>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0078F08, complete sequence
          Length = 165440

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                         
Query: 5     cctggtcagccttgggtgagagggtgggatgacaagaggggtcttgatggacccaagtac 64
             ||||||||||| |||||||||||||||||||||||| | ||  |||| ||||| ||||| 
Sbjct: 88007 cctggtcagccatgggtgagagggtgggatgacaagcgaggcattgaaggaccaaagtat 88066

                          
Query: 65    ggaaaccagtgat 77
             ||||| |||||||
Sbjct: 88067 ggaaatcagtgat 88079

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                            
Query: 5        cctggtcagccttgggtgagagggtgggatgacaagaggggtcttgatggacccaagtac 64
                ||||||||||| |||||||||||||||||||||||| | ||  |||| ||||| ||||| 
Sbjct: 18508692 cctggtcagccatgggtgagagggtgggatgacaagcgaggcattgaaggaccaaagtat 18508751

                             
Query: 65       ggaaaccagtgat 77
                ||||| |||||||
Sbjct: 18508752 ggaaatcagtgat 18508764

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                            
Query: 5        cctggtcagccttgggtgagagggtgggatgacaagaggggtcttgatggacccaagtac 64
                ||||||||||| |||||||||||||||||||||||| | ||  |||| ||||| ||||| 
Sbjct: 18668093 cctggtcagccatgggtgagagggtgggatgacaagcgaggcattgaaggaccaaagtat 18668152

                             
Query: 65       ggaaaccagtgat 77
                ||||| |||||||
Sbjct: 18668153 ggaaatcagtgat 18668165

>dbj|AK072911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150D09, full
           insert sequence
          Length = 835

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 63/73 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   cctggtcagccttgggtgagagggtgggatgacaagaggggtcttgatggacccaagtac 64
           ||||||||||| |||||||||||||||||||||||| | ||  |||| || || ||||| 
Sbjct: 540 cctggtcagccatgggtgagagggtgggatgacaagcgaggcattgaagggccaaagtat 599

                        
Query: 65  ggaaaccagtgat 77
           ||||| |||||||
Sbjct: 600 ggaaatcagtgat 612

>emb|Z71265.1|CEM05B5 Caenorhabditis elegans Cosmid M05B5, complete sequence
          Length = 19144

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 215 aaggtttcacttgttcccgttgagggaaatg 245
           ||||||||||||||||| ||| |||||||||
Sbjct: 389 aaggtttcacttgttccagttaagggaaatg 419

>emb|BX547933.13| Zebrafish DNA sequence from clone DKEY-87L9 in linkage group 2, complete
              sequence
          Length = 177199

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 336    atttgataatgtgatgtatgaaa 358
              |||||||||||||||||||||||
Sbjct: 160864 atttgataatgtgatgtatgaaa 160842

>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 333    taaatttgataatgtgatgtat 354
              ||||||||||||||||||||||
Sbjct: 569809 taaatttgataatgtgatgtat 569830

>emb|AL353649.12| Human DNA sequence from clone RP11-30P16 on chromosome 9, complete
             sequence
          Length = 64791

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 89    aaccattattgcagtcttaaaaataa 114
             ||||||||||||||||||| ||||||
Sbjct: 24018 aaccattattgcagtcttagaaataa 24043

>gb|AE014218.1| Streptococcus agalactiae 2603V/R section 28 of 100 of the complete
            genome
          Length = 21154

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 333  taaatttgataatgtgatgtat 354
            ||||||||||||||||||||||
Sbjct: 2626 taaatttgataatgtgatgtat 2647

>gb|AC006035.2| Homo sapiens BAC clone RP11-196O16 from 7, complete sequence
          Length = 182372

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 136    taatgcttgtgtaaataaagc 156
              |||||||||||||||||||||
Sbjct: 151693 taatgcttgtgtaaataaagc 151673

>ref|XM_625855.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd4_2690),
            partial mRNA
          Length = 5403

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 285  tttctagatctgagtttatgt 305
            |||||||||||||||||||||
Sbjct: 3896 tttctagatctgagtttatgt 3916

>gb|AC147078.2| Pan troglodytes BAC clone RP43-180L22 from 7, complete sequence
          Length = 217576

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 320    gttgcattttcactaaatttgataatgt 347
              ||||| ||||||||| ||||||||||||
Sbjct: 144471 gttgccttttcactagatttgataatgt 144444

>gb|AC116387.7| Mus musculus chromosome 18, clone RP23-37P9, complete sequence
          Length = 217116

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     gaaaccattattgcagtctt 106
              ||||||||||||||||||||
Sbjct: 112124 gaaaccattattgcagtctt 112143

>gb|AC034148.9| Homo sapiens BAC clone RP11-155B1 from 7, complete sequence
          Length = 170928

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 320  gttgcattttcactaaatttgataatgt 347
            ||||| ||||||||| ||||||||||||
Sbjct: 1351 gttgccttttcactatatttgataatgt 1324

>emb|CT025361.2| Xenopus tropicalis finished cDNA, clone TNeu099b15
          Length = 3245

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  atggttagtgatgctccatg 181
            ||||||||||||||||||||
Sbjct: 2777 atggttagtgatgctccatg 2758

>gb|AC113974.9| Mus musculus chromosome 18, clone RP23-140D3, complete sequence
          Length = 270111

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    gaaaccattattgcagtctt 106
             ||||||||||||||||||||
Sbjct: 51550 gaaaccattattgcagtctt 51531

>gb|AC090220.13| Homo sapiens chromosome 18, clone RP11-712P20, complete sequence
          Length = 194334

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    ttgggtgagagggtgggatg 35
             ||||||||||||||||||||
Sbjct: 75714 ttgggtgagagggtgggatg 75733

>gb|AC147959.18| Medicago truncatula clone mth2-11c16, complete sequence
          Length = 132878

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 294   ctgagtttatgtatgtacaa 313
             ||||||||||||||||||||
Sbjct: 50812 ctgagtttatgtatgtacaa 50793

>gb|AC129933.13| Mus musculus chromosome 1, clone RP23-234P14, complete sequence
          Length = 247595

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 91     ccattattgcagtcttaaaaataa 114
              ||||||||||| ||||||||||||
Sbjct: 106788 ccattattgcattcttaaaaataa 106765

>gb|AC022379.2|AC022379 Homo sapiens chromosome 3 clone 996C6 map 3p, complete sequence
          Length = 222542

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 6      ctggtcagccttgggtgagagggt 29
              ||||||||||||||| ||||||||
Sbjct: 184922 ctggtcagccttgggagagagggt 184899

>gb|AC023471.4|AC023471 Homo sapiens chromosome 3 clone RP11-126L9 map 3p, complete sequence
          Length = 192973

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 6     ctggtcagccttgggtgagagggt 29
             ||||||||||||||| ||||||||
Sbjct: 50460 ctggtcagccttgggagagagggt 50437

>gb|AC024910.5| Homo sapiens chromosome 3 clone RP11-380A22 map 3p, complete sequence
          Length = 207606

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 6      ctggtcagccttgggtgagagggt 29
              ||||||||||||||| ||||||||
Sbjct: 206907 ctggtcagccttgggagagagggt 206884

>dbj|AP007297.1| Lotus japonicus genomic DNA, clone:LjT02G13, TM0489a, complete sequence
          Length = 72531

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    tgagagggtgggatgacaagaggg 44
             ||||||||||||||||| ||||||
Sbjct: 30163 tgagagggtgggatgacgagaggg 30140

>dbj|AP006378.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44A10, TM0223,
             complete sequence
          Length = 101752

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 21    tgagagggtgggatgacaagaggg 44
             ||||||||||||||||| ||||||
Sbjct: 99387 tgagagggtgggatgacgagaggg 99410

>dbj|AP006074.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT40O02,
          TM0111b, complete sequence
          Length = 92724

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 21 tgagagggtgggatgacaagaggg 44
          ||||||||||||||||| ||||||
Sbjct: 65 tgagagggtgggatgacgagaggg 42

>dbj|AP004958.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT20B10, TM0135,
            complete sequence
          Length = 96988

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 21   tgagagggtgggatgacaagaggg 44
            ||||||||||||||||| ||||||
Sbjct: 3449 tgagagggtgggatgacgagaggg 3472

>gb|AC027128.5| Homo sapiens chromosome 3 clone RP11-627C1 map 3p, complete sequence
          Length = 175773

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 6      ctggtcagccttgggtgagagggt 29
              ||||||||||||||| ||||||||
Sbjct: 103116 ctggtcagccttgggagagagggt 103139


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,802,103
Number of Sequences: 3902068
Number of extensions: 3802103
Number of successful extensions: 73115
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72989
Number of HSP's gapped (non-prelim): 126
length of query: 376
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 354
effective length of database: 17,147,199,772
effective search space: 6070108719288
effective search space used: 6070108719288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)