ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal28l21 |
|---|---|
| Clone Library Name | barley_pub |
>ARFJ_ARATH (Q9SKN5) Auxin response factor 10| Length = 693 Score = 163 bits (413), Expect = 2e-40 Identities = 99/157 (63%), Positives = 105/157 (66%), Gaps = 15/157 (9%) Frame = +1 Query: 4 ETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 183 ETEDSSRISWFMGTVS VQVADPIRWPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSN Sbjct: 326 ETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSN 385 Query: 184 MPAIHLAPFSPPRKKLCVPFYPDLPVDG-QFP--SPMFHXXXXXXXXXXXXXXXXXXXTP 354 MP IHL+PFS PRKK+ +P + P G +FP SP F P Sbjct: 386 MPTIHLSPFS-PRKKIRIPQPFEFPFHGTKFPIFSPGF--ANNGGGESMCYLSNDNNNAP 442 Query: 355 AGIQGARHAQ--FGIS----LSDLHL------NKLQS 429 AGIQGAR AQ FG LSDL+L NKL S Sbjct: 443 AGIQGARQAQQLFGSPSPSLLSDLNLSSYTGNNKLHS 479
>ARFP_ARATH (Q93YR9) Auxin response factor 16| Length = 670 Score = 157 bits (398), Expect = 1e-38 Identities = 83/140 (59%), Positives = 93/140 (66%), Gaps = 4/140 (2%) Frame = +1 Query: 4 ETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 183 ETEDSSRISWFMGTVS V V+DPIRWPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN Sbjct: 328 ETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSN 387 Query: 184 MPAIHLAPFSPPRKKLCVPFYPDL-PVDGQFPSPMFHXXXXXXXXXXXXXXXXXXXTPAG 360 + I L FSPPRKK+ +P +PD + P P F P G Sbjct: 388 VHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSF---PSNPLIRSSPLSSVLDNVPVG 444 Query: 361 IQGAR---HAQFGISLSDLH 411 +QGAR H +G+S SDLH Sbjct: 445 LQGARHNAHQYYGLSSSDLH 464
>ARFQ_ARATH (Q84WU6) Auxin response factor 17| Length = 585 Score = 92.4 bits (228), Expect = 5e-19 Identities = 55/133 (41%), Positives = 72/133 (54%), Gaps = 3/133 (2%) Frame = +1 Query: 1 VETEDSSRISWFMGTVS-VVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 177 +ETEDSSRI+WF G VS Q P W SPW+ LQ+TWDEP++LQNVKRV+PW VE+ Sbjct: 322 METEDSSRITWFQGIVSSTYQETGP--WRGSPWKQLQITWDEPEILQNVKRVNPWQVEIA 379 Query: 178 SNMPAIHLAPFSPPRKKLCVPFYPDLPVDGQFPSPMFHXXXXXXXXXXXXXXXXXXXT-- 351 ++ +H PF PP K+L P + G ++ + Sbjct: 380 AHATQLH-TPF-PPAKRLKYPQPGGGFLSGDDGEILYPQSGLSSAAAPDPSPSMFSYSTF 437 Query: 352 PAGIQGARHAQFG 390 PAG+QGAR FG Sbjct: 438 PAGMQGARQYDFG 450
>ARFE_ARATH (P93024) Auxin response factor 5 (Transcription factor MONOPTEROS)| (Auxin-responsive protein IAA24) Length = 902 Score = 62.0 bits (149), Expect = 8e-10 Identities = 29/56 (51%), Positives = 35/56 (62%) Frame = +1 Query: 4 ETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 171 ETEDS + +MGT+ + DP+RWP S WR LQV WDEP RVSPW +E Sbjct: 334 ETEDSGKRR-YMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
>ARFB_ARATH (Q94JM3) Auxin response factor 2 (ARF1-binding protein) (ARF1-BP)| Length = 859 Score = 61.6 bits (148), Expect = 1e-09 Identities = 27/64 (42%), Positives = 36/64 (56%) Frame = +1 Query: 34 FMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFS 213 F GT+ ++ +DP RWP S WR L+V WDE + RVSPW VE PA+ P Sbjct: 348 FTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMP 407 Query: 214 PPRK 225 P++ Sbjct: 408 RPKR 411
>ARFF_ARATH (Q9ZTX8) Auxin response factor 6| Length = 933 Score = 57.0 bits (136), Expect = 3e-08 Identities = 33/85 (38%), Positives = 50/85 (58%) Frame = +1 Query: 4 ETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 183 ETE+SS + +MGT++ + DP RW NS WR ++V WDE + RVS W +E ++ Sbjct: 303 ETEESS-VRRYMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 361 Query: 184 MPAIHLAPFSPPRKKLCVPFYPDLP 258 P ++ +PF K+ P+ P LP Sbjct: 362 FP-MYPSPFPLRLKR---PWPPGLP 382
>ARFS_ARATH (Q8RYC8) Auxin response factor 19 (Auxin-responsive protein IAA22)| Length = 1086 Score = 56.6 bits (135), Expect = 3e-08 Identities = 35/87 (40%), Positives = 43/87 (49%) Frame = +1 Query: 4 ETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 183 ETED + +MGTV+ + DP+RW S WR LQV WDE RVS W +E V Sbjct: 301 ETEDCG-VRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVIT 359 Query: 184 MPAIHLAPFSPPRKKLCVPFYPDLPVD 264 I PF P+ P P +P D Sbjct: 360 PFYICPPPFFRPK----YPRQPGMPDD 382
>ARFD_ARATH (Q9ZTX9) Auxin response factor 4| Length = 788 Score = 56.6 bits (135), Expect = 3e-08 Identities = 29/63 (46%), Positives = 38/63 (60%) Frame = +1 Query: 40 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPP 219 G V+ V DP RWPNS WR L V WDE + + +RVSPW ++ ++P HL+ S P Sbjct: 362 GVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLP--HLSIQSSP 419 Query: 220 RKK 228 R K Sbjct: 420 RPK 422
>ARFH_ARATH (Q9FGV1) Auxin response factor 8| Length = 811 Score = 56.2 bits (134), Expect = 4e-08 Identities = 26/62 (41%), Positives = 39/62 (62%) Frame = +1 Query: 4 ETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 183 ETE+SS + +MGT++ + D +RWPNS WR ++V WDE + RVS W +E ++ Sbjct: 302 ETEESS-VRRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTT 360 Query: 184 MP 189 P Sbjct: 361 FP 362
>ARFG_ARATH (P93022) Auxin response factor 7 (Non-phototropic hypocotyl 4)| (Protein BIPOSTO) (Auxin-responsive protein IAA21/IAA23/IAA25) Length = 1164 Score = 55.8 bits (133), Expect = 6e-08 Identities = 31/73 (42%), Positives = 39/73 (53%) Frame = +1 Query: 4 ETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 183 ETE+ + +MGTV+ + DP+RW NS WR LQ+ WDE RVS W +E V Sbjct: 302 ETEECG-VRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPVLT 360 Query: 184 MPAIHLAPFSPPR 222 I PF PR Sbjct: 361 PFYICPPPFFRPR 373
>ARFC_ARATH (O23661) Auxin response factor 3 (Protein ETTIN)| Length = 608 Score = 50.8 bits (120), Expect = 2e-06 Identities = 26/57 (45%), Positives = 34/57 (59%) Frame = +1 Query: 1 VETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 171 VE+ED+S G +S + DPIRWP S WR L V WD+ + +RVSPW +E Sbjct: 333 VESEDASERR-SPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIE 388
>ARFR_ARATH (Q9C5W9) Auxin response factor 18| Length = 602 Score = 49.3 bits (116), Expect = 5e-06 Identities = 22/51 (43%), Positives = 30/51 (58%) Frame = +1 Query: 76 RWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKK 228 +WP S WR LQV WDEP +Q +VSPW +E P + +P S P ++ Sbjct: 323 QWPASKWRSLQVQWDEPTTVQRPDKVSPWEIE-----PFLATSPISTPAQQ 368
>ARFA_ARATH (Q8L7G0) Auxin response factor 1| Length = 665 Score = 48.9 bits (115), Expect = 7e-06 Identities = 31/82 (37%), Positives = 38/82 (46%) Frame = +1 Query: 34 FMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFS 213 F GT+ VQ W +S WR L+V WDEP + +RVSPW +E + P Sbjct: 308 FSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQP 367 Query: 214 PPRKKLCVPFYPDLPVDGQFPS 279 P R K P P LP PS Sbjct: 368 PQRNKR--PRPPGLPSPATGPS 387
>ARFK_ARATH (Q9ZPY6) Auxin response factor 11| Length = 601 Score = 47.8 bits (112), Expect = 2e-05 Identities = 21/47 (44%), Positives = 26/47 (55%) Frame = +1 Query: 76 RWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSP 216 +WP S WR LQ+ WDEP +Q +VSPW +E PFSP Sbjct: 319 QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIE-----------PFSP 354
>ARFI_ARATH (Q9XED8) Auxin response factor 9| Length = 638 Score = 45.1 bits (105), Expect = 1e-04 Identities = 24/56 (42%), Positives = 31/56 (55%) Frame = +1 Query: 4 ETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 171 E EDS + GTV V+ P W +S WR L+V WDEP + +VSPW +E Sbjct: 289 EGEDSPERR-YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIE 342
>ARFL_ARATH (Q9XID4) Putative auxin response factor 12| Length = 593 Score = 40.8 bits (94), Expect = 0.002 Identities = 27/67 (40%), Positives = 36/67 (53%) Frame = +1 Query: 1 VETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 180 +E +D S F GT+ V P W S WR L+V WDE K+VSPW +E + Sbjct: 298 LEGDDFSERRCF-GTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL- 354 Query: 181 NMPAIHL 201 MPAI++ Sbjct: 355 -MPAINV 360
>ARFV_ARATH (Q9C8N7) Putative auxin response factor 22| Length = 598 Score = 39.3 bits (90), Expect = 0.005 Identities = 25/66 (37%), Positives = 35/66 (53%) Frame = +1 Query: 4 ETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 183 E +D S +F GT+ V P W S WR L+V WDE +VSPW +E + Sbjct: 297 EGDDFSERRYF-GTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL-- 352 Query: 184 MPAIHL 201 MPA+++ Sbjct: 353 MPALNV 358
>ARFU_ARATH (Q9C8N9) Putative auxin response factor 21| Length = 606 Score = 38.9 bits (89), Expect = 0.007 Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Frame = +1 Query: 4 ETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 183 E +D S +F GT+ V P W S WR L+V WDE +VSPW +E Sbjct: 299 EGDDFSERRYF-GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE---- 352 Query: 184 MPAIHLAP-FSPPRKKL 231 HL P + PR L Sbjct: 353 ----HLVPALNVPRSSL 365
>ARFO_ARATH (Q9LQE3) Putative auxin response factor 15| Length = 593 Score = 38.9 bits (89), Expect = 0.007 Identities = 25/66 (37%), Positives = 35/66 (53%) Frame = +1 Query: 4 ETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 183 E +D S +F GT+ V P W S WR L+V WDE +VSPW +E + Sbjct: 299 EGDDLSERRYF-GTIIGVSNFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL-- 354 Query: 184 MPAIHL 201 MPA+++ Sbjct: 355 MPALNV 360
>ARFT_ARATH (Q9C7I9) Putative auxin response factor 20| Length = 606 Score = 37.7 bits (86), Expect = 0.016 Identities = 22/56 (39%), Positives = 28/56 (50%) Frame = +1 Query: 4 ETEDSSRISWFMGTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 171 E +D S +F GT+ V P W S WR L+V WDE +VSPW +E Sbjct: 299 EGDDFSERRYF-GTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIE 352
>ARFM_ARATH (Q9FX25) Putative auxin response factor 13| Length = 623 Score = 37.7 bits (86), Expect = 0.016 Identities = 22/63 (34%), Positives = 33/63 (52%) Frame = +1 Query: 40 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPP 219 GT+ V P W +S WR L+V WDE +VSPW +E + +P+ ++ S Sbjct: 312 GTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL--IPSSDISQSSLK 368 Query: 220 RKK 228 +KK Sbjct: 369 KKK 371
>ARFN_ARATH (Q9LQE8) Putative auxin response factor 14| Length = 605 Score = 36.6 bits (83), Expect = 0.035 Identities = 22/58 (37%), Positives = 27/58 (46%) Frame = +1 Query: 40 GTVSVVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFS 213 GT+ V P W S WR L+V WDE +VSPW +E HL P+S Sbjct: 310 GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIE--------HLTPWS 358
>SEM1A_DROME (Q24322) Semaphorin-1A precursor (Semaphorin-I) (Sema I)| Length = 850 Score = 34.7 bits (78), Expect = 0.13 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 4/89 (4%) Frame = -2 Query: 346 RQGNSTSDXXXXXXXXXXXGTSGTETGRRPEGPGR----TEHRASSEEARTEQGEWPACL 179 R+G+ S T GR P R T+HR++S + + +Q + P Sbjct: 755 RRGDGFSTTRSVKKAVNNTNTRNRSLGRARRQPPRHGIVTQHRSNSPQQQQQQSQQPHSS 814 Query: 178 RPAQPAMGSPSSHSAAGPVHPKSPEEVSK 92 + P M S SS S A P SP+E K Sbjct: 815 SGSSPVM-SNSSSSPAPPSSSPSPQESPK 842
>M940_ARATH (P92530) Hypothetical mitochondrial protein AtMg00940 (ORF164)| Length = 164 Score = 34.7 bits (78), Expect = 0.13 Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +1 Query: 1 VETEDSSRISWFMGTV-SVVQVADPIRWPNSPW 96 +ETEDSSRI+WF G V Q P W SPW Sbjct: 118 METEDSSRITWFQGIVFYTYQETGP--WRGSPW 148
>CEBPD_HUMAN (P49716) CCAAT/enhancer-binding protein delta (C/EBP delta)| (Nuclear factor NF-IL6-beta) (NF-IL6-beta) Length = 269 Score = 32.0 bits (71), Expect = 0.87 Identities = 23/56 (41%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = -2 Query: 262 RPEGPGRTEHRASSEEARTEQGEWPACLRPAQ--PAMGSPSSHSAAG-PVHPKSPE 104 RP GPG R E G+ P L PAQ P + S +AAG P P SPE Sbjct: 107 RPLGPGPAAPRLLKREPDWGDGDAPGSLLPAQVGPCAQTVVSLAAAGQPTPPTSPE 162
>RS19_METKA (Q8TWP2) 30S ribosomal protein S19P| Length = 149 Score = 31.6 bits (70), Expect = 1.1 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -3 Query: 303 EWVSVEHRGRKLAVDRKVRVERNTELLPRRRERSKVNG 190 EWV +RG L K+ +E ELLP R+ RS G Sbjct: 17 EWVEFRYRGYTLGELMKMPIEEFIELLPARQRRSLKRG 54
>2ACA_HUMAN (Q06190) Serine/threonine-protein phosphatase 2A 72/130 kDa| regulatory subunit B (PP2A, subunit B, B''-PR72/PR130) (PP2A, subunit B, B72/B130 isoforms) (PP2A, subunit B, PR72/PR130 isoforms) (PP2A, subunit B, R3 isoform) Length = 1150 Score = 31.6 bits (70), Expect = 1.1 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +1 Query: 163 LVELVSNMPAIHLAPFSPPRKKLCVPFYPDL 255 L EL+SNMP++ L PFSP P Y D+ Sbjct: 307 LTELISNMPSLQLTPFSPVFGTEQPPKYEDV 337
>MMP9_RABIT (P41246) Matrix metalloproteinase-9 precursor (EC 3.4.24.35)| (MMP-9) (92 kDa type IV collagenase) (92 kDa gelatinase) (Gelatinase B) (GELB) Length = 707 Score = 31.2 bits (69), Expect = 1.5 Identities = 15/48 (31%), Positives = 21/48 (43%) Frame = -2 Query: 259 PEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHP 116 P+ P T T WPA +RP++ SP+ +AGP P Sbjct: 449 PQPPATTTPEPQPTAPPTACPTWPATVRPSEHPTTSPTGAPSAGPTGP 496
>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor| (Mu-protocadherin) Length = 845 Score = 30.4 bits (67), Expect = 2.5 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -2 Query: 259 PEGPGR-TEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGP 125 P G G T H+ ++ T Q P +P P+MG+ +SH A P Sbjct: 552 PPGVGTSTSHQPATPSGGTVQTPEPGTSQPMPPSMGTSTSHQPATP 597 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/54 (31%), Positives = 24/54 (44%) Frame = -2 Query: 286 TSGTETGRRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGP 125 TS T G P T H+ ++ T Q P +P P +G+ +SH A P Sbjct: 514 TSSTPGGS-PGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTSHQPATP 566
>HELY_MYCTU (Q10701) Probable helicase helY (EC 3.6.1.-)| Length = 906 Score = 30.4 bits (67), Expect = 2.5 Identities = 33/124 (26%), Positives = 47/124 (37%), Gaps = 6/124 (4%) Frame = -2 Query: 472 ARRDRPGEARAVTDSTAVC*GGDLIKIYQIEHAWLPVCLQECRQGNSTSDXXXXXXXXXX 293 AR R +A TD+ A GD+I I L V L+ R + Sbjct: 533 ARASRLQRRQAATDALAALRRGDIITITHGRRGGLAVVLESARDRDDPRPLVLTEHRWAG 592 Query: 292 XGTSGTETGRRPEG----PGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSH--SAA 131 +S +G P G P R EHR + R + + + LR A + P++ S A Sbjct: 593 RISSADYSGTTPVGSMTLPKRVEHR----QPRVRR-DLASALRSAAAGLVIPAARRVSEA 647 Query: 130 GPVH 119 G H Sbjct: 648 GGFH 651
>FTSZ_AGRTU (O30992) Cell division protein ftsZ| Length = 583 Score = 30.0 bits (66), Expect = 3.3 Identities = 17/48 (35%), Positives = 26/48 (54%) Frame = -2 Query: 238 EHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPEEVS 95 + R S+ + E PA LRPAQP + + A PV+ +PE+V+ Sbjct: 397 DFRPQSKLFASSPAEAPAALRPAQPVQQAAPAPVAQAPVY-HAPEQVA 443
>CY1_PARDE (P13627) Cytochrome c1 precursor| Length = 450 Score = 30.0 bits (66), Expect = 3.3 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Frame = -2 Query: 283 SGTETGRRPEGPGRTEHRASSEEARTEQ--GEWPACLRPA-QPAMGSPSSHSAA--GPVH 119 + TE P E +A++EEA E+ E PA PA +PA +P+ +AA P Sbjct: 95 AATEEPDAEAEPAAEEAQATTEEAPAEEPAAEEPAAEEPAEEPAADAPAEEAAAEEAPAE 154 Query: 118 PKSPEE 101 P++ E Sbjct: 155 PEAAAE 160
>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)| (Trio-associated repeat on actin) Length = 2014 Score = 30.0 bits (66), Expect = 3.3 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 11/66 (16%) Frame = -2 Query: 265 RRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPA-----------MGSPSSHSAAGPVH 119 R+ E PG + R R Q + R + PA P+ S GP H Sbjct: 980 RKSEAPGAFQTRDEGRSQRPSQAQ-SQLRRQSSPAPSRQVTKPSAKQAEPTRQSRTGPPH 1038 Query: 118 PKSPEE 101 PKSP++ Sbjct: 1039 PKSPDK 1044
>PLCB3_HUMAN (Q01970) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| beta 3 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (Phospholipase C-beta-3) (PLC-beta-3) Length = 1234 Score = 30.0 bits (66), Expect = 3.3 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = -2 Query: 253 GPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAG 128 GP + E++ + E A P+ P +GSPSS S G Sbjct: 477 GPDSAGRKRPLEQSNSALSESSAATEPSSPQLGSPSSDSCPG 518
>KKA8_ECOLI (P14509) Aminoglycoside 3'-phosphotransferase (EC 2.7.1.95)| (Kanamycin kinase, type VIII) (Neomycin-kanamycin phosphotransferase type VIII) (APH(3')VIII) Length = 271 Score = 30.0 bits (66), Expect = 3.3 Identities = 12/32 (37%), Positives = 17/32 (53%) Frame = +1 Query: 7 TEDSSRISWFMGTVSVVQVADPIRWPNSPWRL 102 T++ R+ W G +SV V +R PN W L Sbjct: 66 TDEMVRLRWLAGHISVPSVVSFVRTPNQAWLL 97
>POLR_TYMVA (P20128) RNA replicase polyprotein (EC 2.7.7.48)| Length = 1844 Score = 29.6 bits (65), Expect = 4.3 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = -3 Query: 156 AHPLHILQQVRFIPSHLKKSPR*IGPSNGVGHLHDRHSPHEPA 28 A P H LQ + +P+ L P IGP LH R P A Sbjct: 720 APPTHPLQSSQLLPAPLTNDPTAIGPVLPFEELHPRRYPENTA 762
>IL4RA_MOUSE (P16382) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)| (CD124 antigen) [Contains: Soluble interleukin-4 receptor alpha chain (IL-4-binding protein) (IL4-BP)] Length = 810 Score = 29.6 bits (65), Expect = 4.3 Identities = 21/61 (34%), Positives = 27/61 (44%) Frame = +3 Query: 93 LETSSGDLG*TGPAAECEEGEPMAG*AGLKHAGHSPCSVLASSEEALCSVLPGPSGRRPV 272 LE +G LG + A C +G A + A C + SEEA C V PS P+ Sbjct: 419 LEAENGGLGQSALAESCSPLPSGSGQASVSWA----CLPMGPSEEATCQVTEQPSHPGPL 474 Query: 273 S 275 S Sbjct: 475 S 475
>ITSN1_XENLA (O42287) Intersectin-1| Length = 1270 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -2 Query: 247 GRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPEEVS--KVNWA 80 G+T ++ R + E+P+ +PA P+ H A PV P + S NWA Sbjct: 778 GKTGWFPANYAERMPESEFPSTTKPAAETTAKPTVHVAPSPVAPAAFTNTSTNSNNWA 835
>IF2_BORPE (Q7VYR2) Translation initiation factor IF-2| Length = 997 Score = 29.6 bits (65), Expect = 4.3 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -2 Query: 265 RRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPE 104 R P + A +EEA E A PA+P P+ +AA PV P E Sbjct: 97 RDPAELAAEQAAARAEEAAAEAVPAEAAPAPAEPVRAEPAVETAAKPVEPPVAE 150
>IF2_BORBR (Q7WHG2) Translation initiation factor IF-2| Length = 997 Score = 29.6 bits (65), Expect = 4.3 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = -2 Query: 265 RRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPE 104 R P + A +EEA E A PA+P P+ +AA PV P E Sbjct: 97 RDPAELAAEQAAARAEEAAAEAVPAEAAPAPAEPVRAEPAVETAAKPVEPPVAE 150
>FOXE1_HUMAN (O00358) Forkhead box protein E1 (Thyroid transcription factor 2)| (TTF-2) (Forkhead-related protein FKHL15) Length = 376 Score = 29.3 bits (64), Expect = 5.6 Identities = 19/50 (38%), Positives = 24/50 (48%) Frame = -2 Query: 274 ETGRRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGP 125 E G P GPG + AS+ T G PA A+PA S + + AGP Sbjct: 238 ELGPAPSGPGGSCAFASAGAPATTTGYQPAGCTGARPANPSAYAAAYAGP 287
>RS19_AERPE (Q9YF74) 30S ribosomal protein S19P| Length = 145 Score = 29.3 bits (64), Expect = 5.6 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = -3 Query: 303 EWVSVEHRGRKLAVDRKVRVERNTELLPRRRERSKVNG 190 EW +RGR L K+ +E L P R+ RS + G Sbjct: 9 EWKKFRYRGRTLEELLKMDIEELARLFPARQRRSLLRG 46
>ROBO3_HUMAN (Q96MS0) Roundabout homolog 3 precursor (Roundabout-like protein 3)| Length = 1386 Score = 29.3 bits (64), Expect = 5.6 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 1/96 (1%) Frame = -2 Query: 478 SVARRDRPGEARAVTDSTAVC*GGDLIKIYQIEHAWLPVCLQE-CRQGNSTSDXXXXXXX 302 S R+R GE +AV AV + ++ E AWLP +G TS Sbjct: 1292 SSLERERSGERKAVQ---AVPLAAQRV-LHPDEEAWLPYSRPSFLSRGQGTS----TCST 1343 Query: 301 XXXXGTSGTETGRRPEGPGRTEHRASSEEARTEQGE 194 + G+ + R GPGR+ R+ S G+ Sbjct: 1344 AGSNSSRGSSSSRGSRGPGRSRSRSQSRSQSQRPGQ 1379
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 29.3 bits (64), Expect = 5.6 Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 8/64 (12%) Frame = -2 Query: 247 GRTEHRASSEEARTEQGEWPACL--------RPAQPAMGSPSSHSAAGPVHPKSPEEVSK 92 G AS E+ +++ PA L PA P+ GSPSSH HP SP S Sbjct: 247 GTNTSGASECESVSDKAPSPATLPATSSSLPSPATPSHGSPSSHGPPA-THPTSPTPPST 305 Query: 91 VNWA 80 + A Sbjct: 306 ASGA 309
>PCL_DROME (Q24459) Polycomb protein Pcl (Polycomblike protein)| Length = 1043 Score = 29.3 bits (64), Expect = 5.6 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Frame = -2 Query: 247 GRTEHRASSEEARTEQGEWPACLRPAQP-AMGSPSSHSAAGP--VHPKSPEEVSKVNW 83 GR HR + E T G W +C R A+P M P SH P + + P K++W Sbjct: 446 GRGYHRGCTVEIVTGSGIW-SCKRCAKPMKMQQPVSHKITKPAGICRQLPYHADKLSW 502
>TIM54_NEUCR (Q9C0Q7) Mitochondrial import inner membrane translocase subunit| tim-54 Length = 425 Score = 28.9 bits (63), Expect = 7.3 Identities = 16/54 (29%), Positives = 30/54 (55%) Frame = -2 Query: 256 EGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPEEVS 95 EG TE + + E+ ++ E P RP QP + +S ++ +HP +P+E++ Sbjct: 206 EGSTSTEDKPAEEK---KEEEAPKPKRPPQPKPYNTTSDYSSETLHPLTPQELT 256
>Y1471_METMP (Q6LX81) Hypothetical UPF0348 protein MMP1471| Length = 349 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/33 (39%), Positives = 15/33 (45%) Frame = +3 Query: 183 HAGHSPCSVLASSEEALCSVLPGPSGRRPVSVP 281 H GH C SE SV+PGP R +P Sbjct: 56 HNGHKYCMDFGKSEGLFISVIPGPLERSGRGIP 88
>SLR1_ORYSA (Q7G7J6) DELLA protein SLR1 (Protein SLENDER RICE1) (Gibberellic| acid-insensitive mutant protein) (OsGAI) Length = 625 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Frame = -2 Query: 235 HRASSEEARTEQG-EWPACLRPAQPAMGSPSSH--SAAGPVHPKSPEEVSKVNWAI 77 HR + +QG +WPA L+ G P S + GP P + + +V W + Sbjct: 342 HRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKL 397
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 28.5 bits (62), Expect = 9.6 Identities = 15/58 (25%), Positives = 24/58 (41%) Frame = -2 Query: 268 GRRPEGPGRTEHRASSEEARTEQGEWPACLRPAQPAMGSPSSHSAAGPVHPKSPEEVS 95 G +P T+ R + T +G PA +PA PS+ + P P E+ + Sbjct: 3785 GLQPPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPSTATGPQPAGPPRAEQTN 3842
>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I| Length = 1794 Score = 28.5 bits (62), Expect = 9.6 Identities = 17/52 (32%), Positives = 22/52 (42%) Frame = +1 Query: 124 PDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKLCVPFYPDLPVDGQFPS 279 P + V V P +V+N PA AP P P P++PV PS Sbjct: 1449 PAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPS 1500
>RW1_HUMAN (Q92545) RW1 protein (Fragment)| Length = 1805 Score = 28.5 bits (62), Expect = 9.6 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 2/66 (3%) Frame = -2 Query: 286 TSGTETGRRPEGPGRTEHRASSE-EARTEQGEWPACLRPA-QPAMGSPSSHSAAGPVHPK 113 T G GR+ +G +++H + + EQ P P QP P S A HP Sbjct: 1193 TQGHTAGRKSKGAKQSQHGSQHHAHSPLEQHPQPPLPPPVPQPQEPQPERLSPAPLAHPS 1252 Query: 112 SPEEVS 95 PE S Sbjct: 1253 HPERAS 1258
>CY550_PARDE (P00096) Cytochrome c-550 precursor (Cytochrome c550) (Cytochrome| C2) Length = 155 Score = 28.5 bits (62), Expect = 9.6 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +1 Query: 109 VTWDEPDLLQNVKRVSPWLVELVSNMPA 192 +TW E DL++ V PWLV++ + A Sbjct: 89 LTWTEADLIEYVTDPKPWLVKMTDDKGA 116
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 28.5 bits (62), Expect = 9.6 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 8/55 (14%) Frame = -2 Query: 247 GRTEHRASSEEARTEQGEWPACL--------RPAQPAMGSPSSHSAAGPVHPKSP 107 G AS E+ +++ PA L PA P+ GSPSSH HP SP Sbjct: 247 GTNTSGASECESVSDKAPSPATLPATSSSLPSPATPSHGSPSSHGPPA-THPTSP 300 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,284,670 Number of Sequences: 219361 Number of extensions: 1456257 Number of successful extensions: 4759 Number of sequences better than 10.0: 53 Number of HSP's better than 10.0 without gapping: 4522 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4752 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
