| Clone Name | baal29d19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arab... | 39 | 0.003 | 2 | PPF1_PEA (Q9FY06) Inner membrane protein PPF-1, chloroplast prec... | 35 | 0.074 | 3 | ALB3_ARATH (Q8LBP4) Inner membrane protein ALBINO3, chloroplast ... | 30 | 2.4 |
|---|
>ARTE_ARATH (Q9FYL3) Protein ARTEMIS, chloroplast precursor (Arabidopsis| thaliana envelope membrane integrase) (Ath4) (ALBINO3-like protein 1) Length = 1013 Score = 39.3 bits (90), Expect = 0.003 Identities = 16/22 (72%), Positives = 20/22 (90%) Frame = +2 Query: 2 VLSSAQQVWXQKLGGAKNPVQE 67 +LS+AQQVW QK GGAKNPV++ Sbjct: 843 ILSTAQQVWLQKYGGAKNPVEK 864
>PPF1_PEA (Q9FY06) Inner membrane protein PPF-1, chloroplast precursor| (Post-floral-specific protein 1) Length = 442 Score = 34.7 bits (78), Expect = 0.074 Identities = 16/22 (72%), Positives = 18/22 (81%) Frame = +2 Query: 2 VLSSAQQVWXQKLGGAKNPVQE 67 VLS+AQQVW +KLGGAK V E Sbjct: 321 VLSTAQQVWLRKLGGAKPAVNE 342
>ALB3_ARATH (Q8LBP4) Inner membrane protein ALBINO3, chloroplast precursor| Length = 462 Score = 29.6 bits (65), Expect = 2.4 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +2 Query: 2 VLSSAQQVWXQKLGGAKNPVQE 67 VLS+AQQV+ +KLGGAK + E Sbjct: 343 VLSTAQQVYLRKLGGAKPNMDE 364 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,276,607 Number of Sequences: 219361 Number of extensions: 206029 Number of successful extensions: 415 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 402 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 415 length of database: 80,573,946 effective HSP length: 25 effective length of database: 75,089,921 effective search space used: 1802158104 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)