagaacaattggcgaaaagtatggagtcaactactcagaggatgagatcttg 111420 Query: 173 atgaggtaccggcaggcatattcgcagccatggggcaaatcgcggcttaggta 225 ||||| ||| || ||| ||| ||||||||||||| | ||||||||| ||||| Sbjct: 111419 atgagatacaggagggcttatgcgcagccatggggtagatcgcggctgaggta 111367
>gb|AY108297.1| Zea mays PCO134827 mRNA sequence Length = 488 Score = 157 bits (79), Expect = 6e-35 Identities = 271/335 (80%) Strand = Plus / Plus Query: 8 cgggagtactacgactaccggcgggccatctacggcgaaatcacgcacaaggccatcctc 67 |||||||||||||||||||| | | ||||||||||| |||||||| ||| ||||| Sbjct: 17 cgggagtactacgactaccgcaagtctatctacggcgacgtcacgcaccgcgccctcctc 76 Query: 68 gtcgacgccgccggcaccctcctcgcccccaccgagcccatggcccaggtgtacagaaca 127 |||||||||| |||||||||| ||| |||| || |||||| || |||||||| | | Sbjct: 77 gtcgacgccgtcggcaccctcgtcgtccccgcccagcccaccgcgcaggtgtataagagc 136 Query: 128 ataggcgaaaagtatggggtgaagtactcggaggatgagatcttgatgaggtaccggcag 187 || || || |||||||| |||||||||||||| || |||||| ||||||| ||||||| | Sbjct: 137 attggtgagaagtatggagtgaagtactcggaagacgagatcctgatgagataccggcgg 196 Query: 188 gcatattcgcagccatggggcaaatcgcggcttaggtatgtcgatgacgggaggcccttt 247 ||||| ||| |||||||| ||| || || |||||||| ||||| ||||| ||||| Sbjct: 197 gcatacgagcaaccatggggtggatcacgtctcaggtatgtggatgatgggagaaccttt 256 Query: 248 tggcaacatatagttagttcttctacaggctgctcagatttacagtacttcgaggaactt 307 ||||| || ||||| | |||||||||||| || |||||| ||||||||| |||||||| Sbjct: 257 tggcagcacatagtcacttcttctacaggatgttcagatgcacagtactttgaggaactc 316 Query: 308 tatcattactatacaactgagaaggcctggcagct 342 ||||| |||| || || || ||||||||| |||| Sbjct: 317 tatcaatactttatgacagaaaaggcctggaagct 351
>gb|AY106595.1| Zea mays PCO125917 mRNA sequence Length = 521 Score = 143 bits (72), Expect = 8e-31 Identities = 165/196 (84%) Strand = Plus / Plus Query: 450 tgaattgtgatcactggtttgatgcggttgctgtatctgctgaggttgcagcagaaaagc 509 |||| ||||| |||||||||||||| ||||| || ||||| |||||||||||||| |||| Sbjct: 11 tgaaatgtgaccactggtttgatgcagttgcagtctctgcagaggttgcagcagagaagc 70 Query: 510 caaacccaacaatattcctgaaggcctgcgagttgttggatgtgaagcctgaagaggctg 569 | || |||| ||||||| |||||||||| ||||| ||| |||||||||||||| |||| Sbjct: 71 cgaatccaataatattcttgaaggcctgtgagttactgggcgtgaagcctgaagaagctg 130 Query: 570 tgcatattggggacgaccgtcggaacgatctgtggggagctagggacgcaggctgcgatg 629 |||| |||| ||||| ||| | || ||| | |||||||| || || ||||||||||||| Sbjct: 131 tgcacgttggcgacgatcgtagaaatgatatatggggagcgagagatgcaggctgcgatg 190 Query: 630 cctggctttggggcag 645 | ||||| |||||||| Sbjct: 191 cttggctctggggcag 206
>gb|AC157977.1| Genomic sequence for Zea mays chromosome 8 BAC clone ZMMBBb0284N04, complete sequence Length = 107631 Score = 127 bits (64), Expect = 5e-26 Identities = 100/112 (89%) Strand = Plus / Plus Query: 221 aggtatgtcgatgacgggaggcccttttggcaacatatagttagttcttctacaggctgc 280 ||||||||||||||||| ||||||||||||||| ||||||| || || || || |||||| Sbjct: 68931 aggtatgtcgatgacggaaggcccttttggcaatatatagtgagctcatcaaccggctgc 68990 Query: 281 tcagatttacagtacttcgaggaactttatcattactatacaactgagaagg 332 |||||| ||||||||||||||||||| || || ||||| ||||||||||||| Sbjct: 68991 tcagatctacagtacttcgaggaactgtaccagtactacacaactgagaagg 69042
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 115 bits (58), Expect = 2e-22 Identities = 137/162 (84%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 492 aggttgcagcagaaaagccaaacccaacaatattcctgaaggcctgcgagttgttggatg 551 ||||||| |||||||||||||||||||||||||| |||||||| || |||| || | || Sbjct: 49051 aggttgctgcagaaaagccaaacccaacaatatttctgaaggcatgtgagtctttaggtg 49110 Query: 552 tgaagcctgaagaggctgtgcatattggggacgaccgtcggaacgatctgtggggagcta 611 | || ||||||||||| |||||| | || || || ||| ||| ||| | |||||||||| Sbjct: 49111 tcaaacctgaagaggccgtgcatgtcggcgatgatcgt-agaatgatatatggggagcta 49169 Query: 612 gggacgcaggctgcgatgcctggctttggggcagtgatgttc 653 | || |||||||||||||||||||| ||||| |||||||||| Sbjct: 49170 gagatgcaggctgcgatgcctggctatggggaagtgatgttc 49211 Score = 107 bits (54), Expect = 5e-20 Identities = 126/150 (84%) Strand = Plus / Plus Query: 346 tgatcccgatgctaaatacgtttttgaagcattaagaagggctggtgtgagaacagctgt 405 |||||| |||||| || |||| ||| |||| ||||||| ||| ||||| | ||| ||||| Sbjct: 48766 tgatcctgatgctgaaaacgtatttaaagctttaagaaaggcaggtgtcaaaactgctgt 48825 Query: 406 tgtatccaactttgacacccgcctccggccacttttacaggcactgaattgtgatcactg 465 ||| ||||| ||||| ||||| || ||||| || ||||| | ||||| ||||||||||| Sbjct: 48826 tgtctccaattttgatacccgtctacggcctctgttacatgttctgaagtgtgatcactg 48885 Query: 466 gtttgatgcggttgctgtatctgctgaggt 495 ||||||||||||||| || ||||||||||| Sbjct: 48886 gtttgatgcggttgcggtctctgctgaggt 48915 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 221 aggtatgtcgatgacgggaggcccttttggcaacatatagttagttcttctacaggctgc 280 |||||||| ||||| || || ||||||||||| |||||||| | ||||||||| ||||| Sbjct: 48558 aggtatgtggatgatggtagacccttttggcagcatatagtcacttcttctactggctgt 48617 Query: 281 tcagatttacagtacttcgaggaactttatcattactata 320 |||||||| |||||||| |||||||| ||||| ||||||| Sbjct: 48618 tcagatttgcagtactttgaggaactatatcagtactata 48657 Score = 60.0 bits (30), Expect = 1e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 8 cgggagtactacgactaccggcgggccatctacggcgaaatcacgcacaaggccatcctc 67 |||||||||||||||||||| | || |||||||||| |||| ||| ||| ||||| Sbjct: 47106 cgggagtactacgactaccgcaagtccgtctacggcgacgtcacccaccgcgccctcctc 47165 Query: 68 gtcgacgccgccggcaccctcctcgccccc 97 |||||||||| |||||||||| ||| |||| Sbjct: 47166 gtcgacgccgtcggcaccctcgtcgtcccc 47195 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 137 aagtatggggtgaagtactcggaggatgagatc 169 |||||||| ||||||||||| || ||||||||| Sbjct: 47419 aagtatggagtgaagtactccgaagatgagatc 47451
>gb|AY022128.1| Oryza sativa microsatellite MRG4453 containing (TC)X18, closest to marker C596, genomic sequence Length = 236 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 53 cacaaggccatcctcgtcgacgccgccggcaccctcctcgcccccaccgagcccatggcc 112 |||||||||||||| || ||||||||||| || |||||||||||||||||||||||||| Sbjct: 4 cacaaggccatcctagttgacgccgccgggacgctcctcgcccccaccgagcccatggcg 63 Query: 113 caggt 117 ||||| Sbjct: 64 caggt 68
>gb|AC125478.14| Medicago truncatula clone mth2-31i19, complete sequence Length = 111256 Score = 75.8 bits (38), Expect = 2e-10 Identities = 131/162 (80%) Strand = Plus / Plus Query: 492 aggttgcagcagaaaagccaaacccaacaatattcctgaaggcctgcgagttgttggatg 551 |||||| |||||| || ||||| ||||| ||||| ||||| || || || | ||||||| Sbjct: 19193 aggttgaagcagagaaaccaaatccaactatatttctgaaagcatgtgaactattggatg 19252 Query: 552 tgaagcctgaagaggctgtgcatattggggacgaccgtcggaacgatctgtggggagcta 611 | || ||||| || ||||| ||| ||||||| || ||||| || ||| | ||||| || | Sbjct: 19253 taaaacctgaggatgctgttcatgttggggatgatcgtcgaaatgatatatggggtgcca 19312 Query: 612 gggacgcaggctgcgatgcctggctttggggcagtgatgttc 653 | || |||||||| ||||| ||||||||||| |||||||||| Sbjct: 19313 gagatgcaggctgtgatgcatggctttggggaagtgatgttc 19354
>gb|AY022244.1| Oryza sativa microsatellite MRG4569 containing (TG)X18, closest to marker C596, genomic sequence Length = 236 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 86 ctcctcgcccccaccgagcccatggcccaggt 117 |||||||||||||||||||||||||| ||||| Sbjct: 1 ctcctcgcccccaccgagcccatggcgcaggt 32
>ref|NM_129690.3| Arabidopsis thaliana catalytic/ hydrolase/ phosphoglycolate phosphatase AT2G41250 mRNA, complete cds Length = 1143 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 584 gaccgtcggaacgatctgtggggagctagggacgcaggctgcgatgcctggctttggggc 643 |||||| |||| ||| | ||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 827 gaccgtaggaatgatgtatggggagctagagacgcaggctgtgacgcttggctctgggga 886 Query: 644 agtga 648 ||||| Sbjct: 887 agtga 891
>gb|AY133731.1| Arabidopsis thaliana clone U19049 unknown protein (At2g41250) mRNA, complete cds Length = 904 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 584 gaccgtcggaacgatctgtggggagctagggacgcaggctgcgatgcctggctttggggc 643 |||||| |||| ||| | ||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 760 gaccgtaggaatgatgtatggggagctagagacgcaggctgtgacgcttggctctgggga 819 Query: 644 agtga 648 ||||| Sbjct: 820 agtga 824
>gb|AY070081.1| Arabidopsis thaliana unknown protein (At2g41250) mRNA, complete cds Length = 1160 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 584 gaccgtcggaacgatctgtggggagctagggacgcaggctgcgatgcctggctttggggc 643 |||||| |||| ||| | ||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 827 gaccgtaggaatgatgtatggggagctagagacgcaggctgtgacgcttggctctgggga 886 Query: 644 agtga 648 ||||| Sbjct: 887 agtga 891
>gb|AC005662.3| Arabidopsis thaliana chromosome 2 clone F13H10 map CIC11C08, complete sequence Length = 96066 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 584 gaccgtcggaacgatctgtggggagctagggacgcaggctgcgatgcctggctttggggc 643 |||||| |||| ||| | ||||||||||| ||||||||||| || || ||||| ||||| Sbjct: 70808 gaccgtaggaatgatgtatggggagctagagacgcaggctgtgacgcttggctctgggga 70867 Query: 644 agtga 648 ||||| Sbjct: 70868 agtga 70872
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 449 ctgaattgtgatcactggtttgatgcggttgctgtatctgctgaggt 495 ||||| || ||||| || |||||||| ||||||| |||||||||||| Sbjct: 21611034 ctgaaatgcgatcattgatttgatgcagttgctgaatctgctgaggt 21611080
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 449 ctgaattgtgatcactggtttgatgcggttgctgtatctgctgaggt 495 ||||| || ||||| || |||||||| ||||||| |||||||||||| Sbjct: 21539355 ctgaaatgcgatcattgatttgatgcagttgctgaatctgctgaggt 21539401
>emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa0085B23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158019 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 449 ctgaattgtgatcactggtttgatgcggttgctgtatctgctgaggt 495 ||||| || ||||| || |||||||| ||||||| |||||||||||| Sbjct: 34855 ctgaaatgcgatcattgatttgatgcagttgctgaatctgctgaggt 34809
>dbj|AB210414.1| Ciona intestinalis mRNA for transcription factor protein, complete cds, clone: ciem819m22 Length = 2938 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 543 tgttggatgtgaagcctgaaga 564 |||||||||||||||||||||| Sbjct: 2347 tgttggatgtgaagcctgaaga 2368
>dbj|AK222254.1| Ciona intestinalis cDNA, clone:ciad008k16, full insert sequence Length = 2991 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 543 tgttggatgtgaagcctgaaga 564 |||||||||||||||||||||| Sbjct: 2346 tgttggatgtgaagcctgaaga 2367
>dbj|D16415.1|WHTWZF1A Triticum aestivum gene for zinc-finger protein WZF1, complete cds Length = 2862 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Plus Query: 72 acgccgccggcaccctcctcgcccccaccg 101 ||||||||||| ||||||||||||||||| Sbjct: 1038 acgccgccggccacctcctcgcccccaccg 1067
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 tggtttgatgcggttgctgta 484 ||||||||||||||||||||| Sbjct: 1569995 tggtttgatgcggttgctgta 1569975
>gb|AC158357.4| Mus musculus BAC clone RP23-434L22 from chromosome 8, complete sequence Length = 217671 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 310 tcattactatacaactgagaa 330 ||||||||||||||||||||| Sbjct: 141496 tcattactatacaactgagaa 141476
>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06, complete sequence Length = 136143 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 tgctgaggttgcagcagaaaa 507 ||||||||||||||||||||| Sbjct: 16702 tgctgaggttgcagcagaaaa 16682 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 tgctgaggttgcagcagaaaa 507 ||||||||||||||||||||| Sbjct: 6550 tgctgaggttgcagcagaaaa 6530
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 tgctgaggttgcagcagaaaa 507 ||||||||||||||||||||| Sbjct: 159442 tgctgaggttgcagcagaaaa 159422
>emb|CR933522.11| Zebrafish DNA sequence from clone CH211-22N13 in linkage group 1, complete sequence Length = 121726 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 catatagttagttcttctaca 274 ||||||||||||||||||||| Sbjct: 1239 catatagttagttcttctaca 1259
>emb|CR387978.12| Zebrafish DNA sequence from clone DKEY-33M5 in linkage group 1, complete sequence Length = 208746 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 catatagttagttcttctaca 274 ||||||||||||||||||||| Sbjct: 762 catatagttagttcttctaca 742
>gb|AC122330.4| Mus musculus BAC clone RP23-342G7 from chromosome 18, complete sequence Length = 194291 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 ttggatgtgaagcctgaagag 565 ||||||||||||||||||||| Sbjct: 185643 ttggatgtgaagcctgaagag 185623
>emb|AL356003.9| Human DNA sequence from clone RP11-33N11 on chromosome X Contains a ribonucleoprotein pseudogene and a CpG island, complete sequence Length = 46778 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 249 ggcaacatatagttagttctt 269 ||||||||||||||||||||| Sbjct: 7537 ggcaacatatagttagttctt 7517
>emb|AL139078.2|CJ11168X5 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 5/6 Length = 263335 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 464 tggtttgatgcggttgctgta 484 ||||||||||||||||||||| Sbjct: 209165 tggtttgatgcggttgctgta 209145
>gb|DQ123841.1| Agrotis segetum nucleopolyhedrovirus, complete genome Length = 147544 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 ctcgtcgacgccgccggcacc 85 ||||||||||||||||||||| Sbjct: 19292 ctcgtcgacgccgccggcacc 19272
>gb|AC103367.11| Mus musculus chromosome 18, clone RP24-127F15, complete sequence Length = 169521 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 545 ttggatgtgaagcctgaagag 565 ||||||||||||||||||||| Sbjct: 24647 ttggatgtgaagcctgaagag 24627
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 tgctgaggttgcagcagaaaa 507 ||||||||||||||||||||| Sbjct: 17639944 tgctgaggttgcagcagaaaa 17639924 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 tgctgaggttgcagcagaaaa 507 ||||||||||||||||||||| Sbjct: 17629792 tgctgaggttgcagcagaaaa 17629772
>dbj|AK069708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031M23, full insert sequence Length = 2455 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 487 tgctgaggttgcagcagaaaa 507 ||||||||||||||||||||| Sbjct: 1780 tgctgaggttgcagcagaaaa 1800
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 57 aggccatcctcgtcgacgccgccggcacc 85 |||||| ||||| |||||||||||||||| Sbjct: 4230966 aggccaacctcggcgacgccgccggcacc 4230994
>emb|CT025538.13| Mouse DNA sequence from clone RP23-386E7 on chromosome 14, complete sequence Length = 206957 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 494 gttgcagcagaaaagccaaac 514 ||||||||||||||||||||| Sbjct: 116802 gttgcagcagaaaagccaaac 116822
>gb|BC085705.1| Rattus norvegicus staufen, RNA binding protein, homolog 2 (Drosophila), mRNA (cDNA clone MGC:93196 IMAGE:7190916), complete cds Length = 2328 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 70 cgacgccgccggcaccctcctcgccccc 97 ||||||||||||| ||||||||| |||| Sbjct: 74 cgacgccgccggctccctcctcggcccc 47
>gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0094P07, complete sequence Length = 162311 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 99871 tacagtacttcgaggaactt 99890
>ref|XM_364536.1| Magnaporthe grisea 70-15 hypothetical protein (MG09390.4) partial mRNA Length = 1890 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 caaggccatcctcgtcgacg 74 |||||||||||||||||||| Sbjct: 1002 caaggccatcctcgtcgacg 1021
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 12052444 tacagtacttcgaggaactt 12052425
>emb|AL928544.5| Mouse DNA sequence from clone RP23-358C5 on chromosome 2, complete sequence Length = 126329 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 495 ttgcagcagaaaagccaaacccaa 518 |||||||||||||| ||||||||| Sbjct: 3004 ttgcagcagaaaagtcaaacccaa 3027
>emb|AL138733.15| Human DNA sequence from clone RP1-297M16 on chromosome 6 Contains part of a novel gene and a novel gene, complete sequence Length = 65582 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 628 tgcctggctttggggcagtg 647 |||||||||||||||||||| Sbjct: 30861 tgcctggctttggggcagtg 30842
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 133537 tacagtacttcgaggaactt 133518
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 gccatcctcgtcgacgccgccggc 82 |||||||||| ||||||||||||| Sbjct: 2163710 gccatcctcgccgacgccgccggc 2163687 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 gccatcctcgtcgacgccgccggc 82 |||||||||| ||||||||||||| Sbjct: 2160278 gccatcctcgccgacgccgccggc 2160255 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 gccatcctcgtcgacgccgccggc 82 |||||||||| ||||||||||||| Sbjct: 2157731 gccatcctcgccgacgccgccggc 2157754 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 59 gccatcctcgtcgacgccgccggc 82 |||||||||| ||||||||||||| Sbjct: 2157425 gccatcctcgccgacgccgccggc 2157448 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 gccatcctcgtcgacgccgccggc 82 |||||||||| ||||||||||||| Sbjct: 1384504 gccatcctcgccgacgccgccggc 1384481 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 gccatcctcgtcgacgccgccggc 82 |||||||||| ||||||||||||| Sbjct: 1384198 gccatcctcgccgacgccgccggc 1384175 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 gccatcctcgtcgacgccgccggc 82 |||||||||| ||||||||||||| Sbjct: 1366394 gccatcctcgccgacgccgccggc 1366371 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 59 gccatcctcgtcgacgccgccggc 82 |||||||||| ||||||||||||| Sbjct: 1364252 gccatcctcgccgacgccgccggc 1364229
>gb|AC093801.3| Homo sapiens BAC clone RP11-313E19 from 4, complete sequence Length = 126929 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ggcaccctcctcgcccccac 99 |||||||||||||||||||| Sbjct: 28003 ggcaccctcctcgcccccac 28022
>gb|AC078944.5|AC078944 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0089D15, from Chromosome 10, complete sequence Length = 164679 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 155752 tacagtacttcgaggaactt 155771
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 5197528 tacagtacttcgaggaactt 5197509
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 4158923 tacagtacttcgaggaactt 4158942
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 cgacgccgccggcaccctcctcgc 93 ||||||||||||| |||||||||| Sbjct: 1446329 cgacgccgccggctccctcctcgc 1446352
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 12049207 tacagtacttcgaggaactt 12049188
>gb|AC137547.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0052J20, complete sequence Length = 144969 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 73024 tacagtacttcgaggaactt 73005
>gb|AC007749.3| Homo sapiens BAC clone RP11-574O16 from 2, complete sequence Length = 193644 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 632 tggctttggggcagtgatgt 651 |||||||||||||||||||| Sbjct: 22192 tggctttggggcagtgatgt 22173
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 catcctcgtcgacgccgccg 80 |||||||||||||||||||| Sbjct: 4368832 catcctcgtcgacgccgccg 4368813
>dbj|AP005744.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1512_E04 Length = 157848 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 cgacgccgccggcaccctcctcgc 93 ||||||||||||| |||||||||| Sbjct: 64442 cgacgccgccggctccctcctcgc 64465
>dbj|AP005104.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0042E08 Length = 166257 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 23170 tacagtacttcgaggaactt 23151
>dbj|AK107519.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-F07, full insert sequence Length = 2145 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 12 tacagtacttcgaggaactt 31
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 aaggcctggcagctcattga 348 |||||||||||||||||||| Sbjct: 177386 aaggcctggcagctcattga 177405
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 4159744 tacagtacttcgaggaactt 4159763
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 tacagtacttcgaggaactt 307 |||||||||||||||||||| Sbjct: 5264005 tacagtacttcgaggaactt 5263986 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,662,641 Number of Sequences: 3902068 Number of extensions: 4662641 Number of successful extensions: 97425 Number of sequences better than 10.0: 62 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96616 Number of HSP's gapped (non-prelim): 803 length of query: 653 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 630 effective length of database: 17,143,297,704 effective search space: 10800277553520 effective search space used: 10800277553520 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
