| Clone Name | baal29b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_465852.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 194 bits (98), Expect = 2e-46 Identities = 236/282 (83%) Strand = Plus / Plus Query: 139 gcgcaagtacaacatcccgcctggtcctcggccatggccggtgatcggcaatctcaacct 198 ||||||||||||||||||||| || ||||| |||||||||||||||||||| || ||||| Sbjct: 117 gcgcaagtacaacatcccgccggggcctcgcccatggccggtgatcggcaacctgaacct 176 Query: 199 cataggccccctgccacaccgctccatccatgtgctctcgtcgcggtatggcccgctcat 258 || ||| |||| || |||||||||||| | ||||| |||||| ||||||||||| Sbjct: 177 gatcggcgccctcccgtaccgctccatccgcgacctctcccggcggtacggcccgctcat 236 Query: 259 gtccctccggtttggttccttccctatcgtcgtcggctcctcccttgaggcggccgagtt 318 |||||||||||| || |||||||| ||||||| ||||| || | || |||| || Sbjct: 237 gtccctccggttcggctccttccccgtcgtcgtgggctcgtcggtggacatggccaggta 296 Query: 319 cttcctgaggacacacgacctggcgttcctcgaccggccccggatggcctgcggcaagta 378 |||||||||| | |||||||||||||||| |||||||| ||| |||| ||||| ||| Sbjct: 297 cttcctgagggccaacgacctggcgttcctggaccggccgaggacggccgccggcaggta 356 Query: 379 caccgtgtacaactactccggcatgctgtggtcgcactacgg 420 |||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 357 caccgtgtacaactacgccggcgtgctgtggtcgcactacgg 398 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctg 535 |||||| |||||| |||||||||||||||||||||||||| |||| Sbjct: 469 gagcacgtccgtgccgaggaggtgcgcgccatgctgcgcggcctg 513
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 194 bits (98), Expect = 2e-46 Identities = 236/282 (83%) Strand = Plus / Plus Query: 139 gcgcaagtacaacatcccgcctggtcctcggccatggccggtgatcggcaatctcaacct 198 ||||||||||||||||||||| || ||||| |||||||||||||||||||| || ||||| Sbjct: 17905457 gcgcaagtacaacatcccgccggggcctcgcccatggccggtgatcggcaacctgaacct 17905516 Query: 199 cataggccccctgccacaccgctccatccatgtgctctcgtcgcggtatggcccgctcat 258 || ||| |||| || |||||||||||| | ||||| |||||| ||||||||||| Sbjct: 17905517 gatcggcgccctcccgtaccgctccatccgcgacctctcccggcggtacggcccgctcat 17905576 Query: 259 gtccctccggtttggttccttccctatcgtcgtcggctcctcccttgaggcggccgagtt 318 |||||||||||| || |||||||| ||||||| ||||| || | || |||| || Sbjct: 17905577 gtccctccggttcggctccttccccgtcgtcgtgggctcgtcggtggacatggccaggta 17905636 Query: 319 cttcctgaggacacacgacctggcgttcctcgaccggccccggatggcctgcggcaagta 378 |||||||||| | |||||||||||||||| |||||||| ||| |||| ||||| ||| Sbjct: 17905637 cttcctgagggccaacgacctggcgttcctggaccggccgaggacggccgccggcaggta 17905696 Query: 379 caccgtgtacaactactccggcatgctgtggtcgcactacgg 420 |||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 17905697 caccgtgtacaactacgccggcgtgctgtggtcgcactacgg 17905738 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctg 535 |||||| |||||| |||||||||||||||||||||||||| |||| Sbjct: 17905809 gagcacgtccgtgccgaggaggtgcgcgccatgctgcgcggcctg 17905853
>dbj|AP004022.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_B06 Length = 99637 Score = 194 bits (98), Expect = 2e-46 Identities = 236/282 (83%) Strand = Plus / Plus Query: 139 gcgcaagtacaacatcccgcctggtcctcggccatggccggtgatcggcaatctcaacct 198 ||||||||||||||||||||| || ||||| |||||||||||||||||||| || ||||| Sbjct: 40090 gcgcaagtacaacatcccgccggggcctcgcccatggccggtgatcggcaacctgaacct 40149 Query: 199 cataggccccctgccacaccgctccatccatgtgctctcgtcgcggtatggcccgctcat 258 || ||| |||| || |||||||||||| | ||||| |||||| ||||||||||| Sbjct: 40150 gatcggcgccctcccgtaccgctccatccgcgacctctcccggcggtacggcccgctcat 40209 Query: 259 gtccctccggtttggttccttccctatcgtcgtcggctcctcccttgaggcggccgagtt 318 |||||||||||| || |||||||| ||||||| ||||| || | || |||| || Sbjct: 40210 gtccctccggttcggctccttccccgtcgtcgtgggctcgtcggtggacatggccaggta 40269 Query: 319 cttcctgaggacacacgacctggcgttcctcgaccggccccggatggcctgcggcaagta 378 |||||||||| | |||||||||||||||| |||||||| ||| |||| ||||| ||| Sbjct: 40270 cttcctgagggccaacgacctggcgttcctggaccggccgaggacggccgccggcaggta 40329 Query: 379 caccgtgtacaactactccggcatgctgtggtcgcactacgg 420 |||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 40330 caccgtgtacaactacgccggcgtgctgtggtcgcactacgg 40371 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctg 535 |||||| |||||| |||||||||||||||||||||||||| |||| Sbjct: 40442 gagcacgtccgtgccgaggaggtgcgcgccatgctgcgcggcctg 40486
>dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654A08 Length = 154812 Score = 194 bits (98), Expect = 2e-46 Identities = 236/282 (83%) Strand = Plus / Plus Query: 139 gcgcaagtacaacatcccgcctggtcctcggccatggccggtgatcggcaatctcaacct 198 ||||||||||||||||||||| || ||||| |||||||||||||||||||| || ||||| Sbjct: 144988 gcgcaagtacaacatcccgccggggcctcgcccatggccggtgatcggcaacctgaacct 145047 Query: 199 cataggccccctgccacaccgctccatccatgtgctctcgtcgcggtatggcccgctcat 258 || ||| |||| || |||||||||||| | ||||| |||||| ||||||||||| Sbjct: 145048 gatcggcgccctcccgtaccgctccatccgcgacctctcccggcggtacggcccgctcat 145107 Query: 259 gtccctccggtttggttccttccctatcgtcgtcggctcctcccttgaggcggccgagtt 318 |||||||||||| || |||||||| ||||||| ||||| || | || |||| || Sbjct: 145108 gtccctccggttcggctccttccccgtcgtcgtgggctcgtcggtggacatggccaggta 145167 Query: 319 cttcctgaggacacacgacctggcgttcctcgaccggccccggatggcctgcggcaagta 378 |||||||||| | |||||||||||||||| |||||||| ||| |||| ||||| ||| Sbjct: 145168 cttcctgagggccaacgacctggcgttcctggaccggccgaggacggccgccggcaggta 145227 Query: 379 caccgtgtacaactactccggcatgctgtggtcgcactacgg 420 |||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 145228 caccgtgtacaactacgccggcgtgctgtggtcgcactacgg 145269 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctg 535 |||||| |||||| |||||||||||||||||||||||||| |||| Sbjct: 145340 gagcacgtccgtgccgaggaggtgcgcgccatgctgcgcggcctg 145384
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 169 gccatggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatcca 228 |||||||||| | |||||||| ||||||||||| ||| | |||||||||||||||||||| Sbjct: 16322513 gccatggccgatcatcggcaacctcaacctcattggcgcgctgccacaccgctccatcca 16322454 Query: 229 tgtgctctcgtcgcggtatggcccgctcat 258 | |||||| ||| || ||||||||||| Sbjct: 16322453 cgagctctccaagcgctacggcccgctcat 16322424 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 173 tggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatccatgtg 232 |||||| | |||||||| ||||||||||| ||| | |||||||||||||||||||| | | Sbjct: 16308446 tggccgatcatcggcaacctcaacctcattggcgcgctgccacaccgctccatccacgag 16308387 Query: 233 ctctcgtcgcggtatggcccgctcatgtccctccggtttggttccttccctatcgtcgtc 292 ||||| ||| || |||||||| ||| |||||||| || || ||||| |||||||| Sbjct: 16308386 ctctccaagcgctacggcccgctgatgcagctccggttcgggtcattccccgtcgtcgtc 16308327 Query: 293 ggctc 297 ||||| Sbjct: 16308326 ggctc 16308322 Score = 71.9 bits (36), Expect = 2e-09 Identities = 198/252 (78%) Strand = Plus / Minus Query: 143 aagtacaacatcccgcctggtcctcggccatggccggtgatcggcaatctcaacctcata 202 ||||| ||| ||||||| ||||| |||||||||| | |||||||| || |||||| | Sbjct: 16353254 aagtataacctcccgccgggtcccaagccatggccgatcatcggcaacctaaacctcgtc 16353195 Query: 203 ggccccctgccacaccgctccatccatgtgctctcgtcgcggtatggcccgctcatgtcc 262 || | || |||||||| |||||||| | |||||| ||| || ||||| ||| | | | Sbjct: 16353194 ggtgcgctcccacaccgttccatccacgagctctcaaggcgctacggcccactcgtatac 16353135 Query: 263 ctccggtttggttccttccctatcgtcgtcggctcctcccttgaggcggccgagttcttc 322 |||||||| || |||||||| ||||||||||||| ||| | ||| |||| ||||||| Sbjct: 16353134 ctccggttcgggtccttccccgtcgtcgtcggctcgtccgtcgagatggccaggttcttc 16353075 Query: 323 ctgaggacacacgacctggcgttcctcgaccggccccggatggcctgcggcaagtacacc 382 || | ||| | |||| ||||||| ||||||| ||| ||| |||| ||||||| ||||| Sbjct: 16353074 ctcaagacgcgcgacgcggcgttcatcgaccgccccaggacggccgccggcaagcacacc 16353015 Query: 383 gtgtacaactac 394 | ||||||||| Sbjct: 16353014 gcctacaactac 16353003 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 495 acatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 16333706 acatccgtggcgaggaggtgcgcgcgctgctgcgcgacctgca 16333748 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 16308128 gagcacatccgcggcgaggaggtgcgcgcgctgctgcgcgacctgca 16308082 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 145 gtacaacatcccgcctggtcctcggccatggccggtgatcggcaatctcaacctcatagg 204 ||||||| |||| ||||| ||| ||||||||| | |||||||| ||||||||||| || Sbjct: 16338314 gtacaacctccctcctgggcctaagccatggccaatcatcggcaacctcaacctcatggg 16338373 Query: 205 ccccctgccacaccgctccatcca 228 | | || ||||||||||||||||| Sbjct: 16338374 ctcactcccacaccgctccatcca 16338397 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 169 gccatggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatcca 228 |||||||||| | |||||||| || |||||||| || | ||||| |||||||||||||| Sbjct: 4724168 gccatggccgatcatcggcaacctgaacctcatcagctcgctgccgcaccgctccatcca 4724109 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||| |||||||||||||||| |||| ||||| ||||| Sbjct: 16338660 gagcacatccgccgcgaggaggtgcgcgcgctgctccgcgatctgca 16338706 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||| ||||||||||||||| |||||||||| ||||| Sbjct: 4723846 gagcacatccgccacgaggaggtgcgcgcgctgctgcgcgagctgca 4723800 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 173 tggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatcca 228 |||||||| |||||||| |||||||| | ||| | || || |||||||||||||| Sbjct: 16333384 tggccggtcatcggcaacctcaacctggtgggcacgctcccgcaccgctccatcca 16333439
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0046G12 Length = 189391 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 169 gccatggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatcca 228 |||||||||| | |||||||| ||||||||||| ||| | |||||||||||||||||||| Sbjct: 11060 gccatggccgatcatcggcaacctcaacctcattggcgcgctgccacaccgctccatcca 11001 Query: 229 tgtgctctcgtcgcggtatggcccgctcat 258 | |||||| ||| || ||||||||||| Sbjct: 11000 cgagctctccaagcgctacggcccgctcat 10971 Score = 71.9 bits (36), Expect = 2e-09 Identities = 198/252 (78%) Strand = Plus / Minus Query: 143 aagtacaacatcccgcctggtcctcggccatggccggtgatcggcaatctcaacctcata 202 ||||| ||| ||||||| ||||| |||||||||| | |||||||| || |||||| | Sbjct: 41801 aagtataacctcccgccgggtcccaagccatggccgatcatcggcaacctaaacctcgtc 41742 Query: 203 ggccccctgccacaccgctccatccatgtgctctcgtcgcggtatggcccgctcatgtcc 262 || | || |||||||| |||||||| | |||||| ||| || ||||| ||| | | | Sbjct: 41741 ggtgcgctcccacaccgttccatccacgagctctcaaggcgctacggcccactcgtatac 41682 Query: 263 ctccggtttggttccttccctatcgtcgtcggctcctcccttgaggcggccgagttcttc 322 |||||||| || |||||||| ||||||||||||| ||| | ||| |||| ||||||| Sbjct: 41681 ctccggttcgggtccttccccgtcgtcgtcggctcgtccgtcgagatggccaggttcttc 41622 Query: 323 ctgaggacacacgacctggcgttcctcgaccggccccggatggcctgcggcaagtacacc 382 || | ||| | |||| ||||||| ||||||| ||| ||| |||| ||||||| ||||| Sbjct: 41621 ctcaagacgcgcgacgcggcgttcatcgaccgccccaggacggccgccggcaagcacacc 41562 Query: 383 gtgtacaactac 394 | ||||||||| Sbjct: 41561 gcctacaactac 41550 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 495 acatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 22253 acatccgtggcgaggaggtgcgcgcgctgctgcgcgacctgca 22295 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 145 gtacaacatcccgcctggtcctcggccatggccggtgatcggcaatctcaacctcatagg 204 ||||||| |||| ||||| ||| ||||||||| | |||||||| ||||||||||| || Sbjct: 26861 gtacaacctccctcctgggcctaagccatggccaatcatcggcaacctcaacctcatggg 26920 Query: 205 ccccctgccacaccgctccatcca 228 | | || ||||||||||||||||| Sbjct: 26921 ctcactcccacaccgctccatcca 26944 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||| |||||||||||||||| |||| ||||| ||||| Sbjct: 27207 gagcacatccgccgcgaggaggtgcgcgcgctgctccgcgatctgca 27253 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 173 tggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatcca 228 |||||||| |||||||| |||||||| | ||| | || || |||||||||||||| Sbjct: 21931 tggccggtcatcggcaacctcaacctggtgggcacgctcccgcaccgctccatcca 21986
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 169 gccatggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatcca 228 |||||||||| | |||||||| ||||||||||| ||| | |||||||||||||||||||| Sbjct: 139029 gccatggccgatcatcggcaacctcaacctcattggcgcgctgccacaccgctccatcca 138970 Query: 229 tgtgctctcgtcgcggtatggcccgctcat 258 | |||||| ||| || ||||||||||| Sbjct: 138969 cgagctctccaagcgctacggcccgctcat 138940 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 173 tggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatccatgtg 232 |||||| | |||||||| ||||||||||| ||| | |||||||||||||||||||| | | Sbjct: 124962 tggccgatcatcggcaacctcaacctcattggcgcgctgccacaccgctccatccacgag 124903 Query: 233 ctctcgtcgcggtatggcccgctcatgtccctccggtttggttccttccctatcgtcgtc 292 ||||| ||| || |||||||| ||| |||||||| || || ||||| |||||||| Sbjct: 124902 ctctccaagcgctacggcccgctgatgcagctccggttcgggtcattccccgtcgtcgtc 124843 Query: 293 ggctc 297 ||||| Sbjct: 124842 ggctc 124838 Score = 71.9 bits (36), Expect = 2e-09 Identities = 198/252 (78%) Strand = Plus / Minus Query: 143 aagtacaacatcccgcctggtcctcggccatggccggtgatcggcaatctcaacctcata 202 ||||| ||| ||||||| ||||| |||||||||| | |||||||| || |||||| | Sbjct: 169770 aagtataacctcccgccgggtcccaagccatggccgatcatcggcaacctaaacctcgtc 169711 Query: 203 ggccccctgccacaccgctccatccatgtgctctcgtcgcggtatggcccgctcatgtcc 262 || | || |||||||| |||||||| | |||||| ||| || ||||| ||| | | | Sbjct: 169710 ggtgcgctcccacaccgttccatccacgagctctcaaggcgctacggcccactcgtatac 169651 Query: 263 ctccggtttggttccttccctatcgtcgtcggctcctcccttgaggcggccgagttcttc 322 |||||||| || |||||||| ||||||||||||| ||| | ||| |||| ||||||| Sbjct: 169650 ctccggttcgggtccttccccgtcgtcgtcggctcgtccgtcgagatggccaggttcttc 169591 Query: 323 ctgaggacacacgacctggcgttcctcgaccggccccggatggcctgcggcaagtacacc 382 || | ||| | |||| ||||||| ||||||| ||| ||| |||| ||||||| ||||| Sbjct: 169590 ctcaagacgcgcgacgcggcgttcatcgaccgccccaggacggccgccggcaagcacacc 169531 Query: 383 gtgtacaactac 394 | ||||||||| Sbjct: 169530 gcctacaactac 169519 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 495 acatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 150222 acatccgtggcgaggaggtgcgcgcgctgctgcgcgacctgca 150264 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 124644 gagcacatccgcggcgaggaggtgcgcgcgctgctgcgcgacctgca 124598 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Plus Query: 145 gtacaacatcccgcctggtcctcggccatggccggtgatcggcaatctcaacctcatagg 204 ||||||| |||| ||||| ||| ||||||||| | |||||||| ||||||||||| || Sbjct: 154830 gtacaacctccctcctgggcctaagccatggccaatcatcggcaacctcaacctcatggg 154889 Query: 205 ccccctgccacaccgctccatcca 228 | | || ||||||||||||||||| Sbjct: 154890 ctcactcccacaccgctccatcca 154913 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||| |||||||||||||||| |||| ||||| ||||| Sbjct: 155176 gagcacatccgccgcgaggaggtgcgcgcgctgctccgcgatctgca 155222 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 173 tggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatcca 228 |||||||| |||||||| |||||||| | ||| | || || |||||||||||||| Sbjct: 149900 tggccggtcatcggcaacctcaacctggtgggcacgctcccgcaccgctccatcca 149955
>dbj|AK107584.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-E07, full insert sequence Length = 1865 Score = 73.8 bits (37), Expect = 5e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 173 tggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatccatgtg 232 |||||| | |||||||| ||||||||||| ||| | |||||||||||||||||||| | | Sbjct: 193 tggccgatcatcggcaacctcaacctcattggcgcgctgccacaccgctccatccacgag 252 Query: 233 ctctcgtcgcggtatggcccgctcatgtccctccggtttggttccttccctatcgtcgtc 292 ||||| ||| || |||||||| ||| |||||||| || || ||||| |||||||| Sbjct: 253 ctctccaagcgctacggcccgctgatgcagctccggttcgggtcattccccgtcgtcgtc 312 Query: 293 ggctc 297 ||||| Sbjct: 313 ggctc 317 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 511 gagcacatccgcggcgaggaggtgcgcgcgttgctgcgcgacctgca 557
>dbj|AK111616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107D15, full insert sequence Length = 1825 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 495 acatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 521 acatccgtggcgaggaggtgcgcgcgctgctgcgcgacctgca 563 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 173 tggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatcca 228 |||||||| |||||||| |||||||| | ||| | || || |||||||||||||| Sbjct: 199 tggccggtcatcggcaacctcaacctggtgggcacgctcccgcaccgctccatcca 254
>dbj|AK100321.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079F15, full insert sequence Length = 3587 Score = 69.9 bits (35), Expect = 8e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 495 acatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1557 acatccgtggcgaggaggtgcgcgcgctgctgcgcgacctgca 1599 Score = 40.1 bits (20), Expect = 7.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 173 tggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatcca 228 |||||||| |||||||| |||||||| | ||| | || || |||||||||||||| Sbjct: 1235 tggccggtcatcggcaacctcaacctggtgggcacgctcccgcaccgctccatcca 1290
>ref|XM_482757.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1563 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 173 tggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatccatgtg 232 ||||| || |||||||| |||||||||| ||| | ||||| |||||||||||||||| | Sbjct: 121 tggcccgtcatcggcaacttcaacctcatcggcgcgctgccgcaccgctccatccatgag 180 Query: 233 ctctc 237 ||||| Sbjct: 181 ctctc 185
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 173 tggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatccatgtg 232 ||||| || |||||||| |||||||||| ||| | ||||| |||||||||||||||| | Sbjct: 22363578 tggcccgtcatcggcaacttcaacctcatcggcgcgctgccgcaccgctccatccatgag 22363519 Query: 233 ctctc 237 ||||| Sbjct: 22363518 ctctc 22363514
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1144B06 Length = 133689 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 173 tggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatccatgtg 232 ||||| || |||||||| |||||||||| ||| | ||||| |||||||||||||||| | Sbjct: 60561 tggcccgtcatcggcaacttcaacctcatcggcgcgctgccgcaccgctccatccatgag 60502 Query: 233 ctctc 237 ||||| Sbjct: 60501 ctctc 60497
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Minus Query: 505 cgaggaggtgcgcgccatgctgcgcgac 532 |||||||||||||||| ||||||||||| Sbjct: 497330 cgaggaggtgcgcgccctgctgcgcgac 497303 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 gttcctcgaccggccccgga 362 |||||||||||||||||||| Sbjct: 7895974 gttcctcgaccggccccgga 7895955 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 gccaccgccgtcttcctggt 108 |||||||||||||||||||| Sbjct: 7507132 gccaccgccgtcttcctggt 7507151
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 48.1 bits (24), Expect = 0.031 Identities = 36/40 (90%) Strand = Plus / Minus Query: 71 tccctggtggtcctgctggccaccgccgtcttcctggtgg 110 ||||||||||| ||||||| || |||||| |||||||||| Sbjct: 1576664 tccctggtggtgctgctgggcaacgccgtattcctggtgg 1576625
>dbj|AP006446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1097H10 Length = 159732 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Minus Query: 169 gccatggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatcca 228 |||||||||| | |||||||| || |||||||| || | ||||| |||||||||||||| Sbjct: 41772 gccatggccgatcatcggcaacctgaacctcatcagctcgctgccgcaccgctccatcca 41713 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||| ||||||||||||||| |||||||||| ||||| Sbjct: 41450 gagcacatccgccacgaggaggtgcgcgcgctgctgcgcgagctgca 41404
>dbj|AK100987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145F09, full insert sequence Length = 1897 Score = 48.1 bits (24), Expect = 0.031 Identities = 51/60 (85%) Strand = Plus / Plus Query: 169 gccatggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccatcca 228 |||||||||| | |||||||| || |||||||| || | ||||| |||||||||||||| Sbjct: 151 gccatggccgatcatcggcaacctgaacctcatcagctcgctgccgcaccgctccatcca 210 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcgcgacctgca 537 ||||||||||| ||||||||||||||| |||||||||| ||||| Sbjct: 473 gagcacatccgccacgaggaggtgcgcgcgctgctgcgcgagctgca 519
>dbj|AB070949.1| Streptomyces avermitilis polyene macrolide biosynthetic gene cluster Length = 78210 Score = 48.1 bits (24), Expect = 0.031 Identities = 27/28 (96%) Strand = Plus / Plus Query: 505 cgaggaggtgcgcgccatgctgcgcgac 532 |||||||||||||||| ||||||||||| Sbjct: 67528 cgaggaggtgcgcgccctgctgcgcgac 67555
>ref|XM_462011.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G11726g) partial mRNA Length = 1041 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 gcctggtcctcggccatggccggtga 182 ||||||||||||||| |||||||||| Sbjct: 685 gcctggtcctcggccttggccggtga 710
>gb|AY072297.1| Zea mays cytochrome P450 monooxygenase CYP92A1 mRNA, complete cds Length = 1711 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Plus Query: 491 gagcacatccgtggcgaggaggtgcgcgccatgctgcg 528 ||||||||||| | |||||||||||||| |||||||| Sbjct: 451 gagcacatccgcgacgaggaggtgcgcgtgatgctgcg 488 Score = 42.1 bits (21), Expect = 1.9 Identities = 48/57 (84%) Strand = Plus / Plus Query: 169 gccatggccggtgatcggcaatctcaacctcataggccccctgccacaccgctccat 225 |||||||||| | |||||||| || |||||||| ||| ||||| ||||||||||| Sbjct: 129 gccatggccgatcatcggcaaccttaacctcatgggcgagctgccccaccgctccat 185
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 gcctggtcctcggccatggccggtga 182 ||||||||||||||| |||||||||| Sbjct: 914706 gcctggtcctcggccttggccggtga 914731
>gb|AC121589.3| Mus musculus BAC clone RP23-281G14 from chromosome 3, complete sequence Length = 215395 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cacctgcagaggctcctttaa 50 ||||||||||||||||||||| Sbjct: 207932 cacctgcagaggctcctttaa 207912
>gb|AC132402.3| Mus musculus BAC clone RP23-404I24 from chromosome 19, complete sequence Length = 217490 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 tgctacgcaagctatggctga 455 ||||||||||||||||||||| Sbjct: 203739 tgctacgcaagctatggctga 203759
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 506 gaggaggtgcgcgccatgctg 526 ||||||||||||||||||||| Sbjct: 4038065 gaggaggtgcgcgccatgctg 4038085
>emb|AJ605540.1| Streptomyces peucetius cyp7863 gene for putative cytochrome P450, strain ATCC 27952 Length = 1200 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 505 cgaggaggtgcgcgccatgctgcgcgacc 533 |||| ||||||||||| |||||||||||| Sbjct: 153 cgagcaggtgcgcgccgtgctgcgcgacc 181
>dbj|AK042155.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630064F15 product:CD5 antigen, full insert sequence Length = 1487 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 tgctacgcaagctatggctga 455 ||||||||||||||||||||| Sbjct: 1442 tgctacgcaagctatggctga 1462
>gb|AC016727.10| Homo sapiens BAC clone RP11-355B11 from 2, complete sequence Length = 159692 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 cctccctggtggtcctgctgg 89 ||||||||||||||||||||| Sbjct: 7314 cctccctggtggtcctgctgg 7334
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 ggcgccctccctggtggtcct 84 ||||||||||||||||||||| Sbjct: 30915 ggcgccctccctggtggtcct 30895
>emb|AL935326.13| Mouse DNA sequence from clone RP23-10L17 on chromosome 2, complete sequence Length = 224044 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 cctttgtcttcagcagttctt 22 ||||||||||||||||||||| Sbjct: 43647 cctttgtcttcagcagttctt 43627
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 ggcgccctccctggtggtcct 84 ||||||||||||||||||||| Sbjct: 227626 ggcgccctccctggtggtcct 227606
>gb|AC122493.4| Mus musculus BAC clone RP24-392M11 from 3, complete sequence Length = 161477 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cacctgcagaggctcctttaa 50 ||||||||||||||||||||| Sbjct: 11867 cacctgcagaggctcctttaa 11847
>gb|AC132247.3| Mus musculus BAC clone RP24-424J1 from 19, complete sequence Length = 187078 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 435 tgctacgcaagctatggctga 455 ||||||||||||||||||||| Sbjct: 37561 tgctacgcaagctatggctga 37581
>ref|XM_523668.1| PREDICTED: Pan troglodytes similar to phospholipase C delta 3; PLC delta3 (LOC468279), mRNA Length = 2394 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 cgaggaggtgcgcgccatgctgcg 528 |||||| ||||||||||||||||| Sbjct: 663 cgaggacgtgcgcgccatgctgcg 686
>ref|NM_195030.1| Oryza sativa (japonica cultivar-group) putative cytochrome P450 (OSJNBb0015J03.2), mRNA Length = 3000 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 gtatggcccgctcatgtccctccg 267 |||||||||||||||||| ||||| Sbjct: 1467 gtatggcccgctcatgtcgctccg 1490
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 507 aggaggtgcgcgccatgctg 526 |||||||||||||||||||| Sbjct: 466392 aggaggtgcgcgccatgctg 466411
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 tgcgcgccatgctgcgcgac 532 |||||||||||||||||||| Sbjct: 2021288 tgcgcgccatgctgcgcgac 2021269
>gb|AY659288.1| Synthetic construct Peudomonas aeruginosa clone FLH051331.01F PA5320 gene, partial cds Length = 1209 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 cgcgacctgcatccgagcac 546 |||||||||||||||||||| Sbjct: 1114 cgcgacctgcatccgagcac 1133
>gb|BC072384.1| Homo sapiens phospholipase C, delta 3, mRNA (cDNA clone MGC:71172 IMAGE:6378601), complete cds Length = 3445 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 cgaggaggtgcgcgccatgctgcg 528 |||||| ||||||||||||||||| Sbjct: 265 cgaggacgtgcgcgccatgctgcg 288
>ref|XM_956755.1| Neurospora crassa OR74A hypothetical protein (NCU05185.1) partial mRNA Length = 3327 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgcgcgccatgctgcgcgac 532 |||||||||||||||||||| Sbjct: 1376 tgcgcgccatgctgcgcgac 1395
>ref|XM_324541.1| Neurospora crassa OR74A hypothetical protein (NCU05185.1) partial mRNA Length = 3327 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 513 tgcgcgccatgctgcgcgac 532 |||||||||||||||||||| Sbjct: 1376 tgcgcgccatgctgcgcgac 1395
>ref|NM_133373.2| Homo sapiens phospholipase C, delta 3 (PLCD3), mRNA Length = 3445 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 cgaggaggtgcgcgccatgctgcg 528 |||||| ||||||||||||||||| Sbjct: 265 cgaggacgtgcgcgccatgctgcg 288
>ref|XM_548052.2| PREDICTED: Canis familiaris similar to phospholipase C delta 3 (LOC490929), mRNA Length = 2601 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 cgaggaggtgcgcgccatgctgcg 528 |||||| ||||||||||||||||| Sbjct: 48 cgaggacgtgcgcgccatgctgcg 71
>gb|AC019210.7| Homo sapiens BAC clone RP11-449G3 from 7, complete sequence Length = 177402 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 gcagctgaggctgacagagc 494 |||||||||||||||||||| Sbjct: 78077 gcagctgaggctgacagagc 78096
>gb|AC011228.9| Homo sapiens BAC clone GS1-18A18 from 7, complete sequence Length = 163782 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 gcagctgaggctgacagagc 494 |||||||||||||||||||| Sbjct: 79558 gcagctgaggctgacagagc 79577
>gb|AC140953.1| Pan troglodytes BAC clone RP43-37K18 from 7, complete sequence Length = 204813 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 gcagctgaggctgacagagc 494 |||||||||||||||||||| Sbjct: 157371 gcagctgaggctgacagagc 157352
>emb|AL590133.32| Human DNA sequence from clone RP11-316M1 on chromosome 1 Contains the SETDB1 gene for SET domain, bifurcated 1, the LASS2 gene for LAG1 longevity assurance homolog 2 (S. cerevisiae), the ANXA9 gene for annexin A9, the gene for a novel protein (FLJ11280), the gene for TcD37 homolog (HTCD37), the BNIPL gene for BCL2/adenovirus E1B 19kD interacting protein like, the gene for a novel protein (FLJ20519), the gene for small protein effector 1 of Cdc42 (SPEC1), the gene for ALL1-fused gene from chromosome 1q (AF1Q), two novel genes, the 5' end of a novel gene (MGC29891) and two CpG islands, complete sequence Length = 192096 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 gccctccctggtggtcctgc 86 |||||||||||||||||||| Sbjct: 58451 gccctccctggtggtcctgc 58470
>gb|AC091204.3| Drosophila melanogaster 3L NOVECTOR RP98-27G13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185825 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 tggtggtcctgctggccaccgccg 98 ||||||| |||||||||||||||| Sbjct: 184504 tggtggtgctgctggccaccgccg 184527
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gctggccaccgccgtcttcc 104 |||||||||||||||||||| Sbjct: 2150080 gctggccaccgccgtcttcc 2150099
>emb|BX908810.1| Neurospora crassa DNA linkage group IV Cosmid contig G3C5 Length = 70104 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 tgcgcgccatgctgcgcgac 532 |||||||||||||||||||| Sbjct: 41106 tgcgcgccatgctgcgcgac 41087
>emb|BX842577.1| Mycobacterium tuberculosis H37Rv complete genome; segment 6/13 Length = 347496 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 tgcgcgccatgctgcgcgac 532 |||||||||||||||||||| Sbjct: 292611 tgcgcgccatgctgcgcgac 292592
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14 Length = 291050 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 513 tgcgcgccatgctgcgcgac 532 |||||||||||||||||||| Sbjct: 100326 tgcgcgccatgctgcgcgac 100307
>emb|AL834392.1|HSM805471 Homo sapiens mRNA; cDNA DKFZp761F2423 (from clone DKFZp761F2423) Length = 3321 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 cgaggaggtgcgcgccatgctgcg 528 |||||| ||||||||||||||||| Sbjct: 142 cgaggacgtgcgcgccatgctgcg 165
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 gtatggcccgctcatgtccctccg 267 |||||||||||||||||| ||||| Sbjct: 51050 gtatggcccgctcatgtcgctccg 51073
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccctggtggtcctgctggcc 91 |||||||||||||||||||| Sbjct: 316104 ccctggtggtcctgctggcc 316085
>gb|AC169374.2| Sorghum bicolor clone SB_BBc0019I06, complete sequence Length = 129695 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 ggcccgctcatgtccctccg 267 |||||||||||||||||||| Sbjct: 123164 ggcccgctcatgtccctccg 123183
>gb|AC091221.3| Drosophila melanogaster 3L BAC RP98-9I19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185790 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 tggtggtcctgctggccaccgccg 98 ||||||| |||||||||||||||| Sbjct: 163103 tggtggtgctgctggccaccgccg 163080
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 244 gtatggcccgctcatgtccctccg 267 |||||||||||||||||| ||||| Sbjct: 8951 gtatggcccgctcatgtcgctccg 8928
>gb|AE005992.1| Caulobacter crescentus CB15 section 318 of 359 of the complete genome Length = 12497 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 cctggtcctcggccatggcc 177 |||||||||||||||||||| Sbjct: 5625 cctggtcctcggccatggcc 5644
>ref|NM_139912.3| Drosophila melanogaster bip1 CG7574-RA (bip1), mRNA Length = 1826 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 tggtggtcctgctggccaccgccg 98 ||||||| |||||||||||||||| Sbjct: 702 tggtggtgctgctggccaccgccg 679
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 gtatggcccgctcatgtccctccg 267 |||||||||||||||||| ||||| Sbjct: 4283509 gtatggcccgctcatgtcgctccg 4283532
>gb|AC142472.1| Homo sapiens chromosome 17, clone XXfos-8119G3, complete sequence Length = 35050 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 cgaggaggtgcgcgccatgctgcg 528 |||||| ||||||||||||||||| Sbjct: 31486 cgaggacgtgcgcgccatgctgcg 31509
>gb|AC007919.18| Homo sapiens 3 BAC RP11-408H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184989 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aggctcctttaatggaggta 58 |||||||||||||||||||| Sbjct: 148178 aggctcctttaatggaggta 148159
>gb|AE004944.1| Pseudomonas aeruginosa PAO1, section 505 of 529 of the complete genome Length = 9793 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 527 cgcgacctgcatccgagcac 546 |||||||||||||||||||| Sbjct: 8580 cgcgacctgcatccgagcac 8599
>gb|AC002117.2| Homo sapiens chromosome 17, clone CTB-113F3, complete sequence Length = 26492 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 505 cgaggaggtgcgcgccatgctgcg 528 |||||| ||||||||||||||||| Sbjct: 26350 cgaggacgtgcgcgccatgctgcg 26327
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 ggcgaggaggtgcgcgccat 522 |||||||||||||||||||| Sbjct: 1520856 ggcgaggaggtgcgcgccat 1520875
>dbj|AK074240.1| Homo sapiens cDNA FLJ23660 fis, clone HEP00931 Length = 2773 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 cgaggaggtgcgcgccatgctgcg 528 |||||| ||||||||||||||||| Sbjct: 281 cgaggacgtgcgcgccatgctgcg 304
>gb|AE003556.3| Drosophila melanogaster chromosome 3L, section 29 of 83 of the complete sequence Length = 281917 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 tggtggtcctgctggccaccgccg 98 ||||||| |||||||||||||||| Sbjct: 4359 tggtggtgctgctggccaccgccg 4382
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 244 gtatggcccgctcatgtccctccg 267 |||||||||||||||||| ||||| Sbjct: 4284330 gtatggcccgctcatgtcgctccg 4284353
>emb|AJ251944.1|DME251944 Drosophila melanogaster partial bip1 gene for BIP1 protein, exons 1-3 Length = 4151 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 tggtggtcctgctggccaccgccg 98 ||||||| |||||||||||||||| Sbjct: 2232 tggtggtgctgctggccaccgccg 2209
>dbj|AB075844.1| Homo sapiens mRNA for KIAA1964 protein Length = 5926 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 505 cgaggaggtgcgcgccatgctgcg 528 |||||| ||||||||||||||||| Sbjct: 82 cgaggacgtgcgcgccatgctgcg 105 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,409,222 Number of Sequences: 3902068 Number of extensions: 3409222 Number of successful extensions: 68752 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 72 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67520 Number of HSP's gapped (non-prelim): 1228 length of query: 559 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 536 effective length of database: 17,143,297,704 effective search space: 9188807569344 effective search space used: 9188807569344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)