ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal29e02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY587885.1| Triticum aestivum ubiquitin fusion degradation protein (UFD1) mRNA, complete cds Length = 1135 Score = 950 bits (479), Expect = 0.0 Identities = 533/551 (96%) Strand = Plus / Plus Query: 68 tcctcttcggccgaccggagaaccggtgcttaggttcaaaaggggttaaccttcctgtcc 127 |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||| ||||| Sbjct: 71 tcctcttcggccgagcggagaaccggtgcttaggctcaaaagggtttaaccttcttgtcc 130 Query: 128 atgaatatgtattttgaaggctacggttaccgtggaagtacttttgagcagacctatcgc 187 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 131 atgaatatgtatttcgaaggctatggttaccgtggaagtacttttgagcagacctatcgc 190 Query: 188 tgctaccctgcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatg 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 tgctaccctgcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatg 250 Query: 248 ccaccttcggcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaa 307 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 251 ccaccttcggcacttgatcgtcttgcgtctctgcatattgagtaccctatgctatttgaa 310 Query: 308 gtccgcaacacaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaa 367 || |||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 311 gtacgcaacgcagcagcagaacgcacttcacactgtggtgtcctagagttcattgcagaa 370 Query: 368 gaaggcatgatctacatgccatactggatgatgcaaaatcttcttttgcaagaaggagat 427 ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 371 gaaggcatgatctacatgccatactgggtgatgcaaaatcttcttttgcgagaaggagat 430 Query: 428 atggtgtttataaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcat 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 atggtgtttataaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcat 490 Query: 488 acaactgacttcttggacatttcaaatcccaaagcgatcttggaaaaaactttgcggaac 547 ||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||| Sbjct: 491 acaactgacttcttggacatttcaaatcccaaagcaatcttggaagagactttgcggaac 550 Query: 548 tactcttgtctaaccactggtgacagcattatggtggcatataataacaagaagtactac 607 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 551 tactcttgtctaaccactggtgacagcattatggtggcatataataacaaggggtactac 610 Query: 608 attgatatagt 618 ||||||||||| Sbjct: 611 attgatatagt 621 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Plus Query: 22 gccgaaaccgaggacgactcttct 45 |||||||||||||||||||||||| Sbjct: 1 gccgaaaccgaggacgactcttct 24
>ref|XM_464339.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1397 Score = 599 bits (302), Expect = e-168 Identities = 440/486 (90%) Strand = Plus / Plus Query: 133 tatgtattttgaaggctacggttaccgtggaagtacttttgagcagacctatcgctgcta 192 ||||||||| |||||||| || |||||||||||||| || |||||||| ||||||||||| Sbjct: 212 tatgtatttcgaaggctatggctaccgtggaagtaccttcgagcagacatatcgctgcta 271 Query: 193 ccctgcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccacc 252 |||||| ||||| ||||||||||| ||||||||| |||||||||||||||| |||||||| Sbjct: 272 ccctgcgtctttcattgacaagcctcagcttgaaactggtgacaaaattattatgccacc 331 Query: 253 ttcggcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccg 312 ||| || || |||||||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 332 ttctgctctggatcgtctagcatctctgcatattgaatatcctatgctatttgaagtcca 391 Query: 313 caacacaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaagg 372 |||| | | ||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 caacgcggcagcagaacggacttcacactgtggtgtcctggagttcattgcagaagaagg 451 Query: 373 catgatctacatgccatactggatgatgcaaaatcttcttttgcaagaaggagatatggt 432 |||||||||||||||||| ||||||||||||||||||||| | ||| || |||||||| Sbjct: 452 catgatctacatgccatattggatgatgcaaaatcttcttctaacagagggggatatggt 511 Query: 433 gtttataaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcatacaac 492 ||| |||||||||||||| ||||| || || ||||||||||||||||||||||| ||||| Sbjct: 512 gttcataaaaaatgccaatctccctaaaggaacatatgtgaagctgcagcctcacacaac 571 Query: 493 tgacttcttggacatttcaaatcccaaagcgatcttggaaaaaactttgcggaactactc 552 |||||||| ||||||||||| || ||||| |||||||| ||||| |||||||| ||||| Sbjct: 572 agacttcttagacatttcaaacccaaaagcaatcttggagaaaacattgcggaattactc 631 Query: 553 ttgtctaaccactggtgacagcattatggtggcatataataacaagaagtactacattga 612 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 632 ttgtctaaccactggtgacagcattatggtagcatataataacaagaaatactacattga 691 Query: 613 tatagt 618 |||||| Sbjct: 692 tatagt 697
>dbj|AK121784.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094A11, full insert sequence Length = 1398 Score = 591 bits (298), Expect = e-165 Identities = 439/486 (90%) Strand = Plus / Plus Query: 133 tatgtattttgaaggctacggttaccgtggaagtacttttgagcagacctatcgctgcta 192 ||||||||| |||||||| || |||||||||||||| || |||||||| ||||||||||| Sbjct: 213 tatgtatttcgaaggctatggctaccgtggaagtaccttcgagcagacatatcgctgcta 272 Query: 193 ccctgcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccacc 252 | |||| ||||| ||||||||||| ||||||||| |||||||||||||||| |||||||| Sbjct: 273 cactgcgtctttcattgacaagcctcagcttgaaactggtgacaaaattattatgccacc 332 Query: 253 ttcggcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccg 312 ||| || || |||||||| || |||||||||||||| |||||||||||||||||||||| Sbjct: 333 ttctgctctggatcgtctagcatctctgcatattgaatatcctatgctatttgaagtcca 392 Query: 313 caacacaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaagg 372 |||| | | ||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 393 caacgcggcagcagaacggacttcacactgtggtgtcctggagttcattgcagaagaagg 452 Query: 373 catgatctacatgccatactggatgatgcaaaatcttcttttgcaagaaggagatatggt 432 |||||||||||||||||| ||||||||||||||||||||| | ||| || |||||||| Sbjct: 453 catgatctacatgccatattggatgatgcaaaatcttcttctaacagagggggatatggt 512 Query: 433 gtttataaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcatacaac 492 ||| |||||||||||||| ||||| || || ||||||||||||||||||||||| ||||| Sbjct: 513 gttcataaaaaatgccaatctccctaaaggaacatatgtgaagctgcagcctcacacaac 572 Query: 493 tgacttcttggacatttcaaatcccaaagcgatcttggaaaaaactttgcggaactactc 552 |||||||| ||||||||||| || ||||| |||||||| ||||| |||||||| ||||| Sbjct: 573 agacttcttagacatttcaaacccaaaagcaatcttggagaaaacattgcggaattactc 632 Query: 553 ttgtctaaccactggtgacagcattatggtggcatataataacaagaagtactacattga 612 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 633 ttgtctaaccactggtgacagcattatggtagcatataataacaagaaatactacattga 692 Query: 613 tatagt 618 |||||| Sbjct: 693 tatagt 698
>gb|BT016689.1| Zea mays clone Contig522 mRNA sequence Length = 1379 Score = 565 bits (285), Expect = e-158 Identities = 417/461 (90%) Strand = Plus / Plus Query: 158 cgtggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagcca 217 |||||||||||||| |||||||| ||||||||||| ||||| ||||| || ||||||||| Sbjct: 175 cgtggaagtactttcgagcagacatatcgctgctatcctgcgtctttcatcgacaagcca 234 Query: 218 cagcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtct 277 || ||||| | |||||||||||||| |||||||| || || |||||||||||||| ||| Sbjct: 235 caacttgaggccggtgacaaaattataatgccaccatcagctcttgatcgtcttgcatct 294 Query: 278 ctgcatattgagtatcctatgctatttgaagtccgcaacacaggagcagaacgtacttca 337 ||||||||||| || ||||||||||||||||||| ||| ||| ||||||||| ||||| Sbjct: 295 ctgcatattgaataccctatgctatttgaagtccacaatgcagcagcagaacggacttcg 354 Query: 338 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 397 || |||||||| || |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 355 cattgtggtgttctggagttcattgcagaagaaggcatgatctacatgccatattggatg 414 Query: 398 atgcaaaatcttcttttgcaagaaggagatatggtgtttataaaaaatgccaacctccca 457 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 415 atgcaaaatcttcttttgcaagagggagatatggtgttcataaaaaatgccaacctcccc 474 Query: 458 aagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaatccc 517 |||||||||||||||||| |||||||||||||||| ||||| | || |||||||| ||| Sbjct: 475 aagggcacatatgtgaagttgcagcctcatacaacagactttctagatatttcaaacccc 534 Query: 518 aaagcgatcttggaaaaaactttgcggaactactcttgtctaaccactggtgacagcatt 577 ||||| |||||||| |||||||||||||||| ||||||||||| || |||||||||||| Sbjct: 535 aaagcaatcttggagaaaactttgcggaacttttcttgtctaactacaggtgacagcatt 594 Query: 578 atggtggcatataataacaagaagtactacattgatatagt 618 ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 595 atggttgcatataataacaagaagtactacattgatatagt 635
>gb|AY112612.1| Zea mays CL14668_1 mRNA sequence Length = 1298 Score = 519 bits (262), Expect = e-144 Identities = 431/486 (88%), Gaps = 1/486 (0%) Strand = Plus / Plus Query: 134 atgtattttgaaggctacggttaccgtggaagtacttttgagcagacctatcgctgctac 193 ||||| || |||||||| || | ||||||||||||||| |||||||| ||||||||||| Sbjct: 118 atgtacttcgaaggctatggcttccgtggaagtactttcgagcagacatatcgctgctat 177 Query: 194 cctgcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccacct 253 ||||| ||||| || ||||||||||| ||||| | |||||||||||||| |||||||| Sbjct: 178 cctgcgtctttcatcgacaagccacaacttgaggccggtgacaaaattataatgccacca 237 Query: 254 tcggcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccgc 313 || || |||||||||||||| |||||||||||||| || ||||||||||||||||||| | Sbjct: 238 tcagctcttgatcgtcttgcatctctgcatattgaataccctatgctatttgaagtccac 297 Query: 314 aacacaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaaggc 373 || ||| ||||||||| ||||| || |||||||| || ||||||||||||||||||||| Sbjct: 298 aatgcagcagcagaacggacttcgcattgtggtgttctggagttcattgcagaagaaggc 357 Query: 374 atgatctacatgccatactggatgatgcaaaatcttcttttgcaagaaggagatatggtg 433 ||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||| | Sbjct: 358 atgatctacatgccatattggatgatgcaaaatcttctgttgcaagagggagatatggcg 417 Query: 434 ttta-taaaaaatgccaacctcccaaagggcacatatgtgaagctgcagcctcatacaac 492 | | | |||||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct: 418 ctcacgagaaaatgccaacctccccaagggcacatatgtgaagttgcagcctcatacaac 477 Query: 493 tgacttcttggacatttcaaatcccaaagcgatcttggaaaaaactttgcggaactactc 552 ||||| | || |||||||| |||||||| |||||||| |||||||||||||||| || Sbjct: 478 agactttctagatatttcaaaccccaaagcaatcttggagaaaactttgcggaacttttc 537 Query: 553 ttgtctaaccactggtgacagcattatggtggcatataataacaagaagtactacattga 612 ||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 538 ttgtctaactacaggtgacagcattatggttgcatataataacaagaagtactacattga 597 Query: 613 tatagt 618 |||||| Sbjct: 598 tatagt 603
>gb|AY087347.1| Arabidopsis thaliana clone 34470 mRNA, complete sequence Length = 1201 Score = 186 bits (94), Expect = 6e-44 Identities = 196/230 (85%) Strand = Plus / Plus Query: 197 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 256 ||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||| || Sbjct: 162 gcatcttttattgacaagccacaacttgaaagtggtgacaagattataatgccaccatca 221 Query: 257 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccgcaac 316 || ||||||||||| || ||| |||||||||| ||||| ||||| ||||| | || || Sbjct: 222 gcccttgatcgtctagcctctttgcatattgactatccgatgctgtttgagcttcgtaat 281 Query: 317 acaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaaggcatg 376 | ||| |||||| | |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 282 gctggaattgaacgtgttacacactgtggagtccttgagttcattgcagaagaaggcatg 341 Query: 377 atctacatgccatactggatgatgcaaaatcttcttttgcaagaaggaga 426 || ||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 342 atttacatgccatattggatgatgcaaaatctgctgctgcaagaaggaga 391
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 174 bits (88), Expect = 2e-40 Identities = 109/116 (93%) Strand = Plus / Plus Query: 275 tctctgcatattgagtatcctatgctatttgaagtccgcaacacaggagcagaacgtact 334 |||||||||||||| |||||||||||||||||||||| |||| | | ||||||||| ||| Sbjct: 4565036 tctctgcatattgaatatcctatgctatttgaagtccacaacgcggcagcagaacggact 4565095 Query: 335 tcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccata 390 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4565096 tcacactgtggtgtcctggagttcattgcagaagaaggcatgatctacatgccata 4565151 Score = 145 bits (73), Expect = 2e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 526 cttggaaaaaactttgcggaactactcttgtctaaccactggtgacagcattatggtggc 585 |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 4565509 cttggagaaaacattgcggaattactcttgtctaaccactggtgacagcattatggtagc 4565568 Query: 586 atataataacaagaagtactacattgatatagt 618 ||||||||||||||| ||||||||||||||||| Sbjct: 4565569 atataataacaagaaatactacattgatatagt 4565601 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 394 gatgatgcaaaatcttcttttgcaagaaggagatatggtgtttataaaaaatgccaacct 453 ||||||||||||||||||| | ||| || ||||||||||| |||||||||||||| || Sbjct: 4565229 gatgatgcaaaatcttcttctaacagagggggatatggtgttcataaaaaatgccaatct 4565288 Query: 454 cccaaagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaa 513 ||| || || ||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 4565289 ccctaaaggaacatatgtgaagctgcagcctcacacaacagacttcttagacatttcaaa 4565348 Query: 514 tcccaaagc 522 || ||||| Sbjct: 4565349 cccaaaagc 4565357 Score = 93.7 bits (47), Expect = 7e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 136 gtattttgaaggctacggttaccgtggaagtacttttgagcagacctatcgctgctaccc 195 |||||| |||||||| || |||||||||||||| || |||||||| |||||||||||||| Sbjct: 4564165 gtatttcgaaggctatggctaccgtggaagtaccttcgagcagacatatcgctgctaccc 4564224 Query: 196 tgcatcttttattgacaag 214 ||| ||||| ||||||||| Sbjct: 4564225 tgcgtctttcattgacaag 4564243
>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1297_C09 Length = 163378 Score = 174 bits (88), Expect = 2e-40 Identities = 109/116 (93%) Strand = Plus / Plus Query: 275 tctctgcatattgagtatcctatgctatttgaagtccgcaacacaggagcagaacgtact 334 |||||||||||||| |||||||||||||||||||||| |||| | | ||||||||| ||| Sbjct: 100415 tctctgcatattgaatatcctatgctatttgaagtccacaacgcggcagcagaacggact 100474 Query: 335 tcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccata 390 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100475 tcacactgtggtgtcctggagttcattgcagaagaaggcatgatctacatgccata 100530 Score = 145 bits (73), Expect = 2e-31 Identities = 88/93 (94%) Strand = Plus / Plus Query: 526 cttggaaaaaactttgcggaactactcttgtctaaccactggtgacagcattatggtggc 585 |||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 100888 cttggagaaaacattgcggaattactcttgtctaaccactggtgacagcattatggtagc 100947 Query: 586 atataataacaagaagtactacattgatatagt 618 ||||||||||||||| ||||||||||||||||| Sbjct: 100948 atataataacaagaaatactacattgatatagt 100980 Score = 129 bits (65), Expect = 1e-26 Identities = 113/129 (87%) Strand = Plus / Plus Query: 394 gatgatgcaaaatcttcttttgcaagaaggagatatggtgtttataaaaaatgccaacct 453 ||||||||||||||||||| | ||| || ||||||||||| |||||||||||||| || Sbjct: 100608 gatgatgcaaaatcttcttctaacagagggggatatggtgttcataaaaaatgccaatct 100667 Query: 454 cccaaagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaa 513 ||| || || ||||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 100668 ccctaaaggaacatatgtgaagctgcagcctcacacaacagacttcttagacatttcaaa 100727 Query: 514 tcccaaagc 522 || ||||| Sbjct: 100728 cccaaaagc 100736 Score = 93.7 bits (47), Expect = 7e-16 Identities = 71/79 (89%) Strand = Plus / Plus Query: 136 gtattttgaaggctacggttaccgtggaagtacttttgagcagacctatcgctgctaccc 195 |||||| |||||||| || |||||||||||||| || |||||||| |||||||||||||| Sbjct: 99544 gtatttcgaaggctatggctaccgtggaagtaccttcgagcagacatatcgctgctaccc 99603 Query: 196 tgcatcttttattgacaag 214 ||| ||||| ||||||||| Sbjct: 99604 tgcgtctttcattgacaag 99622
>ref|NM_001036307.1| Arabidopsis thaliana unknown protein AT2G21270 transcript variant AT2G21270.2 mRNA, complete cds Length = 1716 Score = 170 bits (86), Expect = 3e-39 Identities = 194/230 (84%) Strand = Plus / Plus Query: 197 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 256 ||||||||||| ||||||||||| |||||| ||||||||| ||||| |||||||| || Sbjct: 571 gcatcttttatcgacaagccacaacttgaaagtggtgacaagattataatgccaccatca 630 Query: 257 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccgcaac 316 || ||||||||||| || ||| |||||||||| ||||| ||||| ||||| | || || Sbjct: 631 gcccttgatcgtctagcctctttgcatattgactatccgatgctgtttgagcttcgtaat 690 Query: 317 acaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaaggcatg 376 | ||| |||||| | |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 691 gctggaattgaacgtgttacacactgtggagtccttgagttcattgcagaagaaggcatg 750 Query: 377 atctacatgccatactggatgatgcaaaatcttcttttgcaagaaggaga 426 || ||||||||||| ||||||||||| ||||| || ||||||||||||| Sbjct: 751 atttacatgccatattggatgatgcagaatctgctgctgcaagaaggaga 800
>ref|NM_127699.2| Arabidopsis thaliana unknown protein AT2G21270 transcript variant AT2G21270.1 mRNA, complete cds Length = 1204 Score = 170 bits (86), Expect = 3e-39 Identities = 194/230 (84%) Strand = Plus / Plus Query: 197 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 256 ||||||||||| ||||||||||| |||||| ||||||||| ||||| |||||||| || Sbjct: 162 gcatcttttatcgacaagccacaacttgaaagtggtgacaagattataatgccaccatca 221 Query: 257 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccgcaac 316 || ||||||||||| || ||| |||||||||| ||||| ||||| ||||| | || || Sbjct: 222 gcccttgatcgtctagcctctttgcatattgactatccgatgctgtttgagcttcgtaat 281 Query: 317 acaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaaggcatg 376 | ||| |||||| | |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 282 gctggaattgaacgtgttacacactgtggagtccttgagttcattgcagaagaaggcatg 341 Query: 377 atctacatgccatactggatgatgcaaaatcttcttttgcaagaaggaga 426 || ||||||||||| ||||||||||| ||||| || ||||||||||||| Sbjct: 342 atttacatgccatattggatgatgcagaatctgctgctgcaagaaggaga 391
>emb|BX819179.1|CNS0AA8E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZB11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1551 Score = 170 bits (86), Expect = 3e-39 Identities = 194/230 (84%) Strand = Plus / Plus Query: 197 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 256 ||||||||||| ||||||||||| |||||| ||||||||| ||||| |||||||| || Sbjct: 571 gcatcttttatcgacaagccacaacttgaaagtggtgacaagattataatgccaccatca 630 Query: 257 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttgaagtccgcaac 316 || ||||||||||| || ||| |||||||||| ||||| ||||| ||||| | || || Sbjct: 631 gcccttgatcgtctagcctctttgcatattgactatccgatgctgtttgagcttcgtaat 690 Query: 317 acaggagcagaacgtacttcacactgtggtgtcctagagttcattgcagaagaaggcatg 376 | ||| |||||| | |||||||||| ||||| |||||||||||||||||||||||| Sbjct: 691 gctggaattgaacgtgttacacactgtggagtccttgagttcattgcagaagaaggcatg 750 Query: 377 atctacatgccatactggatgatgcaaaatcttcttttgcaagaaggaga 426 || ||||||||||| ||||||||||| ||||| || ||||||||||||| Sbjct: 751 atttacatgccatattggatgatgcagaatctgctgctgcaagaaggaga 800
>ref|XM_473602.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 963 Score = 95.6 bits (48), Expect = 2e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 334 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 393 ||||||||||||||| || || || | |||||||||||||||||| |||||| ||||| Sbjct: 201 ttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactg 260 Query: 394 gatgatgcaaaatcttcttttgcaagaaggagatatggtgtttataaaaaatgccaacct 453 |||||||||||| | ||| | ||||| || || | || | |||||||| | | ||| Sbjct: 261 gatgatgcaaaacatgcttcttcaagagggtgacactgtccgtgtaaaaaatacaaccct 320 Query: 454 cccaaagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaa 513 || ||||| |||||||| ||| |||||||||| ||||||||||| |||||||| ||||| Sbjct: 321 tcccaagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaa 380 Query: 514 tcccaaagcgatcttggaaaaaac 537 ||| || || ||| |||| ||||| Sbjct: 381 tccgaaggccatcctggagaaaac 404 Score = 75.8 bits (38), Expect = 2e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 197 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 256 |||||||| ||||||||||||| || ||| ||| |||||| | || |||||||| || Sbjct: 64 gcatctttctttgacaagccacacctggaaggtggcgacaaagtaattatgccaccatct 123 Query: 257 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttga 306 || |||||||| ||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 124 gctcttgatcggcttgcttctctgcacattgaatatcctatgctgtttga 173
>dbj|AK073711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033061G23, full insert sequence Length = 1306 Score = 95.6 bits (48), Expect = 2e-16 Identities = 165/204 (80%) Strand = Plus / Plus Query: 334 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 393 ||||||||||||||| || || || | |||||||||||||||||| |||||| ||||| Sbjct: 356 ttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactg 415 Query: 394 gatgatgcaaaatcttcttttgcaagaaggagatatggtgtttataaaaaatgccaacct 453 |||||||||||| | ||| | ||||| || || | || | |||||||| | | ||| Sbjct: 416 gatgatgcaaaacatgcttcttcaagagggtgacactgtccgtgtaaaaaatacaaccct 475 Query: 454 cccaaagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaa 513 || ||||| |||||||| ||| |||||||||| ||||||||||| |||||||| ||||| Sbjct: 476 tcccaagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaa 535 Query: 514 tcccaaagcgatcttggaaaaaac 537 ||| || || ||| |||| ||||| Sbjct: 536 tccgaaggccatcctggagaaaac 559 Score = 75.8 bits (38), Expect = 2e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 197 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 256 |||||||| ||||||||||||| || ||| ||| |||||| | || |||||||| || Sbjct: 219 gcatctttctttgacaagccacacctggaaggtggcgacaaagtaattatgccaccatct 278 Query: 257 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttga 306 || |||||||| ||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 279 gctcttgatcggcttgcttctctgcacattgaatatcctatgctgtttga 328
>ref|NM_202980.1| Arabidopsis thaliana unknown protein AT4G38930 transcript variant AT4G38930.2 mRNA, complete cds Length = 1177 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 338 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 397 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 274 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 333 Query: 398 atgcaaaatcttcttttgcaagaaggagatatggtg 433 ||||| ||| | || |||||||||||||| |||||| Sbjct: 334 atgcagaatttgctgttgcaagaaggagacatggtg 369 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 160 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 219 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 96 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 155 Query: 220 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 279 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 156 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 215 Query: 280 gcatattgagtatcctatgctatttgaa 307 ||| ||||| ||||| ||||| |||||| Sbjct: 216 gcagattgattatccaatgctctttgaa 243
>ref|NM_120053.2| Arabidopsis thaliana unknown protein AT4G38930 transcript variant AT4G38930.1 mRNA, complete cds Length = 1202 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 338 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 397 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 294 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 353 Query: 398 atgcaaaatcttcttttgcaagaaggagatatggtg 433 ||||| ||| | || |||||||||||||| |||||| Sbjct: 354 atgcagaatttgctgttgcaagaaggagacatggtg 389 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 160 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 219 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 116 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 175 Query: 220 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 279 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 176 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 235 Query: 280 gcatattgagtatcctatgctatttgaa 307 ||| ||||| ||||| ||||| |||||| Sbjct: 236 gcagattgattatccaatgctctttgaa 263
>gb|AY132013.1| Arabidopsis thaliana AT4g38930/F19H22_30 mRNA, complete cds Length = 936 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 338 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 397 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 205 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 264 Query: 398 atgcaaaatcttcttttgcaagaaggagatatggtg 433 ||||| ||| | || |||||||||||||| |||||| Sbjct: 265 atgcagaatttgctgttgcaagaaggagacatggtg 300 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 160 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 219 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 27 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 86 Query: 220 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 279 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 87 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 146 Query: 280 gcatattgagtatcctatgctatttgaa 307 ||| ||||| ||||| ||||| |||||| Sbjct: 147 gcagattgattatccaatgctctttgaa 174
>gb|AF419602.1|AF419602 Arabidopsis thaliana AT4g38930/F19H22_30 mRNA, complete cds Length = 1222 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 338 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 397 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 294 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 353 Query: 398 atgcaaaatcttcttttgcaagaaggagatatggtg 433 ||||| ||| | || |||||||||||||| |||||| Sbjct: 354 atgcagaatttgctgttgcaagaaggagacatggtg 389 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 160 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 219 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 116 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 175 Query: 220 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 279 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 176 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 235 Query: 280 gcatattgagtatcctatgctatttgaa 307 ||| ||||| ||||| ||||| |||||| Sbjct: 236 gcagattgattatccaatgctctttgaa 263
>dbj|AK221534.1| Arabidopsis thaliana mRNA for putative ubiquitin-dependent proteolytic protein, complete cds, clone: RAFL07-69-M16 Length = 1195 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 338 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 397 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 294 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 353 Query: 398 atgcaaaatcttcttttgcaagaaggagatatggtg 433 ||||| ||| | || |||||||||||||| |||||| Sbjct: 354 atgcagaatttgctgttgcaagaaggagacatggtg 389 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 160 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 219 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 116 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 175 Query: 220 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 279 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 176 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 235 Query: 280 gcatattgagtatcctatgctatttgaa 307 ||| ||||| ||||| ||||| |||||| Sbjct: 236 gcagattgattatccaatgctctttgaa 263
>emb|BX826549.1|CNS0A4GV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB38ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1068 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 338 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 397 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 274 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 333 Query: 398 atgcaaaatcttcttttgcaagaaggagatatggtg 433 ||||| ||| | || |||||||||||||| |||||| Sbjct: 334 atgcagaatttgctgttgcaagaaggagacatggtg 369 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 160 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 219 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 96 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 155 Query: 220 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 279 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 156 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 215 Query: 280 gcatattgagtatcctatgctatttgaa 307 ||| ||||| ||||| ||||| |||||| Sbjct: 216 gcagattgattatccaatgctctttgaa 243
>gb|AC007142.7| Arabidopsis thaliana chromosome 2 clone F7O24 map mi238, complete sequence Length = 20078 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 336 cacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccata 390 |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 262 cacactgtggagtccttgagttcattgcagaagaaggcatgatttacatgccata 208
>gb|AC006841.7| Arabidopsis thaliana chromosome 2 clone F3K23 map mi148, complete sequence Length = 125045 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 336 cacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccata 390 |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 5819 cacactgtggagtccttgagttcattgcagaagaaggcatgatttacatgccata 5873
>gb|DQ191648.1| Solanum tuberosum unknown mRNA Length = 1244 Score = 81.8 bits (41), Expect = 2e-12 Identities = 113/137 (82%) Strand = Plus / Plus Query: 170 tttgagcagacctatcgctgctaccctgcatcttttattgacaagccacagcttgaatct 229 ||||||||||| || || ||||| ||||||||||| ||||| |||||||| || ||| | Sbjct: 138 tttgagcagacgtaccggtgctatcctgcatctttcattgataagccacaactagaaaat 197 Query: 230 ggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattgag 289 || ||||||||||| ||||| || || || ||||||||||| || || || || ||||| Sbjct: 198 ggagacaaaattataatgcctccctctgctcttgatcgtctagcatcacttcacattgat 257 Query: 290 tatcctatgctatttga 306 ||||| ||| ||||||| Sbjct: 258 tatccaatgttatttga 274 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 353 gagttcattgcagaagaaggcatgatctacatgccatactggatgatgcaaaat 406 ||||||||||||||||| |||||||| || |||||||| ||||||||| ||||| Sbjct: 321 gagttcattgcagaagagggcatgatatatatgccatattggatgatggaaaat 374
>emb|BX827766.1|CNS0A4F5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1061 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Plus Query: 338 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactggatg 397 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || ||||||||| Sbjct: 274 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactggatg 333 Query: 398 atgcaaaatcttcttttgcaagaaggagatatggtg 433 ||||| ||| | || |||| ||||||||| |||||| Sbjct: 334 atgcagaatttgctgttgcgagaaggagacatggtg 369 Score = 71.9 bits (36), Expect = 2e-09 Identities = 120/148 (81%) Strand = Plus / Plus Query: 160 tggaagtacttttgagcagacctatcgctgctaccctgcatcttttattgacaagccaca 219 ||||| ||| ||||||||||| || || || || || |||| |||||||| ||||| || Sbjct: 96 tggaactacctttgagcagacttaccggtgttatccctcatcctttattgataagcctca 155 Query: 220 gcttgaatctggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctct 279 ||||| ||||||||| ||||| |||||||| || || ||||||||||| || ||| | Sbjct: 156 aattgaaagtggtgacaagattataatgccaccatcagcccttgatcgtctagcttcttt 215 Query: 280 gcatattgagtatcctatgctatttgaa 307 ||| ||||| ||||| ||||| |||||| Sbjct: 216 gcagattgattatccaatgctctttgaa 243
>gb|AY105875.1| Zea mays PCO125270 mRNA sequence Length = 1555 Score = 77.8 bits (39), Expect = 4e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 458 aagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaatccc 517 ||||||||||||||||| |||| ||||| |||||||| || |||| |||||||| || Sbjct: 720 aagggcacatatgtgaaattgcaacctcacacaactgattttctggatatttcaaacccg 779 Query: 518 aaagcgatcttggaaaaaacttt 540 ||||| ||||||||||||||||| Sbjct: 780 aaagccatcttggaaaaaacttt 802 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 334 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 393 ||||||||||||||| | ||||| |||||||||||||||||||| |||||| || || Sbjct: 596 ttcacactgtggtgttttggagtttgttgcagaagaaggcatgatcatcatgccctattg 655 Query: 394 gatgatgcaaaa 405 |||||||||||| Sbjct: 656 gatgatgcaaaa 667 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 245 atgccaccttcggcacttgatcgtcttgcgtctctgcatattgagtatcctatgctattt 304 ||||||||||| || |||||||||||||| || |||| || ||||| |||||||||||| Sbjct: 507 atgccaccttctgcccttgatcgtcttgcttccttgcacatcgagtaccctatgctattt 566 Query: 305 ga 306 || Sbjct: 567 ga 568
>dbj|AK119957.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-C12, full insert sequence Length = 1108 Score = 75.8 bits (38), Expect = 2e-10 Identities = 92/110 (83%) Strand = Plus / Plus Query: 197 gcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccaccttcg 256 |||||||| ||||||||||||| || ||| ||| |||||| | || |||||||| || Sbjct: 193 gcatctttctttgacaagccacacctggaaggtggcgacaaagtaattatgccaccatct 252 Query: 257 gcacttgatcgtcttgcgtctctgcatattgagtatcctatgctatttga 306 || |||||||| ||||| |||||||| ||||| ||||||||||| ||||| Sbjct: 253 gctcttgatcggcttgcttctctgcacattgaatatcctatgctgtttga 302 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 334 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 393 ||||||||||||||| || || || | |||||||||||||||||| |||||| ||||| Sbjct: 330 ttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactg 389 Query: 394 gatgatgcaaaa 405 |||||||||||| Sbjct: 390 gatgatgcaaaa 401 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 458 aagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaatcc 516 ||||| |||||||| ||| |||||||||| ||||||||||| |||||||| |||||||| Sbjct: 454 aagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaatcc 512
>gb|BT012760.1| Lycopersicon esculentum clone 113704F, mRNA sequence Length = 1128 Score = 73.8 bits (37), Expect = 6e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 170 tttgagcagacctatcgctgctaccctgcatcttttattgacaagccacagcttgaatct 229 ||||||||||| || || ||||| ||||||||||| ||||| |||||||| | ||| | Sbjct: 108 tttgagcagacttaccggtgctatcctgcatctttcattgataagccacaaatagaaaat 167 Query: 230 ggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattgag 289 || ||||||||||| ||||| || || || ||||||||||| || || || |||||||| Sbjct: 168 ggagacaaaattataatgcctccctctgctcttgatcgtctagcatcacttcatattgat 227 Query: 290 tatcc 294 ||||| Sbjct: 228 tatcc 232 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 353 gagttcattgcagaagaaggcatgatctacatgccatactggatgatgcaaaat 406 ||||||||||||||||| ||| |||| || |||||||| ||||||||| ||||| Sbjct: 291 gagttcattgcagaagagggcttgatatatatgccatattggatgatggaaaat 344
>gb|AC155346.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH081N08, complete sequence Length = 56991 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 334 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccata 390 |||||||||||| ||||| |||||||| || |||||||||||||| ||||||||||| Sbjct: 11564 ttcacactgtggagtcctcgagttcatcgctgaagaaggcatgatttacatgccata 11620 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 537 ctttgcggaactactcttgtctaaccactggtgacagcattatggtggcatataataaca 596 ||||| |||| ||||| || ||||||||||| || ||||||||||| |||| || || | Sbjct: 11942 ctttgaggaattactcatgcctaaccactggggatagcattatggttccatacaacaata 12001 Query: 597 agaagtactacattgatatagt 618 ||||||||| || |||||||| Sbjct: 12002 agaagtactttatagatatagt 12023 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 170 tttgagcagacctatcgctgctaccctgcatcttttattgacaag 214 ||||||||||| || || ||||| |||||||||||||| |||||| Sbjct: 11017 tttgagcagacttaccggtgctatcctgcatcttttatcgacaag 11061
>ref|NM_201828.1| Arabidopsis thaliana unknown protein AT2G29070 transcript variant AT2G29070.2 mRNA, complete cds Length = 1086 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 230 ggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattga 288 |||||||||||||||||||| ||||| || || ||||||||||| ||| |||||||||| Sbjct: 184 ggtgacaaaattatcatgcctccttccgctctcgatcgtcttgcttctttgcatattga 242 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 335 tcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 394 ||||| |||||||| ||||| |||| |||||| |||||| | | ||| ||||||| ||| Sbjct: 289 tcacattgtggtgtactagaattcactgcagacgaaggcctagtttacttgccatattgg 348 Query: 395 atgatgcaaaa 405 ||||||||||| Sbjct: 349 atgatgcaaaa 359
>gb|BT011682.1| Arabidopsis thaliana At2g29070 gene, complete cds Length = 1145 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 230 ggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattga 288 |||||||||||||||||||| ||||| || || ||||||||||| ||| |||||||||| Sbjct: 164 ggtgacaaaattatcatgcctccttccgctctcgatcgtcttgcttctttgcatattga 222 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 335 tcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 394 ||||| |||||||| ||||| |||| |||||| |||||| | | ||| ||||||| ||| Sbjct: 269 tcacattgtggtgtactagaattcactgcagacgaaggcctagtttacttgccatattgg 328 Query: 395 atgatgcaaaa 405 ||||||||||| Sbjct: 329 atgatgcaaaa 339
>gb|BT012260.1| Arabidopsis thaliana At2g29070 gene, complete cds Length = 939 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 230 ggtgacaaaattatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattga 288 |||||||||||||||||||| ||||| || || ||||||||||| ||| |||||||||| Sbjct: 82 ggtgacaaaattatcatgcctccttccgctctcgatcgtcttgcttctttgcatattga 140 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 335 tcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 394 ||||| |||||||| ||||| |||| |||||| |||||| | | ||| ||||||| ||| Sbjct: 187 tcacattgtggtgtactagaattcactgcagacgaaggcctagtttacttgccatattgg 246 Query: 395 atgatgcaaaa 405 ||||||||||| Sbjct: 247 atgatgcaaaa 257
>emb|AL606639.3|OSJN00072 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020J04, complete sequence Length = 164567 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 458 aagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaatcc 516 ||||| |||||||| ||| |||||||||| ||||||||||| |||||||| |||||||| Sbjct: 130732 aagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaatcc 130790 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 334 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 393 ||||||||||||||| || || || | |||||||||||||||||| |||||| ||||| Sbjct: 130508 ttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactg 130567 Query: 394 g 394 | Sbjct: 130568 g 130568 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 275 tctctgcatattgagtatcctatgctatttga 306 |||||||| ||||| ||||||||||| ||||| Sbjct: 130449 tctctgcacattgaatatcctatgctgtttga 130480
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 458 aagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaatcc 516 ||||| |||||||| ||| |||||||||| ||||||||||| |||||||| |||||||| Sbjct: 29064078 aagggtacatatgtcaagttgcagcctcacacaactgactttttggacatctcaaatcc 29064136 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 334 ttcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactg 393 ||||||||||||||| || || || | |||||||||||||||||| |||||| ||||| Sbjct: 29063854 ttcacactgtggtgtgctggaatttgtggcagaagaaggcatgatcatcatgccctactg 29063913 Query: 394 g 394 | Sbjct: 29063914 g 29063914 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 275 tctctgcatattgagtatcctatgctatttga 306 |||||||| ||||| ||||||||||| ||||| Sbjct: 29063795 tctctgcacattgaatatcctatgctgtttga 29063826
>gb|DQ235202.1| Solanum tuberosum clone 171H05 ubiquitin fusion-degradation protein-like mRNA, complete cds Length = 1238 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 353 gagttcattgcagaagaaggcatgatctacatgccatactggatgatgcaaaat 406 ||||||||||||||||| |||||||| || |||||||| ||||||||| ||||| Sbjct: 293 gagttcattgcagaagagggcatgatatatatgccatattggatgatggaaaat 346 Score = 58.0 bits (29), Expect = 4e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 194 cctgcatcttttattgacaagccacagcttgaatctggtgacaaaattatcatgccacct 253 |||||||| || |||||||||||||| || ||| ||| ||||||||||| ||||| || Sbjct: 134 cctgcatcattcattgacaagccacaactagaaaatggagacaaaattataatgcctccc 193 Query: 254 tcggcacttgatcgtct 270 || || ||||||||||| Sbjct: 194 tctgcccttgatcgtct 210
>gb|AY535070.1| Beta vulgaris SNP marker MP0001 genomic sequence Length = 833 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 563 actggtgacagcattatggtggcatataataacaagaagtactacattga 612 ||||| || ||||| |||||||| |||||||||||||||||||||||||| Sbjct: 44 actggagatagcatcatggtggcttataataacaagaagtactacattga 93
>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence Length = 120870 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Plus Query: 341 tgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 394 |||||||| || ||||||||||| || ||||||||||| ||||||||||||||| Sbjct: 109126 tgtggtgttctggagttcattgctgaggaaggcatgatatacatgccatactgg 109179 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 455 ccaaagggcacatatgtgaagctgcagcctcatacaactgacttcttggacatttcaaat 514 |||||||| |||||||| ||| | |||||||| |||| ||||||||||| ||||| ||| Sbjct: 109352 ccaaagggaacatatgttaagttacagcctcacacaaaagacttcttggatatttccaat 109411 Query: 515 cc 516 || Sbjct: 109412 cc 109413 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 563 actggtgacagcattatggtggcatataataacaagaagtactacattgatat 615 ||||| || |||||||||||||| || ||||||||||| || || |||||||| Sbjct: 110766 actggagatagcattatggtggcttacaataacaagaaatattatattgatat 110818 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 170 tttgagcagacctatcgctgctaccctgcatcttttattga 210 ||||||||||| ||||| || |||||||| ||||||||||| Sbjct: 108445 tttgagcagacgtatcgatgttaccctgcttcttttattga 108485 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 275 tctctgcatattgagtatcctatgctatttgaa 307 |||||||||||||| ||||| ||| |||||||| Sbjct: 109060 tctctgcatattgattatccgatgttatttgaa 109092
>ref|NM_128464.2| Arabidopsis thaliana unknown protein AT2G29070 transcript variant AT2G29070.1 mRNA, complete cds Length = 1169 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 335 tcacactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 394 ||||| |||||||| ||||| |||| |||||| |||||| | | ||| ||||||| ||| Sbjct: 372 tcacattgtggtgtactagaattcactgcagacgaaggcctagtttacttgccatattgg 431 Query: 395 atgatgcaaaa 405 ||||||||||| Sbjct: 432 atgatgcaaaa 442 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 240 ttatcatgccaccttcggcacttgatcgtcttgcgtctctgcatattga 288 |||||||||| ||||| || || ||||||||||| ||| |||||||||| Sbjct: 277 ttatcatgcctccttccgctctcgatcgtcttgcttctttgcatattga 325
>emb|BX062595.1|CNS09KGN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC43DG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1023 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 368 gaaggcatgatctacatgccatactggatgatgcaaaatct 408 ||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 778 gaaggcaaaatctacatgccctactggatgatgcacaatct 738
>emb|BX062594.1|CNS09KGM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC43DG09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1016 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 368 gaaggcatgatctacatgccatactggatgatgcaaaatct 408 ||||||| ||||||||||| |||||||||||||| ||||| Sbjct: 347 gaaggcaaaatctacatgccctactggatgatgcacaatct 387
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 338 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 394 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || |||||| Sbjct: 64664 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactgg 64720 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 394 gatgatgcaaaatcttcttttgcaagaaggagatatggtg 433 ||||||||| ||| | || |||||||||||||| |||||| Sbjct: 64802 gatgatgcagaatttgctgttgcaagaaggagacatggtg 64841
>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project) Length = 100469 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Plus Query: 338 cactgtggtgtcctagagttcattgcagaagaaggcatgatctacatgccatactgg 394 ||||| || ||||| |||||||| |||||||||||| |||| ||||| || |||||| Sbjct: 26654 cactgcggagtccttgagttcatcgcagaagaaggcgtgatttacattccctactgg 26710 Score = 40.1 bits (20), Expect = 8.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 394 gatgatgcaaaatcttcttttgcaagaaggagatatggtg 433 ||||||||| ||| | || |||||||||||||| |||||| Sbjct: 26792 gatgatgcagaatttgctgttgcaagaaggagacatggtg 26831
>ref|XM_321840.2| Anopheles gambiae str. PEST ENSANGP00000020956 (ENSANGG00000018467), partial mRNA Length = 927 Score = 48.1 bits (24), Expect = 0.035 Identities = 30/32 (93%) Strand = Plus / Plus Query: 377 atctacatgccatactggatgatgcaaaatct 408 ||||||||||| |||||||||||||| ||||| Sbjct: 265 atctacatgccctactggatgatgcacaatct 296
>ref|NM_018752.2| Mus musculus transient receptor potential cation channel, subfamily M, member 1 (Trpm1), transcript variant 1, mRNA Length = 5291 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 378 tctacatgccatactggatgat 399 |||||||||||||||||||||| Sbjct: 2920 tctacatgccatactggatgat 2941
>emb|AL355352.16| Human DNA sequence from clone RP11-67K21 on chromosome 6, complete sequence Length = 169747 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 567 gtgacagcattatggtggcata 588 |||||||||||||||||||||| Sbjct: 102762 gtgacagcattatggtggcata 102783
>emb|AL356477.12| Human DNA sequence from clone RP11-470P23 on chromosome 10, complete sequence Length = 29021 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 cttcctgtccatgaatatgtat 139 |||||||||||||||||||||| Sbjct: 10985 cttcctgtccatgaatatgtat 10964
>dbj|AK148193.1| Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370046G24 product:transient receptor potential cation channel, subfamily M, member 1, full insert sequence Length = 5535 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 378 tctacatgccatactggatgat 399 |||||||||||||||||||||| Sbjct: 3182 tctacatgccatactggatgat 3203
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 392 tggatgatgcaaaatcttcttttgca 417 |||||||| ||||||||||||||||| Sbjct: 2773883 tggatgattcaaaatcttcttttgca 2773908
>gb|AC139849.5| Mus musculus BAC clone RP23-84M17 from chromosome 7, complete sequence Length = 189942 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 378 tctacatgccatactggatgat 399 |||||||||||||||||||||| Sbjct: 62084 tctacatgccatactggatgat 62105
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 257 gcacttgatcgtcttgcgtctctgcatatt 286 ||||||||||||| ||||| |||||||||| Sbjct: 458665 gcacttgatcgtcctgcgtttctgcatatt 458694
>gb|AY180104.1| Mus musculus transient receptor potential cation channel subfamily M member 1 long form (Trpm1) mRNA, complete cds Length = 5291 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 378 tctacatgccatactggatgat 399 |||||||||||||||||||||| Sbjct: 2920 tctacatgccatactggatgat 2941
>ref|NM_122218.2| Arabidopsis thaliana HCF136 AT5G23120 (HCF136) mRNA, complete cds Length = 1410 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ggagatatggtgtttataaaa 442 ||||||||||||||||||||| Sbjct: 592 ggagatatggtgtttataaaa 612
>gb|AC141323.9| Medicago truncatula clone mth2-6a23, complete sequence Length = 132894 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 acaaaattatcatgccacctt 254 ||||||||||||||||||||| Sbjct: 12845 acaaaattatcatgccacctt 12865
>gb|AC149805.12| Medicago truncatula clone mth2-146o17, complete sequence Length = 89758 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 acaaaattatcatgccacctt 254 ||||||||||||||||||||| Sbjct: 44994 acaaaattatcatgccacctt 45014
>gb|AY045691.1| Arabidopsis thaliana AT5g23120/MYJ24_11 mRNA, complete cds Length = 1386 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ggagatatggtgtttataaaa 442 ||||||||||||||||||||| Sbjct: 590 ggagatatggtgtttataaaa 610
>emb|BX830635.1|CNS0A01H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZC08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1343 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ggagatatggtgtttataaaa 442 ||||||||||||||||||||| Sbjct: 588 ggagatatggtgtttataaaa 608
>gb|BT004549.1| Arabidopsis thaliana At5g23120/MYJ24_11 gene, complete cds Length = 1212 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ggagatatggtgtttataaaa 442 ||||||||||||||||||||| Sbjct: 559 ggagatatggtgtttataaaa 579
>emb|Y15628.1|ATHCF136 Arabidopsis thaliana mRNA for nuclear protein HCF136 Length = 1404 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 422 ggagatatggtgtttataaaa 442 ||||||||||||||||||||| Sbjct: 588 ggagatatggtgtttataaaa 608
>gb|AC174163.2| Gallus gallus BAC clone CH261-69O1 from chromosome ul, complete sequence Length = 178322 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 583 ggcatataataacaagaagta 603 ||||||||||||||||||||| Sbjct: 105034 ggcatataataacaagaagta 105054
>gb|AC164878.2| Mus musculus BAC clone RP23-364G24 from chromosome 13, complete sequence Length = 181893 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 391 ctggatgatgcaaaatcttc 410 |||||||||||||||||||| Sbjct: 32832 ctggatgatgcaaaatcttc 32851
>ref|XM_961971.1| PREDICTED: Tribolium castaneum similar to CG11856-PA (LOC655426), mRNA Length = 8340 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 tggatgatgcaaaatcttcttttg 415 ||||||||||||||||||| |||| Sbjct: 7515 tggatgatgcaaaatcttcatttg 7492
>dbj|AP008986.1| Xanthomonas oryzae phage OP2 DNA, complete genome Length = 46643 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 tcggcacttgatcgtcttgc 273 |||||||||||||||||||| Sbjct: 1433 tcggcacttgatcgtcttgc 1414
>gb|DQ381420.1| Escherichia coli plasmid pAPEC-O1-ColBM, complete sequence Length = 174241 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 551 tcttgtctaaccactggtga 570 |||||||||||||||||||| Sbjct: 166353 tcttgtctaaccactggtga 166372
>gb|AC103602.12| Mus musculus chromosome 1, clone RP24-234P21, complete sequence Length = 158510 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ttgaatctggtgacaaaatt 241 |||||||||||||||||||| Sbjct: 23291 ttgaatctggtgacaaaatt 23272
>gb|AC055716.24|AC055716 Homo sapiens 12 BAC RP11-641A6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 110819 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 351 tagagttcattgcagaagaaggca 374 ||||| |||||||||||||||||| Sbjct: 8585 tagagatcattgcagaagaaggca 8608
>gb|AC153876.8| Mus musculus 10 BAC RP23-218D7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 217077 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 tatcctatgctatttgaagt 309 |||||||||||||||||||| Sbjct: 143626 tatcctatgctatttgaagt 143607
>gb|AC016906.7| Homo sapiens BAC clone RP11-436E24 from 2, complete sequence Length = 183045 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 427 tatggtgtttataaaaaatg 446 |||||||||||||||||||| Sbjct: 118162 tatggtgtttataaaaaatg 118181
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 tgcaagaaggagatatggtg 433 |||||||||||||||||||| Sbjct: 2689266 tgcaagaaggagatatggtg 2689247
>emb|AL161665.5|CNS01RH9 Human chromosome 14 DNA sequence BAC R-431H16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 172993 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ccttcctgtccatgaatatg 136 |||||||||||||||||||| Sbjct: 124502 ccttcctgtccatgaatatg 124483
>gb|BC088804.1| Xenopus laevis hypothetical LOC496295, mRNA (cDNA clone MGC:98955 IMAGE:4684289), complete cds Length = 3026 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 cactggtgacagcattatgg 581 |||||||||||||||||||| Sbjct: 2229 cactggtgacagcattatgg 2248
>gb|AC004392.1|F8K4 Arabidopsis thaliana chromosome 1 BAC F8K4 sequence, complete sequence Length = 115641 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 atatggtgtttataaaaaat 445 |||||||||||||||||||| Sbjct: 15538 atatggtgtttataaaaaat 15557
>dbj|AP006638.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT47I16, TM0208c, complete sequence Length = 48081 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 gcacttgatcgtcttgcgtc 276 |||||||||||||||||||| Sbjct: 24689 gcacttgatcgtcttgcgtc 24708
>gb|AC169673.3| Mus musculus chromosome 1, clone RP24-188K18, complete sequence Length = 166442 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ttgaatctggtgacaaaatt 241 |||||||||||||||||||| Sbjct: 130555 ttgaatctggtgacaaaatt 130536
>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence Length = 188745 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 aatatgtattttgaaggcta 150 |||||||||||||||||||| Sbjct: 96301 aatatgtattttgaaggcta 96282
>emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, complete sequence Length = 147111 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 aatatgtattttgaaggcta 150 |||||||||||||||||||| Sbjct: 90267 aatatgtattttgaaggcta 90248
>gb|AC130472.2| Homo sapiens chromosome 3 clone RP11-395P16, complete sequence Length = 194160 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 gatgatgcaaaatcttcttt 413 |||||||||||||||||||| Sbjct: 108070 gatgatgcaaaatcttcttt 108051 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,698,028 Number of Sequences: 3902068 Number of extensions: 5698028 Number of successful extensions: 91722 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91416 Number of HSP's gapped (non-prelim): 302 length of query: 618 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 595 effective length of database: 17,143,297,704 effective search space: 10200262133880 effective search space used: 10200262133880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
