| Clone Name | baal28n14 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 157 bits (79), Expect = 5e-35 Identities = 118/131 (90%) Strand = Plus / Plus Query: 468 gatttctggaaagaagctcagatcctgagctcgcttcatcatccaaatgtagtttcattc 527 ||||||||||||||||||||||| || || || ||||||||||||||||| |||||||| Sbjct: 33408876 gatttctggaaagaagctcagattctaagttcacttcatcatccaaatgtggtttcattt 33408935 Query: 528 tatggtgttgttcgtgatggtcctgatggaagcttagcgactgttaccgagtttatggtc 587 |||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| || Sbjct: 33408936 tatggtgtagttcgtgacggtcctgatggaagcttagcaactgttactgagtttatgatc 33408995 Query: 588 aacgggtctct 598 || || ||||| Sbjct: 33408996 aatggatctct 33409006 Score = 119 bits (60), Expect = 1e-23 Identities = 129/152 (84%) Strand = Plus / Plus Query: 306 cagactataaaaaatgatgatctggaggaaatcaaagagcttggttcgggtacttatggg 365 |||||||||||||||||||| |||||||||| | ||||| ||||| ||||||||||| Sbjct: 33408548 cagactataaaaaatgatgacttggaggaaattagggagctaggttcaggtacttatggt 33408607 Query: 366 tcagtctttcatggtaaatggaggggatgtgatgttgccatcaaaagaataaaagctagt 425 |||| | |||||||||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct: 33408608 gcagtttaccatggtaaatggagaggatgtgatgttgctattaaaaggataaaggctagc 33408667 Query: 426 tgctttgacggaaggccatctgagagagagcg 457 || |||| || || ||||||||||||||||| Sbjct: 33408668 tgttttgctggcagaccatctgagagagagcg 33408699 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 196 agaatactgatggagatcaggaccctgatgtgcacggaagctgcgaccagcacaaaagtt 255 ||||||||| | ||||||||| |||||||||| ||||| | || ||||| ||||||| Sbjct: 33408354 agaatactggtacagatcaggattctgatgtgcatggaagtggtgagcagcagaaaagtt 33408413 Query: 256 ctgggatcgaatctacacccgctgaagctgaagctttgtctaaaggattacag 308 |||| || || ||||| |||||||||| |||||||| || |||||| ||||| Sbjct: 33408414 ctggaattgaggctacaaccgctgaagcagaagctttatcaaaaggactacag 33408466 Score = 48.1 bits (24), Expect = 0.033 Identities = 78/96 (81%) Strand = Plus / Plus Query: 17 agcattgcagcagtgtggggatatatcggagaacagattaaatttccttccggagtttgt 76 |||| ||||| | ||||||||||| || ||| | ||||| ||||||||||| ||| | | Sbjct: 33408087 agcactgcaggaatgtggggatatttcagaggatagattgaatttccttccagagctggc 33408146 Query: 77 tgcctctgttaaaaaggccgcactggaagagtctga 112 ||| |||||||| ||||| ||| | ||||| ||||| Sbjct: 33408147 tgcatctgttaagaaggctgcattagaagattctga 33408182
>dbj|AP004057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1316_E06 Length = 110197 Score = 157 bits (79), Expect = 5e-35 Identities = 118/131 (90%) Strand = Plus / Plus Query: 468 gatttctggaaagaagctcagatcctgagctcgcttcatcatccaaatgtagtttcattc 527 ||||||||||||||||||||||| || || || ||||||||||||||||| |||||||| Sbjct: 39495 gatttctggaaagaagctcagattctaagttcacttcatcatccaaatgtggtttcattt 39554 Query: 528 tatggtgttgttcgtgatggtcctgatggaagcttagcgactgttaccgagtttatggtc 587 |||||||| |||||||| |||||||||||||||||||| |||||||| ||||||||| || Sbjct: 39555 tatggtgtagttcgtgacggtcctgatggaagcttagcaactgttactgagtttatgatc 39614 Query: 588 aacgggtctct 598 || || ||||| Sbjct: 39615 aatggatctct 39625 Score = 119 bits (60), Expect = 1e-23 Identities = 129/152 (84%) Strand = Plus / Plus Query: 306 cagactataaaaaatgatgatctggaggaaatcaaagagcttggttcgggtacttatggg 365 |||||||||||||||||||| |||||||||| | ||||| ||||| ||||||||||| Sbjct: 39167 cagactataaaaaatgatgacttggaggaaattagggagctaggttcaggtacttatggt 39226 Query: 366 tcagtctttcatggtaaatggaggggatgtgatgttgccatcaaaagaataaaagctagt 425 |||| | |||||||||||||| |||||||||||||| || ||||| ||||| ||||| Sbjct: 39227 gcagtttaccatggtaaatggagaggatgtgatgttgctattaaaaggataaaggctagc 39286 Query: 426 tgctttgacggaaggccatctgagagagagcg 457 || |||| || || ||||||||||||||||| Sbjct: 39287 tgttttgctggcagaccatctgagagagagcg 39318 Score = 65.9 bits (33), Expect = 1e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 196 agaatactgatggagatcaggaccctgatgtgcacggaagctgcgaccagcacaaaagtt 255 ||||||||| | ||||||||| |||||||||| ||||| | || ||||| ||||||| Sbjct: 38973 agaatactggtacagatcaggattctgatgtgcatggaagtggtgagcagcagaaaagtt 39032 Query: 256 ctgggatcgaatctacacccgctgaagctgaagctttgtctaaaggattacag 308 |||| || || ||||| |||||||||| |||||||| || |||||| ||||| Sbjct: 39033 ctggaattgaggctacaaccgctgaagcagaagctttatcaaaaggactacag 39085 Score = 48.1 bits (24), Expect = 0.033 Identities = 78/96 (81%) Strand = Plus / Plus Query: 17 agcattgcagcagtgtggggatatatcggagaacagattaaatttccttccggagtttgt 76 |||| ||||| | ||||||||||| || ||| | ||||| ||||||||||| ||| | | Sbjct: 38706 agcactgcaggaatgtggggatatttcagaggatagattgaatttccttccagagctggc 38765 Query: 77 tgcctctgttaaaaaggccgcactggaagagtctga 112 ||| |||||||| ||||| ||| | ||||| ||||| Sbjct: 38766 tgcatctgttaagaaggctgcattagaagattctga 38801
>ref|XM_468164.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2888 Score = 149 bits (75), Expect = 1e-32 Identities = 165/195 (84%) Strand = Plus / Plus Query: 209 agatcaggaccctgatgtgcacggaagctgcgaccagcacaaaagttctgggatcgaatc 268 ||||||||| |||||||||| ||||| | || ||||| ||||||||||| || || | Sbjct: 1992 agatcaggattctgatgtgcatggaagtggtgagcagcagaaaagttctggaattgaggc 2051 Query: 269 tacacccgctgaagctgaagctttgtctaaaggattacagactataaaaaatgatgatct 328 |||| |||||||||| |||||||| || |||||| |||||||||||||||||||||| | Sbjct: 2052 tacaaccgctgaagcagaagctttatcaaaaggactacagactataaaaaatgatgactt 2111 Query: 329 ggaggaaatcaaagagcttggttcgggtacttatgggtcagtctttcatggtaaatggag 388 ||||||||| | ||||| ||||| ||||||||||| |||| | |||||||||||||| Sbjct: 2112 ggaggaaattagggagctaggttcaggtacttatggtgcagtttaccatggtaaatggag 2171 Query: 389 gggatgtgatgttgc 403 |||||||||||||| Sbjct: 2172 aggatgtgatgttgc 2186 Score = 48.1 bits (24), Expect = 0.033 Identities = 78/96 (81%) Strand = Plus / Plus Query: 17 agcattgcagcagtgtggggatatatcggagaacagattaaatttccttccggagtttgt 76 |||| ||||| | ||||||||||| || ||| | ||||| ||||||||||| ||| | | Sbjct: 1788 agcactgcaggaatgtggggatatttcagaggatagattgaatttccttccagagctggc 1847 Query: 77 tgcctctgttaaaaaggccgcactggaagagtctga 112 ||| |||||||| ||||| ||| | ||||| ||||| Sbjct: 1848 tgcatctgttaagaaggctgcattagaagattctga 1883
>dbj|AK067937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122E21, full insert sequence Length = 2888 Score = 149 bits (75), Expect = 1e-32 Identities = 165/195 (84%) Strand = Plus / Plus Query: 209 agatcaggaccctgatgtgcacggaagctgcgaccagcacaaaagttctgggatcgaatc 268 ||||||||| |||||||||| ||||| | || ||||| ||||||||||| || || | Sbjct: 1992 agatcaggattctgatgtgcatggaagtggtgagcagcagaaaagttctggaattgaggc 2051 Query: 269 tacacccgctgaagctgaagctttgtctaaaggattacagactataaaaaatgatgatct 328 |||| |||||||||| |||||||| || |||||| |||||||||||||||||||||| | Sbjct: 2052 tacaaccgctgaagcagaagctttatcaaaaggactacagactataaaaaatgatgactt 2111 Query: 329 ggaggaaatcaaagagcttggttcgggtacttatgggtcagtctttcatggtaaatggag 388 ||||||||| | ||||| ||||| ||||||||||| |||| | |||||||||||||| Sbjct: 2112 ggaggaaattagggagctaggttcaggtacttatggtgcagtttaccatggtaaatggag 2171 Query: 389 gggatgtgatgttgc 403 |||||||||||||| Sbjct: 2172 aggatgtgatgttgc 2186 Score = 48.1 bits (24), Expect = 0.033 Identities = 78/96 (81%) Strand = Plus / Plus Query: 17 agcattgcagcagtgtggggatatatcggagaacagattaaatttccttccggagtttgt 76 |||| ||||| | ||||||||||| || ||| | ||||| ||||||||||| ||| | | Sbjct: 1788 agcactgcaggaatgtggggatatttcagaggatagattgaatttccttccagagctggc 1847 Query: 77 tgcctctgttaaaaaggccgcactggaagagtctga 112 ||| |||||||| ||||| ||| | ||||| ||||| Sbjct: 1848 tgcatctgttaagaaggctgcattagaagattctga 1883
>ref|NM_125142.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT5G57610 mRNA, complete cds Length = 3413 Score = 60.0 bits (30), Expect = 9e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 459 ttgatagcggatttctggaaagaagctcagatcctgagctcgcttcatcatccaaatgta 518 ||||||| ||||| ||||||||||| | | | ||||||| | |||||||||||||| Sbjct: 2473 ttgatagaagatttttggaaagaagccctgttattgagctcattgcatcatccaaatgtt 2532 Query: 519 gtttcattctatggtgttgttcgtgatggtcctgatgg 556 || || |||||||| | |||||||||||||||||||| Sbjct: 2533 gtgtcgttctatgggatagttcgtgatggtcctgatgg 2570
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 374 tcatggtaaatggaggggatgtgatgttgccatcaaaagaat 415 |||||||||||||||||||| ||||||||| || |||||||| Sbjct: 26018766 tcatggtaaatggaggggatctgatgttgctattaaaagaat 26018807
>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1226_A12 Length = 113025 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 374 tcatggtaaatggaggggatgtgatgttgccatcaaaagaat 415 |||||||||||||||||||| ||||||||| || |||||||| Sbjct: 56624 tcatggtaaatggaggggatctgatgttgctattaaaagaat 56665
>ref|NM_101493.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase AT1G16270 mRNA, complete cds Length = 3667 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 374 tcatggtaaatggaggggatgtgatgttgccatcaaaagaataaa 418 ||||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 2634 tcatggtaaatggagaggatcagatgttgccatcaaaaggataaa 2678 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 500 gcttcatcatccaaatgtagtttcattctatggtgttgt 538 |||||||||||||||||| ||| |||| ||||||||||| Sbjct: 2760 gcttcatcatccaaatgtggttgcattttatggtgttgt 2798
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 504 catcatccaaatgtagtttcattctatggtgttgttcgtgatggtcctgatgg 556 |||||||||||||| || || |||||||| | |||||||||||||||||||| Sbjct: 59046 catcatccaaatgttgtgtcgttctatgggatagttcgtgatggtcctgatgg 59098
>gb|AC006341.2|F3O9 Arabidopsis thaliana chromosome 1 BAC F3O9 sequence, complete sequence Length = 114498 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 374 tcatggtaaatggaggggatgtgatgttgccatcaaaagaataaa 418 ||||||||||||||| |||| ||||||||||||||||| ||||| Sbjct: 21784 tcatggtaaatggagaggatcagatgttgccatcaaaaggataaa 21828 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 500 gcttcatcatccaaatgtagtttcattctatggtgttgt 538 |||||||||||||||||| ||| |||| ||||||||||| Sbjct: 22035 gcttcatcatccaaatgtggttgcattttatggtgttgt 22073
>gb|AY108770.1| Zea mays PCO069828 mRNA sequence Length = 1493 Score = 48.1 bits (24), Expect = 0.033 Identities = 63/76 (82%) Strand = Plus / Plus Query: 340 aagagcttggttcgggtacttatgggtcagtctttcatggtaaatggaggggatgtgatg 399 ||||||||||||| || |||| ||| | |||| ||||||||||||||| || ||||| Sbjct: 57 aagagcttggttctggaacttttggaactgtctatcatggtaaatggagaggcactgatg 116 Query: 400 ttgccatcaaaagaat 415 |||| || |||||||| Sbjct: 117 ttgcaataaaaagaat 132
>gb|AY738149.1| Zea mays salt-inducible protein kinase mRNA, complete cds Length = 972 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 500 gcttcatcatccaaatgtagtttcattctatggtgttgt 538 |||||||||||||||||| || |||| ||||||||||| Sbjct: 309 gcttcatcatccaaatgttgtggcattttatggtgttgt 347 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 375 catggtaaatggaggggatgtgatgttgccatcaaaagaataaa 418 ||||| ||||||||||| ||||||| ||||| || |||||||| Sbjct: 184 catggaaaatggaggggcagtgatgtagccattaagagaataaa 227
>emb|BX470173.6| Human DNA sequence from clone RP11-739C15 on chromosome 1, complete sequence Length = 66303 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 105 gagtctgagaagccagtagaggttcag 131 ||||||||||||||||| ||||||||| Sbjct: 29151 gagtctgagaagccagtggaggttcag 29125
>emb|BX470124.2| Human DNA sequence from clone XX-86143B6 on chromosome 1, complete sequence Length = 23128 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 105 gagtctgagaagccagtagaggttcag 131 ||||||||||||||||| ||||||||| Sbjct: 3914 gagtctgagaagccagtggaggttcag 3888
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 374 tcatggtaaatggaggggatgtgatgttgccatcaaaagaataaa 418 |||||| |||||||||||| ||||||| || || || |||||||| Sbjct: 14675525 tcatggaaaatggaggggaagtgatgtggctattaagagaataaa 14675569
>dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0443H10 Length = 144695 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 374 tcatggtaaatggaggggatgtgatgttgccatcaaaagaataaa 418 |||||| |||||||||||| ||||||| || || || |||||||| Sbjct: 292 tcatggaaaatggaggggaagtgatgtggctattaagagaataaa 336
>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0026I22 Length = 143302 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 374 tcatggtaaatggaggggatgtgatgttgccatcaaaagaataaa 418 |||||| |||||||||||| ||||||| || || || |||||||| Sbjct: 68523 tcatggaaaatggaggggaagtgatgtggctattaagagaataaa 68567
>gb|DQ154910.1| Triticum aestivum B genome RAB7 (RAB7) and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) genes, partial sequence Length = 1900 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 527 ctatggtgttgttcgtgatgg 547 ||||||||||||||||||||| Sbjct: 1135 ctatggtgttgttcgtgatgg 1115
>gb|AC153729.1| Mus musculus BAC RP23-88C11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250801 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gaagccagtagaggttcagc 132 |||||||||||||||||||| Sbjct: 216084 gaagccagtagaggttcagc 216103
>gb|AC105324.11| Mus musculus chromosome 15, clone RP24-311E18, complete sequence Length = 171004 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 gagtctgagaagccagtaga 124 |||||||||||||||||||| Sbjct: 38151 gagtctgagaagccagtaga 38132
>gb|AC115035.5| Mus musculus chromosome 3, clone RP24-273F11, complete sequence Length = 131719 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 310 ctataaaaaatgatgatctggaggaaat 337 ||||| |||||||||| ||||||||||| Sbjct: 46473 ctatagaaaatgatgagctggaggaaat 46500
>gb|AC182395.3| Pan troglodytes BAC clone CH251-484N21 from chromosome 2, complete sequence Length = 176398 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 aaagatggaaagaagtttga 193 |||||||||||||||||||| Sbjct: 151515 aaagatggaaagaagtttga 151496
>gb|AC131336.9| Mus musculus chromosome 1, clone RP23-96A20, complete sequence Length = 121355 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 471 ttctggaaagaagctcagat 490 |||||||||||||||||||| Sbjct: 86009 ttctggaaagaagctcagat 86028
>gb|AC162790.2| Mus musculus chromosome 3, clone RP24-397C18, complete sequence Length = 169244 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 310 ctataaaaaatgatgatctggaggaaat 337 ||||| |||||||||| ||||||||||| Sbjct: 58128 ctatagaaaatgatgagctggaggaaat 58101
>ref|XM_542503.2| PREDICTED: Canis familiaris similar to SWA-70 protein (LOC485385), mRNA Length = 2001 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 tgacaaagatggaaagaagt 189 |||||||||||||||||||| Sbjct: 1041 tgacaaagatggaaagaagt 1060
>gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete sequence Length = 127696 Score = 40.1 bits (20), Expect = 8.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 374 tcatggtaaatggaggggatgtgatgttgccatcaa 409 |||||| |||||||||||| ||||||||| ||||| Sbjct: 116641 tcatggaaaatggaggggaactgatgttgcaatcaa 116676
>emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chromosome 6 Contains a novel gene, complete sequence Length = 183342 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 ctgttaaaaaggccgcactggaag 105 |||||||||||||| ||||||||| Sbjct: 142641 ctgttaaaaaggcctcactggaag 142618
>emb|AL353625.5| Human DNA sequence from clone RP11-288H12 on chromosome 6 Contains the 3' end of the IGF2R gene for insulin-like growth factor 2 receptor (cation-independent mannose-6 phosphate receptor, Insulin-like growth factor-2 receptor (mannose-6-phosphate receptor, cation-independent))(MPRI, CD222, CIMPR, M6P-R), the SLC22A1 gene for solute carrier family 22 (organic cation transporter), member 1 (OCT1), a calcium binding protein P22 (calcineurin B homolog, SLC9A1 binding protein, calcineurin homologous protein) (CHP) (SLC9A1BP) pseudogene and two CpG islands, complete sequence Length = 148250 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 tggaaagaagctcagatcct 493 |||||||||||||||||||| Sbjct: 129896 tggaaagaagctcagatcct 129877
>emb|AL035416.7|HS782L23 Human DNA sequence from clone RP4-782L23 on chromosome 1p31.2-33 Contains the 3' end of a novel gene (FLJ10986), two novel genes, the 5' end of the HOOK1 gene for hook homolog 1 (Drosophila) and a CpG island, complete sequence Length = 123925 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ggagaacagattaaatttcc 63 |||||||||||||||||||| Sbjct: 23703 ggagaacagattaaatttcc 23722
>emb|AL031772.6|HS225E12 Human DNA sequence from clone RP1-225E12 on chromosome 6q24 Contains the gene for hHDC for homolog of Drosophila headcase (LOC51696) and part of a novel gene, complete sequence Length = 126464 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 atccaaatgtagtttcattctatg 531 ||||||||||||| |||||||||| Sbjct: 7670 atccaaatgtagtatcattctatg 7647
>emb|Z95397.2|SPBC25H2 S.pombe chromosome II cosmid c25H2 Length = 38585 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaatgatgatctggaggaaa 336 |||||||||||||||||||| Sbjct: 13498 aaatgatgatctggaggaaa 13517
>emb|BX901878.6| Zebrafish DNA sequence from clone DKEY-11O15 in linkage group 21, complete sequence Length = 217310 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttacagactataaaaaatga 322 |||||||||||||||||||| Sbjct: 209876 ttacagactataaaaaatga 209857
>gb|AC116105.12| Mus musculus chromosome 1, clone RP23-23A4, complete sequence Length = 214780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ttctggaaagaagctcagat 490 |||||||||||||||||||| Sbjct: 198542 ttctggaaagaagctcagat 198523
>gb|AC122175.9| Pan troglodytes clone rp43-99g12, complete sequence Length = 196097 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 aaagatggaaagaagtttga 193 |||||||||||||||||||| Sbjct: 128168 aaagatggaaagaagtttga 128149
>gb|AC120781.23| Pan troglodytes clone rp43-28m17, complete sequence Length = 184706 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 aaagatggaaagaagtttga 193 |||||||||||||||||||| Sbjct: 119354 aaagatggaaagaagtttga 119373
>gb|AC113175.2| Homo sapiens chromosome 1 clone RP4-781A20, complete sequence Length = 127627 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 ggagaacagattaaatttcc 63 |||||||||||||||||||| Sbjct: 10424 ggagaacagattaaatttcc 10405
>gb|AC027141.7| Homo sapiens chromosome 18, clone RP11-29E21, complete sequence Length = 146286 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 atgacaaagatggaaagaag 188 |||||||||||||||||||| Sbjct: 113330 atgacaaagatggaaagaag 113311
>gb|AC100794.2| Homo sapiens chromosome 18, clone CTD-2559F21, complete sequence Length = 143575 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 atgacaaagatggaaagaag 188 |||||||||||||||||||| Sbjct: 22750 atgacaaagatggaaagaag 22731
>gb|AC092372.3| Homo sapiens chromosome 5 clone RP11-58M12, complete sequence Length = 101220 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 cttatgggtcagtctttcat 377 |||||||||||||||||||| Sbjct: 89200 cttatgggtcagtctttcat 89219
>gb|AC022121.6| Homo sapiens chromosome 5 clone CTD-2007H13, complete sequence Length = 219258 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 cttatgggtcagtctttcat 377 |||||||||||||||||||| Sbjct: 151713 cttatgggtcagtctttcat 151732
>ref|NM_001022274.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC25H2.13c), partial mRNA Length = 6600 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaatgatgatctggaggaaa 336 |||||||||||||||||||| Sbjct: 5202 aaatgatgatctggaggaaa 5221
>gb|AC012624.6| Homo sapiens chromosome 5 clone CTD-2082I17, complete sequence Length = 134365 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 cttatgggtcagtctttcat 377 |||||||||||||||||||| Sbjct: 55989 cttatgggtcagtctttcat 55970
>gb|AC026778.4|AC026778 Homo sapiens chromosome 5 clone CTC-428I11, complete sequence Length = 195433 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 cttatgggtcagtctttcat 377 |||||||||||||||||||| Sbjct: 91986 cttatgggtcagtctttcat 92005
>gb|AF260580.1|AF260579S2 Mus musculus disabled-2 p96 (Dab2) gene, exons 2 through 15, and complete cds Length = 29517 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gagtctgagaagccagtaga 124 |||||||||||||||||||| Sbjct: 20578 gagtctgagaagccagtaga 20597
>gb|AC158598.7| Mus musculus 10 BAC RP24-286B23 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162273 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aaatgatgatctggaggaaa 336 |||||||||||||||||||| Sbjct: 89575 aaatgatgatctggaggaaa 89594
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 504 catcatccaaatgtagtttcattctatggtgttgttcgtgatgg 547 |||||||||||||| ||| | |||||||| || |||| |||||| Sbjct: 24982720 catcatccaaatgttgttgctttctatggggtggttcctgatgg 24982763
>gb|AC073869.5| Homo sapiens BAC clone RP11-109E12 from 2, complete sequence Length = 195280 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 aaagatggaaagaagtttga 193 |||||||||||||||||||| Sbjct: 4902 aaagatggaaagaagtttga 4883
>emb|BX276187.8| Zebrafish DNA sequence from clone DKEY-207F13 in linkage group 8, complete sequence Length = 159887 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 436 gaaggccatctgagagagag 455 |||||||||||||||||||| Sbjct: 87432 gaaggccatctgagagagag 87413
>emb|AL954329.7| Zebrafish DNA sequence from clone CH211-226C11 in linkage group 23, complete sequence Length = 194284 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 ttgccatcaaaagaataaaa 419 |||||||||||||||||||| Sbjct: 129468 ttgccatcaaaagaataaaa 129487
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 504 catcatccaaatgtagtttcattctatggtgttgttcgtgatgg 547 |||||||||||||| ||| | |||||||| || |||| |||||| Sbjct: 24910926 catcatccaaatgttgttgctttctatggggtggttcctgatgg 24910969
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 40.1 bits (20), Expect = 8.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 504 catcatccaaatgtagtttcattctatggtgttgttcgtgatgg 547 |||||||||||||| ||| | |||||||| || |||| |||||| Sbjct: 124447 catcatccaaatgttgttgctttctatggggtggttcctgatgg 124404 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,827,640 Number of Sequences: 3902068 Number of extensions: 5827640 Number of successful extensions: 130380 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 130124 Number of HSP's gapped (non-prelim): 255 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)