ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal29b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK108690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
2dbj|AK062903.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
3dbj|AK111355.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 1e-47
4gb|AY111250.1| Zea mays CL14815_1 mRNA sequence 141 3e-30
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 139 1e-29
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 139 1e-29
7emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa... 139 1e-29
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
9dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
10dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic D... 131 2e-27
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.8
12gb|AC098973.2| Homo sapiens chromosome 3 clone RP11-286D1, compl... 42 1.8
13gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
15dbj|AK100694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
16dbj|AK066392.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
17dbj|AP000722.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.8
18gb|AC116788.14| Mus musculus chromosome 8, clone RP24-296N13, co... 40 7.0
19gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
20gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence 40 7.0
21gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
22gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, comp... 40 7.0
23emb|AL513044.13| Human DNA sequence from clone RP11-187D4 on chr... 40 7.0
24emb|AL445486.10| Human DNA sequence from clone RP11-139K1 on chr... 40 7.0
25ref|XM_504385.1| Yarrowia lipolytica CLIB122, YALI0E25201g predi... 40 7.0
26gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 7.0
27gb|AC096629.11| Bos taurus clone rp42-152a4, complete sequence 40 7.0
28gb|AC092858.21| Bos taurus clone rp42-147e22, complete sequence 40 7.0
29gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Can... 40 7.0
30gb|BC109580.1| Bos taurus cDNA clone MGC:133945 IMAGE:8056717, c... 40 7.0
31gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosom... 40 7.0
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
33gb|AC092874.2| Sus scrofa clone RP44-326F1, complete sequence 40 7.0
34gb|AY621506.1| Aptostichus sp. APT2 cytochrome oxidase subunit I... 40 7.0
35dbj|AK109079.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
36gb|DQ338750.1| Thaumantis klugius cytochrome c oxidase subunit I... 40 7.0
37gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster... 40 7.0
38emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB ... 40 7.0
39dbj|AB231866.1| Branchiostoma floridae gene for zinc finger prot... 40 7.0 
>dbj|AK108690.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D03, full
           insert sequence
          Length = 1299

 Score =  220 bits (111), Expect = 3e-54
 Identities = 156/171 (91%)
 Strand = Plus / Plus

                                                                       
Query: 72  cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 131
           |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 211 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 270

                                                                       
Query: 132 cggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagattatgt 191
           ||| || ||||||||||||||||||||||||||||||||| | || || ||||||||  |
Sbjct: 271 cggcgtcccctggtacctcatgacccgaggggcaaagcatcagtcgcaccaagattacat 330

                                                              
Query: 192 ggagcgagctaacaaggcgaggtcggataggctttcttctggacagccatc 242
           |||  |||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 331 ggaaagagctaacaaggcgaggtcggagaggctttcttctggacaggcatc 381
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>dbj|AK062903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F07, full
           insert sequence
          Length = 640

 Score =  220 bits (111), Expect = 3e-54
 Identities = 156/171 (91%)
 Strand = Plus / Plus

                                                                       
Query: 72  cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 131
           |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 176 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 235

                                                                       
Query: 132 cggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagattatgt 191
           ||| || ||||||||||||||||||||||||||||||||| | || || ||||||||  |
Sbjct: 236 cggcgtcccctggtacctcatgacccgaggggcaaagcatcagtcgcaccaagattacat 295

                                                              
Query: 192 ggagcgagctaacaaggcgaggtcggataggctttcttctggacagccatc 242
           |||  |||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 296 ggaaagagctaacaaggcgaggtcggagaggctttcttctggacaggcatc 346
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>dbj|AK111355.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-G12, full
           insert sequence
          Length = 521

 Score =  198 bits (100), Expect = 1e-47
 Identities = 154/172 (89%)
 Strand = Plus / Plus

                                                                       
Query: 72  cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 131
           |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 57  cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 116

                                                                       
Query: 132 cggggttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagattatgt 191
           ||| |||||||||||| |||||| ||||||| |||||||| | ||||| ||||||||  |
Sbjct: 117 cggcgttccctggtacttcatgagccgagggacaaagcatcaatctcaccaagattacat 176

                                                               
Query: 192 ggagcgagctaacaaggcgaggtcggataggctttcttctggacagccatca 243
           |||   ||||||||||||||||||||| || ||||||||||||||| |||||
Sbjct: 177 ggaaaaagctaacaaggcgaggtcggagagactttcttctggacagtcatca 228
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>gb|AY111250.1| Zea mays CL14815_1 mRNA sequence
          Length = 431

 Score =  141 bits (71), Expect = 3e-30
 Identities = 143/167 (85%)
 Strand = Plus / Minus

                                                                       
Query: 76  tacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccattttcggg 135
           ||||| || |||||||||||||||||||| ||||||||||||||||| ||| | ||||| 
Sbjct: 325 tacagtggcgagaagaagcacgtcgtcgccggcatcgccatcttcgctgccgtcttcggc 266

                                                                       
Query: 136 gttccctggtacctcatgacccgaggggcaaagcatgactctcatcaagattatgtggag 195
           || || |||||| ||||||| ||||||||||||||| | ||||| ||||||||  |||| 
Sbjct: 265 gtcccatggtacttcatgacgcgaggggcaaagcatcaatctcaccaagattacatggaa 206

                                                          
Query: 196 cgagctaacaaggcgaggtcggataggctttcttctggacagccatc 242
              |||||||||||||| || || |||||||||||||||||| ||||
Sbjct: 205 aaggctaacaaggcgagatcagagaggctttcttctggacagtcatc 159
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Plus

                                                                            
Query: 72       cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 131
                |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 22675207 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 22675266

                                              
Query: 132      cggggttccctggtacctcatgacccgagg 161
                ||| || |||||||||||||||||||||||
Sbjct: 22675267 cggcgtcccctggtacctcatgacccgagg 22675296



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                            
Query: 159      aggggcaaagcatgactctcatcaagattatgtggagcgagctaacaaggcgaggtcgga 218
                ||||||||||||| | || || ||||||||  ||||  ||||||||||||||||||||||
Sbjct: 22676348 aggggcaaagcatcagtcgcaccaagattacatggaaagagctaacaaggcgaggtcgga 22676407

                                        
Query: 219      taggctttcttctggacagccatc 242
                 |||||||||||||||||| ||||
Sbjct: 22676408 gaggctttcttctggacaggcatc 22676431
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Plus

                                                                            
Query: 72       cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 131
                |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 22603398 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 22603457

                                              
Query: 132      cggggttccctggtacctcatgacccgagg 161
                ||| || |||||||||||||||||||||||
Sbjct: 22603458 cggcgtcccctggtacctcatgacccgagg 22603487



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                            
Query: 159      aggggcaaagcatgactctcatcaagattatgtggagcgagctaacaaggcgaggtcgga 218
                ||||||||||||| | || || ||||||||  ||||  ||||||||||||||||||||||
Sbjct: 22604539 aggggcaaagcatcagtcgcaccaagattacatggaaagagctaacaaggcgaggtcgga 22604598

                                        
Query: 219      taggctttcttctggacagccatc 242
                 |||||||||||||||||| ||||
Sbjct: 22604599 gaggctttcttctggacaggcatc 22604622
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>emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa0027H05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 138368

 Score =  139 bits (70), Expect = 1e-29
 Identities = 85/90 (94%)
 Strand = Plus / Plus

                                                                          
Query: 72     cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 131
              |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 120327 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 120386

                                            
Query: 132    cggggttccctggtacctcatgacccgagg 161
              ||| || |||||||||||||||||||||||
Sbjct: 120387 cggcgtcccctggtacctcatgacccgagg 120416



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 74/84 (88%)
 Strand = Plus / Plus

                                                                          
Query: 159    aggggcaaagcatgactctcatcaagattatgtggagcgagctaacaaggcgaggtcgga 218
              ||||||||||||| | || || ||||||||  ||||  ||||||||||||||||||||||
Sbjct: 121468 aggggcaaagcatcagtcgcaccaagattacatggaaagagctaacaaggcgaggtcgga 121527

                                      
Query: 219    taggctttcttctggacagccatc 242
               |||||||||||||||||| ||||
Sbjct: 121528 gaggctttcttctggacaggcatc 121551
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                            
Query: 72       cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 131
                |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 10440417 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 10440358

                                              
Query: 132      cggggttccctggtacctcatgacccgagg 161
                ||| |||||||||||| |||||| ||||||
Sbjct: 10440357 cggcgttccctggtacttcatgagccgagg 10440328



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                            
Query: 159      aggggcaaagcatgactctcatcaagattatgtggagcgagctaacaaggcgaggtcgga 218
                |||| |||||||| | ||||| ||||||||  ||||   |||||||||||||||||||||
Sbjct: 10438383 agggacaaagcatcaatctcaccaagattacatggaaaaagctaacaaggcgaggtcgga 10438324

                                         
Query: 219      taggctttcttctggacagccatca 243
                 || ||||||||||||||| |||||
Sbjct: 10438323 gagactttcttctggacagtcatca 10438299



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 1        gcggcggcggtgatgggaggcgag 24
                |||||||||| |||||||||||||
Sbjct: 10440488 gcggcggcggcgatgggaggcgag 10440465
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>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0091D16
          Length = 174222

 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                          
Query: 72     cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 131
              |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 141375 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 141316

                                            
Query: 132    cggggttccctggtacctcatgacccgagg 161
              ||| |||||||||||| |||||| ||||||
Sbjct: 141315 cggcgttccctggtacttcatgagccgagg 141286



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                          
Query: 159    aggggcaaagcatgactctcatcaagattatgtggagcgagctaacaaggcgaggtcgga 218
              |||| |||||||| | ||||| ||||||||  ||||   |||||||||||||||||||||
Sbjct: 139341 agggacaaagcatcaatctcaccaagattacatggaaaaagctaacaaggcgaggtcgga 139282

                                       
Query: 219    taggctttcttctggacagccatca 243
               || ||||||||||||||| |||||
Sbjct: 139281 gagactttcttctggacagtcatca 139257



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      gcggcggcggtgatgggaggcgag 24
              |||||||||| |||||||||||||
Sbjct: 141446 gcggcggcggcgatgggaggcgag 141423
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>dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0053M06
          Length = 175416

 Score =  131 bits (66), Expect = 2e-27
 Identities = 84/90 (93%)
 Strand = Plus / Minus

                                                                         
Query: 72    cctgtacagcggagagaagaagcacgtcgtcgcaggcatcgccatcttcgccgccatttt 131
             |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 63008 cctgtacagcggcgagaagaagcacgtcgtcgccggcatcgccatcttcgccgccatctt 62949

                                           
Query: 132   cggggttccctggtacctcatgacccgagg 161
             ||| |||||||||||| |||||| ||||||
Sbjct: 62948 cggcgttccctggtacttcatgagccgagg 62919



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                         
Query: 159   aggggcaaagcatgactctcatcaagattatgtggagcgagctaacaaggcgaggtcgga 218
             |||| |||||||| | ||||| ||||||||  ||||   |||||||||||||||||||||
Sbjct: 60974 agggacaaagcatcaatctcaccaagattacatggaaaaagctaacaaggcgaggtcgga 60915

                                      
Query: 219   taggctttcttctggacagccatca 243
              || ||||||||||||||| |||||
Sbjct: 60914 gagactttcttctggacagtcatca 60890



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 1     gcggcggcggtgatgggaggcgag 24
             |||||||||| |||||||||||||
Sbjct: 63079 gcggcggcggcgatgggaggcgag 63056
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 1       gcggcggcggtgatgggaggcgagg 25
               |||||||||| ||||||||||||||
Sbjct: 8736445 gcggcggcggcgatgggaggcgagg 8736469
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>gb|AC098973.2| Homo sapiens chromosome 3 clone RP11-286D1, complete sequence
          Length = 216172

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 220    aggctttcttctggacagcca 240
              |||||||||||||||||||||
Sbjct: 155930 aggctttcttctggacagcca 155910
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>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02,
             complete sequence
          Length = 115270

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1     gcggcggcggtgatgggaggcgagg 25
             |||||||||| ||||||||||||||
Sbjct: 80096 gcggcggcggcgatgggaggcgagg 80120
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 1       gcggcggcggtgatgggaggcgagg 25
               |||||||||| ||||||||||||||
Sbjct: 8734280 gcggcggcggcgatgggaggcgagg 8734304
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>dbj|AK100694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114I18, full
           insert sequence
          Length = 2924

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 1   gcggcggcggtgatgggaggcgagg 25
           |||||||||| ||||||||||||||
Sbjct: 692 gcggcggcggcgatgggaggcgagg 716
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>dbj|AK066392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065E20, full
           insert sequence
          Length = 2300

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 1   gcggcggcggtgatgggaggcgagg 25
           |||||||||| ||||||||||||||
Sbjct: 109 gcggcggcggcgatgggaggcgagg 133
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>dbj|AP000722.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-675M1, complete
              sequence
          Length = 177882

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 314    gaatctgaaggcttaatcttg 334
              |||||||||||||||||||||
Sbjct: 139046 gaatctgaaggcttaatcttg 139066
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>gb|AC116788.14| Mus musculus chromosome 8, clone RP24-296N13, complete sequence
          Length = 164158

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 394   ttattgtaatacagtaacagtaga 417
             ||||||||||||| ||||||||||
Sbjct: 92804 ttattgtaatacactaacagtaga 92781
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>gb|AC097176.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1576_F01,
             complete sequence
          Length = 119525

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   gacaacaaatcatgatattt 495
             ||||||||||||||||||||
Sbjct: 19796 gacaacaaatcatgatattt 19777
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>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence
          Length = 183990

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   tgtaatacagtaacagtaga 417
             ||||||||||||||||||||
Sbjct: 32068 tgtaatacagtaacagtaga 32087
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>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01,
             complete sequence
          Length = 126532

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   gacaacaaatcatgatattt 495
             ||||||||||||||||||||
Sbjct: 90524 gacaacaaatcatgatattt 90505
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>gb|AC131335.11| Mus musculus chromosome 8, clone RP23-32D9, complete sequence
          Length = 190133

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   taacagtagaaattttgttc 427
             ||||||||||||||||||||
Sbjct: 44574 taacagtagaaattttgttc 44555
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>emb|AL513044.13| Human DNA sequence from clone RP11-187D4 on chromosome 1 Contains a CpG
             island, complete sequence
          Length = 111901

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 461   taggaggagacgatggacaa 480
             ||||||||||||||||||||
Sbjct: 29628 taggaggagacgatggacaa 29609
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>emb|AL445486.10| Human DNA sequence from clone RP11-139K1 on chromosome 10 Contains
            part of the TCF7L2 gene for transcription factor 7-like 2
            (T-cell specific, HMG-box) and a ribosomal protein S15
            (RPS15) pseudogene, complete sequence
          Length = 101839

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  tctcatagtagtcttttttg 454
            ||||||||||||||||||||
Sbjct: 4999 tctcatagtagtcttttttg 5018
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>ref|XM_504385.1| Yarrowia lipolytica CLIB122, YALI0E25201g predicted mRNA
          Length = 4068

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 97  gtcgtcgcaggcatcgccatcttc 120
           ||||||||||||||| ||||||||
Sbjct: 736 gtcgtcgcaggcatcaccatcttc 759
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     agcacgtcgtcgcaggcatc 111
              ||||||||||||||||||||
Sbjct: 160285 agcacgtcgtcgcaggcatc 160304
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>gb|AC096629.11| Bos taurus clone rp42-152a4, complete sequence
          Length = 191756

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     ccaggatagatcacgtcctg 75
              ||||||||||||||||||||
Sbjct: 179476 ccaggatagatcacgtcctg 179457
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>gb|AC092858.21| Bos taurus clone rp42-147e22, complete sequence
          Length = 165590

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ccaggatagatcacgtcctg 75
             ||||||||||||||||||||
Sbjct: 22583 ccaggatagatcacgtcctg 22564
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>gb|AC068759.11| Homo sapiens 3 BAC RP11-324C10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183357

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   tcactgaaagaatgaaggag 260
             ||||||||||||||||||||
Sbjct: 29113 tcactgaaagaatgaaggag 29094
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>gb|BC109580.1| Bos taurus cDNA clone MGC:133945 IMAGE:8056717, complete cds
          Length = 1777

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 244 ctgaaagaatgaaggagctg 263
           ||||||||||||||||||||
Sbjct: 594 ctgaaagaatgaaggagctg 613
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>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence
          Length = 206310

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 408    taacagtagaaattttgttc 427
              ||||||||||||||||||||
Sbjct: 174215 taacagtagaaattttgttc 174196
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 476      gacaacaaatcatgatattt 495
                ||||||||||||||||||||
Sbjct: 21971310 gacaacaaatcatgatattt 21971291
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>gb|AC092874.2| Sus scrofa clone RP44-326F1, complete sequence
          Length = 164404

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   ttgtaatacagtaacagtag 416
             ||||||||||||||||||||
Sbjct: 50228 ttgtaatacagtaacagtag 50247
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>gb|AY621506.1| Aptostichus sp. APT2 cytochrome oxidase subunit I (COI) gene,
           partial cds; mitochondrial
          Length = 810

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 449 tttttgctattctaggagga 468
           ||||||||||||||||||||
Sbjct: 768 tttttgctattctaggagga 787
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>dbj|AK109079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-G11, full
           insert sequence
          Length = 1040

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 111 cgccatcttcgccgccattttcgg 134
           ||||||||||||||||||| ||||
Sbjct: 100 cgccatcttcgccgccattatcgg 123
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>gb|DQ338750.1| Thaumantis klugius cytochrome c oxidase subunit I (COI) gene, partial
            cds; mitochondrial
          Length = 1450

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 449  tttttgctattctaggagga 468
            ||||||||||||||||||||
Sbjct: 1085 tttttgctattctaggagga 1104
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>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome
          Length = 1267782

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   tcatagtagtcttttttgct 456
             ||||||||||||||||||||
Sbjct: 44360 tcatagtagtcttttttgct 44379
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>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica
          Length = 4224103

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 97      gtcgtcgcaggcatcgccatcttc 120
               ||||||||||||||| ||||||||
Sbjct: 3019964 gtcgtcgcaggcatcaccatcttc 3019941
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>dbj|AB231866.1| Branchiostoma floridae gene for zinc finger protein AmphiZic, complete
             cds
          Length = 155361

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 481   caaatcatgatatttttgtt 500
             ||||||||||||||||||||
Sbjct: 15617 caaatcatgatatttttgtt 15636


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,434,618
Number of Sequences: 3902068
Number of extensions: 4434618
Number of successful extensions: 80370
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80060
Number of HSP's gapped (non-prelim): 309
length of query: 515
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 492
effective length of database: 17,143,297,704
effective search space: 8434502470368
effective search space used: 8434502470368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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